LOCUS       DAWGBY010000001        85105 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.001, whole genome shotgun sequence.
ACCESSION   DAWGBY010000001 DAWGBY010000000
VERSION     DAWGBY010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 85105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 85105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..85105
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.001"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..2255
                     /gene="mfd"
                     /locus_tag="WHG62_000001"
     CDS             <1..2255
                     /gene="mfd"
                     /locus_tag="WHG62_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ1724195.1"
                     /translation="LKTESSLPPGKSNLHGQIQQQPAPSPVGEGWGESKAVADQSAIA
                     VITESELYQYVARSRAHNRRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLVT
                     MDLGGETNEMMLLEYSGEAQLYVPVSQLHLISRYSGQAHENVALHKLGSGAWNKAKRK
                     AAEKARDTAAELLNLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIK
                     DLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADR
                     FADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVIIDE
                     EHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKT
                     FVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLR
                     ERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVG
                     RSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQS
                     GEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHE
                     RLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGINAIDA
                     AGEAVTVTFGKNNNIDPTEIILLIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVL
                     KTLQNRCLPK"
     gene            2404..2787
                     /locus_tag="WHG62_000002"
     CDS             2404..2787
                     /locus_tag="WHG62_000002"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ1724196.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVVCLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            2809..3651
                     /gene="kdsA"
                     /locus_tag="WHG62_000003"
     CDS             2809..3651
                     /gene="kdsA"
                     /locus_tag="WHG62_000003"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ1724197.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            3666..4106
                     /locus_tag="WHG62_000004"
     CDS             3666..4106
                     /locus_tag="WHG62_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ1724198.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIVAPVLFKMLPKMQAGEIA
                     SVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSIVFMATALLSAVLSWRLSGKEAV"
     gene            4153..5439
                     /gene="eno"
                     /locus_tag="WHG62_000005"
     CDS             4153..5439
                     /gene="eno"
                     /locus_tag="WHG62_000005"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ1724199.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDAGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            5453..5731
                     /gene="ftsB"
                     /locus_tag="WHG62_000006"
     CDS             5453..5731
                     /gene="ftsB"
                     /locus_tag="WHG62_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ1724200.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(5772..6062)
                     /locus_tag="WHG62_000007"
     CDS             complement(5772..6062)
                     /locus_tag="WHG62_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ1724201.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
     gene            complement(6260..7393)
                     /gene="nrdB"
                     /locus_tag="WHG62_000008"
     CDS             complement(6260..7393)
                     /gene="nrdB"
                     /locus_tag="WHG62_000008"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ1724202.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(7454..8641)
                     /locus_tag="WHG62_000009"
     CDS             complement(7454..8641)
                     /locus_tag="WHG62_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction enzyme"
                     /protein_id="HEZ1724203.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(8638..9648)
                     /gene="dcm"
                     /locus_tag="WHG62_000010"
     CDS             complement(8638..9648)
                     /gene="dcm"
                     /locus_tag="WHG62_000010"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ1724204.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KK"
     gene            complement(9706..11985)
                     /gene="nrdA"
                     /locus_tag="WHG62_000011"
     CDS             complement(9706..11985)
                     /gene="nrdA"
                     /locus_tag="WHG62_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ1724205.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAAKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            12514..12825
                     /locus_tag="WHG62_000012"
     CDS             12514..12825
                     /locus_tag="WHG62_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ1724206.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPDHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFHSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
     gene            complement(13137..13904)
                     /locus_tag="WHG62_000013"
     CDS             complement(13137..13904)
                     /locus_tag="WHG62_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ1724207.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(13992..14819)
                     /gene="mutM"
                     /locus_tag="WHG62_000014"
     CDS             complement(13992..14819)
                     /gene="mutM"
                     /locus_tag="WHG62_000014"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ1724208.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRLDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPRCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(14871..15536)
                     /locus_tag="WHG62_000015"
     CDS             complement(14871..15536)
                     /locus_tag="WHG62_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEZ1724209.1"
                     /translation="MDSWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRRLADVGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     VAD"
     gene            15715..17691
                     /locus_tag="WHG62_000016"
     CDS             15715..17691
                     /locus_tag="WHG62_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ1724210.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            17759..18451
                     /locus_tag="WHG62_000017"
     CDS             17759..18451
                     /locus_tag="WHG62_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEZ1724211.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMIAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
     gene            18992..19303
                     /locus_tag="WHG62_000018"
     CDS             18992..19303
                     /locus_tag="WHG62_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724212.1"
                     /translation="MEYLTTTIPTHFEIERTRLADVILTKLSDDKAVKLAKQMLDEHE
                     YIESLLVNTDPSVDDVKELANALYDHIRFEERELFPIAETVLSDDELFAIYEASDENV
                     K"
     gene            19483..19731
                     /locus_tag="WHG62_000019"
     CDS             19483..19731
                     /locus_tag="WHG62_000019"
                     /inference="COORDINATES: protein motif:HMM:NF018031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724213.1"
                     /translation="MSEFEFWNELSKIIDEFHHQHPELNERIALFDLKRPKFEKVCLN
                     RVRFFTRGYQDNANRPEPVVCEPICNPISPQFLRCVEH"
     gene            19916..20518
                     /locus_tag="WHG62_000020"
     CDS             19916..20518
                     /locus_tag="WHG62_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ1724214.1"
                     /translation="MPTLSQGLPNNYIYRENGVEFGLVQIRYPEHIELLHRWMNMPHV
                     IPQWQLNKSLSELSVYFEKMLADDHQRLYLVSINGEWVGYAEVYEGARDRLSGYYTAD
                     KNDLGWHLLLAEAQAVGKGYLRAIMRLLSFFIFEHSPAKKIVGEPDASVKPYEVVAQE
                     LNYMPQYQIVMPEKTAMLYFCDKEGFYCKFAHYLNASIKE"
     gene            20523..20921
                     /locus_tag="WHG62_000021"
     CDS             20523..20921
                     /locus_tag="WHG62_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724215.1"
                     /translation="MPIFLNAIQNPNSSLPVFLLDFSGEISQDAFDDWLIAMSDLLAS
                     EQSFALIYHSRTGLTLPNNYRQIEAVWYKTHKESFFKYCKGLVRIVDDETQRQALDSP
                     AFHKAWRVPYAVVLSLTEAKAWINTKIGAV"
     gene            20921..22177
                     /locus_tag="WHG62_000022"
     CDS             20921..22177
                     /locus_tag="WHG62_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1724216.1"
                     /translation="MIISQQKNRHLLTMVALLYVAHALPLYFFNVALPAILRHQGVDI
                     RVIGMLSLLYLPWAFKFLWASYVDNYYCAKIGKRKTWLFFTQIIVVVGLFGLGFLQFS
                     ESEIVLFLSISFLVSLASATQDIAIDGYTVEQFDKSSFGLASAMQSFGVAFGSMVGGA
                     GTLWLYQRFDWQMATISLATTVVLISCSLWFLKDQDNPKHATNISKASLIRLIKRPQT
                     KWLLALIVVFRFVEAPMMAMLNPMLVDFGFSLSQIGLLFSVFGAIVGIGSALLAGVLI
                     KYIDIVRCLILFGWLRTAVYALLCLGLLYPLLGDFLPAVGLLKTGFMSLMAISVLLIL
                     SVRYLTMTALYALFMNAANPDQAGTDFTLFVCVELLVYFIGGAMSGFLVHQFGYDKLF
                     LWLAIGSGVSMLILPTLIKKFSVTDC"
     gene            22224..24478
                     /locus_tag="WHG62_000023"
                     /pseudo
     CDS             22224..24478
                     /locus_tag="WHG62_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237991.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            24572..24820
                     /locus_tag="WHG62_000024"
     CDS             24572..24820
                     /locus_tag="WHG62_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ1724217.1"
                     /translation="MKRHPTLQPLSRQHHLGLVIANKAKSVTDDDKLTHHQAFILTIA
                     GATVGFGATWRFPYLSVKTVVARMCFYSVSRCWLSASR"
     gene            24730..25026
                     /locus_tag="WHG62_000025"
     CDS             24730..25026
                     /locus_tag="WHG62_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ1724218.1"
                     /translation="MAFPVFVGENGGGAYVFLFCIAMLVIGIPMILVENVIGRRKGVN
                     ALDAFGGPMNGKPIAKIWKLVGWMGCSARSASWLITWCSAAGSSAISLILLAEI"
     gene            24957..26003
                     /locus_tag="WHG62_000026"
     CDS             24957..26003
                     /locus_tag="WHG62_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ1724219.1"
                     /translation="MAYYMVLGGWVISYIVNIIGGNLNISSPVDGVVTKGFFTEHIEN
                     SPWEIAFYTFLFVVVNQWILVKGVIGGIEKAAKYLMPLLFLFLIAMVVRNVTLPGAME
                     GITFYLKPDFSKITTELFVFVLGQVFFALSLGFGVMITLSSYLDKNENLVQTAVITAI
                     TNTIIAVLAGFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSHMWAGSVFAVIFFSLLLI
                     AALTTSLTIYEVLITTIQEKTKIRRTAAITIVLAAIFIFGNIPSILSYGPWKDVSVFG
                     KNIFDAFDYISGNILFMLTALGSALFVGFVMKDEAKDELLYKGNHTTVNIWFAYVKYL
                     VPLVILLIFISNLF"
     gene            26247..26903
                     /locus_tag="WHG62_000027"
     CDS             26247..26903
                     /locus_tag="WHG62_000027"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ1724220.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVEWHDEENVSALAEKLPAVFSGSRILLDGEDVSDGIRTEAIGMGASAVAQLP
                     KVRASLLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIETRDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            27058..28743
                     /gene="rpsA"
                     /locus_tag="WHG62_000028"
     CDS             27058..28743
                     /gene="rpsA"
                     /locus_tag="WHG62_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ1724221.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQDKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDESRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            28754..29068
                     /locus_tag="WHG62_000029"
     CDS             28754..29068
                     /locus_tag="WHG62_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ1724222.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(29419..29826)
                     /locus_tag="WHG62_000030"
     CDS             complement(29419..29826)
                     /locus_tag="WHG62_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEZ1724223.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            29974..31083
                     /locus_tag="WHG62_000031"
     CDS             29974..31083
                     /locus_tag="WHG62_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ1724224.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPAKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINKAFDLMHEGKSIRAVIHY"
     gene            31092..31919
                     /gene="fghA"
                     /locus_tag="WHG62_000032"
     CDS             31092..31919
                     /gene="fghA"
                     /locus_tag="WHG62_000032"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ1724225.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWATNYQMYDYILNELPDLVEANFSTNGKRSIMGHSMGGHGALVLALRNRK
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGEDREKWQQYDASSLIQQGYKVQGIRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQSINVRFHKGYDHSYYFIAGFIGEHIAYHAAFLK"
     gene            32455..33606
                     /locus_tag="WHG62_000033"
     CDS             32455..33606
                     /locus_tag="WHG62_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ1724226.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
     gene            33665..34090
                     /gene="ndk"
                     /locus_tag="WHG62_000034"
     CDS             33665..34090
                     /gene="ndk"
                     /locus_tag="WHG62_000034"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ1724227.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGT
                     IRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR"
     gene            34233..35327
                     /gene="rlmN"
                     /locus_tag="WHG62_000035"
     CDS             34233..35327
                     /gene="rlmN"
                     /locus_tag="WHG62_000035"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ1724228.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQESSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSRYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            35330..36091
                     /gene="pilW"
                     /locus_tag="WHG62_000036"
     CDS             35330..36091
                     /gene="pilW"
                     /locus_tag="WHG62_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ1724229.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLIGQ"
     gene            36107..37372
                     /gene="ispG"
                     /locus_tag="WHG62_000037"
                     /gene_synonym="gcpE"
     CDS             36107..37372
                     /gene="ispG"
                     /locus_tag="WHG62_000037"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ1724230.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKITLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(37429..38043)
                     /gene="clpP"
                     /locus_tag="WHG62_000038"
     CDS             complement(37429..38043)
                     /gene="clpP"
                     /locus_tag="WHG62_000038"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ1724231.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(38139..39449)
                     /locus_tag="WHG62_000039"
     CDS             complement(38139..39449)
                     /locus_tag="WHG62_000039"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ1724232.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDIFKEQAERRVSLGLILAKLVDENKLEPTEEQVKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            complement(39658..42096)
                     /locus_tag="WHG62_000040"
     CDS             complement(39658..42096)
                     /locus_tag="WHG62_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ1724233.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNSKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPSPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAGAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDNPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            42319..43530
                     /locus_tag="WHG62_000041"
     CDS             42319..43530
                     /locus_tag="WHG62_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ1724234.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            complement(43582..44064)
                     /locus_tag="WHG62_000042"
     CDS             complement(43582..44064)
                     /locus_tag="WHG62_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ1724235.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGALR
                     VDNAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            44170..44592
                     /locus_tag="WHG62_000043"
                     /pseudo
     CDS             44170..44592
                     /locus_tag="WHG62_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688963.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            44647..45393
                     /gene="pssA"
                     /locus_tag="WHG62_000044"
     CDS             44647..45393
                     /gene="pssA"
                     /locus_tag="WHG62_000044"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ1724236.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            45394..46200
                     /locus_tag="WHG62_000045"
     CDS             45394..46200
                     /locus_tag="WHG62_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ1724237.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAIMVFTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGPQTASRPLPGLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(46316..46471)
                     /locus_tag="WHG62_000046"
     CDS             complement(46316..46471)
                     /locus_tag="WHG62_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724238.1"
                     /translation="MYTGHYGGNTVWEAAASRGIGTAGDAPMPSGVKAGQSAVWKKAM
                     ESVGRRS"
     gene            complement(47046..47153)
                     /locus_tag="WHG62_000047"
     CDS             complement(47046..47153)
                     /locus_tag="WHG62_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HEZ1724239.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKIGMVVFIVD"
     gene            complement(47167..47619)
                     /locus_tag="WHG62_000048"
     CDS             complement(47167..47619)
                     /locus_tag="WHG62_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ1724240.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            complement(47636..47866)
                     /locus_tag="WHG62_000049"
     CDS             complement(47636..47866)
                     /locus_tag="WHG62_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ1724241.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            complement(47873..48175)
                     /gene="priB"
                     /locus_tag="WHG62_000050"
     CDS             complement(47873..48175)
                     /gene="priB"
                     /locus_tag="WHG62_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ1724242.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHKSWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            complement(48176..48544)
                     /gene="rpsF"
                     /locus_tag="WHG62_000051"
     CDS             complement(48176..48544)
                     /gene="rpsF"
                     /locus_tag="WHG62_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ1724243.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            complement(48700..49650)
                     /gene="trxB"
                     /locus_tag="WHG62_000052"
     CDS             complement(48700..49650)
                     /gene="trxB"
                     /locus_tag="WHG62_000052"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ1724244.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFALKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSDQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            49789..51966
                     /locus_tag="WHG62_000053"
     CDS             49789..51966
                     /locus_tag="WHG62_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ1724245.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VTFDGSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLTINIPFLIG
                     MVGMMLKGLNWTRHDWMIPPVWQFVLASIVQLWLAIPFYKSAWASIKGGLANMDVLVT
                     IGTVSIYLYSVYMLFFSSHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLG
                     LLLKLTPTQVNVQRNGEWKQLPIDQVQIGDLIRTNHGERIAADGIIESGSGWADESHL
                     TGESNPEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIAR
                     VADKAAAVFVPTVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAI
                     MVGMGKAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYYVPDSGFDED
                     ALYRIAAAVEQNAAHPLARAIVSAAQARGLEIPAAQNAQTVVGTGITAEVEGVGLVKS
                     GKAEFAELTLPKFSDGVWEIASAVTVSVNGKPIGAFALSDALKADTAEAIGRLKKHNI
                     DVYIMSGDNQSTVEYVAKQLGIAHAFGNMSPCDKAAEVQKLKAAGKTVAMVGDGINDA
                     PALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALLISQATLENIKQNLFFAFF
                     YNILGIPLAALGFLNPVIAGAAMAASSVSVLGNALRLKWVKID"
     gene            52021..53907
                     /gene="uvrC"
                     /locus_tag="WHG62_000054"
     CDS             52021..53907
                     /gene="uvrC"
                     /locus_tag="WHG62_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ1724246.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIETTITRSEAEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKNPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYCDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIIQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAITQRHLQQSNQ
                     QHRIDELAKILGMNSDGINRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKIQEAEANGESVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGELFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLGDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            54024..55429
                     /locus_tag="WHG62_000055"
                     /pseudo
     CDS             54024..55429
                     /locus_tag="WHG62_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            55551..56267
                     /gene="trmB"
                     /locus_tag="WHG62_000056"
     CDS             55551..56267
                     /gene="trmB"
                     /locus_tag="WHG62_000056"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ1724247.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGMASAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            56590..56937
                     /locus_tag="WHG62_000057"
     CDS             56590..56937
                     /locus_tag="WHG62_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724248.1"
                     /translation="MTYLKVIAISIVLYILLLQINLKMLEKRIDFLVENIDKYYQQYG
                     SYPNNFDFISTKTDFTTESYCDFWDKNIAGYGNCYFVKNDKDYTILVMGFSSKILFSS
                     HNKIKEFNSNKYD"
     gene            57346..58104
                     /locus_tag="WHG62_000058"
     CDS             57346..58104
                     /locus_tag="WHG62_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase family protein"
                     /protein_id="HEZ1724249.1"
                     /translation="MPRFPRTLPRLTAVLLLACTAFSAAAHGNHTHWGYTGHDSPESW
                     GNLSEEFRLCSTGKNQSPVNITETVSGKLPAIKVNYKPSMVDVENNGHTIQVNYPEGG
                     NTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVLYEAGKTN
                     GRLSSIWNVMPMTAGKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKT
                     YDHIDQAQAEKFTRAVGSENNRPVQPLNARVVIE"
     gene            complement(58282..60309)
                     /gene="uvrB"
                     /locus_tag="WHG62_000059"
     CDS             complement(58282..60309)
                     /gene="uvrB"
                     /locus_tag="WHG62_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ1724250.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIADLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQTIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAVDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKENLLFGAE"
     gene            complement(60638..62122)
                     /locus_tag="WHG62_000060"
     CDS             complement(60638..62122)
                     /locus_tag="WHG62_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ1724251.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVLNKDKKDKKDKK"
     gene            complement(62249..64039)
                     /locus_tag="WHG62_000061"
     CDS             complement(62249..64039)
                     /locus_tag="WHG62_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ1724252.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKSVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKAQI
                     SRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKALAV
                     QEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLEQKGNE
                     QQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEMSNL
                     TAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYSTA
                     PATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIG
                     SSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            64367..64927
                     /locus_tag="WHG62_000062"
     CDS             64367..64927
                     /locus_tag="WHG62_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ1724253.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            64929..65477
                     /locus_tag="WHG62_000063"
     CDS             64929..65477
                     /locus_tag="WHG62_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ1724254.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            65470..65925
                     /gene="ruvX"
                     /locus_tag="WHG62_000064"
     CDS             65470..65925
                     /gene="ruvX"
                     /locus_tag="WHG62_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ1724255.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(65935..66591)
                     /locus_tag="WHG62_000065"
     CDS             complement(65935..66591)
                     /locus_tag="WHG62_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ1724256.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGTGEGKDILGCVAGYGVGLDLTA
                     RDIQCRLKEKGLPWLKAKGFRHSACVSDFAAAGRIGNPENVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(66654..68366)
                     /locus_tag="WHG62_000066"
     CDS             complement(66654..68366)
                     /locus_tag="WHG62_000066"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ1724257.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLDLEFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVRSPLTMASPAAIVEQFGANGG
                     SLGPVSFAGKVYADFATEKGADWVIGANEDGYHYTSFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     LLNG"
     gene            69061..71724
                     /gene="aceE"
                     /locus_tag="WHG62_000067"
     CDS             69061..71724
                     /gene="aceE"
                     /locus_tag="WHG62_000067"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ1724258.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            71874..73442
                     /gene="aceF"
                     /locus_tag="WHG62_000068"
     CDS             71874..73442
                     /gene="aceF"
                     /locus_tag="WHG62_000068"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ1724259.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAGGATVQVAVPDI
                     GGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAVFLKVGDKVSE
                     GSAIIEVETVGSAAAAPAQAAQAAAPAAAPPPTAAAAPAAAPAPSAPAAAKIDEAAFA
                     KAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGAAKPAAAGASL
                     GSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELE
                     EFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFNIGFAA
                     DTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGG
                     TGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTV
                     FLAKLLKDFRRITL"
     gene            73536..73973
                     /locus_tag="WHG62_000069"
     CDS             73536..73973
                     /locus_tag="WHG62_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724260.1"
                     /translation="MGNFLYRGISCQQDEQNNGQLKPKGNKAEVAIRYDGKFKYDGKA
                     THGPSVKNAVYAHQIETGLYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQ
                     YSIFEYEVEHPENPNEKEVTIRAEDCGCIPEEVIIAKELIEIN"
     gene            73991..75775
                     /gene="lpdA"
                     /locus_tag="WHG62_000070"
     CDS             73991..75775
                     /gene="lpdA"
                     /locus_tag="WHG62_000070"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ1724261.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDSHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMINTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(76136..77686)
                     /locus_tag="WHG62_000071"
     CDS             complement(76136..77686)
                     /locus_tag="WHG62_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ1724262.1"
                     /translation="MKKPLISVAAVLLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYDRGWFTSTETTVIRLKPELLHNAQKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGETVYQKGFKSYRNGYDAPLFKIKLADKGDAAFEKVHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFIDSEGQFRFGTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPSGKIDVGGKIMFK
                     DLKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
     gene            complement(77810..79929)
                     /locus_tag="WHG62_000072"
                     /pseudo
     CDS             complement(77810..79929)
                     /locus_tag="WHG62_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            complement(80188..80973)
                     /locus_tag="WHG62_000073"
     CDS             complement(80188..80973)
                     /locus_tag="WHG62_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ1724263.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDIVAANPKVLAQMLKIISAHV"
     gene            complement(80983..81153)
                     /locus_tag="WHG62_000074"
     CDS             complement(80983..81153)
                     /locus_tag="WHG62_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724264.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            81217..82032
                     /locus_tag="WHG62_000075"
     CDS             81217..82032
                     /locus_tag="WHG62_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ1724265.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            82093..82950
                     /locus_tag="WHG62_000076"
     CDS             82093..82950
                     /locus_tag="WHG62_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ1724266.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            83154..83495
                     /locus_tag="WHG62_000077"
     CDS             83154..83495
                     /locus_tag="WHG62_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724267.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            83843..85099
                     /locus_tag="WHG62_000078"
     CDS             83843..85099
                     /locus_tag="WHG62_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ1724268.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEEIEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWREEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLQNLKIDL
                     DTGKYLRLDSAKHQTDGFFAAVLQRK"
BASE COUNT        21601 a        22436 c        20184 g        20884 t
ORIGIN      
        1 acctgaaaac cgaaagcagc ctgccccccg gtaaaagtaa tctgcacggg caaatccaac
       61 agcaacctgc cccctccccc gtgggggagg gttggggaga aagcaaagcg gttgccgacc
      121 aaagtgccat cgccgtcatc accgaatccg agctctacca atacgtcgcc cgttcgcgcg
      181 cccacaaccg ccgcaagaaa cacgccgccg tttcagacgg tctgttgcgc gaccttgccg
      241 aaatcaatat cggcgatccc gtcgtgcacg aagaacacgg catcgggcgg tatatgggct
      301 tggtcacaat ggatttgggc ggcgaaacca acgaaatgat gttgctcgaa tactcgggcg
      361 aagcgcagct ttatgtgcct gtttcgcaac tgcatttaat cagccgctac tccggtcagg
      421 cgcatgagaa cgtcgccttg cacaagctcg gcagcggcgc gtggaacaag gcgaagcgca
      481 aagccgccga aaaagcgcgc gacaccgccg ccgaattgct caacctctac gcccaacgcg
      541 ccgcccaatc gggacacaag tttgaaatca acgagttgga ctatcaggcg tttgccgacg
      601 gcttcggcta cgaggaaacc gaagaccagg ccgccgccat cgccgccgtg attaaagatt
      661 tgacgcaggc gaagccgatg gaccgcctcg tgtgcggcga tgtcggtttc ggcaaaaccg
      721 aagtcgccct gcgcgccgca tttgtggcgg tgatgggtgg caaacaggtc gccgtactcg
      781 ccccgaccac gcttctggtc gagcagcacg cgcaaaactt tgccgaccgt ttcgccgatt
      841 tccctgtgaa agtcgccagc ctttcgcgtt tcaacaacag caaagccact aaagccgcgc
      901 tggaaggcat ggcggacggc acggtcgaca tcgttatcgg cacgcacaaa ctggtgcagg
      961 acgacatcaa attcaaaaac ttaggtttag tgattatcga cgaagaacac cgcttcggtg
     1021 tccgccaaaa agagcagctc aaacgcctgc gcgccaatgt ggacatcctc accatgaccg
     1081 ccacgccgat tccgcgtact ttaagtatgg cgttggaagg actgcgcgac ttctcgctga
     1141 ttaccaccgc gcccagccgc cgcctcgccg tcaaaacctt tgtcaaaccc tttagcgaag
     1201 gcagcgtgcg cgaagccgta ttgcgcgaac tcaaacgcgg aggacaggta tttttcctgc
     1261 acaatgaagt agatacgatt gaaaatatgc gcgagcggct ggaaaccctg ctgcccgaag
     1321 cccgcatcgg cgtggcgcac ggacaactgc gcgagcgcga gctggaacaa gtcatgcgcg
     1381 actttttgca gcaacgattt aacgtgttgc tctgctccac catcatcgaa accggcatcg
     1441 acatccccaa cgccaacacc atcatcatca accgcgccga caaattcggg ctggcgcaac
     1501 tgcaccagct tcgcgggcgc gtcggccgca gccaccatca agcctacgcc tacctgctca
     1561 cgcccgaata catcaccaaa gacgcagaaa aacgcctcga cgccatcgcg gcggcagacg
     1621 aactcggcgc aggtttcacc ctcgccatgc aggatttgga aatccgcggc gcaggcgaaa
     1681 tcctcggcga agggcagtcc ggtgaaatga tgcaggtcgg cttcacgctc tacaccgaaa
     1741 tgctcaaaca ggccgtgcgc gacctcaaaa aaggccgcca acccgacctc gatgcaccgt
     1801 tgggcattac caccgaaatc aaactgcaca gccccgccct gctgcccgaa agctactgcc
     1861 ccgacatcca cgaacggctc gtcctctaca aacgcctcgc cgtctgcgaa accgtacagc
     1921 aaatcaatgc catacacgaa gaactcgtcg accgcttcgg actgcccgag caacccgtca
     1981 aaacccttat cgaaagccac cacttacggc ttatggcaaa agaattgggt atcaatgcca
     2041 ttgatgcggc cggcgaagcg gtaacggtaa cctttggcaa aaacaacaat attgatccaa
     2101 ccgaaatcat cctgctgatt cagaacgaca aaaaataccg ccttgccggc gccgataagc
     2161 tgcggtttac cgcagagatg gaaaatatcg aggtcagaat caacaccgta aaaaacgttt
     2221 taaaaacctt gcaaaacaga tgcctgccca aataaagccg acaccgcaat gctgtctgaa
     2281 acaccgtttt ccttgtccga aagccgccat tatgaatttg aaggaaactc cactataata
     2341 cggcattcag attttcagac ggcatcgcgc ccgtcaaacc gcacacaaac caaaaggaaa
     2401 tacatgttcc gtactatgct tggcggaaaa atccaccgcg ccaccgttac cgaagccgat
     2461 ttgaactacg tcggcagtat taccgtcgat caagacctgt tagacgcagc aggcatctac
     2521 cccaacgaaa aagtcgccat cgtcaacaac aacaacggcg aacgttttga aacctatacc
     2581 atttcaggca aacgcggcag cggcgtggtc tgcctgaacg gggcggcggc caggctggta
     2641 cagaaaggcg atatcgtcat catcatgtct tacgtccaac tctccgaacc cgaaatcgcc
     2701 gcacacgaac ccaaagtcgt cttggtagac ggaaacaaca aaatccgcga catcatctcc
     2761 tacgagccgc cgcacaccgt gctgtaaccc tgaaaacgga cattgaccat ggatattaaa
     2821 atcaacggca ttaccgtcgg taacgatgct cctttcgtac tgttcggcgg catcaacgtt
     2881 ttagaagatt tggattccac cctccaaacc tgtgcgcatt acgtcgaagt tacccgaaaa
     2941 ctcggtattc cctatatctt taaagcctct ttcgacaagg caaaccgttc ctccatccat
     3001 tcttatcgcg gcgtaggctt ggaagaaggc ttaaagattt ttgaaaaagt caaagcagag
     3061 ttcggcatcc ccgtcattac cgacgtacac gaaccccatc agtgccaacc cgtcgccgaa
     3121 gtgtgcgatg tcatccagct tcccgccttt cttgcgcggc agaccgattt ggtggccgca
     3181 atggcggaaa cgggcaatgt catcaacatc aaaaaacccc agttcctcag cccttcgcaa
     3241 atgaaaaaca tcgtggaaaa attccgcgaa gccggcaacg ggaaactgat tttatgcgaa
     3301 cgcggcagca gcttcggcta cgacaacctc gttgtcgata tgctcggttt cggcgtgatg
     3361 aaacaaacct gcggcaacct gccggttatt ttcgacgtta cccattccct gcaaacccgc
     3421 gatgccggtt ctgccgcatc cggcggtcgt cgcgcacagg ctttggattt ggcacttgca
     3481 ggcatggcaa cccgccttgc cggcctgttc ctcgaatcgc accccgatcc gaaactggca
     3541 aaatgcgacg gccccagcgc gctgccgctg caccttttag aagatttttt aatccgcatc
     3601 aaagcattgg acgatttaat caaatcacaa ccgattttaa caatcgagta acacggtttc
     3661 gccttatgat gcagactttc cgaaaaatca gcctgtatgc cgcaaccttg tggctcggta
     3721 tgcagattat ggcgggttat atcgtcgcgc cggtgctgtt caaaatgctg cccaaaatgc
     3781 aggcgggcga aattgccagc gtattgttcg acatcctctc ttggagcggg cttgccgttt
     3841 ggggcgcggt actggctgcc gcctttgccg ccctaacccg gcggcaaacc gccctgctgc
     3901 tttttttatt gtccgccctt gccgccaacc gattcttgat tacacccgtt atcgaggcgc
     3961 tgaaatacgg gcatgagaat tggctgttgt cgtttgtagg cggatccttc ggaatgtggc
     4021 acggcatttc cagtattgtt tttatggcaa ccgccctact ttcagcagtt ttaagttggc
     4081 ggctttccgg caaagaggcc gtctgaagcc ctcccatttt ttacctccct tcacttcact
     4141 tggagaacat tcatgagcgc aatcgttgat attttcgccc gcgaaatttt ggactcacgc
     4201 ggcaacccca cagtcgagtg tgatgtattg ctcgaatccg gcgtaatggg acgtgcagcc
     4261 gtaccgagcg gtgcgtccac cggtcaaaaa gaggctttgg aactgcgcga cggcgacaaa
     4321 tcccgttatt cgggcaaggg cgtattgaag gcggtcgaac acgtcaacaa ccaaatcgcc
     4381 caagccctca ttggtatcga tgccagcgaa caatcttata tcgaccaaat catgatcgaa
     4441 ttggacggta ctgaaaacaa aggtaacttg ggtgccaacg cgactttggc cgtttctatg
     4501 gccgtagcac gcgcagccgc tgaagatgca gggctgccgc tttaccgcta cttgggcggc
     4561 gcaggtccga tgtccctgcc cgtaccgatg atgaacgtca tcaacggcgg cgaacacgcc
     4621 aacaacagcc tgaacatcca agagtttatg attatgcccg tcggcgcaaa atctttccgc
     4681 gaagcgttgc gctgcggtgc ggaaattttc cacgccttga aaaaactgtg cgacagcaaa
     4741 ggcttcccga ccacagtcgg cgacgaaggc ggtttcgccc ccaacctgaa cagccacaaa
     4801 gaagccctgc aactgatggt cgaggcgacc gaagccgccg gctacaaagc gggcgaagac
     4861 gtattattcg cattggactg cgcctccagc gagttctaca aagacggcaa ataccacttg
     4921 gaagccgaag gccgctccta caccaacgcg gaatttgccg aatatctgga aagtctggtc
     4981 aacgagttcc ccatcatctc catcgaagac ggcatggatg aaaacgactg ggaaggctgg
     5041 aaactgctga ccgaaaaact gggcggcaaa gtccaactcg ttggcgacga cctcttcgtt
     5101 accaacccga aaatccttgc cgaaggcatt gaaaaaggcg tggcaaacgc actattggtc
     5161 aaagtcaacc aaatcggtac tttgagtgaa accctgaaag ccgtcgatct ggcaaaacgc
     5221 aaccgctacg ccagcgtgat gagccaccgc tccggcgaaa ccgaagacag caccattgcc
     5281 gacttggcag tcgccaccaa ctgtatgcag atcaaaaccg gttctttgag ccgttccgac
     5341 cgcatggcga aatacaacca actgctgcgt atcgaggaag aattggcgga agccgccgac
     5401 taccccggca aagccgcatt ctaccaactg ggcaaataaa aaaggttaag gtatgaagtg
     5461 ggtaactgtc gttttatcct tcgcacttgt ctgttgccaa tacagcctct ggttcggcaa
     5521 aggcagcatc ggacgcaaca gcagtctgag agaacagatt gccgttcaag aagaaaaaaa
     5581 ccagacactc gccctacgca atcattccct tgccgccgaa gtctatgatt tggaaaacgg
     5641 tcaagaagcc atttcggaaa tcgcccgggt agaactgggt tatatccaag acggtgaaac
     5701 cttttaccga ctcatcaggc ataaccggta ataccgtcaa aaagccgtcc gaaccaatgt
     5761 tcggacggct tttatttcaa caaactgtca gacagcccct catcctcccc cgacaaaccg
     5821 caatccagcc tgacatcccc ctcgacgcaa cagcagcacg gcagtatctc gtcccgcccc
     5881 aaaaaagcca aaggcggctc ccgataagta acgcttccct ccaaaatctt cactcggcac
     5941 gatccgcaat atccgcttcg gcactgatat tccaccatat gccccgtccg ttccaagcct
     6001 tccaacaggg tctcgccctc caagagctca aaaaaaccct tattcgtacc aatgcgcgcc
     6061 atttccgacc aatcaaaaat atagtggatt aaatttaaac cagtacggcg ttgcctcgcc
     6121 ttgtccggat ttttgttaat ccactataat ccactataaa aggaacaata accgatccta
     6181 cccgctgttt ttcccatcat acaacataca aatgccgtct gaaacatccg gcttcagacg
     6241 gcattttttc aaaaaacatt tacaactcaa aatcgcccaa atcatccgta ttcacttcag
     6301 aatctatctg accgatcaaa taagaggata tttccacttc ctgcggcgcg acctgtacgt
     6361 tgtcggacga cagccacgca ttaatccacg gaatcgggtt ttgatttgcg ccttcaaatc
     6421 cggccggcaa ccccaccgcc tgcatacgca gattggtaat atattcgacg tattgggata
     6481 agatttcttt gttcaaaccg atcatcgaac cgtccttaaa caaatatgcc gcccattctt
     6541 tttcctgttc cgccgctttt ttgaagagtt ggaaacattc gtcctgcaac tcggcggcaa
     6601 tttccgccat ttcagaatca tcaacaccag aacgcatcag attaagcata tgctgcgtgc
     6661 cggtcaggtg cagggcttcg tcgcgggcaa tcagtttgat gattttggcg ttgccttcca
     6721 tcaactcgcg ctcggcaaaa gcaaacgagc aggcgaatga aacgtagaaa cggatggctt
     6781 ccaacacatt gacgcacatc aggcagagat agagtttttt cttcaacccg cgcaaagaca
     6841 cggtaacggg tttgccgccg acattgtgca ccccttcgcc caacaggttg taatactggg
     6901 tgtattcgat taagtcatcg taatagcagg caatgtcttc ggcgcgggcg gtaatgtatt
     6961 cgttttcgac aatatcatca aacacgaccg acggatcatt cacaatattg cggatgatgt
     7021 gggtatagct gcgcgagtgg atggtttcgc tgaagctcca cgtttcaatc cacgtttcca
     7081 actcgggaat cgaaaccaaa ggcagcaaag caacattcgg actgcgccct tggatggaat
     7141 cgagcagtgt ttggtatttc agattgctga tgaaaatatg tttttcgtgt tctggcaggt
     7201 tggcgtagtc gatacggtcg cgcgacacgt cgatttcttc cggccgccaa aaaaacgaca
     7261 attgtttttc aatcagtttt tcaaatacct cgtatttctg ctggtcataa cgggcgacat
     7321 taaccggctg accgaaaaac atcggctcat tcagcgcgtc gtttttggtt ttgggaaagg
     7381 tgctgtatga catagttaag tgttcgcagg acataatcta ttctctatat taattaaaaa
     7441 tgatctgtaa gttttaacta acctgctgag actttatata tttaataaaa ttttctaaag
     7501 ttaaaacatg ggttttccca aaagttccaa atgtttttac ggattcttta gggacaacta
     7561 aggttaaatt ctcatcactc atttcctgaa tttgagtatc agatatacct tcttgtagag
     7621 taaataaatg cttatgagga attcgatctg cttcatttaa aacttggcgc cagcgatcct
     7681 tacaagtagt ctttgaacct agcattgtca gcttttcagt ttgaaatatg aaattccctg
     7741 attcatccat cgcatggtac tcttcacttc caggaaataa aaaatctggt ttctttttcc
     7801 cttctgtctt cgcttgcgtc tcaaatttta aggaaaattc gtcaaatatt cttgataaat
     7861 gtaactctaa agattttcct gctcttgctt ttctgcgatt tgtaaaagaa tgtgcaaaat
     7921 taatgaagct atccaaatca gtaatttttg atttaataat ttcaaattca cgtttttcaa
     7981 aaatggaaaa taattcatat tcctttgaaa cccattgttt taacacatta ctaacgttag
     8041 ttttatttaa tgcaatattt tcccttgcca aaactgccat ttcttcagtt ttggggaagt
     8101 taggaaatag tgaaaataat tttgttaggt tatcctctac ttcttgtttt ttaggtaaat
     8161 ataaacttcc tggtaaaatg ttagtttctg cgataaatat ttcaatatct tcatctgaag
     8221 ataaaacaaa agcatggaat aataaatctt tataacaagc tctgcacaat accaataagg
     8281 aaccactata tttatcactt aaaaattcaa aattcttgcc aaaacccgta attctcgcct
     8341 catttctcgt gccttggccg taatatttaa aattgctatt agtgacgctt ccatcttgcc
     8401 aattaatttt gattgaaata gttttatttg ttcccttttg gcaaactaca tcaaagaggt
     8461 cgtctgaaaa atgtttttga atataaaatc ctgattggtg actaccagta gtaccaacat
     8521 cattgggacg aatataacga cagtatactg caattgattt atttgctgtc tgtattgctg
     8581 aagctactaa gtcatcggat ttatttacta cttgtattgt ctgagctgcc aagtcattca
     8641 tttttttaac tcatttataa tttgtttagc aatagcttga accaacggta cagcaattga
     8701 attgccaaac tgcttgtatg cagctgtctt ggatactgca tcaataacaa aatctttagg
     8761 aaatcccatt aaacgcgagc actccctagg tgtcagcttc ctaggatttt ttcctttctg
     8821 agggatgagt atttcggaac catctttgta atatcgtgca gatagagttc gtgatattcc
     8881 atctaaatca actaatccaa aaccaaatcc attacccttt gccttatgtt ttttagcgta
     8941 attttgaagg taaagccata agttatcaga aagagtaaaa gaattatcta catcatcttc
     9001 caaaatttgc tttaattttg gttgtgattc tggtggggaa ggaaaattga aatttatttc
     9061 cttattaaaa tattgtctat caaaacctac aataaaaata cgctccctat tttgaggaac
     9121 ataatatttt gcattcataa cttgataaaa tatctgatag tcaagctctt ctaaagtccc
     9181 tttaattact ttaaatgtat ttcctttgtc atgcgaaaca aggtttttca cattctctaa
     9241 aagaaaaatt ttaggtcgat gttttccaat aatttcagca acatcaaaaa atagagttcc
     9301 ctgcgcctta tctaagaagc ctgtttctcg tcctaggctt tttttctttg aaacaccagc
     9361 tatagagaat ggctgacacg ggaatcctgc tgttaataca tcaaacttac ttggaatagc
     9421 tgctttggtt tcctttaatg taatatctcc ataaggaata tcattaaaat ttacttggta
     9481 ggtttgacgg gctttatcat cccattcact agaaaataca catcgcccac caacattctc
     9541 cattgcaatg cgaaaaccac ctattcccgc aaataaatca ataaaagtaa atttctcatt
     9601 atttaaggta actatattat ctaattgatt ttgtatttta tttttcatat tttatatttc
     9661 agatgattta ttaatctaaa ggccatctga aaactccccc tttcatcaaa tcttacaagc
     9721 cccgcccgcg cagccgtcat cctgaatatc ggtctgcgta tcgtccgcac cgtcgcgggt
     9781 gttatggtag tacagggttt tgacgccgta tttgtaggcg gtcagcaggt ctttgagcat
     9841 ttgtttcata gaaactttgc cgccttcgaa tttgcccggg tcgtaggcgg tattggcgga
     9901 aatcgattga tcgacgaatt tttgcatcac gccgacaagt ttcaggtagc cttcgttgcc
     9961 gggaagctgc cacagggttt cataggcatt tttcagggtt tcaaactccg gcacgacttg
    10021 tttcaaaatg ccgtctttcg atgctttgac cgttaccaat ccgcgcggcg gctcgatgcc
    10081 gttggtggcg ttggcgattt gagagctggt ttcagacggc atgagcgcgg tcagagtaga
    10141 gttgcgcagg ccgtatttga cgatttcggc acgcaggctt tcccagtcgt aatgcaaagg
    10201 ctcgccgcag acggcatcca aatctttttt gtaggtgtcg atgggcagtt tgccttgcga
    10261 ataaacggtt tggttaaaga gcgtacacgc accgtattct ttggcaaggt ttgccgatgc
    10321 tttgagcagg taatactgta tggcttcaaa ggtacggtgg gtcagaccga gcgcggagcc
    10381 gtcgctgtag cggacaccgt ttttcgccag ataataagca tagttaatca cgccgatacc
    10441 gagcgaacgg cggcccatag tggaggtacg cgcggcttct accggatatc cctgataatc
    10501 taaaagtgca tcgagtgcgc gcacagtcaa atcggcaagc ccttccaatt cgtccaggct
    10561 gtttaatgcg cccaagttga aggcggacag ggtacacagg gcgatttcgc cgttcggatc
    10621 gttgatattg tccagcggtt tggtcggcag ggcgatttcc atacacaagt tggactgatg
    10681 aacaggcgcg acgcgcggat cgaacgggct gtgcgtattg cagtgatcga cgttttgaat
    10741 gtagatgcgc ccggttccgg cacgctcctg catcagcgtg gaaaacaggt cggcagccgg
    10801 aatgatgcgc ttgcggatat cagggtcttg ctcgtatttc gtatagagcc gctcaaattc
    10861 gtcttggtcg gcaaaaaacg cttcgtacaa tcccggaacc tcgttgggcg aaaacagcgt
    10921 aatgttgccg cccttaatca ggcgggtgta cagtaggcgg ttgatttgca caccgtaatc
    10981 aagctggcgg atacggttgt cttccacgcc ccggttgttt ttcaacacca gcaggctttc
    11041 ggcttcgata tgccacaagg ggtagaacaa ggttgccgcg ccgccgcgca cgccgccttg
    11101 cgaacaggat ttgaccgccg cctgaaacat tttgaaaaac gggatgcagc cggtatgccg
    11161 cgcttcgccg ccccggattt cgctgtccaa accgcggata cgtccggcat tgatgccgat
    11221 gcccgcacgc tgggaaacgt atttcacaat cgcgctggta gtggcattga tggaatccaa
    11281 actatcgtcg cattcaatca gcacacagct tgagaactgg cgcgtaggcg tacgcacgcc
    11341 gctcataatc ggggtcggca gcgatacttt aaatgtggaa acggcatcgt aaaaccgttt
    11401 gacgtaatcg aggcgtgttt ctttgggata tttgctgaaa agacacatcg ccaccagaac
    11461 atataagaac tgcggtgttt cataaatctg gcgggtaacg cggttctgta ccagatattt
    11521 gccttcgagc tgtttgacag cggcatagga aaaggacata tcgcgttcgt ggtcgatata
    11581 ggcgttcagc tcgtcaaatt cttcgcggct gtaatcctca aggatatgcc tgtcgtattt
    11641 tgcggcatcg gtaagttttt taacgtggtc gtaaaggtgc ggcggctcgt actcgccgta
    11701 ggctatttta cgcagatgga aaatcgccaa acgcgcggca aggtattggt agtccggggt
    11761 atcttccgaa attaaatcgg cagcggcttt gatgatggtt tcgtggatgt cgtcggtgcg
    11821 gatgccgttg tagaactgga tgtgcgattt caactcgacc tgagatacgg aaacattttc
    11881 caatccgtcc gccgcccaag tgacgacacg gtgaatctta tccaaatcaa tggcttctaa
    11941 tcttccgtct cgtttggtta ctttcaaatc agtcggtgta ttcatcgctt cctcttccac
    12001 tcttgatatt caagacacgg tcttttcaaa taaattaagg cagacaatat agtggatttt
    12061 tggcattttc tccagtcttg acaacggttg tatttttcag tttcaggcaa tgcgcgataa
    12121 aacccgcctg tcgtattttt cctataatat ttgttttatc tgataattct ttaccgataa
    12181 aaaacgggta aattttttgc cttttgaccg gctccggcta caaggcggtg aaataaggat
    12241 tttccgacga aaaaggaaag cttcctgttt tctgcccctg caaattgtta aattttgcaa
    12301 agtatgattt tgccgcgccg ccgccgacaa attccatttt cttaccgatt ggaatttatt
    12361 attgagatta atgtgttatt tgaatctgca tatcaaacgg caagttttgt cggctgaatg
    12421 agtctgaaac tgccgacaat ttgcccgctc catccttcca tcctatactg gaaggaatga
    12481 caaactgaaa ggatcgtcat gtctgtcaaa aagatgcttg ccatactgtt gtctgcaata
    12541 ttgggactgg tatcgacaac tgccgctgcc ggtacgtcag aacccgacca ccgcgatacc
    12601 aaacatatcc gcaaggcaaa caagcagatg ctgcaccccg aatgcaggaa atatttggaa
    12661 cgccgtgccg cgtggtaccg atcgcaaggc aacgtgcagg aattgcgcga aaacaaaaag
    12721 gcgcgcaaag cattccactc cctgccttat gcggaacaga aaatccaatg ccgggcggct
    12781 tatgaggctt tcgatgattt cgacggcggc agtttccgcc gttaatccca tataaaatat
    12841 gccgtctgaa cacaggttca gacggcattt tccatagata caacaaacta tccttacgcc
    12901 atttcgtttg aggtcctccc gttgccgcag ccttaatata gtggattaac aaaaatcagg
    12961 acaaggcgac gaagccgcag acagtacaga tagtacgaaa ccgattcact tggtgcttca
    13021 gcaccttaga gaatcgttct ctttgagcta aggcgaggca acgctgtact ggtttaaatt
    13081 taatccacta tacatccaca aaagcgaatc atactgccac attccgacaa ccggtttcag
    13141 acagcgatat ccgcatcgtc ggcgacaacg gcacggatgc tttcttcgat tttatctttt
    13201 aaagcataac ggtcttcgct ttccgccgca tccgccacgc aaacgaaatc gacttttatc
    13261 gtcaattttt tcatagacac gatgcgccac aggcaggtcg gcaaaccgac atcggcatat
    13321 gagggacgag ccgtcctttt tcccgtttcg tcataataac gcagcgcgac cgccaaaacc
    13381 tttgcccccg catcgatggc ggattggaac agcgcggctt tgaacggcaa aagccccaat
    13441 ccggaggaag tccgcgcttc ggggaaaaaa ctgacgtttt gaccgcgttg caaggtttcg
    13501 cagacggcgc ggttaatcgg ttcgatgtcg cgccgcgaat tgcggttgat gaacaccgtt
    13561 cccgcgttct gccccatctt gcccaatacc ggccagcttt tgatttcctg cttggcgata
    13621 aagctgctcg gataaaccgc gctcatcgcg aaaatatcca gccaggacac gtggttggcg
    13681 gcaaccaaga caccgttcgg atgttcgggt gcgggtctgc ccacctccaa tccgatatcc
    13741 aaagccgcca aaacccccct gcccaactcg attaccgccc gattgcgcga ctcggggcaa
    13801 ccgccgtcaa taccgcgcag gtttttcccg gttttgaaca gccagaccgc caaacggcac
    13861 aagcggcgca gacgtgtaaa aaatgaagct ttatttgaag acatgagcaa ttctttcccg
    13921 ataatcggtg tttgttgttg aaacgttcgg acggcatacc gataaaatgc cgtctgaaac
    13981 cgttttcagt cctatttctg acagttcggg caataaaacg tgccgcgctg ccccaaagtt
    14041 tctttcacaa ccaaaccgcc gcaccggggg cacggctgat tgtgccgccc gtacactgta
    14101 tattcctgtt ggaagtagcc gcttttgccg tcgctgtcca caaaatccct caaggtactg
    14161 ccgcccgttt caatggcgcg ctgcaacacc gctttgacgg tttcaaccaa aagcgcgcac
    14221 tctttctttt tcaggcggtt ggcaggacgg tggggcgaaa tgcccgctct gaacaggctc
    14281 tcgttggcat aaatgttgcc cacaccgacc acgaccgcat tgtccatcag ggcaagtttg
    14341 accgcgcgct tctgcgcctt cagccttgca tacagataat ccgcacaaaa tgcctccgac
    14401 aaaggctccg gccccagttt ttccaacagc ggatgatgtt cttcgattcc ctcataccaa
    14461 agtatcgcgc cgaactttct cggatcgcgg taacgcatga ccgtgccgtc tgaaaacaca
    14521 atatcgacgt gatcgtgtct gtccagcctg ccgatacgtc cgtccgacgg cgtaaaaatc
    14581 cgcaagctgc ccgacatccc caagtgaatc agcaaaatcc ccgtttggaa acggacaatc
    14641 agatatttgg cacgcctgcc gcaggacaaa acctgccgac cggacaaaat ctcccccaaa
    14701 tcgggattga tctgccagcg cagcttcaat tggcgcaata ccacggcttc caccgttttc
    14761 ccttcaatat gcggcgcgat gccgcgcaac gtcgtttcca cttccggcaa ttcaggcata
    14821 acccctcccg acatttcttc tgacagatgc cgtctgaaag acggctgtcc ctaatccgca
    14881 acccttgccg cacccgccgc aagggctttg ccgcccaaat acccgtccca cgcgggcagg
    14941 ggcgttacgc ccgccgccct tttgaccaaa accaaaccgt acactgcggc acactgcggc
    15001 caccaacggt cgcccgcctt ttccataaac cgccaaaagc gtatttgccc gagcgacgaa
    15061 acgggcggca gatacaccat aaatttccca aattcaatat cgaaaccgac atccgcaagc
    15121 cgccttttca actcgggcag cggcagacag aagcgttttt ccggcaggcg ttcgccgtca
    15181 aaccaacggc tgaatcccca gagcgaatac ggattgaaac ccgtcagcat caaacgtccg
    15241 gacggtttca atatccggtg cgcctcggac aggatttgcg aaggaacacc gccttcaagc
    15301 gtatgcggaa aaagcagcat atccgcagaa acatccgcca aagccatatt ttccgccgac
    15361 atcgacatat ctcgcggcac acagacaaca tcttcagaca ggctcagcca cggaccgccc
    15421 acctgaaccg cacacattcc cgaaaaacgg tatgaatcca gataccgccc gaagaaatcc
    15481 tgttccaatt ttgcaacata ccgccccatc gccgtatctt caaaccatga atccatattg
    15541 cgtccgtttc aaacagattg cctgccgata ttctattcca aacaggattt ctgtcaaaaa
    15601 acacatcggc cgcccatttc cgaatccgca taaagttcct gtaaaacttg acgctttttc
    15661 agtcaaacag taccatcgga cgataaaata tgtttattcc gccgaatata aatcatgtcc
    15721 aaactcaaaa ccatcgctct gaccgcatca ggtctgtccg tttgtccggg tttcctatac
    15781 gcccaaaaca cctcatcaca ccaaatcggt ttggcgatta tgcgcttaaa ctcttcaata
    15841 ctcgacctgc ccccgacaaa acaatatttc caatccggca gcctgtggag cgagctgcgc
    15901 caaggcttcc ggatgggcga agtcaatccc gaactggtac gccgccacga aagcaaattc
    15961 atcgcaagcc acagctattt caacagggtc atcaaccgga gtagacccta tatgtaccat
    16021 atcgccaacg aagtcaaaaa acgcaatatg cccgccgaag ccgccctgct tcccttcatc
    16081 gaaagcgcgt tcgtcaccaa agccaaatca cacgtcggcg catcaggatt atggcagttt
    16141 atgcccgcta ccggcaggca ttacggcctg gaaaaaacac cggtttacga cggcaggcac
    16201 gacgtttacg ccgccaccga tgccgcactc aactatctgc aatacctcta tggactgttc
    16261 ggcgactggc cgcttgcctt tgccgcctac aactggggtg aaggaaacgt cggacgcgcc
    16321 atcaaccgcg cccgcgccca agggctcgaa ccgacctacg aaaacctgcg tatgcccaac
    16381 gaaacgcgca actatgtccc caagctgctc gccgtgcgca acattattgc cactccccaa
    16441 tctttcggca tgaatatcag cgacatagac aacaaaccct attttcaggc agtcgaaccg
    16501 gatcgtccgc tcgacaacga agccatcgcc cggcttgccg gcatcacgca aagcgagctg
    16561 ctcgccctaa accccgcatt caacgtcccc gcgtttatcc ccaaaagcaa acgcaaactg
    16621 ctgcttcctg tcgcgtccgt acaaaccttc caaagcaact acctcaacgc cgcacccgac
    16681 agcctgtttt catgggaagt ctatacgcct gccgccaaaa ccagcctgtc cgacatctcg
    16741 acggcaaccg gcatgagcat tgccgacatc aaacgcctca acaacctgaa cggcaacctt
    16801 gtcaacgcag gacgcagcat ccttgtcgcc aagaacggca aaacccttca gacggcatcg
    16861 gaatccgtcg tttccatcga catcgacaat acgcccgaca cctaccgttc caatatgccg
    16921 gcaggcacgg tgaacgtcgg cattgcccga atccgacccg ccgccgcaca gacagcggac
    16981 attaccgtcg cacctttgcc gcagaaaacc gtccgtacgg aacccgatcc ccttgtccgt
    17041 attgccgaac ctgcccttgc gacagccgca gcgcaacctc aaaccgaaaa acagaccgcc
    17101 atgccgtctg aaacccaaac cgcaacactc gcgcagatca tcccccaaaa cgacatgcag
    17161 gcggcagacg aactcatgca gcttgttgcc cgaaacaacc tgcgccgaca ggctgaagaa
    17221 accatctccg ccgtcatcgg cacgcctgac acagttgccg aacacaacat ttcctcatct
    17281 ccgcaacata ccgttgccgc cgacggcaaa cgccgggcac gtttggaaac gcgcgtagcc
    17341 aaagctgccg acggcgaagc cgaaatctcc ccgctccatg ccagcatcca ccgcgttgta
    17401 gaaggcgaca ccctgttcaa cattgccaaa cgctacaacg tcagcgtagc cgacctgatt
    17461 gtcgccaaca acatcaaagg caacaccatc caaaaaggac aggtactccg cctggcgcag
    17521 gcagcccctg cccaaacccg tattgaaaaa gtatcctaca ccgcgcgcaa aggcgacacc
    17581 ttcaaaagta tcgccgcgcg cttcaatatc catatcgacg acatccgccg gctcaatccc
    17641 aacctgaaca ccatcaatcc gggacagagg gtcaaactga ttggaagctg attcggatac
    17701 ggcacatgac aggactttct cagtcctgtc tttttcatcc cacatttccc ataccatcat
    17761 gaaactcatc aaatacctgc aatatcaagg cataggaagc cgcaagcagt gccaatggct
    17821 gattgccggc ggttatgttt tcatcaacgg aacctgcatg gacgacaccg atgcagacat
    17881 cgattcctca tctgtcgaaa cgttggatat tgacggggaa gcagtaaccg tcgttcccga
    17941 accctatttc tacatcatgc tcaacaagcc tgaagattac gaaacttcgc acaaacccaa
    18001 gcactaccgc agcgtattca gcctgttccc cgacaatatg cggaacatcg atatgcaggc
    18061 ggtcggcagg ctggatgcgg atacgaccgg cgtattgctg attaccaacg acggcaaact
    18121 gaaccacaac ctgacttcgc cgagcagaaa aattcccaag ctatacgaag taacgctcaa
    18181 acaccccaca ggagaaacgc tctgcgaaac cttgaaaaac ggcgtgctgc tccacgacga
    18241 aaacgaaacc gtttgtgccg ccgatgccgt tttggaaaac ccgaccaccc tgctgctgac
    18301 cattaccgaa ggaaaatacc accaagtcaa acgcatgatc gccgccgccg gcaaccgcgt
    18361 gcaacacctt catcgtcggc gattcgcaca tttggaaaca gaaaacctga aacccggcga
    18421 atggaaattt atcgattgtc caaaattctg aaacaaaatt ccataatttc cctatattca
    18481 actatatgct tattaaataa gtagttttac aaaaattaac tcaaaaaaaa acagttagct
    18541 tgcgatataa ttcgcttgtc tgagtaacgc ctgttcaagc aggcttatga gtaagacgtt
    18601 ttccccgtaa tgtgttttgc catctatact tctccccctt gtatagatgg tttttttatc
    18661 ttcgtttact acacatacta catatgttac tgacgcagca ttcccgatca tatgacatat
    18721 gaaattttat ttcaccgtcc cagtgtagaa aaataaacga ttcatctatc tataaaatct
    18781 gattcaatcc ttgttgattt atgcaaatca gaaatatcca ctataaaata taactctatt
    18841 agtgaaaata actacacact taaaaaacaa tcagtcagtt cctgttaaaa aacgcgtgta
    18901 gaatttccgc tttatctcaa tcggacacgg tttcaatatg tcttcccctt caaataccaa
    18961 tcgtcaaacc tgatccagcc gattaaccta agtggagtat ctgaccacta ccattcccac
    19021 gcattttgag attgagcgaa cacgccttgc cgatgttatt ttgacaaaat tatccgatga
    19081 caaagcggtt aaattggcaa agcaaatgct tgatgagcat gaatacattg agagcctact
    19141 tgtcaatacc gacccaagcg tcgacgatgt caaggagctt gcaaatgctc tgtatgacca
    19201 tatccgcttt gaagagcgag agctttttcc cattgctgag acggtgctaa gcgatgatga
    19261 gctttttgcc atttatgagg cgagtgatga gaatgtaaaa tgaacgagtt aaaagctggg
    19321 caatggaatt aaaaagccaa acaccacgtt tggctttcgt ttaattttaa aattgctaaa
    19381 agttatttaa acccatcttt taatcccaca atctgattaa acacaggttt atcggtgcta
    19441 tgctccacgc tgtccgccac aaagtagctt taatattata atatatctga atttgaattt
    19501 tggaatgagt tatcaaagat tattgatgaa tttcaccatc aacatccaga gctaaatgag
    19561 aggattgctt tatttgattt aaaaagacca aaatttgaaa aggtgtgcct aaatcgtgtt
    19621 cgctttttta caagaggtta tcaagataac gccaaccgtc cagaacccgt ggtttgcgaa
    19681 ccaatttgca atccaatatc accacagttt ctaaggtgtg ttgaacattg ataacattat
    19741 ttgtaaaaat gatgaaaatt ttaacgcttt tattagtttt tgcatgaaaa acgtgcgatt
    19801 tttctcattt ttcattgcaa ataccaaata ttcaacacac cctaatgaga gaatagaaat
    19861 gctagaaatc tataccgatt cttttaatca agatcaatgc agtaaaatca atcgattgcc
    19921 aactttatct caggggttgc caaacaacta tatttacaga gaaaatgggg ttgaatttgg
    19981 gttggtgcaa atacgctacc ctgaacatat tgaattgttg catcgttgga tgaatatgcc
    20041 ccatgttatc cctcaatggc aactcaataa atcattgtct gagctgtctg tttattttga
    20101 aaaaatgttg gctgatgatc accagcgttt gtatttggtt agtattaatg gcgaatgggt
    20161 tggttacgcc gaagtttatg aaggggcaag ggatagacta tcagggtatt atacagctga
    20221 caaaaatgat ttgggttggc atttgttact agcagaggca caggctgttg gcaaagggta
    20281 cttgcgtgcc atcatgcgtc tactaagctt ttttattttt gaacattcac ctgctaaaaa
    20341 aattgtgggt gaacctgatg caagtgtaaa accctatgag gtagtcgctc aagaattaaa
    20401 ctatatgccc caatatcaaa ttgtaatgcc tgaaaaaact gcaatgttat atttttgtga
    20461 caaagaaggg ttttattgta agtttgccca ttatttaaat gccagcatta aagagtgatg
    20521 ttatgcctat ttttctaaat gctattcaga acccaaatag ctccttacct gtatttttac
    20581 tcgatttttc aggcgagatt agtcaagatg catttgatga ttggttgatt gctatgagtg
    20641 atttgttagc cagtgagcag agttttgcct tgatttacca tagtcggaca gggctgacac
    20701 tccctaataa ctaccgccag attgaggcgg tttggtacaa gacgcacaaa gaatcgttct
    20761 ttaaatattg caagggatta gtcagaattg ttgatgatga gactcaaaga caagccttag
    20821 acagtcctgc ttttcataaa gcatggcgag tgccttatgc ggtggtgttg tcactgactg
    20881 aagccaaagc atggataaac actaaaatag gggcggtctg atgattatct cacaacaaaa
    20941 aaatcgccat cttttgacga tggtggcact gttatatgtt gcccatgcct tgcctttgta
    21001 tttttttaat gtggcattgc ctgccatttt aagacatcaa ggcgttgata ttagggtgat
    21061 tggcatgctt tcacttttat atttgccgtg ggcgtttaaa tttctgtggg caagttatgt
    21121 ggacaattat tattgtgcca aaatcggcaa acgcaaaact tggttatttt ttactcaaat
    21181 tatcgtggta gtcgggctgt ttgggcttgg ctttttacag ttttctgagt ctgagattgt
    21241 attatttctg agcataagtt ttttggtgtc tttggcaagt gccacccaag atatcgctat
    21301 tgatggctat acagtggaac aatttgataa gtcatccttt gggctggcaa gtgccatgca
    21361 aagttttgga gtggcgtttg gtagtatggt aggcggtgct ggcacactgt ggctatatca
    21421 gagatttgat tggcaaatgg caacaatcag tttggcaaca actgttgtgc ttatttcgtg
    21481 ttcactatgg ttcttaaaag atcaagacaa tcccaaacat gctaccaata tttccaaagc
    21541 aagtcttatt aggcttatca aacgcccgca aactaaatgg ttactagctt tgattgtggt
    21601 gtttcgcttt gtggaagctc cgatgatggc aatgctaaat ccaatgcttg tggattttgg
    21661 tttttcactg tctcagattg ggcttttgtt ttcggtattt ggagcgattg ttgggattgg
    21721 ttcagcactt ttggcagggg tattaatcaa atatatcgac attgtacgtt gtcttatatt
    21781 attcggatgg ctaagaacgg cagtttatgc tttgttgtgt ttaggattgc tatatccttt
    21841 attgggtgat tttttacctg cggtaggttt attaaaaaca gggtttatga gcttgatggc
    21901 aattagtgtt ttgctaattt tatctgttcg ctatttaaca atgactgcct tatatgctct
    21961 gtttatgaat gctgccaatc ccgaccaagc tggcacggac tttactttgt ttgtgtgcgt
    22021 ggagttgctt gtgtatttta tcggcggggc gatgagtgga tttttagtac atcagtttgg
    22081 ctatgacaag ctatttttgt ggcttgcgat tggttctggg gtgtcaatgc ttattttgcc
    22141 gacattgata aaaaaatttt ccgtaacaga ctgttaaacc gtaacagact gttaaaattt
    22201 tacttttcca taaggagtaa tttatgcgtc attcccacta ttttcaatgg ttatctttgc
    22261 ctttactaag tgtggcagta actcagcagt tgtacgctca acccaatgaa tcattaccaa
    22321 cggttgaatt agagcctgtg gttattacca ttgataagag cggtatggca cttgccaatc
    22381 gtatcacgca aatgccccat accaccaaag ttatttatga agagcaaatt caagagcaag
    22441 caacaggctc tcgacagctt gccgatgtga tggcacagct cattccaagt ttgggggtaa
    22501 gtagtggcac taccagtaac tttgggcaaa ccatgcacgg tcgtcaagta caatttttgt
    22561 taaatggtgt gcctttgaca ggttcgcgag acatctctag acagcttaat agtatcaacc
    22621 ccagtcaagt ggctagaatt gaagttttat caggagcaac cagtatttat gggtctgggg
    22681 caacaggcgg tttgattaat atcgttacta agtctgattt ggaagaggag caatttgaaa
    22741 cccgcatcgg tgtacatggt agtaaattat ccagtgaagg tatcggttat caggtaggtc
    22801 agagtgtggc aggtgtcagc gaaaatggca atgtccttgc acgacttgat gtcgactacc
    22861 gcaccacagg aggggcattt gatgctagcg gtaaacgcat cgctcctgag cctgcccaaa
    22921 ccgacaaaca agacagcaaa agcctaagtg ttaatgcaaa tgttgattgg caaatcgatg
    22981 ataaacaaaa catcaattta gcattgacac attattcgga taagcaagat accaaatatg
    23041 ctcccgatta tggcaatggt ctttctgtgc tatttagggc agcaccatct ttaaatgcag
    23101 ttgagggact gtctttatca gaacagccta aaaccaccaa aagcaccttt aatatcaact
    23161 atcatcatga tgatttgtgg ggtaacacca tcaataccaa tgcttattat cgcagagaga
    23221 aaggcagatt ttatcccttt gttgctccat tttcgaccgc caaagccctg cctattttac
    23281 aaagcatgaa tttgccacca gccactttgg atgcttatac caaggctcta caagctcgcg
    23341 cctatggggt gttacaatcc gaatccaagg cagatgtatt gggagcaaga ctggctttgc
    23401 aaagaaaatt tgaccttgct caaaaacctg tactacttag ttatggtatc gattatgaac
    23461 aagaaaaaaa ccgccaaggg gcgacaggct atgatttgac tacctttatg caaagcaacg
    23521 gcttggcatt taaagacact ggcaaccgtt acacttatgg acctgacacc accttaaaaa
    23581 cctacggcat atttgccaat gctaatgttg ctttgacaga tgatttaaaa atatcggcag
    23641 gtgtacggca tcaaattata gacagtaaaa cagatggttt tgtgccaccc agtgagtcgc
    23701 tattagccga tttattaaag ccgtatcaag caggaactgt caattctggc aaagtgaagc
    23761 atcacaaaac cttatttaat cttggagcaa attactcatt aactccaaat cacagtattt
    23821 ttgccaattt tgggcaagga tatagtttgc ctgatttaca aagggtgcta agagatgttg
    23881 ggacgggttt tgcggttaat tctgataatg ttgagccaat ttcagtcaat agttatgatg
    23941 tgggttgggt gggaacattt ggcgatagtc atgctaaact gacagcattt tataatacat
    24001 cagacaaagt cactcagttt ttaaaagatt atagcgtggt tgttgccgat actgacgaac
    24061 gtatctatgg agcagagttt gaattaaacc ataaaattaa cgatagctgg accatgggcg
    24121 gtagtattgc ctatacacgg gggcaataca aagatgcaag cggtcaatat cgagaacttg
    24181 gggcgtttcg tatcagccct accaaagcca ccgcttttgc tcaatataca gcctgattgc
    24241 caaaaccaat caaaatgtcc gcaaaacccc ggaggctaga atttcaggct atgtcgtggc
    24301 ggatttattg ggtgagatca aactacctaa aggtcagtta aactttggga tttataactt
    24361 gacaaataaa aaatataaaa gtgtatttag tcaagctgcc aaagtgactt atggtgaatt
    24421 atccagcttg tctgcacagg ggagaagtta tgggataagt tataccttaa attattgatc
    24481 agcattatgt gccacaatac cacaaacatc gccctagtgt ttgtggtttt tttattttat
    24541 aataaaattt aatttaccaa caggaacccc catgaaacga caccccacct tacagcccct
    24601 atctcgccag caccatttgg gcttggtcat cgccaacaaa gccaaatccg tcaccgatga
    24661 tgacaaactt acccaccatc aagcctttat cctgaccatt gccggcgcga ctgtcggttt
    24721 cggcgcgacg tggcgtttcc cgtatttgtc ggtgaaaacg gtggtggcgc gtatgtgttt
    24781 ttattctgta tcgcgatgct ggttatcggc atcccgatga ttttggtgga aaatgtcatc
    24841 ggacggcgca aaggcgtgaa cgcgctggat gcgttcggcg gcccgatgaa cggcaaaccc
    24901 attgccaaaa tttggaaact ggtcggctgg atgggctgct cggcgcgttc ggcatcatgg
    24961 cttattacat ggtgctcggc ggctgggtca tcagctatat cgttaatatt attggcggaa
    25021 atctgaatat ttccagcccc gtcgacggtg tggttacaaa aggctttttt accgaacaca
    25081 ttgaaaacag cccttgggaa attgcgttct acactttctt gtttgtcgtt gtgaaccaat
    25141 ggattttagt caaaggcgtt atcggcggta ttgaaaaagc ggcaaaatac ctgatgccgc
    25201 tgctgttttt gttcctgatt gccatggtcg tacgcaacgt taccctgcct ggcgcaatgg
    25261 aagggattac tttctatctg aagcctgatt tcagcaagat taccaccgaa ctgttcgtct
    25321 tcgttttggg acaagtattt ttcgccttga gcttgggttt cggcgtgatg attaccttat
    25381 ccagctatct ggataaaaac gaaaatctgg ttcagacggc agttatcacg gcaattacca
    25441 ataccatcat cgccgtactt gcgggcttta tgattttccc gtcgctcttc agcttcggcg
    25501 tcgcgcccaa ttccggcccg actttggtgt tccaaagttt accgattgtg ttctcacata
    25561 tgtgggcagg atctgtgttc gccgtcattt tcttctctct actcctgatt gccgcgttga
    25621 caacttcgct gacgatttat gaagtgttga ttacgaccat tcaggaaaaa accaaaatcc
    25681 gccgcaccgc cgcgattacg attgtattgg ctgccatctt cattttcggc aacatcccgt
    25741 ccattctgag ctatggtccg tggaaagacg tttccgtgtt cggcaaaaat attttcgatg
    25801 ccttcgacta catcagcggc aacatcttgt ttatgctgac cgcgcttggc tcggcattgt
    25861 ttgtcggctt cgtgatgaaa gatgaagcga aggacgaatt gctctacaaa ggtaaccata
    25921 ccaccgtcaa tatctggttt gcctatgtga aatacctcgt gccgttggtg attctgctga
    25981 tttttatcag caacctgttc taatccgcag caatcaatgc cgtctgaagg tcatacctct
    26041 ttcagacggc attgcattga tgcccgccac aatacccgca acgccggaat ccgaaccggc
    26101 ttgccggctt ctgtcggatg tttccgggca ggcggcgttc cgtctgctta gacaatcgcc
    26161 ctttaaaaca ggtagaatcc gccccaatgg gaaacacatc cttcagacgg caaaacccat
    26221 accccaaacc atcaggaatc cccattatga acagacaaaa agtgatcgcc atcgacggcc
    26281 cgggcgcatc gggcaaaggc acggtcgccg cccgcgtcgc cgccgcattg ggatacgatt
    26341 atctcgatac cggcgcgctc taccgcctga ccgccctata tgcacaaaaa caaggcgtgg
    26401 aatggcacga tgaagaaaat gtttccgcac ttgccgaaaa actgcccgcc gtattttcag
    26461 gcagccgcat cctgctcgac ggcgaagacg tttcagacgg catccggaca gaagccatcg
    26521 gcatgggcgc atccgcagtc gcacagttgc ctaaagtccg cgcctccctg ctgcaacgcc
    26581 aacgcgattt tctgaccgaa aaaggactgg tcgccgacgg acgggatacc ggatcggtcg
    26641 tcttccccca ggccgaactc aaaatttttc tgacagcaga atccaaaatc agggccgaac
    26701 gccgcgccaa acaaatcggc atcccctgcg aaggtttggc attcgagcgc atcctgtccg
    26761 acatcgagac cagagacgag gcagaccgaa accgcaaggt tgcccccctg aaacaacaac
    26821 ccgatgccct gcttttggat acgagccgcc tgactataga agaaactgta aaaaaagtgc
    26881 ttgattggta tcgtaaagtt taaattttca ggtataatcg cccgcattgc gtttcagaca
    26941 gcatgaattt ccccatatgc cgtctgaaac cttatttacc cgtctgccct gccaaggacg
    27001 gcagacaccc accaacccac cccgcacccc ttggcggtgt accgaaaaga gttatatatg
    27061 tctatggaaa attttgctca gctgttggaa gaaagcttta ccctgcaaga aatgaacccg
    27121 ggtgaggtga ttaccgctga agtagtggca atcgaccaaa acttcgttac cgtaaacgca
    27181 ggtctgaaat cagaatccct gattgatgta gctgaattca aaaacgctca aggcgaaatt
    27241 gaagttaaag tcggcgactt cgttaccgtt accatcgaat ccgtcgaaaa cggcttcggc
    27301 gaaaccaaac tgtcccgcga aaaagccaaa cgcgctgccg attggattgc cctggaagaa
    27361 gccatggaaa acggcaacat cctgtccggc atcatcaacg gcaaagtcaa aggcggcctg
    27421 accgttatga ttagcagcat ccgcgcattc ctgccgggtt ctttggtcga cgtacgtcct
    27481 gtaaaagaca cttctcactt cgaaggtaaa gaaattgaat tcaaagtgat caaactggac
    27541 aaaaaacgca acaacgttgt tgtgtcccgc cgcgccgttc tggaagctac cttgggtgaa
    27601 gaacgcaaag ccctgctgga aaacctgcaa gaaggctccg tcatcaaagg catcgttaaa
    27661 aacattaccg attacggtgc attcgttgac ttgggcggca tcgatggtct gctgcacatc
    27721 accgacttgg catggcgccg tgtgaaacac ccgagcgaag ttctggaagt cggtcaagaa
    27781 gtagaagcta aagtcctgaa attcgaccaa gacaaacaac gcgtttctct gggtatgaaa
    27841 caactgggcg aagatccttg gagcggcctg acccgtcgtt acccgcaagg tacccgcctg
    27901 ttcggtaaag tatccaacct gaccgactac ggtgcgttcg ttgaaatcga acaaggcatc
    27961 gaaggcttgg tgcacgtttc cgaaatggat tggaccaaca aaaatgtaca cccgagcaaa
    28021 gttgtacaat tgggcgacga agtcgaagta atgatcctcg aaatcgatga aagccgccgg
    28081 cgtatctctt tgggtatgaa acaatgccaa gccaatcctt gggaagaatt tgccgccaac
    28141 cacaacaaag gcgacaaaat ctccggcgcg gttaaatcca ttaccgattt cggcgtattc
    28201 gtcggtctgc ctggcggcat cgacggtttg gttcacctgt ccgacctgtc ctggaccgaa
    28261 tccggcgaag aagccgtacg caaatacaaa aaaggcgaag aagtcgaagc cgtcgtattg
    28321 gcaatcgacg tggaaaaaga acgcatctcc ttgggtatca aacaactgga aggcgatccg
    28381 ttcggcaact tcatcagcgt gaacgacaaa ggttctttgg ttaaaggttc cgtgaaatct
    28441 gttgacgcca aaggtgctgt tatcgccctg tctgacgaag tagaaggcta cctgcctgct
    28501 tccgaatttg cagccgaccg cgttgaagat ttgaccacca aactgaaaga aggcgacgaa
    28561 gttgaagccg tcatcgttac cgttgaccgc aaaaaccgca gcatcaaact ttccgttaaa
    28621 gccaaagatg ccaaagaaag ccgcgaagca ctgaactccg tcaatgccgc cgccaatgcg
    28681 aatgccggca ccaccagctt gggcgacctg ctgaaagcca aactctccgg cgaacaagaa
    28741 taaggttgca gacatgacaa agtctgagtt aatggttcgt ttggcagaag tgtttgccgc
    28801 caaaaacggc acgcatcttt tggcaaaaga cgtagagtac agcgtaaaag tcttggttga
    28861 caccatgact agatcgcttg cccgaggtca acgcatcgaa atccgcggtt tcggcagctt
    28921 cgatttgaac catcgtcctg cccgcatcgg tcgcaatccc aaaaccggcg agcgtgtgga
    28981 agtacctgaa aaacatgtac cccacttcaa gcccggtaaa gaattgcgcg agcgggtcga
    29041 cttggcttta aaagaaaatg ccaattaaac cttagcatca aaacgccgct gttacgcggc
    29101 gttttttctg tggtttaact tcatccgttg cttcaatacc ttgagccaag caagcaacgg
    29161 attagagcgt ggattttttt atagtggatt aacaaaaacc agtacggcgt tgcctcgcct
    29221 tagctcaaag agaacaattc tctaaggtgc tgaagcacca agtgaatcgg ttccgtacta
    29281 tttacactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatatcattg
    29341 cttacaatcc gctttttaaa caacaaattt ttgatttcta ttacgaacag gacaaaaatc
    29401 ctgcttattg cactaaaact aagccgtttc aggaatttgc ggcaaattta cagcttttac
    29461 cgagcctaat gctttcgctt tttggtaaaa cgccaatttg tattcaagca aatctaaata
    29521 gcgttttaat tcggcaattt gacacttcac attttctatt tgattttcaa acaaggaaag
    29581 gcgttcttca atggtatcgt cgccaatgac ggtacattcc gcaaagcgtt tgatgtcttt
    29641 taagctcatt cccgtatttt tcaagcattg caataagccc aaccattgca aatcgttatc
    29701 ggtaaaacag cggttaccgt attcatcacg tccgatatta ggcaacaagc cttctttgtc
    29761 gtaaaaacgt agggtgtggg cggagatgcc tattttttcg gcggctttgg cagtggtata
    29821 agtcattttc cctccttcta aacaaaaaca gtaaaaaaca cttgctttag agttaactct
    29881 aaagtgtaaa ctgttgctat gttgctcagg taaggcaact ttgtcaatga attaagagga
    29941 aagacaatgg aaatgaaaca aaccgattca accatcaaat ctcgtgcggc ggtggcattc
    30001 gcccctaacc aacccttaca aattgtggaa atcgacgtag aaatgccgcg taaaggcgag
    30061 gtgttaatcc gcaataccca cactggcgtg tgccatactg atgcgtttac gttatcagga
    30121 agcgatcctg aaggcgtatt ccctgtggtg cttggacacg aaggtgcggg tgtggtcgtt
    30181 gctgtgggcg aaggtgtgtc aagcgtaaaa ccgggtgatc acgtgattcc gctttacacc
    30241 gccgaatgtg gcgaatgtga gttttgttgt tcaggtaaaa ccaacttgtg cgtctcagtg
    30301 cgtgatacac aaggtaaagg cttaatgccg gacggcacga cgcgtttttc ttatcaaggt
    30361 cagccaatct atcactatat gggctgttcg actttcagtg aatactccgt tgttgccgaa
    30421 gtttcactgg cgaaaatcaa ccctgaagcc aaccatgaac aagtatgttt gctcggctgc
    30481 ggcgttacca caggtattgg cgcggtgcat aatacggcaa aagtgcaaga aggcgactct
    30541 gttgccgtgt ttggcttagg cgcgattggt ttggctgtgg tgcaaggtgc gcgccaagcc
    30601 aaagcaggcc gcatcatcgc cattgatacc aatcccgcaa aatttgagtt ggcaaaacag
    30661 tttggtgcaa cggattgttt gaacccgaac gattacgata aaccgattaa agatgtgttg
    30721 ttagacatca ataaatgggg cattgatcac acctttgaat gtatcggcaa cgtaaacgta
    30781 atgcgtcagg cattagaaag tgcgcaccgt ggttggggac aatccattat catcggcgta
    30841 gcaggtgcag gacaagaaat ttcaacgcgt ccgttccagt tggtaacagg tcgtgtttgg
    30901 aaaggttcag catttggcgg tgtgaaaggt cgctctgaac tgccgaaaat ggtggaagat
    30961 tcaatgaaag gcgacattga gttagaaccg tttgtaaccc acacaatgac actcgatcaa
    31021 atcaataaag cctttgactt aatgcacgaa ggtaaatcga tccgcgccgt tattcactac
    31081 taaggtatgc gatgaaactg attgaacaac atcaaatttt tggcggttcg caacaagttt
    31141 gggcgcatca tgcccaaacg ctgcaatgcg aaatgaaatt tgccgtctat ttgccaaata
    31201 atccagaaaa tcgaccgctt ggtgtgattt attggctttc cggcttgacg tgtacggaac
    31261 aaaatttcat taccaaatca ggctttcagc gttatgcagc agaacatcaa gtgattgtgg
    31321 ttgcccctga taccagccct cgcggagagc aagtgccgaa cgatgcggct tacgatttag
    31381 gacaaggtgc gggcttttat cttaatgcaa ctgagcagcc ttgggcgacg aattatcaaa
    31441 tgtatgatta tatcttgaac gaattgcctg atttggttga agcaaatttc tctactaacg
    31501 gcaaacgttc cattatgggg cattcaatgg gcggacacgg tgcattggta ttggcactgc
    31561 gaaatcggaa acgttatcaa agcgtttctg ctttttcgcc tattttatcg ccaagcctcg
    31621 tgccttgggg agaaaaggcc tttactgctt atttagggga agatcgtgaa aaatggcagc
    31681 aatatgatgc cagctcgctc attcaacaag gctataaagt gcaaggtata cgcattgatc
    31741 agggcttgga agatgagttt ttgccgacac aattgcgtac cgaagatttt atcgaaacct
    31801 gtcgtgcggc aaatcagtcg atcaatgtgc gctttcacaa aggctacgat cacagctatt
    31861 acttcatcgc cggttttatt ggcgagcata ttgcttatca cgccgcgttt ttgaagtaaa
    31921 ccaaagagcg ttcagtgttc aaagcagttt tgggatagcc ggcacgaggg cggtaagaag
    31981 tgccggcaaa ataccaacat aaacgtatgc cgtctgaacc ggaaggagcc gaccctacgg
    32041 attaccaaac cctgcccttg atttgattag tatgattttt aagcttaaac cctgattggt
    32101 caaacattaa aatcgcccgt atttcctact tcactttcgg gcttcgtatt attcattgtc
    32161 gaatttacat aagcagcctg ttgtgttttc tccccctcca agctgacggt ggcgtaacag
    32221 cttcgcgatt caccatctgt ttcatttgtc ctccttcaat attaaaacgc agcctgaaac
    32281 aaaaggcatt tctttcaata aattggcgat atcaacatca tattggaacg ccgcctttgc
    32341 tgatgcgcgt cattattctt ttccacggaa aacgccaagt ttgaaggaaa tcatttataa
    32401 taccgacggt aagcattttc tttctccgcc gcaagaagta taacaaggtt aaatatgagt
    32461 aatagagacc aactttttaa agccccgccg tttgaaaatc acagcccgct gacttggtat
    32521 caggctgcct cacaactgcc caacttcatc cgcgacgacg cgcaggcagc cgccatcgaa
    32581 cacctcgatc ggctttggac cgaattgatg atgttcaaac gcaaaagaaa ccgtttttta
    32641 ggcaggagtt tgcgttcccc gcaagtcccc aaagggcttt atttctatgg cggggtcgga
    32701 cgcggcaaaa gctttctgat ggacgctttt ttcggctgcc tcccttaccg ccgcaaacgc
    32761 cgcgtccact ttcatgcctt tatggcagaa atccaccaga ggctgaaaac cctgaaaagc
    32821 gaaagcaacc cgttgaaatc cgttgccgcc gagattgcca aagaaacccg cgtattgtgt
    32881 tttgacgaat ttcatgtcag cgatattgcg gatgcaatga ttttaggccg tctgctggaa
    32941 aacctgctta acgagggcgt tgttttggtg gcgacttcaa actacgcgcc ttccgaactc
    33001 tacccgcaag gtcaaaaccg gagcagtttt cttcccacaa tcgcgctcat cgagtccagc
    33061 ctgaccgtct taaacgttga cggcggtgaa gactaccgac tgcgtaccct ccgccccgcc
    33121 gagattttct ttacgcctgc caatgaagaa aatgaggcaa aactggcaaa actgttcaaa
    33181 gaaatgacag gcattaccga tttgaacccc ggcatcagca ccatccatgg tcgggagatt
    33241 ccccacaaag ccgagtccgg ccgtgccata tggtttgatt tccgcgcact gtgcttcggc
    33301 ccccgctcac agtccgacta tctgtatttg gccgaacatt atgaaatggt ttttatttca
    33361 ggtttggaac aactctcacc gcaagaaaag gcggaggcgc ggcggctgac ttggctgatt
    33421 gacgtactct acgatttccg ggtcaaactg tgtgccaccg gcgcggtaga tgtcaaccat
    33481 atctatacgg aaggcgattt tgccgaagaa tttacccgca ccgccagccg gatggtcgaa
    33541 atgcagtccg aagtttattt ggaacagccg cacctgaccc tatctcccaa ggcttcaggc
    33601 ggataagtta tttttttgat agaataccga tttgattctt cttaagtaaa aataaggata
    33661 tagcatggcg attgaacgca ccatctccat catcaaaccc gatgccgtcg gcaaaaatgt
    33721 tatcggcaaa atatacagcc gctttgagga gaacggtctg aaaatcgttg ccgccaaaat
    33781 gaagcagctt actctcaaag aggcgcaaga attttatgcg gttcataaag accgcccctt
    33841 ctacgccgga ttggttgaat ttatgaccgg cggtccggtt atgattcagg tattagaggg
    33901 tgaaaacgcc gtcctgaaaa accgcgaact gatgggtgca actaatcctt ccgaagccgc
    33961 cgaaggcacg atacgcgcgg actttgccac ttcggtcagc attaatgccg tacacggttc
    34021 cgacagcgtg gaaaatgccg ctttggaaat tgcctacttt ttcagccaaa ccgaaatctg
    34081 cccccgttga tacaatacac cgcacaactc ctcttcagac ggcataaata tatccatgcc
    34141 gtctgaaaac tctgtcgcaa aaggcttcaa atcaaacttg cctgccctgc aattttttat
    34201 ttgaagcctt aatttaagaa aaacacaaac acatgaaaac caatctgctc aactacgacc
    34261 ttcaagggct gacccgacat tttgccgata tgggcgaaaa acccttccgt gccaaacagg
    34321 ttatgcgttg gatgcaccaa tccggcgcgc aaaattttaa cgaaatgacc gatttggcaa
    34381 aatcgttgcg ccataaactg aacgaacagg caggcatcga aattcccaag ctgatgatgt
    34441 ctcaagaatc ttcagacggc actcgaaaat ggcttttgga tgtcggtacg ggcaacggcg
    34501 tggaaaccgt cttcatcccc gaatcggatc gcggcacgct ctgcatttcc tcacaagtcg
    34561 gctgcgcttt ggaatgtaca ttttgttcga ccggccggca gggcttcaac cgcaacctga
    34621 ctgctgccga aatcatcggg caattgtggt gggcaaacaa agcgatgggc gttacaccga
    34681 aaaacgagcg cgttatttcc aacgtcgtca tgatgggcat gggcgagccg atggcgaact
    34741 tcgacaatgt cgttaccgcc ttaagcatca tgctggacga ccacggctac ggtttgagcc
    34801 gccgccgcgt aaccgtttcc acttcgggta tggttcccca aatggacagg ttgcgcgatg
    34861 tcatgccggt ggctttggcg gtttccctcc acgcttccaa tgacgaagtc cgcaaccaaa
    34921 tcgtaccgtt gaacaaaaaa tatcccttga aagaattgat ggccgcatgc caacgctatc
    34981 tggtcaaagc acccagggat ttcatcactt tcgaatacgt catgttggac ggaataaacg
    35041 ataaggcgca acatgcgcgc gaactgatcg aactggtcac agatgttccc tgcaagttca
    35101 atctgattcc gttcaatccc ttcccaaact ccagatacga acgctccagc aatgagaaca
    35161 tccgtgtgtt ccgcgatatt ttgcagcagg caggatttgt cgttaccgta cgaaaaacgc
    35221 gcggcgacga catcgatgcc gcctgcggac agttggcggg gcaggttcag gataaaacgc
    35281 gccgccaaca aaaatggcag cagattttaa tcggacaaca ggggtaatta tgccttttaa
    35341 gccatccaaa cgaatctctt tattacttgt ccttgccttg ggcgcgtgca gcacttccta
    35401 ccgcccctcg cgggcagaaa aagccaatca ggtttccaat atcaaaaccc agttggcaat
    35461 ggaatatatg cgcggtcagg actaccgtca ggcgacggca agtattgaag acgccctgaa
    35521 atcggaccct aaaaacgagc ttgcctggct ggtccgtgcc gaaatctacc aatacctgaa
    35581 agttaacgac aaggcgcagg aaagtttccg gcaagccctc tccatcaaac ccgacagtgc
    35641 cgaaatcaac aacaactacg gttggttcct gtgcggcagg ctcaaccgcc ctgccgaatc
    35701 tatggcatat ttcgacaaag ccctggccga ccccacctac ccgacccctt atattgccaa
    35761 cctgaataaa ggcatatgca gcgcaaaaca ggggcaattc ggattggcgg aagcctattt
    35821 gaaacgttcc ctcgccgccc agccgcagtt cccacccgca tttaaagaac tggcgcgcac
    35881 caaaatgctg gccgggcagt tgggcgatgc cgattactac tttaaaaaat accaaagcag
    35941 ggtagaagtc cttcaggccg atgatttgct gctaggctgg aaaattgcca aagccctcgg
    36001 caacgcacag gcggcatacg aatatgaagc acaattgcag gcgaatttcc cctactcgga
    36061 agaattgcaa accgtcctca tcggtcaata aacagattca aaccatatga acacactcca
    36121 acgccgcaag acgcatcaag tccgcatcga tcatattacc gtcggttcag aagcacccgt
    36181 cgttatccaa tctatgacca acaccgacac tgccgatgca aaagccaccg cattgcagat
    36241 taaggaattg agcgacgccg gatccgaaat ggtgcgtatt accgtcaaca gccccgaagc
    36301 cgcgtccaaa gttgccgaaa tccgccgccg cttggacgat atgggctatg ccacaccgct
    36361 tatcggcgat ttccacttca acggcgaacg cctgttggcg gaatttcccg aatgcggcaa
    36421 agcattgtcc aaataccgca tcaatcccgg caatgtcggc aaaggcgtaa aaggcgatga
    36481 aaaatttgcc tttatgattc ggactgctgc tgaaaacgat aaagccgtcc gcatcggcgt
    36541 aaactggggt tctttggatc aaagcctcgc caaacgtatg atggatgcca acctcgcttc
    36601 ttccgcgccg aaaccgcccg aagaagtgac gaaggaagca ctgattgtct ccgctttgga
    36661 atctgccgaa aaagccgttc tattgggact gcccgaagac aaaatcatcc tgtcgtgcaa
    36721 agtcagcgcg gttcaggatt tgattcaggt ttaccgcgaa ctgggcagcc gttgcgccta
    36781 tccgctgcat ttgggtttga ccgaagccgg tatgggcagc aaaggcattg tcgcatcaac
    36841 ggcggcatta tccgtcttgc ttcaagaagg aatcggcgac accatccgca tttcactgac
    36901 tccggaacct ggcagcccgc gtactcagga ggtcgtcgtc gggcaagaga ttttacagac
    36961 tatgggattg cgttcgttta cgccgatggt taccgcctgc cccggctgcg ggcgtaccac
    37021 cagtaccgta tttcaagagc tggcacaaga tgttcaaaat tacctgcgcc aaaaaatgtc
    37081 tatatggcgt accctttatc ccggggttga atccctgaac gttgccgtaa tgggctgcgt
    37141 tgtcaatggg cccggagaaa gcaaattggc cgacatcggc atcagcctgc ccggtacggg
    37201 agaaacaccc gtcgcgccgg tttatgtgga cggggagcgc aaaataacac tgaaaggtga
    37261 taatattgca actgaattcc tagctattgt agaggaatat gtcaaaacca actatggtga
    37321 aaacggctcc aaacgcaacc agaacaaaat catccctata cagtccctat aagacaaatg
    37381 ccgtcctgaa ctgttttcag acggcatttg tttctctcag atttcttatt aaaactgtaa
    37441 agaagcacgg ttctccaaga tttgatcaat cagaccatat tctttagcct cttcggcgga
    37501 catgaaatta tcacggtcgg tgtcgcgctc caaatctgcc aaatcgcggc cgcaatgttt
    37561 cgccatcagg cggttgagtt tttctttgat tttcaacagt tcgcgtgcgt gaatttcaat
    37621 atcggatgcc tgaccgccca agccgccgct gattaaaggc tggtgaatca taatccggct
    37681 gttgggcagg gcgaaacgtt tgcctttttc gcctgccgac aataagaacg cgcccatact
    37741 tgctgcctgc cccaagcaca aagtcgatac atcgggcttg ataaaattca tggtgtcgta
    37801 aatcgacata ccggccgtta ccgaaccgcc tggcgagtta atatagaaga aaatatcctt
    37861 atccggattc tcactttcca aaaacaacag ttgggcaacc accagattgg cggactcgtc
    37921 ggttaccggg ccgaccaaga atacgatgcg ctctttcaaa agccgagaat agatatcgaa
    37981 tgcacgctca ccgcgaccgc tctgctcgat aacggtaggg acaagatagt tatcaaaaga
    38041 catttcgtct cctttcatga tgtaaaagca ccaaagcggg ctttaaaagc ggcttcggtg
    38101 ctttcaaaaa ctgccctaag acggcatttt caggataatc aggcttgcgc acccatcact
    38161 tcgtcaaaag acaaagcttt ttcgtttact ttggctttac ccaaaacgaa atcaacgacg
    38221 ttgctttcta tcgccaaaga agtcggggct tgcaggcggg aaggctctgc gtagtaccag
    38281 tcgattactt cttgaggatc ttcgtagctt tctgcgaagt tggcgacaac ggctttgact
    38341 tgctcctcag tcggttccag tttgttttca tcaaccagtt tggccaaaat cagacccaaa
    38401 gacacgcggc gttcggcttg ttctttgaat atatccaaag gcagatccaa gttggcagca
    38461 tcagccatac cttggttaac aaaattttgt ttcatttcgt ttgccaagcg tgcggcttct
    38521 tcattgacca aagcaacagg tgctttcagc tctacggctt tgagcagcgc gttcattacg
    38581 gattctttgg tttgttcgtt tacgcggcgt tccacttcgc ggcttacgtt tttctgcact
    38641 tcttcgcgca ttttggcaac gtcgccatcc gcaataccca aggcttttgc aaaatctgca
    38701 tcgacttcag gcagagtcgc ttcggaaacg ttgttcagcg taatggtgaa cacggcagtt
    38761 ttaccggcaa cgtctttgcc gtggtattct tcagggaagt tgacggtaac gtctttactt
    38821 tcgccagcct tcatgccgac tacgccggct tcaaattcag gcagcatttg acctgcgccc
    38881 aatacgaagg cgtagttttt ggatgcgccg cctgcaaaag gttcgccgtc gattttgcct
    38941 tcaaagtcaa tgatgacgcg gtcgccgttt cgggcttcgc gttcgacatg gttgaagcgg
    39001 gtgcgttgtt tgcgcaggat ttctacggtt tggtccactt cggcatcacc gacggaagcg
    39061 gttacttttt caacttcttg tgcagacaaa tcgccgataa cgacttcggg gaacacttca
    39121 aaaatggcgg caactttgaa agattcttta tcgtcttgtt cttcaacgcc ttcaaaacgg
    39181 gggaagcctg ccactttcaa ctcttgggca acggcaacat cgtggaagcg gcgttgcacc
    39241 agctcgttga tcacgtcgtt ttgcgcgctc gcaccgtaca tttgggcaat catttttaaa
    39301 ggtgctttac ccgggcggaa accgtcgatt tttgcacggc gctgggtttg tttcagtttt
    39361 ttatcggttt ctgcgttgat ttcggaccaa ggcagggaca acactacttt gcgttccaga
    39421 ttttctaaag tttcaacagt tacgctcatc ataagccctt aaatttgttg tgttgataaa
    39481 atggtaaacc ttcttccctg catggggaag caaacagcgc aacggtacgg atatttgaac
    39541 cgcattgccg caaaggggag attttagctg gcaagtatat cacaatgttc cgcctgaaac
    39601 ataatatgcc gtctgaaacg ccaattccgc cgttcagacg gcattttgca atacgggcta
    39661 caaatggtcc ttgtgcgcca aaattttacg gctgccgttg aggtcggtgg gagaaacgac
    39721 acccgcattt tccagtgcct ccatcaggtt tgccgcgcgg ttatagccga tacgcaactg
    39781 ccgctgcaaa gacgaaatgg aggttttttt gctttccaaa acataggcga ctgcctgatc
    39841 gaacaattcg tcgctgtctg cattcggatt aacgatattg gcagtttcca gcgcggcctc
    39901 gccgctgagc agaccttcaa tatagtcggc tggggcttgc gatttgacgt agttgacgac
    39961 ttgatgtact tcgtcgtctg aaacaaacgc gccttgcagg cgggtcggtt cggcactgcc
    40021 gggctggagg aacagcgaat cgccatattt gagcagttcg tccgcgccca tttggtcgag
    40081 gatggtacgg ctgtcgattt tgctttgcac ggtaaacgcc atacgcgtcg ggatgttggc
    40141 tttaatcagg ccagtaacga catcgacact gggacgttgg gtggcgacaa tcatatggat
    40201 accggcggcg cgcgcttttt gggcgagacg ggcgatttgc tgctcgacgg ctttgcgttc
    40261 ggtcatcatc aggtcggcaa gttcgtcgat aacgaccaca atcatcggca gtttttccaa
    40321 aggctcgggg ttgtcggggt tcagactgaa cggattgagc agcggcttgc ctgccgcttt
    40381 tgcggcttcg actttttggt tgaagccttc cagattgcgt acaccggcgt gggaaagcag
    40441 gcggtagcgt ttttccattt cggcgacgca ccagttcaac gcctgccctg cttcgcgcat
    40501 atcggtcacg acgggacaga gcaggtgcgg aatgccgtcg taaatgctca actcgagcat
    40561 tttcgggtct atcataatga agcggacttc gtcgggcgta gctttgaaaa gcatagacat
    40621 aatcatgccg ttcacgccga cggacttgcc cgaaccagtc ataccggcga ccaaaaggtg
    40681 cggcattttc gccaagtcgc cgacaacggg ggtaccggca atgtctttgc ccagcgcgac
    40741 ggtcagcttg gatttggctc cggcaaacac gggcgaggac aagatttcgc tcaacatcac
    40801 gtcttggcgt ttatcgttgg gcaactcgat gcccatcgtg tttttacctg cgatggtttc
    40861 gacgatacgc acggattgca gcgacataga gcgtgccaaa tctttcgaca aggcaacaat
    40921 ttggctgcct ttaacacctt gcgcgggttc gatttcgtag cgcgtgatga cggggccgga
    40981 tgtggcggat acgacttgta cgccgatgcc gaattctgcc agtttggatt cgatcagttc
    41041 ggcagtgcgc tccaattcgg cgggattgat gctgacgggt tcgctgtcag gaatccgcaa
    41101 taggttcaat gtaggcttgt ggtattcgcc cgcctgccga ggttcgtcat cttcaaacag
    41161 agaaacctga attttgggcg acggcgcgac ggaaaccgcg acggatttgc ggttgctgct
    41221 gctgccttcg ggcaaggcaa cgggtttggc cgtaatattc ttggcttctt ttaccatgcg
    41281 ccgtgtattt tgggtatcga caccgtctgt tttgctattc ggccggcgtt ttcctaaagc
    41341 catgaccttg ccggataagg cactcaggcg gttttgaacc gccctgcccg caccgttcaa
    41401 aaattccagc catgaaatct gcaccagcag ggacaacgac aacagcagaa caaccaagat
    41461 aatcagcagg ctgcccgatt tccccagcag ccacgcaaac actgcgccga cgcgtatgcc
    41521 gaccataccg cctgctccga caggcaggga gtcggcatat tttccgccca gcacaaaata
    41581 ctccaagacg gggctgaaga ccgtcaggac aaacagcgcg gcggcagcga ttttgtggtt
    41641 gtatgcctca ttttccgtct gttttgcgtg cagacgaaaa tttttataca gcatgacgca
    41701 ggcagccgct atccaccacc agaacgacca gccgaaaaga taatagccga catcggcaac
    41761 atacgcgccg aacagtccgc cccaattggc gacatcttcc acaaccggcg aactgtgcga
    41821 ccaagacgga tcgcccatat cgaaactgat cagggaaatc gccaaataca aggttgccgc
    41881 caaacccatc agccacagtg cgtcgccgat aaggttgacg acatgttcgg gacgcgcctt
    41941 tttggtttcg gttttctgca actctttgac cgccttgagc cgctcggaaa ctttattgcc
    42001 ccgtgcgccg ttgtcggctt tcttgttgcg tgcggacgtt ggggacgggc ttcccgccct
    42061 gccttttgct gtttttttat gggatttttc tgtcatgccg tattaccgga aaatgccgtc
    42121 tgaaataagg aagccggacg gcttgcggat tgaatatgga aagtgtcgga ttatactcca
    42181 tttctcctgc tttcatcctg caacagacag acattgcctt tcagacggca tatctgttgc
    42241 ccgccatatg tatttttacg cagactctcg gcaaaccagt ataatccgtg ccgtttgaac
    42301 cgattgaaag aagatggtat gaaccaactg aaacttgccg tttccggcgc gcagatttta
    42361 tttgtggcat tcggcgcaat ggtgctggtt cccctgctga ccggtctgaa tccggctctt
    42421 gcgcttttgg gcgcaggctt gggaacgctg ctgttccaaa tcacaaccaa acgcaaagtg
    42481 ccgatttttc ttggttcttc gtttgccttt atcgcaccga ttatctactc cgtcggcgaa
    42541 tgggggctgc cttccaccat gttcggactg tttgccgccg gctttatgta ttttgtgttt
    42601 gccgcgctga tccgttggcg cggactggca gcggtacaca aactgctgcc tccggtcgtc
    42661 atcggccccg tcatcatggt catcggtctg tctgttgccg tggcggcaag cagcatggca
    42721 atgggtcagg cggacggcaa acaggtcatc gactataccg attcgctgat tctttccggc
    42781 tttacctttg ccgttaccgc catcgtatcg gttttcggca gcaggatgat gaagctgatt
    42841 cccatcttga tcggtgtcgc ttcgggttat gttttggcac tgctgatggg actggtggac
    42901 acggcaagca ttgcacacgc gccctggttc gccgttcccc attttgaaac gcctcaggtc
    42961 aactggcagg ctgcactgtt tatgctgccc gttgccgtcg cccccgccat cgaacacatc
    43021 ggcggcatca tggcaatcgg caatgtgacg gggaaagact atacgaaaga cccgggcttg
    43081 gacaaaaccc ttgcaggcga cggtttgggc gtatgcgttg cgggtctgat cggcggcccg
    43141 ccggttacga cctacggcga agtaacgggt gcggtgatga ttaccaaaaa cagcaacccc
    43201 gtcatcatga cttgggcggc ggtttttgcc gtctgcatgg cgtttttcgg caaattcaat
    43261 gcgtttttgg cttccattcc gatgccagta atgggcggca ttatgctgct gctgttcggc
    43321 acgattgctt ctttgggcgt gaaaacgctg attgatgcca aagtcgattt gatgctgccg
    43381 aaaaacctgg tcatcgtcag ctcggtactg accacgggca tcggcggcat gacgctcaaa
    43441 ttgggcagct tcagctttgc cggcgtgggc ttgtgcgccg tacttgccat tatgttgaac
    43501 agcctgctgc ccgatccgaa agaatcctga ccgtcgatat agaaatgccg tctgaacatc
    43561 tttcagacgg cattttccgt tttatttgag attttgaatc aaagagcgca cagttccgcc
    43621 gtaataagaa gaagatgtgc aatacactgt ttccaagccg cattgtccct gtacgccgta
    43681 ttttttgatg cactggttga gtgcgacctg atgaacgctc gtaaaacgcg gagaagtaat
    43741 cacgacggcg ttgtcgacac gcagcgcgcc caaggctttc gggtatgcca gcgcgacaca
    43801 ggtattgttc agcgacacga ccgaccggca tccggtcggc tcgtcttcgg caatgcccgc
    43861 aagcgtgtcc tgacctttgc aaaaggcttc caactcggca aacgcttcgc ttttcgtcga
    43921 atcttctttt gtagttttaa cctgcaaaac atcgtccgca ttctgcggat tctgccaaac
    43981 ggcgagatag ccgtaagtat cggcagcccg tgccgccgca gtcatcaggc atagtgccga
    44041 tacggccagt atctttttca tcatgataaa ttcccgacgg ttcgtccaaa ttctgttgca
    44101 ttataaacaa aaaacaggat aagtcccgcc ttatcggctt atccctcccc gcagattgca
    44161 ccgccgggta tggcaaaccg atttcggcag cgcaaatccg cataccgccg ccttagcggc
    44221 aagccgttgt tttcagacgg cattgcggcc aacctttgcg gcgggcgaaa aaccttgtcc
    44281 tataatttat cccgcttcaa aatcagcata cggtcggaaa tgcaaaaaat atctttcaat
    44341 ttgttgaaac ctgcaacccc ctgaaaatag ggaaacgccg ccccggtttg aacggtgcgc
    44401 cgcatattcc gatgccctcc ccccgatacc ttccggcaag cccagaaatg cccagcaaca
    44461 atatccatcc ggcaaaaatc cgaaacaaca cacccggtgg caggcagagt caaaccgccc
    44521 cgcaaagcat ccgccatcag aaaaacaaac cgcctccgag ggcttcatcc taaagggcgt
    44581 attgttcgat aatggtttgg gttataatcc cctatcgatt ctccacgtcc gtgagacact
    44641 tcagctatgg aaaccccgac caacaccccg caacgctccc tgcgtcaaaa cagtatctac
    44701 ctgctgccca actcctttac catcgccgcg ctgttttccg cattttacgc aatcacccaa
    44761 tccatgcacg gacgttatga aaccgccgcc atcgcggtat tcatctctat gttgctggac
    44821 ggtatggacg ggcgcgtggc gcggctgacc aacagccaaa gcgcgttcgg ggagcagctc
    44881 gacagccttg ccgatatggt cagcttcggc gttgctcccg ctctgattgc ctacaaatgg
    44941 cagctttggc agttcggcaa aatcggttat tccgtcgcct tcatctactg cgcctgcgcc
    45001 gccctgcgcc tcgccctgtt caacacactc atcggcaagg tggacaaacg ctggtttatc
    45061 ggcgtgccca gtccgactgc cgccgcgctg attgtcgggc tgatttgggt caaccacagc
    45121 gtcgaaaaat tccccgccgt ccactggtgg gcattgggca tcacactgtt tgccggcctg
    45181 tcgatgattg tccaaatccc tttttggagt tttaaagaaa tcaacatccg cagacaagtc
    45241 ccctttgtcg gaatgctgct tgccgtctta ctgctgcttc tggtcacttg ggaaccgtcg
    45301 ctcgtcctct tcctgttctt tctcggatac agcctgtccg gctacattat ggcggcacgc
    45361 cgattttgga aaaaatacag aaaggcggat taaatgtggc attgggacat tatcttaatc
    45421 ctgcttgccg taggcagtgc tgcaggtttt attgccggcc tgttcggcgt aggcggcggc
    45481 acgctgattg tccctgtcgt tttatgggta cttgatttgc agggtttggc acaacatcct
    45541 tacgcgcaac acctcgccgt cggcacatcc ttcgccatca tggtcttcac cgccttttcc
    45601 agtatgttgg ggcagcacaa aaaacgagcg gtcgactgga aaaccgtatt tgcgatgatg
    45661 ccgggtatga tattcggcgt attcacgggc gcactctccg caaaatatat ccccgcgttc
    45721 gggcttcaaa ttttcttcat cctgttttta accgccgtcg cattcaaaac actgcatacc
    45781 ggccctcaga cggcatcccg cccgctgccc ggactgcccg gactgactgc ggtttccaca
    45841 ctgttcggcg caatgtcgag ctgggtcggc ataggcggcg gttcactttc cgtccccttc
    45901 ttaatccact gcggcttccc cgcccataaa gccatcggca catcatccgg ccttgcctgg
    45961 ccgattgcac tctccggcgc aatatcgtat ctgctcaacg gcctgaatat tgcaggattg
    46021 cccgaagggt cactgggctt cctttacctg cccgccgtcg ccgtcctcag cgcggcaacc
    46081 attgcctttg ccccgctcgg tgtcaaaacc gcccacaaac tttcttctgc caaactcaaa
    46141 aaatccttcg gcattatgct gcttttgatt gccggaaaaa tgctgtacaa cctgctttaa
    46201 aacacacgaa aaaacctttt taccgtttgc acaagcaatt aatcaggaca aagctgccct
    46261 gcctcctgtt ccgacaaaag gacagacaac ctgaccgtgc gcccgacttt tacccttaac
    46321 ttcttctgcc cacagattcc attgcctttt tccaaactgc cgattgcccc gccttcacgc
    46381 ccgaaggcat cggcgcatcg cctgccgtgc cgattccacg cgatgcggct gcctcccaaa
    46441 cggtatttcc gccataatga ccggtataca agccgcaacc tttgcaatca tatatataag
    46501 ttattaaatt tttaggatgt attttgacaa tctgttgatt tcaactgctt gcaagggaaa
    46561 aggccattat ttttcggtca atcaggaagt tatcctattg aacattttga aacaaagtat
    46621 gttatcagca ccatattgaa acacagccaa attttatgcc cgataccatt ttcaaaataa
    46681 ataatcccct gattttcaca gatttctcaa aatcagaaaa gtttttgtca attgaatatt
    46741 ttggctgtgt tttagtaatc tgttgatttc aattatttgc aagggaaaag acaattattt
    46801 tttcggttag gaagagatct atcctattga gtatattgaa gccaggtacg cttatcaaca
    46861 ctatattaaa acacagccaa tattttttgg cgcattttat gcatcaaatt tcgttaacaa
    46921 actattcctg caaagaccac aggcaaatat agtggattaa caaaaatcag gacaaggcga
    46981 cgaagccgca gacaatacag atagcacggc aaggcaaggc gaggcaacgc tgtactggtt
    47041 taaatttaat ccactataaa aacaaccatc ccgatttttg cagaatatac ggaaaacaaa
    47101 acaaataccg tctgaaacca cattccgaca atcggcaggg tttcagacgg catctgataa
    47161 tttcaattac tcggttgcgg caacgacggc aacggtaatt ttagcaacgg catcagtgtg
    47221 caaagccact tccacttcgt actcgccaac ggctttcaga ggaccgttcg gcagacgtac
    47281 atttgctttc acggcttcga tgccggcagc aacgattgca gcagcaatgt cggcattggt
    47341 aacggaaccg aacaggcggc cgtccacacc ggctttttga gcaacggtaa cggtttgacc
    47401 gtccaatttt tcctgacgga ctcgggcatc tgccaaaatt tcagcctgtt tggcttccaa
    47461 ttcggcacgg cgtgcttcaa actctttcat attcgcttcg gtcgcacgtt ttgccttacc
    47521 tgcgggaatt agaaagttgc gggcgtagcc gtttttaacg gttacgatgt cgcccaagtt
    47581 gcccagaccg ccgatttttt ctaacagaat aatttgcatg attcaatctc caaaattatt
    47641 tgtgttggtc ggtgtaaggc agcagagcca ggaagcgtgc gcgttttacg gcaacagcca
    47701 attggcgttg gtagaatgcc ttcgttcctg tgatgcgtgc aggaatgatt ttaccgtttt
    47761 cagagataaa gtctttcagc aaatcaactt gtttgtaatc gacttcttgg attttttcag
    47821 ccgtgaaacg gcagaatttt ctacgtttga atgattgacg agccattgtc gtttaacctt
    47881 tatattcttg aatattttgt atcctgagca tcggcataag ggaacgtctg cttttttgag
    47941 ctaaaaaacc ttcgacgtga acatatacac cttgccgata ctgccactct tccgcctgcc
    48001 tgcctaaaat ccgtgccgga atttccaatt ggacaaggca ttgctgcccg ttttcctcct
    48061 gccacgattt gtgctttaaa ataatatcta aaacagggat tccggcaggc gtatatcgaa
    48121 tagggaaaac cttttcaatt aacgcggcaa gcgaaacaag attattgaat cccaattatt
    48181 gggcgaccgc ttcttcagac gcaccgctca acaggttctt agccttttca ccacccaaca
    48241 taggggatgc ttcggtaacg gcgtgtttgg ttttgatggt tagatggcgc aatacggcat
    48301 cattgaagcg gaatgcggtt tccagctctt caaccacttc gggagtggtt tcgatgttca
    48361 tcaaaacata atgtgcttta tggattttgt taatcgggta agccagttgg cggcggcccc
    48421 aatcttccaa acggtgaatc ttaccgtttg cctcggtaat catggttttg taacgttcaa
    48481 ccatagcggg cacttgctcg ctttgatcag gatgaacgat aaacacgatc tcgtaatgac
    48541 gcatgttatc tccttatgga tggtaaaaac agccttctgc catgcgaaag cagaaggcaa
    48601 ggttcaaata gcaggcatta tattggggtt tgccgacgga atcaaggatt tggtacgaaa
    48661 aacttgcatt ccgccgaaaa tttcggtttc agacggcatt caaatgtttt ggctgcccag
    48721 ccaacgttcc gcgtccaaag ccgcctgaca gccggaggcc gcgctggtaa ttgcctgacg
    48781 gtaggtatgg tcttttacgt cgcccgccgc ccatacgcct tcgatattgg ttgcaccgac
    48841 attgtccgcc gtgccgcctt ttgttttcag gtagccggct tcgtccattt ccaactgccc
    48901 tttgaaaata tcggtattcg gcttgtgccc gatggcgata aagatgccgc tgacggcaat
    48961 ttgttgatca gaaccgtcgt tgttttttaa taatgcgcca tttacgcccc gatcgtcgcc
    49021 cagtacttct tgcaggttgc tttccagctt gaggatgatt ttgccctctt ccacgcgttt
    49081 catcagtttg tcaatcatga ttttttcagc acggaactcg ctgcggcggt gaatcagcgt
    49141 aacggttttg gcgatattgg caaggtagag tgcctcctca actgccgtat tgccgccgcc
    49201 gactacggca acatcttggt ttttgtagaa gaaaccgtcg caggtggcgc aggcggaaac
    49261 gcctttccct gcaaacgctt cctcactcgg caaaccaagg tatttggcgg acgcgccggt
    49321 ggcgacaatc agggcatcgc aagtgtactc gcccatatcg cctttgagtg cgaacgggcg
    49381 tttttgcaga tcgacggcgt tgatttggtc aaaaatgatt tccgttccga aacgttcggc
    49441 gtgggcgaga aaccgcgcca tcaattccgg cccttgcacg ccgtcggcat cggcaggcca
    49501 gttgtccact tcagtcgttg tcatcagttg cccgccttgc gcgatacctg taataatgac
    49561 ggggtttaaa ttggcacgtg cggcatagac ggcggcggtg tatccggcgg ggccggaacc
    49621 caaaataatc agtttgcggt gttgggacat tgtttttcct ttgctgtgtc aagttttcgg
    49681 attctacccg aattatcggc gcgtttgaga aattttgacc ataccggcgt tcagacggca
    49741 tcccgcagcc ttgactgccg tctgaacatc aaaacgggaa tcaaacttat gcaacaaaaa
    49801 atccgtttcc aaatcgaggg gatgacctgt caggcatgtg cttcgcgcat tgaaaaagtg
    49861 ttgaacaaaa aagattttgt cgaatcggcg ggagtgaact ttgccagtga ggaagcgcag
    49921 gttacgtttg acggcagcaa aacctcggtt gccgacattg ccaaaatcat tgagaaaacc
    49981 ggttacggcg cgaaggaaaa aacggaagat acattgccgc aacctgaagc agaacaccat
    50041 atcggctggc ggttgtggct tttgctgacc atcaatatcc cgttccttat cggtatggta
    50101 gggatgatgc taaaagggct gaattggaca cggcacgatt ggatgattcc gcctgtatgg
    50161 cagtttgtac tggcaagcat agtgcaactt tggctggcaa tcccgtttta caaaagcgcg
    50221 tgggcaagca ttaaaggcgg gctggcgaat atggacgtac tcgttaccat cggcacggtg
    50281 tcgatttacc tgtattccgt ttatatgctg tttttcagtt cgcatgcggc gcacggtatg
    50341 gcgcatgtgt attttgaagc gggcgtgatg gtgatcggtt ttgtgtcgct gggtaagttt
    50401 ttggaacacc gcaccaaaaa atccagcctg aacagcttgg gcttactgct aaaactcacg
    50461 ccgacccaag tcaacgtgca acgcaacggc gaatggaaac aactgcccat cgaccaagtg
    50521 caaatcggcg accttatccg caccaaccac ggcgaacgca tcgctgccga cggcattatc
    50581 gaaagcggca gcggttgggc ggacgaaagc caccttaccg gcgaatccaa tcccgaagag
    50641 aaaaaggcgg gcggcaaagt gttggcgggc gcgctgatga ccgaaggcag cgtggtgtac
    50701 cgcgccgcgc agctcggcag ccaaaccctg ctcggcgaca tgatgaacgc gctctctgaa
    50761 gcacaaggca gtaaagcacc gattgcgcgc gtggccgata aagcggcggc ggtatttgtg
    50821 ccaactgtcg tgggcatcgc gcttctgact tttatcgtta cttggctgat taagggcgat
    50881 tggacggtcg cactgatgca cgccgttgcc gttttggtga ttgcctgccc gtgcgcgctc
    50941 ggtctggcga cccctgccgc gattatggtc ggcatgggca aagcggtgaa acacggcatt
    51001 tggtttaaag acgcggcggc aatggaggaa gcagcccacg tcgatgccgt cgtattggac
    51061 aaaaccggta cgctgaccga aggcaggccg caggttgccg ccgtttatta cgttcccgac
    51121 agcggctttg acgaagacgc tttgtaccgc atcgccgccg ccgtcgagca aaacgccgcc
    51181 cacccgctcg cccgcgccat cgtctccgcc gcacaagcgc gcggtttgga gattcccgct
    51241 gcacaaaatg cgcaaaccgt tgtcggaaca ggcattaccg ccgaagtgga aggcgtgggt
    51301 ttggtgaaat caggcaaagc cgaatttgcc gaactgacct tgccgaagtt ttcagacggc
    51361 gtttgggaaa tcgccagtgc ggttaccgta tctgtaaacg gcaaaccgat cggcgcattc
    51421 gcactctccg acgcgttgaa agccgatacc gccgaagcca taggccgtct gaaaaaacac
    51481 aatatcgatg tctatattat gagcggcgat aaccaaagta cggtcgaata cgtcgccaaa
    51541 caactgggca tcgcacacgc cttcggtaat atgagtccgt gcgacaaagc cgccgaagtg
    51601 cagaaactca aagccgccgg caaaaccgtg gcgatggtcg gcgacggcat caacgacgcg
    51661 cccgcgcttg ccgccgccaa cgtcagcttc gccatgaaag gcggtgcgga cgttgccgaa
    51721 cacaccgcct ccgccacgct gatgcagcat tcggtcaatc agctcgccga tgccctgctg
    51781 atatcgcagg caacgttgga aaacatcaag caaaacctat ttttcgcctt cttctacaat
    51841 atattgggca ttccgctcgc cgcgctcggc tttttaaatc ccgtcatagc aggcgcggca
    51901 atggcggcaa gctcggtttc ggtattgggc aatgccctgc gcctgaaatg ggtaaaaatc
    51961 gattgaccgc atataaccgc ccgacagctt ttccgaacgg ataaggctgc cgctgccgat
    52021 atgccgtctg aagccgtttt tcaaatgatt gatatgaata cagaaaaccg ttctccggaa
    52081 caattcgaca tcccgctctt cctcaaaaac ctgcccaagc tgccgggcgt gtaccgtttt
    52141 tttgacgaag gcggcaacgt cttatacgtc ggcaaagcgg tcaacctcaa gcggcgcgtg
    52201 tccggctatt tccaaaaaaa cgaccattcg ccgcgcatcg cgttgatggt gaaacaggtt
    52261 cgccacatcg aaaccaccat cacgcgttcc gaagccgaag ccctgattct cgaaaacaac
    52321 ttcatcaaag ccttgtcgcc gaaatacaat atcctttttc gcgacgacaa aagctatcct
    52381 tatttgatgc tcagcggcca tcaatatccg caaatggcgt attaccgcgg cacgctgaaa
    52441 aatcccaacc aatacttcgg cccgtatccg aacagcaacg ccgtgcgcga cagcattcaa
    52501 gtgttgcaaa aagtcttcat gctgcgtacc tgcgaagaca gcgtgttcga acaccgcgac
    52561 cgcccttgcc tactgtacca aatcaaacgc tgtactgcgc cctgcgtcgg acacatcagc
    52621 gaagaagact actgcgacag cgtgcgtcaa gccgccactt tcctcaacgg caaaaccgac
    52681 gaactgaccc gcaccctgca acacaaaatg cagaccgccg ccgcgaatct gcaatttgaa
    52741 gaagccgccc gttatcgcga ccaaatccaa gcactcggca ttatacagag caaccagttc
    52801 atcgacagca aaaacccgaa caaccccaac gatatcgacc tgctcgcgct cgccgtttca
    52861 gacggcatcg tctgcgtaca ctgggtcagc atccgcggcg gacggcacgt cggcgacaaa
    52921 agtttctttc ccgacaccaa aaacgacccc gaaccaaacg gtcaagatta cgccgaagcc
    52981 ttcgtcgccc aacactatct gggcaaaagc aaacccgaca tcatcatcag caactttccc
    53041 gttcccgatg cgttgaaaga ggctttggaa ggagaacacg gcaagcagat gcagttcgtt
    53101 accaaaacca taggcgaacg caaagtttgg ttgaaaatgg cggaacaaaa cgcacaaatg
    53161 gcgattaccc aacgccacct gcaacaaagc aaccaacaac accgcatcga cgaacttgcc
    53221 aaaatcctcg gcatgaattc agacggaatc aaccgccttg aatgtttcga tatcagccac
    53281 acgcaaggcg aagccaccat cgcctcctgc gtcgtgtacg acgaacaaaa catccaaccc
    53341 tcgcaatacc gccgctacaa catcaccacc gccaaacccg gcgacgacta cgccgccatg
    53401 cgcgaagtgt tgacgcgccg ttatggcaaa atacaggaag ccgaagccaa cggcgaaagc
    53461 gtcaaatggc cggatgtcgt gttgattgac ggcggtaaag ggcaaatcgg cgtagccgta
    53521 tccgtatggg aagaactcgg gctgcacatc cctttagtcg gtattgccaa aggccccgaa
    53581 cgcaaagccg gcatggaaga actcatactg ccttttaccg gcgaactctt ccgcctgcct
    53641 cctaatagcc cggccttgca tttattgcaa accgtacgcg atgaatcaca ccgctttgcc
    53701 atcacaggcc accgtaaaaa acgcgacaaa gcacgcgtta cctcgtctct cggcgacatt
    53761 cccggtgtag gcagcaaacg ccgccaagcc ctgcttaccc gcttcggcgg actgcgcggc
    53821 gtgattgccg ccagccgcga ggacttggaa aaagtggaag gcatcagcaa ggcattggcg
    53881 gaaaccattt ataatcatct gcattagtat gccgccaaag caaaaaccgc ctgtaaaaat
    53941 atgatacagc aggccggcat accgatataa acctaacttc atgacgaata acgatgattc
    54001 gacaaaacgg aaaacgatct gatatgaaca atcccgactt accctatcgg caggccttgg
    54061 aacgcctgtc tcaaaaacaa tattataact ttaccgaagt ccgccgactg ctgacagaag
    54121 cggcctcggc agatcatccc gccgccgcat tcaagttggc aaaacacctg atgaacgcgg
    54181 acagcccgca ccaagaccgc gaacaaggta tggaaatgct ccgcatcgcc gccgaacagg
    54241 ggcatcccta tgcgcgttac aatttggcat atatccaaga attggaaggc gcgcccccgg
    54301 aaaccctgat accgctttac aggcctctgg cagaagcagg cctgcccgaa gcgcaagtcc
    54361 gcctgatgta ccttctgtac gcgtcccgac attttgaaga agccctggaa tgggcaaaac
    54421 aagcgcaaaa aacaacaatc cccgcgggca atacctgctc gcccaatact gccggcacgg
    54481 cacgccgccg gattttgaaa cggcgcacct gctctaccgc aaagcggcgg cacaaggctt
    54541 gccggaagca cattggcaac tcgggctgca ataccgtttc ggacaaggga cgaaagccga
    54601 cacggcacag gccgtcaatc atttgcgcgc cgccgcgcaa caaggataca ttcccgccta
    54661 caccccgctt gccgaactca tcctacctac ggctcccgat gaagccgttt accggttcca
    54721 acaggcggca caggaaaatg accccgatgc ccatgccgca ctggccgaca tctacctgca
    54781 aggcaagtat ctggaaagaa accacaaact tgccctgcat catgccgaag cagccgccgc
    54841 cgaacgccat cccgaaggtt tgcggatacc gggcgacatc tgccgctacg gtttgggcat
    54901 agccctcgat acggaaaaag cccggcatta ttaccggcag gcagccgaag ccggcagcct
    54961 taccgcctat cagaaactca tatccgacag cgcgttaaac catcccgagc aatatgacgg
    55021 catcaaagat tccgccatta ggcggcaaag ggcagaacag ctttatcaaa aagcccaagc
    55081 cctgcattac ggattacaat gcgcgcccga atacgcagcc gcgctcaaac tctacacaga
    55141 agcagcagaa ctcggacaca gcaaagccca aaccaatctg ggcagtatgt actacttcgg
    55201 acagggcata gccgccgact actgcaaagc ccgcaaatgg tttgaacaag ccgccgcgca
    55261 aaaagacagt atggcgttct acaacctcgc ctgcatccat tacagcggac acggtgccag
    55321 gccggacaaa gaaaaagcct gccgctacct gcaagaagcc ataaacaacg gatacgggca
    55381 aaaaagcgtc ctgcaagaac tgctgcaaca gtggcaaaat gccgtctgaa cagagttaca
    55441 cctaccctgc cgaaacgaaa caggtataat cgcccctttc ccttcccgcc gtccgaacag
    55501 gcctttcaca ttcagacggc atcctgattg cacaagcgca cagaagcatt atgacagaca
    55561 ccgccgaaaa ccaaacacca aacgaccgtc aagccggaca cccccgcagc atccgcagtt
    55621 tcgtcctccg ccaaagccac atgaccgccg cacagcaacg cgccatcgat accttatggg
    55681 acagcttcgg catcgactac caagcaacac cggccgatct tgatgcccgt ttcggaagca
    55741 gccgacctaa aatcctcgaa ataggcttcg gtatggggat ggcaagcgca gaaatcgccc
    55801 gccgcctgcc cgaaaccgac tttctcgcca tcgacgtaca cggccccggc gtaggcaacc
    55861 tgctcaaact catcaacgaa aaccatttgg aaaacatccg cgtgatgcgg cacgatgccg
    55921 tagaagttgt cgaaaatatg ctgcaagacg gctcgctcga cggcatccac atattcttcc
    55981 ccgacccgtg gcacaaaaaa cgccaccaca aacgccgtct gatacaagcc cccttcatcg
    56041 ccaaactact gcccaaactc aaaaccggcg gctatatcca cctggcgaca gactgggaag
    56101 aatatgcaca gcagatgctt gaagtcctca gcagcttcga cagcctgcaa aatacggcgg
    56161 cagactacgc ccccactccg gactaccgcc ccgaaaccaa attcgaagcg cgcggcaaac
    56221 gcctcggaca cggcgtttgg gacttggtat tcaaacggat cggataacag accgccggat
    56281 aaaaaatgcc gtctgaagca tgtttgctta cagacggcat tctttcaaga taaagcagcg
    56341 ggcgatgttt caatacaagt tttgaaacaa tggtttgaac ggcaaaaacg cgtgtatacc
    56401 gcacgcatcc ttgtaggttt taacctgcac atcggtttta aagtttattc cgcccgcaga
    56461 tagtggcaca cggttggcgg agatgcaggc tacggcttgc taattattca tcgttaccaa
    56521 aagaagactt aggtgtacat tcaggcatag ttaacaaaac aactaaactt ctatttactg
    56581 gaaaataaaa tgacatattt aaaagtaata gcaattagta tagttttata cattttatta
    56641 ttgcaaatta atcttaaaat gttagaaaaa aggattgatt tcttagtaga aaatatagat
    56701 aaatattacc agcaatatgg atcttaccca aataattttg attttatatc aactaaaact
    56761 gattttacca ctgaatcata ttgtgatttt tgggataaaa atattgcagg atatggtaat
    56821 tgttacttcg taaagaatga taaagactat actattttag tcatgggttt ctcatcgaaa
    56881 atactatttt catctcacaa taaaataaaa gaattcaatt caaataaata tgattaaata
    56941 caacaagcaa gccgtagccc gcataaaatc tttagttttc cgtagatcgg attctcgaat
    57001 ccgacatttt ggtaattgct gcaatggatt gcaacgatgg aaatgttaaa ggctttgtcg
    57061 gatacaagta tccgagctac gcttgctggt gatatttgaa tcggattcaa atatctttgt
    57121 tgcggctatt aatatttttc cggataaagg tagccatgcc tcatggttat ccaaataaag
    57181 caggacttat agaaaaataa attcacttta atttcattgc tctaatggtt ttcagaccgg
    57241 gaagtttgac ttaagcactt aatatagata tcatttaata aaaaataaaa tatttacata
    57301 cacactgcaa ccttttttct actccttaat agaaaggatc ttacaatgcc tcgtttcccc
    57361 cgcactttac cccgcctgac cgctgtcctg ctgttggcct gtaccgcttt ctccgccgcc
    57421 gcacacggca atcacaccca ttggggctat accggacacg actctcccga aagctggggc
    57481 aatctgtcag aagaattccg tttgtgctcc accggcaaaa accaatctcc ggtaaacatt
    57541 accgaaaccg tttccggcaa actgcccgcc atcaaagtca attacaaacc gagtatggtt
    57601 gacgtggaaa acaacggcca caccattcag gtcaattatc ccgaaggcgg caataccctg
    57661 accgtgaacg gccgcaccta taccctgaaa cagttccact tccacgtgcc gagcgaaaac
    57721 caaatcaaag gccgcacttt cccgatggaa gctcacttcg tccacttaga cgaaaacaaa
    57781 cagcctttag tattagccgt gctgtatgaa gccggcaaaa ccaacggccg cctgtcttcc
    57841 atctggaacg tcatgccgat gaccgcagga aaagtgaaac tcaaccaacc gttcgacgca
    57901 tccaccctac tgccgaaacg gttgaaatac taccgctttg ccggttcgct gaccacgccg
    57961 ccgtgcacag agggcgtatc atggttggtg ttgaaaactt atgaccacat cgaccaagcg
    58021 caagcggaaa aattcacccg cgccgtcggt tcggaaaaca accgccccgt acagcctctg
    58081 aatgcacgtg tagttattga ataagtagta aagttgtaaa cggaaaaggc cgtctgaaaa
    58141 ttcagacggc cttgttgttt atgtatagct aggatgtgtg atgcaagctg cgtacatgat
    58201 ttcaaggatt cctgataaca caatgagcgc gcgccagtgg cgcacacgct atgtattcag
    58261 gctgcgatta ctatttcaaa atcactccgc cccaaacaac aaattctctt taatattcct
    58321 aatcctatcc ctcaacacag cagcttcttc aaactgtaaa tccctagccg cctgctgcat
    58381 ggctttttcc agtttggcga tttctttaat cgcgtcttct tcgttgtgga tttcgccgac
    58441 tttgaccttg tttttgcctt gtctacggcc tttgccactg tcttcttcgt ggtacacgcc
    58501 gtcgatgatg tctttgacct gttttttaat ctgctgcggc acgataccgt gttcttcgtt
    58561 gaatttaatc tgtttttcgc ggcggcgttc ggtttcgtcg acggcggctt tcatggagtc
    58621 ggtaattttg tcggcgtaca ggatggcgac gccgttcacg ttgcgcgcgg cgcggcctat
    58681 ggtttgaatc aggctgcggt gggagcgcag gaagccttct ttgtcggcat cgaggatggc
    58741 gacgagggag acttcgggga tgtcgaggcc ttcgcgcaac aggttgatac caacgagtac
    58801 gtcaaacagg ccgagccgca aatctctaat gatttcaacg cgttcgacgg tgtcgatgtc
    58861 gctgtgcagg tagcgcactt tgatgccgag ttcgctgtaa tagtcggtga gttgctccgc
    58921 catgcgtttg gtaagggtgg taacgagcac acgttcgcct ttttgaatac ggtcgttgat
    58981 ttcgctcatt aaatcgtcga cttgggtggc gacggggcgg atgatggttt gggggtcgac
    59041 cagccctgtg gggcggacga cttgttcgac gacttgtccg gcgtgttctt cttcgtattt
    59101 cgcgggggtg gcggaaacga agacggtttg cggcatgact ttttcaaatt cgtggaattt
    59161 gagcgggcgg ttgtcgcggg cggaaggcag gcggaagccg tagtccacga ggttttgctt
    59221 gcgcgatgcg tcgcctttgt acatgccgcc gatttgggta acggtaacgt ggctttcgtc
    59281 gatgaacatg atggcgttgt cgggcaggta gtccatcagc gtgggcggcg gttcgccttc
    59341 ttttttaccg gagaagtggc gggagtagtt ttcaatgcct ttgcagaagc ccatttcgta
    59401 gagcatttcg aggtcgaaac gggtgcgctg ttcgatgcgt tgttgctcga cggggcgttg
    59461 ttcgcgagcg aaaaattcga tgcgttcgcg caattcttct ttgatggatt cgcaggcgcg
    59521 caatacggtg tcgcgcgggg taacgtagtg gctggacggg aagacggtgt agcgtccgac
    59581 acgctggtgc aggctgcctg aaagcgggtc gaacatatcg aggcggtcga tttcgtcgtc
    59641 gaacaggctg atacgcaagg cgttttcgga gctttcggcg gggtacacgt caatcacgtc
    59701 gccgcgcacg cggaagctgc cgcgtttgaa gtccaaatcg ccgcgttcgt actgcatgga
    59761 aacgagcgtg gcgatgatgt cgcgctgctc gatggtgtcg ccttctttga cagacaacac
    59821 catttgctga tactcggtcg ggtcgccgat accgtaaatg gcggacacag tggcaacgat
    59881 aatcacgtca tcgcgcgtca tcaggttttt ggtggcagaa aggcgcattt gttcaatgtg
    59941 ttcgttgatc gcactgtctt tttcgatgaa caaatcgcgg cttggcacat aggcttcggg
    60001 ttggtaatag tcgtagtagg agacgaaata ttccaccgcg ttttcaggga aaaactcgcg
    60061 catttcggca taaagctggg cggcaagggt tttgttgtgc gccatgatga tggcgggtcg
    60121 gccgctttgg gcgatgacgt tcgccatggt gtaggttttg cccgaaccgg ttacgccgag
    60181 cagggtttgg taggcaaggc cgtctgaaag cccttcgagc aagtcggcaa tagcggtagg
    60241 ctggtcgcct gcgggcggga agggttggtg gagtttgaaa ggggaatcgg ggtatcggat
    60301 gacttccata atcttgcctg tgatgcgttt gcggacaaag cgtgtagtag ggatgggtcg
    60361 gaaacgtctt tcagacggca taaggcggtg aaatcctgaa tgtatgccgt ctgaaaccca
    60421 atcgctaccc aagtatagtg gattaacaaa aaccagtacg gcgttgcctc gccttgccgt
    60481 actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaac ccactataaa
    60541 tgccgcacgg ttcaaattcc ggtaaaaaat cgctcataac ctgtcctttc aaacataata
    60601 tgccgtctga aatcctttca gacggcatcg taaaaaccta cttcttatct tttttatctt
    60661 tcttatcttt atttaaaacc ggctttttcg ccgccagccc caaagacttc tgccactgct
    60721 cgggcgactt gaccaaatcc aaagctttcc gcaactggtc gtctttggca gggttgggaa
    60781 tccgccttga agacaaatcc tcgtcctttt tctttttacc tttttctttt acagcgggct
    60841 tatccgcatc tttttcaagc ggcacggcaa gggtttcact gttcacatcc tcgccgccca
    60901 aaggattgcc gatgtgtccg accaaatccg cctcgcggct ttcaaaaatg cgttccttat
    60961 cttttacttc gacatcggga acaatcccct gcgcctgaat agaacggtcg ttcggcgtat
    61021 aatacagtgc cgttgtcagc ttgaccgcgc tgccgttgga caaaggaatc aaagtctgaa
    61081 ccgaaccttt gccgaagctc tgcgtaccga cgatgaccgc gcgtttatga tcctgcaatg
    61141 cacctgcgac aatctccgac gcggaagccg aaccggaatt gaccaatacc gtcatcggta
    61201 tggttttcaa ctcggcagga atgcccgcca acgaatcgcc gcccatcccg tacacataat
    61261 cttcaggaat ggctttcagt accatgcggt ctttgccgtc gcgtcccttg gtgctgacga
    61321 cgactgcttc agacggcaga aatgccgccg acacgccgac cgcgccagtc aaaagcccgc
    61381 cggggtcgtc gcgcaaatcc aacaccagcc ccttgagcgg ttttccttta ttttccttta
    61441 ccagctcttt tgcggcggta ttgacgcttt cgaccgtccg ctcttggaac tgcgacacgc
    61501 ggatatagcc gtaatcgggt tcgatcaggt gatggcggac gcttttcact ttaataatgg
    61561 cacgggtcag gttgacgact atcggcttgt cggcattttt gcgcgacagc gtcaaagtaa
    61621 tcttcgtacc cggcttgccc cgcattttct tcaccgcttc gctgaccgtc atgccgcgtg
    61681 tcgaaacatt atcgattttc acaatgaaat cgccgctttt cacccccgcc cgttccgcag
    61741 gcgtgtcctc aatcggcgaa accactttga caaatccgtc ttcctgcccg atttccatcc
    61801 ccaagccgcc aaattcgccg ctggtggact cctttatctc ggcataacct tttttatcca
    61861 tatattcgga atgcggatcc aaaccggcca ccataccctt catcgcacct tcaaacaaat
    61921 cggcatcggg tttgtcctga tagtagtttg ccttgatttg accgtaaacc tccgccattg
    61981 tgcggatgga ttgcaccggc aggacttcgt tatcccgcct gtccttctcg gcggcaaaac
    62041 cctgcaccgc cagactgacg gccacgccgc tgattgcacc caaagtataa agtgcgattt
    62101 tcttaaaaac aggtttcgac attcttcttt aactttctct cttgatttcc aaaaaccgga
    62161 aaatacaggt acggcaaacg gcaaacttca cggaacagcg caccatatcg gcacgatttg
    62221 cataaagcct accgtttcgg caatccgatc aacgtatcca gctcgaaggg ttcaatacct
    62281 gaccttgata acgtatttgc aggtaaagcc cctcttcccc gtccggcagc gacccgctcg
    62341 agccgatttt gcttcctgcc gcgaccatat aacccttgcc gacggaaatt tcgctcaaac
    62401 cggcatagat gctgatgtag ttctcgccgt gatcgaccac gaccactttg ccgtagccgt
    62461 ccaactcgtc cgcatagctt accgttcccg gcgcaatgct ttcaaccgtt gccggtgcag
    62521 tggaatagaa cacgcctttc caaacatcgc cgccgctccg gttctgcccg aaaagtccgg
    62581 tcggcacacc gtcaaccggt tttttcaaac gtccttgcat gcggctgaaa ccgtcggcac
    62641 tgccgatacc cataaccgaa ggcgcttgga tgttcctgtc ttcggcggtc aggttggaca
    62701 tttccgcacg tcgtgcttca gccttctgct gcgccgcttc ttttctggct ttttcggctg
    62761 ccgccagtct ggcttcagcc aattttcttt ttgcttccgc atcctgaatg cggtgttcgg
    62821 cctttttctt ctccaaattg ctcaagagct tgttcagctg ctgctcgttc cctttctgtt
    62881 ccagcagttt tcgggcatct ttggcgattt tggcattctg tctgcggctt tccgtctgtt
    62941 ccgccgcatc ggttacaccc tgttttttca gcagagattg cacgtttgcc tgaattttct
    63001 tcaaacgggc aagctcattg ttgattttct gctcttgtac cgccaaagcc ttctgctgtt
    63061 tttccaaatc cttgacaact tcccgattgg aggcgtttac ataacgcgta taacgcaaaa
    63121 agcggttttt ctgacccggt tcggcgtttt tcaggaacag ggcaaccgca ttcggctggc
    63181 tgtttttata gttccccgat acgaaacggg aaatctgcgc tttcgtagcg gcgacttccg
    63241 ttttcaaacg gttcagctcg gtattgagtt tttggaactt gtcccaagcc tcgcgctgtt
    63301 tgcggttgac ggaagcaagg ttgccgcgcg cctgacggat acgctcttgg cggatacgct
    63361 cttcctgaag ctgtttgagg gaattgctga catgaagcag cattccttcg ctttgtttga
    63421 gcagggcttt tttgttttcg acatcattgg tggcagcggc aacggcggct ttcaattcgt
    63481 cggaatcggt tttggcattt ttctcttccc tgtatttttt gtcctgtttc actgctttgc
    63541 cgttcttgtc ggaacggact tttttatttg cagaaacagt gtctttttcc gccttgccgc
    63601 ccttgcgcgg attgccctgt ccttttgcct cttttttgcc ttgtttgttt tcaggctgtg
    63661 tttttgcgtt tttttctttg gatccggaca cggacttgcc atgtgccttt ttgtgttccg
    63721 ccttcgattt cttatcccct tcgcgtcctt tgcgcgcaga ctgcctggat gtcgcctcct
    63781 tctctgcttc tttgcggttt ttggcggttt ttttggactc tttgccctct tttgccgcct
    63841 ctttgccgcc tgttttttta tctttcactg cgccattttt gcctttttct tttttgcctt
    63901 ccgccgcttc gggctgttct tttttgttct tcgtctgttt tttcacttcg gcggaacggt
    63961 tgtgtgccgc gtcgtgggcg gcaacggcgg gcgtggaaaa aacgagcatc agggcaagca
    64021 gaaggggttt gtagcgcatg gttcgacctt cggaaaaagt tggataatac tgaaggctgc
    64081 acgaaagcag ccggacgttt ggattatact gtcagttatg ccgtctgaaa atgccgtttg
    64141 cccaatcttg cgccttcttt gcgcggatac ttgcaatcgg ctcaaacagc cttatattgt
    64201 gcgtcatatt ttcaatgccg caacggatat tgtgttccga cacacagggt agcacattaa
    64261 gccgcatacc gtatgttgcc cgattttggg aacgtgcgcc cctccaaaca aagcaagccc
    64321 tgccgccttc acggaaaacg gggattcaac cgataaggaa attttgatga acagactgct
    64381 actgctgtct gccgccgtcc tgctgactgc ctgcggcagc ggcgaaaccg ataaaatcgg
    64441 acgggcaagt accgttttca acatactggg caaaaacgac cgtatcgaag tggaaggatt
    64501 cgacgatccc gacgttcaag gggttgcctg ttatatttcg tatgcaaaaa aaggcggctt
    64561 gaaggaaatg gtcaatttgg aagaggacgc gtccgacgca tcggtttcgt gcgttcagac
    64621 ggcatcttcg atttcttttg acgaaaccgc cgtgcgcaaa ccgaaagaag ttttcaaaca
    64681 cggtgcgagc ttcgcgttca agagccggca gattgtccgt tattacgacc ccaaacgcaa
    64741 aaccttcgcc tatttggtgt acagcgataa aatcatccaa ggctcgccga aaaattcctt
    64801 aagcgcggtt tcctgtttcg gcggcggcat accgcaaacc gatggggtgc aagccgatac
    64861 ttccggcaac ctgcttgccg gcgcctgcat gatttccaac ccgatagaaa atcccgacaa
    64921 acgctgatat gaacctctcc aaccactttc tcgtcgccat gcccgatatg gaagacgcgt
    64981 ttttttcaca atcggtcgtc tatatctgca aacacgatga agacggcgca ctcggcatcg
    65041 ccatcaacaa accctctccg attacgatgg acatgatttt ttccgccacc ggcaaaaaca
    65101 tccccatgcg gatgcagcac gacagcgtga tgatgggcgg gccggtgcaa gtcgagcgag
    65161 gttatgtcgt gcataccccg atcggcaact ggcaaagcag tatcggcgtt tcagacaata
    65221 tcgcgctaac ttcttcccga gacgtgattg aaaatatttc acgcgaaggt gcggttgaca
    65281 aagccttgat cagcataggc tattcaagct ggggaaaagg ccagctcgaa cgcgaacttg
    65341 ccgacaatgc gtggctgact gttcccgccg acgaacacat cctgttcgac atcccctacg
    65401 aacaccgtta cgccgccgca ttcgccaaac tcggcatcga cccgctcgcc ctgttttcgg
    65461 gagccggcca tgcataaaat tccaaaagga acggcactgg cattcgactt cggcgaagcg
    65521 cgtatcggcg tggcacaagg agacgcggaa ttagggctat cccatccttt gagcaccgtt
    65581 accggcggca gcaacgatga aaagttcgcg gcaatcgcca agctggttca agaatggcag
    65641 ccgcgttatt ttgtcgtcgg actgcccgtg cataccgacg gcacgaaaca tgaaatgacg
    65701 cacctgtcgc gcaagttcgg acgcaggctg aacggcaggt tcaatctccc cgtctattgg
    65761 gttgacgaac ggctgtcgtc cgtctatgcc gaaagcctgc tttcggaagc acaggtcttc
    65821 ggcaaaaaac gcaaatcggt gctcgaccaa gtggcggcgc aagccatctt gcacggtttt
    65881 ttcgagggcg gtccggcgga atgtttcaac gggcgtgagg gttaagcggc gcggttaaca
    65941 ccctaccgtg aaagaggcgc gcaccaagcc gtccagctcc aatgccaaat tgtcccccgc
    66001 accgattgcg cccacgccgg agggcgttcc ggtaaacacc aaatcccctt tccccaaacc
    66061 gtaatctgcc gccagtttgt gtaaaatttc ccgaatcggg taaatcatca aaccggtatc
    66121 cccgcgctgt ttcaatacgc cgttttgttt taatgaaaac aacacattct cgggattgcc
    66181 gattctgcct gccgccgcaa aatccgacac gcacgcggaa tgcctgaacc cttttgcctt
    66241 cagccagggc agcccttttt ccttcagacg gcattggata tcccgtgccg taaggtccag
    66301 ccctacacca tatcctgcga cacatcccaa aatatcttta ccctcgcccg tgccgtctga
    66361 atccttaccg accagcagca cgagttcgca ctcaaactgc acatccctac taaactcggg
    66421 cagcaagatt gtaccgccgc tgttcaaaat gctgcctgac ggcttcataa acaccacagg
    66481 ttcggaaggt atttcgtttt ttaactcttc aatatgtgcg gcatagttcc tgccgataca
    66541 gaaaatattg ccgacctcga ctgcttctcc ttctaaaaat actgaagcca cttcactttc
    66601 tccccaaata aaaatgccgt ctgaaattat tttcagacgg catttgacca agcttaccca
    66661 tttaataaag ctgttacacg cgcaacaatt tctccgattg caactgcctg cgcttcgttg
    66721 ttgcggcgtt cggcgtattc gacattgcct tctttcaaag cgcggtcgcc gatgacgatg
    66781 cggtgcggaa tacccaacag ctcggaatcg ttcagcaata cgcctgcgcg ttcgtcgcgg
    66841 tcatccagca gcacatccgc gcctgccgcc agcaattcgg catagatttt gtcggcggct
    66901 tcgcgtacgg tgtctgattt tttgtagttc atcggcacga taacgacttc aaacggcgcc
    66961 attgctttgg tccagatgat gcctttttcg tcgttattct gctcgatggc ggcggcaacg
    67021 acgcgggtga tgccgatgcc gtagcagccc atttccataa tttgcgattt gccgttgttg
    67081 tcaaggaagc ttacgttcat ggcttgggtg tatttgtcgc gcaactggaa gacgtgtccg
    67141 acttcaatgc cgcgcgcgag tttcagacgg ccttgcccgt cggggctttc gtcgccttcg
    67201 acgacgttgc gcaaatcgac aaactcaggc tcggcggcat cgcgcccgaa gttgaagctg
    67261 gtgtagtggt agccgtcttc gttcgcaccg atgacccagt ccgctccttt ttcagtagca
    67321 aaatcggcat aaactttacc tgcaaagctg accggaccca gcgagccgcc gtttgcgccg
    67381 aactgttcga caatcgcggc aggacttgcc atcgtcaatg gcgatctcac gcctgcgagt
    67441 ttttctgcct tgatgtcgtt gaactcatgg tcgccgcgca acagtaataa gacgatttcg
    67501 ccttcgtttt cgccttcgac cacgatggat ttgagggttt gttcaaccgg aatattcagg
    67561 aattcaacca aagactcaat ggttttgacg tttggtgtat gtactttggt caacacagcc
    67621 tgagcagcgg cgcgttcgcc tttaagcggc aaggtcggtg ccaactcgat attggcggcg
    67681 taatcggaag tgtcgctgta cgcaataaca tcttcgccgc tttccgccaa cacttgaaac
    67741 tcgtgcgaac ccgtaccgcc gatgctgccg gtgtctgcgg cgacggggcg gaattccaag
    67801 tccagacggg tgaagatacg gcagtaagcg tcatacatgg catcataggt cgtctgaagc
    67861 gaggcgtagt cggcatggaa ggaataagca tctttcatga caaactcgcg cgcacgcatc
    67921 acaccgaagc gcgggcgcac ttcgtcacgg aatttggttt ggatgtggta aaagtttttc
    67981 ggcagttgtt tgtagctgtt gatctcttta cgcacgatgt cggcgatgac ttcctcgcag
    68041 gtcgggccca tgcagaaatc gcggtcgtgg cggtctttca ggcgcagcaa ttctttaccg
    68101 taaaattccc agcggccgga ttcctgccac agctcggcag gctgcaccac cggcatcagc
    68161 aactccacgc tgcccgcgcg cgccatttcc tcgcgcacga cgttttcgac tttgcgtaac
    68221 acgcgcagcc ccatcggcat ccaagtataa aggccggacg cgttggcttt aatcagaccg
    68281 gcgcgaatca tcagcttgtg gctggcaagc gcggcttcgg caggggcttc ttttaaagta
    68341 gagataaaga attggctggc tttcataaaa gtatttttcc aaacaggcag attcaaaagt
    68401 aaatcgggtg cagattgtaa cgcgaaaaaa gcaggttttg caccaacctc caaaattcac
    68461 cccctgcccc aagcgcggga caaatcccat aacagacggc aaaaacatga ccagaaacat
    68521 catattgaac ataagcacat gatttttata gatttaaatg tgcctatttt ttaatcaaaa
    68581 taagcgtaca tttgttgcgt aagacttttt taacacaagc cgtggcttat caacacggtt
    68641 atccacaaag cttgtgtata gattttctac aataggaaaa ttgccgacag agacataatg
    68701 attcgatata ccacaattcc gaaaaaatat cgccaaaatc aaacagaata tttcgaaatc
    68761 aaaaagactt gaccttacca aacgccaact tcagtataaa acctgctttt acaggcatgg
    68821 ttatttgcca gcagacccga ttgctgatag gatttcgtgt ggagcagatc gaacattttt
    68881 ttcaagtttt cccttgtttc caaaactttt ataatttttt gaaaacatta aacttaaatt
    68941 attttttttc ggtttgattt agaaattttc gtttttgctt attatttttc acaaacgaaa
    69001 ataaaggggt tggctacacc ctccctgccg attaaacact caacataaag gatagatact
    69061 atgtccaccc aattacacga tgttgaccct atcgaaaccc aagagtggct ggacgcgtta
    69121 agctccgtcc tcgaatatga aggcggcgaa cgcgcgcaat acctcttgga aaacctggtc
    69181 aaatactgcc gcgacaaggg cgtacgtatg ccacacggca cgaccacccc gtatttgaat
    69241 accgtttcgg ttgaaaacga aaaaggcatt ccgggcgacc aaaacatcga acaccgcatc
    69301 cgcgcattcg tgcgctggaa cgccgccgcc atcgtattgc gcgccggcaa gaaagatttg
    69361 gaactgggtg ggcacatcgc atctttccaa tctgccgcca ccatgtacga agtcggtttc
    69421 aaccacttct ggaaagccaa aggcgaaggc gaagaaggcg atttggtctt cttccaaggt
    69481 cacgtcgctc cgggcatcta tgcacgcgca ttcgtcgagg gccgtctgac cgaagaccag
    69541 ctgaacaact tccgccaaga agtggacgga cacggtctgc cttcctatcc gcacccccac
    69601 ctcttgcccg acttttggca gttcccgacc gtatccatgg gcttggggcc catcatggcg
    69661 atttatcagg cgcgtttcct gaaatacttg gaatcgcgtg gtttggcaaa aaccaaaggc
    69721 cgtaaagtat ggtgtttctg cggcgacggc gaaatggacg aacccgaatc tcaaggtgca
    69781 atcgcactgg ctgcacgcga aggcttggac aacctgattt tcgtcatcaa ctgcaatctg
    69841 caacgcttgg acggtccggt acgcggcaac ggcaaaatca tccaagaatt ggaaggcaac
    69901 tttgccggcg ccggctggaa tgtcgtcaaa gtcatttggg gccgccgctg ggaccgcctc
    69961 ttggcgaaag acaaagacgg tatcctgcgc caacgtatgg aagaatgttt ggacggcgac
    70021 taccaaactt acaaatccaa agacggcgcg tatgtgcgcg aacacttctt caatacgccc
    70081 gaactgaaag cattggttgc cgatatgacc gatgagcaac tctgggcatt gaaccgcggc
    70141 ggccacgacc cgcaaaaagt gtacaacgcc tacgaccgcg cagcgaacca tgccgacggc
    70201 aaacctaccg tcatcttggc gaaaaccatt aaaggttacg gtatgggcgc atccggcgaa
    70261 ggtcagaacg ttgcccacca agccaaaaaa atggacaaag cgtccctgaa acaattccgc
    70321 gaccgctttg acattccggt taccgacgaa caaatcgaaa gcggcgatct gccttacctg
    70381 acttttgccc ccgatacgga agaatacaaa tacctgcacg cacgccgcga tgctttgggc
    70441 ggctacctgc cgcaacgcaa accgacgcag gaagtattgg aagtgcccga gctgtcagca
    70501 ttcgacgcac aactcaaatc cagcggtgaa cgcgagttct cgaccacgat ggcattcgtc
    70561 cgcatcctgt ccactttact gaaagacaaa aaaatcggca aacgcgtcgt acctatcgtt
    70621 cccgacgaaa gccgtacttt cggcatggaa ggtatgttcc gccaatacgg tatttggaat
    70681 ccgaaaggtc agcaatatac ccctcaagac aaagaccaac tgatgttcta taaagaatcc
    70741 gttgacggtc aaatcttgca agaaggtatt aacgaaccgg gcgcgatggc cgactggatt
    70801 gcggctgcaa ccagctacgc caacagcaac ttcgccatga ttccgttcta catttactat
    70861 tctatgttcg gtttccaacg tatcggcgac ttggcttggg cggcgggcga tatgcacgcg
    70921 cgcggcttcc tgctgggcgg tactgccggc cgtacgacgc tgaacggcga aggcctgcaa
    70981 cacgaagacg gccacagcca catccaggcc gacctgattc cgaactgcgt atcttatgac
    71041 ccgactttcc aatacgaagt cgccgtcatc gtacaagacg gtctgcgccg tatgtatgcc
    71101 aataatgaag acgtgttcta ctacatcacc ctgatgaacg agaactacac ccatccggat
    71161 atgcccgaag gtgcggaaca agacatcctg aaaggtatgt atctgctgaa agccggcggc
    71221 aaaggcgata agaaagttca attgatgggc tccggtacca tcctgcaaga agtcattgcc
    71281 ggtgccgagc tgctgaaagc cgacttcggc gtagaagcag acatctggtc ttgcccgtcc
    71341 ttcaacctgc tgcaccgcga cgctgtcgag gtagaacgct tcaaccgcct gcatccgctg
    71401 gaagccgaaa aagtaccttt cgttacttcc caactgcaag gtcatgacgg tccggtgatt
    71461 gccgctaccg actatatccg cagctatgct gaccgtatcc gcgcctacat cccgaacgac
    71521 taccacgtct tgggcactga cggtttcggc cgttccgaca gtcgcgccaa cctgcgccgc
    71581 ttctttgaag tggatcgcta caacgttgcc gtggccgcat tggccgcatt ggcggaacaa
    71641 ggcaaagtca gcaaagaaac cgttcaacaa gccattgaga aatacggcat caaagccgat
    71701 tcagctccta gctggaaacg ctgattgatg tttcagacgg cctgtttgcc ccattccgac
    71761 atcaggccgt ctgaaaaccg aatgcccgaa tggtttgagc agacaaaccg taccgatgcc
    71821 gcctgaagca gctttcagac ggcatccaat tgaacaagat taaaggaact caaatgagta
    71881 tcgtagaaat caaagtcccc gatatcggcg gtcacgaaaa cgtcgacatc atcgccgtag
    71941 aagttaaagc gggcgacacc atcgccgttg acgacaccct gattacactg gaaaccgaca
    72001 aagccacgat ggatgtgcct gccgatgcgg ccggtgtcgt gaaagaagta aaagtcaaag
    72061 tcggcgacaa aatctccgaa ggcggcgtaa ttttgaccgt tgaaaccggt gccgccgctg
    72121 ccgaagccgc tcctgctgcc gcaggcggtg caaccgttca agtagccgtt cccgatatcg
    72181 gcggccatac cgatgtggat gtaatcgccg ttgaaatcaa agtgggcgac accgttgccg
    72241 aagacgacac gctgattact ttggaaaccg ataaagcgac aatggacgta ccttgtaccg
    72301 ctgccggtgt cgttaaagcc gtattcttaa aagtcggcga caaagtgtcc gaaggctctg
    72361 ccattatcga agtagaaacc gtcggctctg ccgcagcagc ccctgctcaa gccgctcaag
    72421 ctgccgcacc ggctgccgct ccgcctccga ctgctgccgc cgcacccgcc gccgcgcctg
    72481 caccttctgc acctgccgct gccaaaatcg acgaggccgc tttcgccaaa gcacacgccg
    72541 gcccttccgc acgcaaactg gcgcgcgaat tgggcgtgga tttgggccaa gtcaaaggta
    72601 ccggcttgaa aggccgcatc gtgggcgacg acatcaaagc ctttgtgaaa tccgtaatgc
    72661 agggtggcgc ggcaaaacct gccgcagccg gcgcatcttt gggcagcggt ctggacttgc
    72721 tgccgtggcc taaagtggac ttctccaaat tcggtaatgt cgaagttaaa gaattgtccc
    72781 gcattaagaa aatctccggt caaaacctgt ctcgcaactg ggtggtgatt ccccacgtta
    72841 ccgtacacga agaagcagat atgaccgagc tggaagaatt ccgcaaacaa ctgaacaaag
    72901 aatgggaacg cgaaggcgtg aaactgtccc cgttggcgtt catcatcaaa gcctctgttt
    72961 ccgcgctgaa agccttcccc gaattcaacg cttctctgga tggcgacaac ttggtgctga
    73021 aaaactactt caacatcggt ttcgcagccg atacgccgaa cggcttggtt gttcccgtca
    73081 tcaaagacgt agatcaaaaa ggcttgaaac aaatcagcca agagctgacc gaattgtcta
    73141 aaaaagcccg cgaaggcaag ctcaaaccgc aagaaatgca aggcgcgtgc tttaccattt
    73201 ccagcttggg cggtatcggc ggcacaggct tcacgccgat tgtgaatgct cccgaagtcg
    73261 ccatcttggg cgtgtgcaaa tcccaaatca aaccggtttg gaacggcaaa gagtttgccc
    73321 cgcgcctgat gtgcccgttg agcctgtcct tcgaccaccg cgtcatcgac ggtgcggccg
    73381 gtatgcgctt caccgtattc ttggcgaagc tgttgaaaga cttccgccgc attaccttat
    73441 aaaataaaac atccctctca agcagtctga taatgtttgg attgcttgag attgatgagt
    73501 aatggtgtta aattcaacct ttaaattaat aacttatggg aaatttctta tatagaggca
    73561 ttagttgcca acaagatgag caaaataatg gacagttaaa acctaaaggt aataaagctg
    73621 aagttgcaat tcgttatgat ggtaagttta aatatgatgg taaagctaca catggtccaa
    73681 gtgtgaagaa tgcagtttac gcccatcaaa ttgaaacagg tctatatgac ggatgttata
    73741 tatctacgac aacagacaag gaaattgcca agaaatttgc aacaagttcc ggcatcgaaa
    73801 atggctatat atatgtttta aatagggatt tgtttggtca atattctatt tttgaatatg
    73861 aggttgaaca tccagaaaac ccaaatgaga aggaagtaac aatcagagct gaagattgtg
    73921 gctgtattcc tgaagaagtg attattgcta aagagttgat agaaattaac taagttgaaa
    73981 ggtcaatata atggctttag ttgaattgaa agtgcccgac attggcggac acgaaaatgt
    74041 agatattatc gcggttgaag taaacgtggg cgacactatt gctgtggacg ataccctgat
    74101 tactttggaa accgataaag cgacgatgga cgtacctgct gaagttgcag gcgtagtcaa
    74161 agaagttaaa gttaaagtcg gcgacaaaat ctctgaaggt ggtttgattg ttgtcgttga
    74221 agctgaaggc acggctgccg ctcctaaagc cgaagcggct gccgccccgg cgcaagaagc
    74281 ccctaaagct gctgctcctg ctccgcaagc cgcgcaattc ggcggttctg ccgatgccga
    74341 gtacgacgtg gtcgtattgg gcggcggtcc cggcggttac tccgctgcat ttgccgctgc
    74401 cgatgaaggc ttgaaagtcg ccatcgtcga acgttacaaa actttgggcg gcgtttgcct
    74461 gaacgtcggc tgtatccctt ccaaagccct gttgcacaat gccgccgtta tcgacgaagt
    74521 gcgccacttg gctgccaacg gtatcaaata ccccgagccg gaactcgaca tcgatatgct
    74581 tcgcgcctac aaagacggcg tggtttcccg cctcacgggc ggtttggcag gtatggcgaa
    74641 aagccgtaaa gtggacgtta tccaaggcga cgggcaattc ttagattcgc accacttgga
    74701 agtgtcgctg actgccggcg acgcgtacga acaggcagcc cctaccggcg agaaaaaaat
    74761 cgttgccttc aaaaactgta tcattgcagc aggcagccgc gttaccaaac tgcctttcat
    74821 tcctgaagat ccgcgcatca tcgattccag cggcgcattg gcactgaaag aagtaccggg
    74881 caaactgctg attatcggcg gcggtattat cggtctcgag atgggtacgg tttacagcac
    74941 gctgggttcg cgtttggatg tggttgaaat gatggacggc ctgatgcaag gcgcagaccg
    75001 cgacttggtg aaagtatggc aaaaacaaaa cgaataccgt tttgacaaca tcatgatcaa
    75061 caccaaaacc gttgcagtcg agccgaaaga agacggcgtt tacgttacct ttgaaggcgc
    75121 gaacgcgcct aaagagccgc aacgttacga tgccgtattg gttgccgccg gccgtgcgcc
    75181 caacggcaaa ctcatcagcg cggaaaaagc aggcgttgcc gttaccgatc gcggcttcat
    75241 cgaagtggac aaacaaatgc gtaccaatgt gccgcacatc tacgccatcg gcgacatcgt
    75301 cggtcagccg atgttggcgc acaaagccgt tcacgaaggc cacgttgccg ccgaaaactg
    75361 cgccggccac aaagcctact tcgacgcgcg cgtgattccg ggcgttgcct acacttcccc
    75421 cgaagtggcg tgggtgggcg aaaccgagtt gtccgccaaa gcctccggcc gcaaaatcac
    75481 caaagccaac ttcccgtggg cggcttccgg ccgtgcgatt gccaacggtt gcgacaacgg
    75541 ctttaccaag ctgattttcg atgccgaaac cggccgcatc atcggcggcg gcattgtcgg
    75601 tccgaacggt ggcgacatga tcggcgaagt ctgccttgcc atcgaaatgg gctgcgacgc
    75661 ggcagacatc ggcaaaacca tccacccgca cccgaccttg ggcgaatcca tcggtatggc
    75721 ggcggaagtg gcattgggta cttgtaccga cctgcctccg caaaagaaaa aataaatccg
    75781 actgaataaa cagccgataa ggtttatttg agaaaatgcc gtctgaaatg ttcagacggc
    75841 attttctatt ttacagcgga ttaaaatatc ttctccgacc tatagtggat taacaaaaat
    75901 caggacaagg cgacgaagcc gcagacagta caaatagtac ggaaccgact cacttggtgc
    75961 ttcagcacct tagagaatcg ttctctttga gctaaggcga ggcaacgccg tactggttta
    76021 aatttaatcc actataaaaa cgaatccgac acggcttatc taaaggaatg gttgaaaacg
    76081 gcagtttcca atacaacaaa atgccgcctg aacatttcag acggcatttg acccattact
    76141 gctgcggctc tgaaaccata ccgccttcat caaaatccgg ctccggttcg ttttgcaacg
    76201 ttttaccgtt caatttcaac tgattgtttt tcagagaaat ggcagtatca atctggtcgc
    76261 cgttcaaagt cagatatttt tcccttgcca tactctgaac cgtactgtcc accatcaggc
    76321 gcaaggtctc gttgatgtcg tcaagacttg ccctgccttc cgcctcatct tcggcattga
    76381 cgctgaaaat atttccagcc tgacttaccg ccaaatcttc caacattttt tgaggaatac
    76441 tcattctgat gtctgcctcg gttttcttca gcatcaaacc caattggttc aaatcttcct
    76501 tcttcaaatc tttaaacatg atttttccgc ccacatcgat ttttcctgac ggcagcgtga
    76561 aacgaaaagt tttaatgtcc aatacgggat tgttggtgaa cagtccagaa gcctcgcctt
    76621 tgacggcggc aatcaaatca ttgcggattt gttcctcagt catttttttg gcagaaattt
    76681 gtgcaaactt gcgtttcaat acggttaagg cagaagcatc gaggtgttcg gcagcgatat
    76741 gaatatccag cgggccgtat ttttcatcgc cgtaaaccag cgtgccaaaa cggaactgcc
    76801 cttcactgtc gataaacgcg cctgattccc cggtcttggt tgaaaaagcc agtttgccga
    76861 cttcgatttt ggaaggtgcg atgctgccgt tgggattaat aaacgcgcca atctgcaaat
    76921 cggtaacaag attgaccagt tcgtttaact tgacgttgta atcgacaccc tctttccatt
    76981 ctagggaaaa tttttccaaa gtcagattgc tgctgcccaa agcaagcggg ttgatgccgt
    77041 ctgaagtttc cgaatcgaaa tgcacttttt caaacgcggc atcgccttta tctgccagct
    77101 tgattttaaa caagggggca tcatagccgt tccggtagct tttgaaacct ttttgataaa
    77161 ccgtttcccc cgtcaggcct tcccagtgca gcctgatgcc cgacagttct tcataatcga
    77221 aggcgggaac actgacttcc attttaccgc tgccgttgaa ataaacggta ttggcaaggg
    77281 aaaccggagc ttgttttcca aaaaagcgtt ccagaacttt ttccgtttca ggcgcgtatt
    77341 tgaactcggt ttcaatgtgc gcctgcgtgc cgaatccacc ggcaaaaggg ccgtgcgtga
    77401 tatggtttac cagcgtaacc ggctgttcca acactgtttt caggttgtcc ggcaggtatt
    77461 tctgcgcatt atgcagcaat tcgggtttca gacggatgac cgtcgtttcc gtagaagtaa
    77521 accagccgcg gtcatattgg tgcgattcga cggtcaagaa gcccgtttcc tgcaatattt
    77581 tttgctgctg cgtcaggctt tcttcggctt tgacacccaa ataataaggt gtccccaaag
    77641 caacgccgag caatactgcc gcaaccgaaa tcaaaggttt tttcatcact tcaaacaagc
    77701 aggtttcaaa ggcactagaa tagcattatt taagcgtatc ccgccatatt tctttaaaag
    77761 aaatgccgtc tgaaacctgt tcggacggca ttttccggat gcggagaaat cagaaatcca
    77821 attccgcctt cagccagtaa gtgcgcggca taccgacgac ggcgaagctg cggtcaaatt
    77881 gtccgcgctg tacctgccag tagtttttgt tgaacaggtt ttctaccgag ctgctgacgg
    77941 tcaacgtatt tttgcccagc ttggttttgt ggcgcgcgcc tacatcaacc aaggtatagg
    78001 atgggaaggc gtattgtttt tgcgtgtctt ggtaagactt gccgaaatac gaaacattgc
    78061 tgtttaaagt caagcctttg gcaaacggtg tatcccattc caaacctgcc ttggcaatta
    78121 cgcgcggatt ggcgacttgt acgccgttaa ccagcatatc gcgtgaattt gggtagtctt
    78181 tcacggtcga ttgcagatac atcaggccca aagtcggacg cagggttttg tttaacaggt
    78241 tagcataggc attgaactcg ataccgcgat tgcgttccat accttgctcg tcgccggcta
    78301 cgccgccttg cgccttatag cgggcgaaat cggaattgtt gccataggtc agcgttgttg
    78361 ttaccccttt tgttgtcttg gtagttgtat gaccgcgcca gtagccgggc gtttgatttg
    78421 gaacgcgttt aacgtggtta cgaaattgcc ccagttttta cgcacgccca cttcaaactg
    78481 gcggctgaca cgcggtttcg ccattgtcat ttcgccggaa tcatcggttt tgatgtcggc
    78541 aggctccaag tcttccatat agttgccgta cacaaccaaa tcaggttgcg gcacccacgc
    78601 cgccatcagc atcgggctga aacgtttggc atcgccgctc tgtgattttt tgtcggtata
    78661 ttcgactgtt tggaaacgtc cgcccaaagt caggcggtat ttgttatcca cgaagcccaa
    78721 ggtgtcggac aaagccaggc tgttgacttt gatattggca tccaagttgg cagagttctc
    78781 ccaagaattg ggatagtcgg ctgtaaacga tgccaattga ttcgcaatat tttcgtttgc
    78841 cttcacttct atcttgctgt tgccgttccc gctgccgttt atggttttcc gctggcggat
    78901 aacgcggtcg aaagccatac tccagttatg tgttaccggg ccggtttcaa attcgccgcg
    78961 tgcggtcagg ttcatactca atgtgcggaa atattggtcg gtcaggcgcg cagtaccggt
    79021 attgtagtca tagttgcgtg ccgttacttt gccgctggcg tttgtgtttt gcatatcggt
    79081 acaagtgctg gtagcattca aacatacggt cggggaaatc agcgtgccgt aatagcgtgc
    79141 cttgttgtag ccgataccgc ctgtaatctg tgcattatca aacgcatccc attcaaacgt
    79201 aagcatattg gtttggccgg cggtattttg ccagttccaa gaaggcagca ggttggtttt
    79261 accatcgggc gcgccaaaca agcgtccgcc ggcgttttga atgtcctgca tacgcgcgcg
    79321 accgccgttg gttttgcgtt ttgcgtagat ggaatcgaac gctacgcgca gtgtttcgcc
    79381 gcgatagtcg gcatttaccg caaattcttt gttgtcttcg ctgtaaccgt ggcgcggggt
    79441 gtcgccgtgg cgcagtttgc cgttggcgcg cacgccgaat gctttgtttt cgccgaaacg
    79501 ttggcccaag tcgaacgtac cttgggcgcg gttgttactg aaccagccca aaccgatttt
    79561 gcggttgcct tcatcggcag cttttttggt ttcgatgttg acggaaccgg ataccgcgcc
    79621 ttcagggtcc atgccgttta cggcagtgga tgcgccttta atcagttgtg ccgatccaac
    79681 ttgcacgctg gccgtgcctt gcgtgccgta catacctgcc aaaccgttga cgctgaattg
    79741 gcgcgcatca agctgataac ctctgaaata cagtccggtc aacgtgttgc tttcgccgcc
    79801 gaactgccaa acggaagcat cttttttcgc tacggcatcc accaaagtac gcgcttcggt
    79861 gttattgagg gcttgttcgt cgtaattgac gacggtaatc ggtgcggtaa aggcgttggc
    79921 tttgcccatt cacttggtgc ttcagcacct tagagaatcg ttctctttga gctaaggcga
    79981 ggcaacaccg tactggtttt tgttaatcca ctataaacaa attgcacagg gttctccgtt
    80041 tagtttccat cctcggcagt ttggaacatt tagccgtttc caccttccca ctcttgttac
    80101 caataaaaat accgtctgaa atatcggcgc gatacttcag acggcatacc cgcccgtttt
    80161 cccgcattcc cgggagcggg ctgaaattta aacgtgtgcg gaaatgattt tcaacatttg
    80221 cgccagcact ttgggattgg cagccacaat atcgccgctt tccagccagc cgtcttcacc
    80281 cgtcatatcg gttacgatac cgcccgcttc ctgaacaatc aatgcgcctg cggcaatatc
    80341 ccaaggtttg aggttgaact cgaaaaagcc gtcaaaacga ccagtcgcca cagcacacaa
    80401 atccaaagaa gccgcgcctt cacgacggcc gccggcggtt tttgccaaga aatctttcaa
    80461 aatcgccaga tacttgtcca tcatgctttg atcgacaaca ggaaagccgg taccgatcag
    80521 gcagcggttc aattcgatgc ggttggaaac gcggatgcgg cggtcattga gcaacgcgcc
    80581 tttgccgcgc gaagccatgt aaacgtcgtt gcgttcgggg gcgtacacca aagcttcttg
    80641 caacacgcct ttgtgcagga gtgccataga gatggcgtat tggggatggc cgtgaaggaa
    80701 gttggtcgtg ccgtcgagcg gatcgataat ccattcgtat tcggctgcgg ctttaccgtg
    80761 ggagccgctt tcttcgcaag tgattttgtg gtgcggatag gcttctttca aagcctcaac
    80821 caggatgatt tcggaattgc ggtcaacatc ggaaacaaaa tcgttgaatg ctttgctgtc
    80881 ggttttgacg gcatcgagat tgcccgcggc gcgtatcatc atctgaccgg cacggcgggc
    80941 ggctttaaag gctgtattca aaaacggatt catcagattt ccttaagggt ggcataccgc
    81001 cggttcggac gcgcagtcct tcggagcggc aaaatcggag tttatttggt tggggtaaat
    81061 cctgccaaat cgggtaaaat accgcccgac gcgtgtctgc ttcaggcgca acgttaaatt
    81121 tccgacgttg ttaaagaaca tttcagacgg catttgaccg tccgaacgaa aaagacggcg
    81181 cattataccc tattccattc cgaccgaaaa ccgaacatga ctactctcaa acccgccctg
    81241 cccgcttatc tggacaacat ccgcatcatc ctcacgcgca ccagccatcc cgccaacatc
    81301 ggctctgccg cgcgcgcgat gaaaacaatg ggtctgcaca aactgaccat cgtcgcccca
    81361 aatctgatgg caacgccgat gacggaaaac ccgcccgtgt ttgacccgga gcatcctcaa
    81421 tcgtttaaat taccggaaga aagcttcatc ctcgcttccg gcgcggcaga cgttttggaa
    81481 aatgccacca ttgccgcttc tttggacgaa gcccttgccg acaccaccat cgcctgcgcc
    81541 ctgaccagcc gccgccgcga aattactgcg ccgctgcaaa ccccgcgcga tttggtatcc
    81601 gaattactgc agaccgcaaa ccgaggcgag aaagtggcac tggttttcgg caacgagact
    81661 ttcggcttga gcatcgaaga agtccaagcc tgcaaccgac tgatgaccat caacggcaat
    81721 cccgactatt tctcgctcaa cctcgcccaa gccgtgcagg tcgtgtgcta cgaaatcttc
    81781 agccaaaccg gttcgcccat gacccatctt caacaagaag accacgctgc gacccacgag
    81841 caaatcaaag gcatggtcgc ccacatggaa agcgtgatga acgacatcgg ctttttcaac
    81901 cgccgcaacg gcgagcgtct gatgcgccgt atgcagagcc tgttcggacg cgccaacacg
    81961 caaaccgaag acatcgatat cctgcgcggt tttttcaata ccgtcagcca tcgtatccat
    82021 aaaaaagact gattaaggcc gtctgaaaac atttccagct tttcagacgg catgactgat
    82081 attcggataa gcatgaatta cgccctagac gcattatggt ggaagctcac cagccaaccc
    82141 gtccgcgacc tcgcctcgct gctgactgcg ccgcctttgt ggcaaagcgg ttgcgaattg
    82201 ggcgtgcgcg aactattggg ggaacgcggt ttccgctatc ttttggcatt ggatgccgat
    82261 cccgcgccgc tgacggaaca cctcacccga cgcgccccgt tcggacaccg cctcggcatt
    82321 tacgccgaag aactgctggc attttggttt gccaacgcgc cacacgccga actgctcgcg
    82381 cacaacctca cggtttccgg ttcggacggc aatacgcaag gcgcggcgga ttttgtggta
    82441 aggcttaacg gcaagcccta ccatatcgag ctgacctgca aatattacgg cggcggcacg
    82501 ggcaggctcg aagacatgcg cggactcgac cccaaagaca cgctgttggg aaaagccgcc
    82561 aaactgaccg cccaactcgg tctgccgcac acttcagacg gcatccgaac cttgcggcaa
    82621 cacggtctgc cgcttgacgt aaaacccgtt tccatcgtgc gcggcatcgg attttttcca
    82681 cacggtttcc atgcttttga gccaccgctt aatccatacg gttggcgcgg catctatatt
    82741 caagattggg cggaatacgg gtttaaacgc caagaagtcc gctaccatct gctcgaccgt
    82801 atggcctacc tcgcgcctgc gcgtgtcgcc gaaaccgaaa cattgaacgc aaccgaaatc
    82861 cgccgtatcg accaaggctt gattgccgtt ttggaatgtc ggccggacgg cttttggcac
    82921 gaaatcgaac gcattatgaa ggccgtctga aaccctttcc caacattaac gcgtatatct
    82981 attgagaggc ttagtgatgg aaatctcatt tcccatacaa tttatgaaag agtcatccga
    83041 gttaataagg atattggata tgataaatat aacaacaaca tgccaactaa tattatgacg
    83101 atccaaacaa ataagtatgg taatttaata actacgaccc caggtagaat acaatgaaga
    83161 ataatgttaa aaattggaca actaaagaag tcaagcaatc attagataaa tttaataata
    83221 ttttaattaa aaatactttt cttcttcagt atctgaaaaa agagttttca gcttcaagtg
    83281 cttattgttt gtctatgctc cctgaagaag aagatatata tgaaatattg gttaatggga
    83341 atattattat tgatttagaa tttaataaac atacaaatga aacagttgtt attaatgtta
    83401 ctgatgttga tgaatacttg aaaactttaa ccaatgagag tggtagagta ttttttacat
    83461 tagcaaaaga aatcggcaaa cagaaaaaca tttaacaaga gcgaaataca aattaaaaac
    83521 tcaatggagt gatggcatat ttaggataga tatactgaac gaagaaaata aattttgttt
    83581 ttttcctcat gttttaggga gtgattacaa aatgaaatcg ctgatgtgat tatatcggat
    83641 gctgttcaag cgacctgaaa atagaacttt tttcaggctg cctttgtagt taacggagaa
    83701 atttagacaa atcccgattg cgcactttta acacatcttt cttattgcgg atagaatact
    83761 aagtaatgat aaagatgcta ttgttatttt aaggacgtta gattgattat gaataaccca
    83821 cagtaagaga acccattaca ttatgaacgc cgcacaactc gaccataccg ccaaagtttt
    83881 ggctgaaatg ctgactttca aacagccttc cgatgccgtc ctctccgcct atttccgcga
    83941 acacaaaaag ctcggccgcc aagaccgcca cgaaatcgcc gaaaccgcct ttgccgcgct
    84001 gcgccactat caaaaaatca gtaccgccct gcgccgtccg cacgcgcagc cgcgcaaagc
    84061 cgcactcgcc gcactggttc tcggcagaag caccaacatc agccaaatca aagacctgct
    84121 tgatgaagaa gaaatagagt ttctcggcaa tttgaaagcc cgtaaaaccg agttttcaga
    84181 cggcctgaat accgccgcag aattgccgca atggctggta gaacagctgc agcagcattg
    84241 gcgcgaagaa gaaatcctcg ccttcggccg cagcatcaac caagctgcgc cgctcgatat
    84301 acgcgtcaat accttgaaag gcaaacgcga taaagtgctg ccattgttgc aagccgaaag
    84361 tgccgatgca gaggcaacgc cttattcgcc ttggggcatc cgcctgaaaa acaaaatcgc
    84421 gcttaacaaa cacgagctgt ttttggacgg tacgctggaa gttcaagacg aaggcagcca
    84481 gctgcttgct ttattggtgg gcgcaaaacg cggcgaaatc attgtcgatt tctgtgccgg
    84541 tgccggcggc aaaaccttgg ctgtcggtgc gcaaatggcc aataaaggca gaatctacgc
    84601 cttcgacatc gccgaaaaac gccttgccaa cctcaaaccg cgtatgaccc gcgccggact
    84661 gaccaatatc caccccgaac gcatcagcag cgaacacgac agccgtatcg cccgactggc
    84721 aggcaaagcc gaccgtgtgt tggtggacgc gccctgctcc ggtttgggta ctttacgccg
    84781 caatcccgac ctcaaatacc gccaatctgc cgagaccgtg gccaaccttt tggaacagca
    84841 acacagcatc ctcgatgctg cctccaaact ggtaaaaccg caaggccgct tggtttacgc
    84901 cacttgcagc atcctgcccg aagaaaacga gctgcaagtc gaacgtttcc tgtccgaaca
    84961 tcccgaattt gaacccgtca actgcgccga actgctgcaa aacctgaaga ttgatttgga
    85021 taccggaaaa tacctgcgcc tcgattcggc aaagcaccaa accgacggct tcttcgccgc
    85081 cgtattgcaa cgcaaataaa ccggt
//
LOCUS       DAWGBY010000002        61186 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.002, whole genome shotgun sequence.
ACCESSION   DAWGBY010000002 DAWGBY010000000
VERSION     DAWGBY010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 61186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 61186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..61186
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.002"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(243..617)
                     /locus_tag="WHG62_000079"
                     /pseudo
     CDS             complement(243..617)
                     /locus_tag="WHG62_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981114.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(923..2182)
                     /gene="rho"
                     /locus_tag="WHG62_000080"
     CDS             complement(923..2182)
                     /gene="rho"
                     /locus_tag="WHG62_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ1724269.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            complement(2402..4786)
                     /gene="ppsA"
                     /locus_tag="WHG62_000081"
     CDS             complement(2402..4786)
                     /gene="ppsA"
                     /locus_tag="WHG62_000081"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ1724270.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPMLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFAINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            5197..6018
                     /locus_tag="WHG62_000082"
     CDS             5197..6018
                     /locus_tag="WHG62_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ1724271.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(6257..6919)
                     /locus_tag="WHG62_000083"
     CDS             complement(6257..6919)
                     /locus_tag="WHG62_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ1724272.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLLKLGTGITPDHPDYARWRTEYLEEYDRRYAQDTELFDGVNELIAELNQRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSVKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QS"
     gene            complement(6957..7784)
                     /locus_tag="WHG62_000084"
     CDS             complement(6957..7784)
                     /locus_tag="WHG62_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ1724273.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPITLFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKHAV"
     gene            8062..8685
                     /gene="lolA"
                     /locus_tag="WHG62_000085"
     CDS             8062..8685
                     /gene="lolA"
                     /locus_tag="WHG62_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ1724274.1"
                     /translation="MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            8958..10097
                     /locus_tag="WHG62_000086"
     CDS             8958..10097
                     /locus_tag="WHG62_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1724275.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQAPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARDLM
                     EAKYTNDPSIFPTKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            10229..11282
                     /locus_tag="WHG62_000087"
                     /pseudo
     CDS             10229..11282
                     /locus_tag="WHG62_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            11323..11853
                     /locus_tag="WHG62_000088"
     CDS             11323..11853
                     /locus_tag="WHG62_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ1724276.1"
                     /translation="MNAIRTFQNRTPEIHETCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLAGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAVHYVKLSKQYGM"
     gene            complement(11887..12003)
                     /locus_tag="WHG62_000089"
     CDS             complement(11887..12003)
                     /locus_tag="WHG62_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HEZ1724277.1"
                     /translation="MPSKPEKRASDGIFACNSNADDQNQGASDTVIGCVPSA"
     gene            complement(12022..12209)
                     /locus_tag="WHG62_000090"
                     /pseudo
     CDS             complement(12022..12209)
                     /locus_tag="WHG62_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575226.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor"
     gene            complement(12228..13823)
                     /locus_tag="WHG62_000091"
     CDS             complement(12228..13823)
                     /locus_tag="WHG62_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ1724278.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVEPDEAKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLTFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(13930..14325)
                     /gene="hisI"
                     /locus_tag="WHG62_000092"
     CDS             complement(13930..14325)
                     /gene="hisI"
                     /locus_tag="WHG62_000092"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ1724279.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGSAWETADAVLKDEKEIYGSTH"
     gene            complement(14356..15123)
                     /gene="hisF"
                     /locus_tag="WHG62_000093"
     CDS             complement(14356..15123)
                     /gene="hisF"
                     /locus_tag="WHG62_000093"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ1724280.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPGNTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(15136..15873)
                     /gene="hisA"
                     /locus_tag="WHG62_000094"
     CDS             complement(15136..15873)
                     /gene="hisA"
                     /locus_tag="WHG62_000094"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ1724281.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(15906..16544)
                     /gene="hisH"
                     /locus_tag="WHG62_000095"
     CDS             complement(15906..16544)
                     /gene="hisH"
                     /locus_tag="WHG62_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ1724282.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCMAALTRDGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGCRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(16675..18177)
                     /gene="pta"
                     /locus_tag="WHG62_000096"
     CDS             complement(16675..18177)
                     /gene="pta"
                     /locus_tag="WHG62_000096"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ1724283.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(18362..19420)
                     /gene="fbpC"
                     /locus_tag="WHG62_000097"
     CDS             complement(18362..19420)
                     /gene="fbpC"
                     /locus_tag="WHG62_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ1724284.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKT
                     TLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIA
                     YGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGSALFFPGNTL"
     gene            complement(19441..20958)
                     /gene="fbpB"
                     /locus_tag="WHG62_000098"
     CDS             complement(19441..20958)
                     /gene="fbpB"
                     /locus_tag="WHG62_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ1724285.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLTAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LILGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTADDVHTLSTAVWEYTSDAQYAAAAPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(21026..22021)
                     /gene="fbpA"
                     /locus_tag="WHG62_000099"
     CDS             complement(21026..22021)
                     /gene="fbpA"
                     /locus_tag="WHG62_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ1724286.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYVPT
                     SGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLAGKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(22412..22753)
                     /locus_tag="WHG62_000100"
     CDS             complement(22412..22753)
                     /locus_tag="WHG62_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HEZ1724287.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RAEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAVHSAMLIHRAADALGKEIRHLQS
                     EGKNLKEMWDI"
     gene            complement(22811..24187)
                     /gene="argH"
                     /locus_tag="WHG62_000101"
     CDS             complement(22811..24187)
                     /gene="argH"
                     /locus_tag="WHG62_000101"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ1724288.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIRSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIRREITAKLLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(24206..25075)
                     /gene="galU"
                     /locus_tag="WHG62_000102"
     CDS             complement(24206..25075)
                     /gene="galU"
                     /locus_tag="WHG62_000102"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ1724289.1"
                     /translation="MKPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(25103..25702)
                     /gene="rdgB"
                     /locus_tag="WHG62_000103"
     CDS             complement(25103..25702)
                     /gene="rdgB"
                     /locus_tag="WHG62_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ1724290.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFEPYGITVLPQSEFSIPECP
                     EPYSTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALAELLRKLAL"
     gene            complement(25695..25928)
                     /locus_tag="WHG62_000104"
     CDS             complement(25695..25928)
                     /locus_tag="WHG62_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724291.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(26036..26569)
                     /locus_tag="WHG62_000105"
     CDS             complement(26036..26569)
                     /locus_tag="WHG62_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ1724292.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(26671..27129)
                     /gene="nudB"
                     /locus_tag="WHG62_000106"
     CDS             complement(26671..27129)
                     /gene="nudB"
                     /locus_tag="WHG62_000106"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ1724293.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            27340..27416
                     /locus_tag="WHG62_000107"
     tRNA            27340..27416
                     /locus_tag="WHG62_000107"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:27374..27376,aa:Pro,seq:ggg)
     gene            27574..29400
                     /gene="mafB"
                     /locus_tag="WHG62_000108"
     CDS             27574..29400
                     /gene="mafB"
                     /locus_tag="WHG62_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HEZ1724294.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGKIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFMAAIPIKGIGAVRGKYGLGGI
                     TAHPIKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNINSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            29403..29867
                     /locus_tag="WHG62_000109"
     CDS             29403..29867
                     /locus_tag="WHG62_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724295.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            30056..30238
                     /locus_tag="WHG62_000110"
                     /pseudo
     CDS             30056..30238
                     /locus_tag="WHG62_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223961.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
     gene            30250..30537
                     /locus_tag="WHG62_000111"
     CDS             30250..30537
                     /locus_tag="WHG62_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HEZ1724296.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            31033..32289
                     /locus_tag="WHG62_000112"
     CDS             31033..32289
                     /locus_tag="WHG62_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ1724297.1"
                     /translation="MKSKSGVIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEA
                     LKKDKQTARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKE
                     SLYYLNKHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGS
                     CAETFGLGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEY
                     VQFSIDLFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQS
                     SQFKAHAQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGV
                     YQATVEIKKPDGSWEMKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNK
                     WQGTSKSGIKIEGFTEPNRTAYPIYE"
     gene            32320..32739
                     /locus_tag="WHG62_000113"
     CDS             32320..32739
                     /locus_tag="WHG62_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724298.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            32817..32900
                     /locus_tag="WHG62_000114"
                     /pseudo
     CDS             32817..32900
                     /locus_tag="WHG62_000114"
                     /inference="COORDINATES: protein motif:HMM:NF026862.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            32897..33139
                     /locus_tag="WHG62_000115"
     CDS             32897..33139
                     /locus_tag="WHG62_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
                     /protein_id="HEZ1724299.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            33217..33462
                     /locus_tag="WHG62_000116"
     CDS             33217..33462
                     /locus_tag="WHG62_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ1724300.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            33465..33855
                     /locus_tag="WHG62_000117"
                     /pseudo
     CDS             33465..33855
                     /locus_tag="WHG62_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            33882..34073
                     /locus_tag="WHG62_000118"
     CDS             33882..34073
                     /locus_tag="WHG62_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ1724301.1"
                     /translation="MRLSDGIFDTKQVTKRVFDGKGEAKIPSYTWHHHQDTGRMQLIS
                     ERKHTQTGHIGGEAMDKGK"
     gene            34076..34474
                     /locus_tag="WHG62_000119"
     CDS             34076..34474
                     /locus_tag="WHG62_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724302.1"
                     /translation="MLGLTRNNCDDLGFAILCYERNAADKKEFLDWLYGIVRTVPAES
                     FPRYLIDLIDCLESDDCSINIYNIIGFVPTTGMTKKEKDAVYGITYIRNQEFYDIPIT
                     REKALKALKKHPEIYQKFRHFFPFVELPPL"
     gene            34575..34964
                     /locus_tag="WHG62_000120"
     CDS             34575..34964
                     /locus_tag="WHG62_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724303.1"
                     /translation="MWKIIKEDSNDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDVGIGDIGNIVGFAPSSSLPKSKKNALTGIAFLRGIDVYDPPVSKEK
                     ALKALKKHPEIYQKFQHFFPFVELPPL"
     gene            35112..35501
                     /locus_tag="WHG62_000121"
     CDS             35112..35501
                     /locus_tag="WHG62_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724304.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
     gene            complement(35542..36999)
                     /locus_tag="WHG62_000122"
     CDS             complement(35542..36999)
                     /locus_tag="WHG62_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ1724305.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(37014..37844)
                     /locus_tag="WHG62_000123"
     CDS             complement(37014..37844)
                     /locus_tag="WHG62_000123"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ1724306.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLKGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            complement(37922..38311)
                     /locus_tag="WHG62_000124"
     CDS             complement(37922..38311)
                     /locus_tag="WHG62_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ1724307.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAIAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            complement(38447..38971)
                     /gene="nspA"
                     /locus_tag="WHG62_000125"
     CDS             complement(38447..38971)
                     /gene="nspA"
                     /locus_tag="WHG62_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ1724308.1"
                     /translation="MKKALATLIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            complement(39142..39336)
                     /locus_tag="WHG62_000126"
     CDS             complement(39142..39336)
                     /locus_tag="WHG62_000126"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724309.1"
                     /translation="MENAAASPAGRFRRHSRRQKCPTLKAQSHTKPYACTCNNPTDTA
                     VFSKPFASFTHPPRDAAATI"
     gene            complement(39511..40686)
                     /locus_tag="WHG62_000127"
     CDS             complement(39511..40686)
                     /locus_tag="WHG62_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ1724310.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALEGAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQCFL"
     gene            complement(40743..43268)
                     /gene="ligA"
                     /locus_tag="WHG62_000128"
     CDS             complement(40743..43268)
                     /gene="ligA"
                     /locus_tag="WHG62_000128"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ1724311.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALERNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYGHMQQKRPELPYEIDGMVVKVNSLAQQHELGFI
                     SRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAEA
                     PAANQTQSVPLYKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYCLDIPTLQKMKETADKTVAESDQMPSEG
                     SSVGASGKHKKQPTKWAENILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPILACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPA
                     AQYAEPQRWIARLPDFKISENKAQALWELAGKSIEGLQTDKALPTDWQAWRNEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGILPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            complement(43416..44702)
                     /locus_tag="WHG62_000129"
     CDS             complement(43416..44702)
                     /locus_tag="WHG62_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ1724312.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKLQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPVPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(44896..45468)
                     /gene="ampD"
                     /locus_tag="WHG62_000130"
     CDS             complement(44896..45468)
                     /gene="ampD"
                     /locus_tag="WHG62_000130"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ1724313.1"
                     /translation="MDNPATAPWQDGWLQSVRHIPSPNFGPRESKEEVSLVVLHNISL
                     PPFEYGTDAVERLFANRLDPNDHPFFGLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            45552..46547
                     /gene="mltG"
                     /locus_tag="WHG62_000131"
     CDS             45552..46547
                     /gene="mltG"
                     /locus_tag="WHG62_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ1724314.1"
                     /translation="MLRKLLKWTAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIGHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEVDAGSSDLQIYQTAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            46607..47227
                     /locus_tag="WHG62_000132"
     CDS             46607..47227
                     /locus_tag="WHG62_000132"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ1724315.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQTREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAVIDSNRNLDEVRNSIEKVLDGHFGC"
     gene            47449..48729
                     /locus_tag="WHG62_000133"
     CDS             47449..48729
                     /locus_tag="WHG62_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ1724316.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKQFYAIEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADFEAYAAKLGEWKL"
     gene            48965..49236
                     /locus_tag="WHG62_000134"
                     /pseudo
     CDS             48965..49236
                     /locus_tag="WHG62_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            49276..50325
                     /locus_tag="WHG62_000135"
     CDS             49276..50325
                     /locus_tag="WHG62_000135"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ1724317.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEGAEGRLKARFG"
     gene            50515..51096
                     /locus_tag="WHG62_000136"
     CDS             50515..51096
                     /locus_tag="WHG62_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ1724318.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            51165..51347
                     /locus_tag="WHG62_000137"
     CDS             51165..51347
                     /locus_tag="WHG62_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ1724319.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALSEEELKV"
     gene            51344..52105
                     /gene="kdsB"
                     /locus_tag="WHG62_000138"
     CDS             51344..52105
                     /gene="kdsB"
                     /locus_tag="WHG62_000138"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ1724320.1"
                     /translation="MTEFVILIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDVMRAEKRELPSETAVLRHIGIYAYRAGFLQRYAEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            52128..52445
                     /locus_tag="WHG62_000139"
                     /pseudo
     CDS             52128..52445
                     /locus_tag="WHG62_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            52550..52747
                     /locus_tag="WHG62_000140"
     CDS             52550..52747
                     /locus_tag="WHG62_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724321.1"
                     /translation="MAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDVAL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            52904..52996
                     /locus_tag="WHG62_000141"
     tRNA            52904..52996
                     /locus_tag="WHG62_000141"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:52938..52940,aa:Ser,seq:gct)
     gene            53423..54208
                     /locus_tag="WHG62_000142"
     CDS             53423..54208
                     /locus_tag="WHG62_000142"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ1724322.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAKAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            54245..55117
                     /locus_tag="WHG62_000143"
     CDS             54245..55117
                     /locus_tag="WHG62_000143"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ1724323.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(55177..55777)
                     /locus_tag="WHG62_000144"
                     /pseudo
     CDS             complement(55177..55777)
                     /locus_tag="WHG62_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic protein cnp1"
     gene            55886..56110
                     /locus_tag="WHG62_000145"
     CDS             55886..56110
                     /locus_tag="WHG62_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ1724324.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            56111..56257
                     /locus_tag="WHG62_000146"
     CDS             56111..56257
                     /locus_tag="WHG62_000146"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724325.1"
                     /translation="MPSEMRMSRPTALFLNIVCAACRFKNKPSGVQCRHFGRIAADLF
                     RNGC"
     gene            56473..57507
                     /gene="pyrC"
                     /locus_tag="WHG62_000147"
     CDS             56473..57507
                     /gene="pyrC"
                     /locus_tag="WHG62_000147"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ1724326.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAVLPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQDILFLVHGEVTDPEIDIFDREAAFIERVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENAGTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(57874..58299)
                     /gene="nusB"
                     /locus_tag="WHG62_000148"
     CDS             complement(57874..58299)
                     /gene="nusB"
                     /locus_tag="WHG62_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ1724327.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAAEYIQQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(58377..58853)
                     /locus_tag="WHG62_000149"
     CDS             complement(58377..58853)
                     /locus_tag="WHG62_000149"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ1724328.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            complement(58900..59223)
                     /locus_tag="WHG62_000150"
     CDS             complement(58900..59223)
                     /locus_tag="WHG62_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ1724329.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAVLLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            59390..60109
                     /gene="rnc"
                     /locus_tag="WHG62_000151"
     CDS             59390..60109
                     /gene="rnc"
                     /locus_tag="WHG62_000151"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ1724330.1"
                     /translation="MKDDVLKQQAHAAIQKKLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRRADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGYANDSMFVISCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKRKKK"
     gene            60157..61080
                     /gene="era"
                     /locus_tag="WHG62_000152"
     CDS             60157..61080
                     /gene="era"
                     /locus_tag="WHG62_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ1724331.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDAV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELIKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
BASE COUNT        14191 a        14396 c        17612 g        14987 t
ORIGIN      
        1 caggtgtttg cactcatggg cattggcgga ggtatagtgg attaacaaaa atcaggacaa
       61 ggcgacgaag ccgcagacag tacaaatagt acggaaccca ttcacttggt gcttcagcac
      121 cttagagaat cgttctcttt gagctaaggc gaggcaccgc cgtactggtt tttgttaatc
      181 cactataaaa atttatgggg ctgtcctaga taactaggat aaactcgatt ttactaattg
      241 ttttaaaatg gaacaagaac ttttatctca ctgttgttaa aacgtcgttc gtaccccttt
      301 aaatacagct caaaatgcgc tttgggaatg ccgtcaaact tgcgtaaatg acgttttgcc
      361 cggtttcaaa agttcccaat tccattgata tggttttgtc gttcagcaaa ataactttca
      421 tctgcttcta ctttgccgtc aaacatttcc aaatgcggac tgttttgata aataagtaat
      481 cgtaaacgat gaaaataata ggctgcggta tttttattaa cgcctactaa ctctgctgct
      541 gttcttgcag ttacacctgc gacaaacagt tcaatgagtt tattttgttt atactggctt
      601 agacgacttt ttctcatagg ggcaactcta acttaatttg aatttcccta gttatctagg
      661 acagccccaa atttatacaa aaatgagcgc ggttcggcgc aaccttgaat caagttcccg
      721 catcggtttt cattgccggt acggatgcgt tcaagccggt tttgcaaagg ccgcgctttc
      781 ggcaagcgga cacggacact gccgacggtt gcgccgttaa cggggggagg gaggagctgc
      841 gccggccgtg tgaatgaaag tgccgtctga aacccgattt tcaggcttca gacggcattt
      901 cgcattaatg cgggcggcgc gtttatttgc cgcgcatcag ttcaaagaaa tcgtcgttgt
      961 ttttagaggc tttgattttc ccgtttaaga actcggtagc ttcgatttca tccatcgggt
     1021 gcaggaactt gcgtaagagc cacatacgtt gcaactggtc gttcggcaca agcagctctt
     1081 cgcggcgcgt gccggatttg ttgatgttga tggcggggaa gaggcgtttt tccgccatac
     1141 ggcggtcgag gtgcaattcc atattgccgg tgcctttgaa ttcttcgtaa atcacatcgt
     1201 ccatacggct gccggtttca accaatgctg tggcaatgat ggtcagcgaa ccgccttctt
     1261 ccacgttgcg cgccgcgccg aagaaacgtt tggggcggtg cagtgcgttg gcatcgacac
     1321 cgccggttag gattttgccc gaggtaggca cgacggtatt gtaggcgcgg gcaaggcggg
     1381 taatcgaatc cagcaggatg accacgtctt ttttgtgttc taccatacgc ttggcttttt
     1441 caagcaccat ttcggcaact tggacgtggc gttgcgccgg ttcgtcaaag gtggaggaaa
     1501 ccacttcgcc gcggacggaa cggctcattt cggttacttc ttcgggacgc tcgtcaatca
     1561 agaggacgat gagttcgact tcgggatagt ttgcggtaac ggcgtgggca atgttttgca
     1621 gcatcacggt tttaccgctt ttgggcgggg caaccaagag ggcgcgctga cctttgccga
     1681 taggggaaat caggtcgatg gcacgtccgg tcaggttttc ttcggacttt aagtcgcgtt
     1741 ccagcttcaa ctgttcggtc ggaaacagcg gggtcaggtt ttcaaacagg attttatggc
     1801 ggcatacttc cgggtggtcg ccgttgatgg tatcaagcct gaccagggca aaatagcgtt
     1861 cgttgtcttt tgggacgcgc acgcttcctt cgatggtgtc gcccgtatgc aggttgaagc
     1921 ggcggatttg ggtgggcgag acatagatgt cgtcggggcc ggcaagatag gacgtgtccg
     1981 cgctgcggag gaagccgaag ccgtcgggca ggatttcaag cgtgccggag caggtgaaac
     2041 cctcgccttt tttcatcatc tggcggacga tggcaaatac gaggtcttgt ttgcggaatc
     2101 ggttggcgtt ttcgatgccg tgttcttccg ccaattctaa gagtttggaa atgtgcaggg
     2161 tttgtaattc ggagacgtgc ataataatga tgtattttga agaggaaaaa gacaggcaga
     2221 tgccgtctga aagaagaagc tgaccgttgc cggttgctcg gggaaggggg aattgtaggc
     2281 agtcggcgcg tgggtgtcaa atattatcgc ggacggggca tcggcaggaa atgccgtctg
     2341 agcggagctg cttggaaaaa aatacccccg cgcttttcag gctcgggggt atgggcattg
     2401 attatttgtt caattcattc gccaaataca gccaagtttc gatgacggta tccgggttca
     2461 gagaaacgct ttcaatgcct tcctcaacca gccatttggc gaagtccgga tggtcggacg
     2521 ggccttgacc gcagatgccg acatatttgt tctgcttgcg gcaggcggag atggcaaggt
     2581 gcagcatcac tttgacggca gggttgcgtt cgtcaaacga ttcggatacc aagccgctgt
     2641 cgcggtcgag accgagggtc agttgggtca tgtcgttcga gccgatggag aagccgtcga
     2701 agtattgcag gaattgttcc gccaataccg cgttgctcgg cagctcgcac atcataatca
     2761 ggcgcaggcc gtttttgccg cgttccaagc cgttttcttt cagggctttg acaacggctt
     2821 cggcttcgcc caaagtgcgg acgaacggaa tcatgatttc aacgttggtc aaccccattt
     2881 catcgcggac gcgtttcaag gctttgcatt ccaaggcgaa acagtctttg aagttgtcgg
     2941 cgacataacg cgccgcacca cggaagccca acatcgggtt ttcttcatgc ggttcgtata
     3001 cgctgccgcc gaccaggttg gcgtattcgt tggatttgaa gtcggacata cggacgatgg
     3061 ttttacgcgg ataaaccgat gcggccaatg tcgccacgcc ttcggcgatt ttatcgacgt
     3121 agaagtcgac aggggacgcg taaccggcga tacggcgggt aatttccgct tttaattcgt
     3181 catcttgttt gtcaaattcc aacaaggctt tcgggtggat accgatttgg cggttgatga
     3241 taaattccat acgcgccaag ccgatgcctt cgctgggcag gttggcgaag ctgaatgcga
     3301 gttcggggtt gccgacgttc atcatgactt tgacgggtgc tttgggcata ttgtccaagg
     3361 cgacatcggt aatttgtacg tccaacagac cggcatagat gaagccggta tcgccttcag
     3421 cacaggatac ggtaacttct tgaccgtttt tcagcaattc ggttgcattg ccgcagccga
     3481 caacggcagg aatgcccagt tcgcgcgcga taatcgccgc gtggcaggtg cgtccgccac
     3541 ggttggtaac gatggcggaa gcccgtttca tcacgggttc ccaatccgga tcggtcatgt
     3601 cggtaaccag tacgtcgccg gcttcgacgg aatccatctc ggaagcatct ttaatcaggc
     3661 gtactttgcc ctgtccgact ttctgaccga tggcacggcc ttcgcataat acggtttttt
     3721 cgccgttgat ggcgaagcgg cgcaggttgc ggctgccttc ttcctgggat ttgacggttt
     3781 cgggacgggc ttgcaggatg tagagtttgc cgtccaagcc gtcgcgtccc cattcgatgt
     3841 ccatcgggcg gccgtagtgt ttttcgatgg tcagtgcgta atgcgccaac tcagtgattt
     3901 cttcgtcggt aatggagaag cggttgcggt cttcctcggg gacatcgacg ttggttacgg
     3961 atttaccggc ttctgctttg tcggtaaaaa tcattttgat gtgtttcgaa cccatggtct
     4021 tgcgcaggat ggcgggcttg cccgctttga gcataggttt gaacacataa aattcgtccg
     4081 ggttgaccgc accttgtacg acgttttcgc ccagaccgta agaggaggta acaaagacga
     4141 cttgatcgta gccggattcg gtgtcgaggg taaacatcac acctgatgcg ccgctgtcgg
     4201 aacgcaccat gcgttgaacg ccggcggaaa gggcgacgat gtcgtgttcg aagcctttgt
     4261 ggacgcggta ggaaatggcg cggtcgttgt acagggaggc gaatacatgg tgcatcgctt
     4321 ctttaacgtt ttccaatccg ttgatgttca agaaggtttc ctgttggccg gcaaatgatg
     4381 cgtcgggcag gtcttcggcg gttgcggaag agcgtacggc aacggaaatg tccgcaccgc
     4441 cggcatcggc aaccattttg ttccatgccg cttcgatttc ggcatcgagc tgttcgggga
     4501 agggcgtgtc caaaatccat tggcggattt ctttgccgac gcgtgccagt tcggcaacgt
     4561 cttcgacatc taattttgcc agtgcggcgg aaatgcgttc gctcagaccg ttgtgtgcga
     4621 ggaatgcgcg gtaggcatcg gctgtggtgg caaagccgcc ggggacgcga acgccttttt
     4681 cggtcagctg actgatcatt tcgcccagcg aggcgttttt accgcccacg cgttcaacat
     4741 ctgtcatacg caggttttca aaccagatta cgtagttgtc ggccatttgt gtgtccaatc
     4801 caaaatatgt taaaaaagaa acaaatccgc gtgcttattt taagcgattc gttcctctgc
     4861 tgtcatgtgt tttatccgtt ttaaaatcat gatgccgtct gaaaaattgc ggtttcggcg
     4921 tgtgtagcgg tttgaaactt gcagccggta tacttctttt tttgggtatt ttctttgtaa
     4981 aacaggtggt ttgaataggt taatgttttt tctgtttgat ttttttgttt attttttaaa
     5041 attttctgcc aaaaaatact ttatataaat aattttattt caaaattata ttgtgtctgt
     5101 ttgggtgtaa tctgaggtag gcgtgctgcg ggtgctttcc ttgtgtctgc cgctgctgtt
     5161 atgatgatat ttttattctg tatttaagga tggaagatga gcagtccgcg ccatgtgttt
     5221 tacatttccg accgtaccgg tctgactgcc gagaatatcg gcgaggcttt gctgaaccag
     5281 tttggcaatc tgtcgttcaa acgccatacg catccgtttg tcgatacgcc ggaaaaggcg
     5341 cgcgcggtgg tggagaaggt caatcggagc cggcaggaaa acggtcagcg tccgattgcg
     5401 tttgtcagtg tggttgatga cgaaatccgt cggattatca aaggggcgga tgcttttcag
     5461 attaatttct ttgagacttt tttgggactg ttggagaaag aactcaatac cgaagccacg
     5521 gcatccgagc aggggcatca cagtatcggt aatacgaagc gttacgatgc gcgtatggag
     5581 gcggtgaatt tctcattgaa ccacgatgac ggggtcagcg ataagaacct tcaggaagcg
     5641 gatgtaatct tgatgggtgt atcgcgttcg ggcaaaacgc cgacctgcct ttacctcgcc
     5701 ctgcaatacg gcatccgtgc ggcaaactat ccgctgattc ccgacgattt ggaatcggcc
     5761 gatctgccgc gtatggtcaa gccttatagg gataagctgt tcgggttgac catccagccg
     5821 gaacgtttgc aggccatccg ccaagagcgc cgcccgaatt caacttatgc caaaatcgat
     5881 acatgccgca gcgaggtggc agacgcgcag agtatgttca gacggcatgg cattccgttt
     5941 gcgaatacga cggataaatc agtggaagag cttgccgtac acatccttca ggcgtgcaag
     6001 ctcaaacgca ggttttgacg ggctttgatt cggtttgaag gcggaaatgc cgtctgaaat
     6061 caggtttcag acggcagttt tatagtggat taacaaaaat caggacaagg cgacgaagcc
     6121 gcagacagta caaatagtac ggagccgatt cacttggtgc ttcagcacct tagagaatcg
     6181 ttctctttga gctaaggcga ggcaacgccg tactggtttt tgttaatcca ctatatgttt
     6241 gtggggcgga tatttttcag gactgtattt tgtccagaca ttcgagcaga tcgagcggcg
     6301 tgcggatgtg gaaatccgcc tgccatgagc cggtatcgtc ttcgggagcg atgtagcccc
     6361 attcggcgag gacggttttc atgccggcgt tgcggcctgc ttggatgtcg cgttcggcat
     6421 caccgacgta gagtgtgtgt tgcgggtcgg cgtggatttg tccgcacgca tacagcatgg
     6481 gtttgacgct gggcttgggt tcgccgcagg tgtcgccgct gacgacgacg gcgggtggga
     6541 tgatgaagcc gagtttgggg acgagtttgt cggtgaagcg catgggtttg ttggtgatga
     6601 tgccccattt gatgccgcgt tggttgagtt cggcaatgag ttcgttcacg ccgtcaaaga
     6661 gctcggtgtc ttgggcgtag cggcggtcgt attcctccag atattcggtg cgccatcggg
     6721 catagtcggg gtggtcgggg gtgatgcctg tgccgagctt gagcagtcct gccgcgccgt
     6781 ggctggcttg ggtgcggatc tcgtccatgc tttttgcagg tagtccgtgg cgagcgagca
     6841 gggtgttgag tgcgcctccg aggtcgaggg cggtgtcggc aagtgtgccg tcgaggtcga
     6901 agagtacggc gtgtatcatg tgtgttcctt ttttataaag tgcgggacga agggtttcag
     6961 acggcatgtt tattttgttt caaaccctgt tcgaaatctt ccagcatatc caattcaaag
     7021 cggctgaagc ccgctttttc gcgcgcttcg atgttcacat agccgcggaa gataaacata
     7081 tcgtaacggg caatcagact gcggaacagg gtaatcggtt ccaaaccgcg ttcgcggcag
     7141 aggtgttgat accaatggtt gccgatggcg acatgaccca cttcgtcgcg gtaaatgatg
     7201 tccaatacgc cgcaggtttc cgaatcgccg cgctgcgcca ccttcgcgcg tatccccggc
     7261 gtaacgtcca gcccgcgcgc ttccaacacg cgcggtacca acgccatacg caacagcggg
     7321 tcgtaggcgg ttttgtacgc catatcccac aaatggttgt gcgcctcgaa actgccgtaa
     7381 tcgaagccga aagcgcgcaa tctgtcgcgc atcaggcgga aatggtacac ctcttccttc
     7441 gccactttca cccagtcgcg gacaaactga aacggcagcg tgcggaaacg gtatgccgcg
     7501 tccaaagcca gattgacggc gttgaattcg atatgcgcaa tcgcgtgcag catcgccgca
     7561 tagccttctg ccgtgttcat tttgcgtggc gtcagttgcg acggcgcgac caaaacaggc
     7621 ttgtccggcc gtcccgcgcg ggggaaatct gccggtggcg cgtttgcttc cgccccgtcc
     7681 gcattttgaa cggcggcaaa cgcctcatcc gtcagccgtc ctttttcatc tgggtcgccc
     7741 gaaagcaggg cgcgttccag caaagcataa atatcgagtt tcatctcaag tccgccgtgt
     7801 tcggaaaaca aatattatag cgttttaaaa aaacaagatg aggcatataa tctccgcgat
     7861 tcggcattcc gcgcccaaac cgtcaaatca cgcggcacac aattaaaggg cagcgtggcg
     7921 cgcctacctt ttccgagcgg tcaaaaaaat cagccctcgg aaaacgctgt ttgtaaaatg
     7981 caaaccgccc gtaacgccgc ccgtatgatt gttttgccgc gccgatactt tacgccacac
     8041 ccatcccaac aaggaaaaat aatgatgaaa ccgcacaacc tgttccaatt tctcgccgtt
     8101 tgctccctga ccgtcgccgt cgcttccgca caggcgggcg cggtagacgc gctcaagcaa
     8161 ttcaacaacg atgccgacgg tatcagcggc agcttcaccc aaaccgtcca aagcaaaaag
     8221 aaaacccaaa ccgcgcacgg cacgttcaaa atcctgcgcc cgggcctctt caaatgggaa
     8281 tacacttcgc cctacaaaca gactattgtc ggcgacggtc aaaccgtttg gctctacgat
     8341 gtcgatttgg cacaagtgac caagtcgtcc caagaccagg ccataggcgg cagccccgcc
     8401 gccatcctgt cgaacaaaac cgccctcgaa agcagctaca cgctgaaaga ggacggttcg
     8461 tccaacggca tcgattatgt gctggcaacg cccaaacgca acaacgccgg ctaccaatac
     8521 atccgcatcg gcttcaaagg cggcaacctc gccgccatgc agcttaaaga cagcttcggc
     8581 aaccaaacct ccatcagttt cggcggtttg aataccaatc cccaactctc gcgcggcgcg
     8641 ttcaagttta ccccgcccaa aggcgtggac gtgttgagca actgatgccg tccgccccga
     8701 tgccgtctga aagccgccga ggcttcagac ggcattttca cgcaggcgga acaatgtccc
     8761 gcattaccgc ccgatcgggc atcggaacgg caaacccgtg aaaattaacg gttgcgcccc
     8821 ggttgttttt gccgtttaat gcaaaccttg ctgcatcaag ggccaagaaa gccgaccggc
     8881 cgcccccaca gcttccgatg caggcggcca ggccgtccct gcaatgtttt ttatttttga
     8941 acgaaaggtc gaaaaccatg aaaaaaacac tggtggcggc ggcaatcctg agcctcgcct
     9001 tgactgcgtg cggcggcgga agcgataccg ccgcccaagc cccctccgcc aagcctgaag
     9061 ccgaacaatc gggcaaactc aatatctaca actggtcgga ttatgtcgat cccgaaaccg
     9121 tcgccgcctt tgaaaaagaa accggcatca agacgcgttc cgattattac gacagcaacg
     9181 aaacactgga ggcaaaagtc ctgaccggca aatccggcta cgacctgact gcgccgtcca
     9241 tcgccaacgt cggccggcaa atcaaagcgg gcgcgtatca gaaaatcgac aaggcgcaaa
     9301 ttccccatta cggcaacatc gataaagatt tgttgaaaat gatggaagcc gtcgatccgg
     9361 gcaacgaata cgccgtcccc tatttctggg gcatcaacac cttggcaatc aacacgcggc
     9421 aggtgcaaaa ggcattgggt acagacaagc tgcccgaaaa cgagtgggat ttggtgttca
     9481 accccgaata cactgccaaa ctcaaatcct gcggcatcag ctatttcgac agcgcaatcg
     9541 aacagattcc tttggcgttg cactatttgg gcaaagaccc caacagtgag aatcccgaag
     9601 acatcaaagc cgccgtcgat atgatgaaag ccgtccgggg cgacgtgaaa cgcttcagct
     9661 cttccggcta tatcgacgat atggcggcgg gcaacttgtg tgccgccatc ggttacggcg
     9721 gcgatttgaa cattgccaaa acccgtgccg aagaagccgc aaacggtgtg gaaatcaaag
     9781 tattgacccc gaaaaccggc gtgggcgtgt gggtggattc ctttatgatt ccgcgcgacg
     9841 cgcaaaacgt tgccaacgcc caccgctata tcgactacac gctccgaccc gaggtggcgg
     9901 cgaaaaacgg cagcttcgtt acctacgcgc ccgccagccg tcccgcgcgt gatttgatgg
     9961 aagctaaata cacaaacgat ccatcgattt tcccgaccaa agaactgatg gaaaaaagtt
    10021 tcatcgtatc gcccaaatcc gcagaatccg ccaaactggg cgtgaagctg tggcaaggtc
    10081 tcaaagcggg caaataaccg gaacccctgc cgtctgaaac ctttcgggcg gcaggaaacg
    10141 gcgcgtccgt tatcaaacag ggggcgtttc cccgcctgcc ggttatgatt gggttaagat
    10201 taaaattatt tagtaaaatg agaaagatat ggatttaagt atcgtagttc ccatttataa
    10261 tgtcgagagt tatttggaag cgtgtctaaa ttccatagaa cctatattaa gcaatgaaaa
    10321 tgtcgaactt atccttgtga atgacgggtc aaaagacgga agtgaagata tatgttacaa
    10381 atatatagat aaaatatcaa acaacaaaca acaaacaaca aacaacaaac aacaaacaac
    10441 aaacaacaaa caacaaacaa caaacaacaa acaacaaaca ccggacacca aatatcaaat
    10501 atatatatca ggataaccaa gggttgtcgg aggcgagaaa tactggcata aaaaattcaa
    10561 acggaaaata tatagtcttt attgattcgg atgattttat taattgtcag gtcttgctgg
    10621 attttcttag taaagatgat attgatatgc cggatgtggt ttttttaaat gcggttaaat
    10681 atgataaggg aagtgtttca tattttggcg aagattatca gcctgaaaaa atactcaatc
    10741 aatctaaagt cgaagttttg aaaggattat gccgatttag aaaatttccg ggttcggcgt
    10801 ggaataagat tataaaaaga gaattgatta ttagagaaaa actgtttttt gaaagggaaa
    10861 tttattctga agatatcgaa tggtcaatga ggttatttaa tgcggcaaca actttttctt
    10921 atttggacgg ttgttattac tattatcggc agggaagaaa agattctatt acgggaactg
    10981 tttcggaaaa aagtataaag tcattattat atattttgga gaaaaatgcg gaaatggaat
    11041 ttgataggga tatatcaagt tatctttatt cctttctttc ctacgaatat ctcgttttgc
    11101 tttttatcat gacgagtaaa aatatagagt gtgatgctga tataaaaaga agggcgtatc
    11161 atttaagatt tatgctgtta aagtccaata agttgatata taagatgata ttcccgataa
    11221 tcacattact cggggtcgat attacaggca ggattttaaa agcaatcagg gggaatattt
    11281 aataaatcct ttaacaatat acatcttacc gaaggaggaa aaatgaacgc aatccgaact
    11341 ttccaaaacc gcacgcccga aatccacgaa acctgtatga tagacgaagc gtgcgtcgtc
    11401 atcggcgaag tgtcgcttgc cgaagatgtt tccgtgtggc cgtgcgccgt gttgcgcggc
    11461 gatgtgaaca gcatcaccgt cggcgcgcgc agcaatatac aggacggcag cgtcctgcac
    11521 gtttcccaca aaaccgccgc caaacccgaa gggtcgccgc tggttatcgg cgaagacgtt
    11581 accgtggggc acaaagtgat gctgcacggc tgccgtatcg gcaaccgcgt cctggtcggc
    11641 atggggacga cggttctgga cgatgccgtg attgaggacg aagtgatgat cggcgcgggc
    11701 agcctcgtgc ctccgcgcaa acgtttggcg ggcggctacc tttatgtcgg ttcgccggtc
    11761 agacaagtgc gcgtgctgac cgatgaggaa aaagcctttt tgaaatattc cgccgtgcat
    11821 tatgtgaagc tgtcgaaaca gtacgggatg tgaaatcaca tcggcgttct tgcgtcagcc
    11881 ccaaattcat gcggatggga cgcatccgat aacggtatcc gatgcgcctt gattttgatc
    11941 gtctgcgttt gagttgcagg caaaaatgcc gtctgaagcc cttttttcgg gtttagacgg
    12001 cattttattg ccgattgctt tttagagttt gaccgaatgt tcgcgcgttt cgtggaacac
    12061 gatgtctggc caacgttctt gcgtcagccc taaattcatg cggacgggat gcccgataac
    12121 ggtatccgat gcgccttgat tttgatcggt gcatttgagt tgcaggcaaa aatgccgtct
    12181 gaagcccttt tttcgggttc agacggcatt ttattgccga ttgcttttta aagtttgacc
    12241 gaatgctcgc gcgtttcgtg gaacacgatg tccggccagc gttcttgcgt gagtcccaga
    12301 ttcacgcggt taggggcgag gtaggcgagg ttgccgcccg cgtcgatggc gaggttgcct
    12361 gcattggctt tttcaaattc cgccagtttt ttcttgtcgt cgcacgatac ccagcgcgcc
    12421 gaccagatgg atgcgctgtc gaacacggct tctacgccgt attcgttggc cagccgcgag
    12481 gtaacgactt caaattgcaa cacgccgacc gcgcccaaaa tcaaatccgc gccgctcatc
    12541 ggtttgaaca cctgcaccgc accttcttcg ccaagctgtt gcaaaccttt ttgcagttgc
    12601 ttgattttca gcgggttttt gatgcgaacg ctgcggaaca gttcgggcgc gaagaatggg
    12661 atgccggtaa acgtcagttg ttcgccttcg gagaagctgt cgccgatttg gatgttgccg
    12721 tggtttggga taccgataat gtcgccggcg taggcttctt caaccagctc gcggtcgtgg
    12781 gacatgaagg ttaccacgct ggaggcggcg atttcgcggt tgatacgcag gtgtttcatt
    12841 ttcatgccgc gctcgaattt accggagcag acgcgcaaaa aagcgatgcg gtcgcggtgt
    12901 ttcggatcca tattggcttg gattttaaag ataaatccgg aaaacttagc ctcgtccggc
    12961 tcgaccatgc gtacggtcgc gtcgcgcggt ttcggtgcgg gtgcccagtc aatcaatgaa
    13021 ttgaggattt cctgaatacc gaagttgtta atcgcagagc cgaagaacac gggcgtgagt
    13081 tcgccggcga gaaattcgtc gagattgaac tcgttcgatg ctgcctgcac caattcgatt
    13141 tcgtcgcgca actgttggat ttccaatgga aagcgttgtt ccaattcggg attgtctatg
    13201 cctttgatga tgtcgaactc gtgcggcagg cgttcgccgc ccgcttcaaa gagatagatt
    13261 tcgtcgttca ggatgtggta cacgcctttg aagtttttgc ccataccgat tggccaggtg
    13321 acgggcgcgc agcggatttg caggatgttt tccacttcgt ccagcaattc cagagaatcg
    13381 cgtacttctc ggtcgtattt gttcatgaac gtaacaatcg gcgtatcgcg caggcggcag
    13441 acgtttaaga gcttgatggt ttgcgcttcc acgccttttg ccgcgtcgat gaccatcaac
    13501 gcgctgtcca cggcggtcaa aacgcggtag gtgtcttctg agaaatcttg gtgtcccggc
    13561 gtgtccaaga ggttgacggt gtggtcttta tagtcgaact gcatcacgct tgatgccacg
    13621 gaaatgccgc gctgcttctc gatgtccatc cagtcggaag tggcgaattt gccggttttt
    13681 ttgcctttta ccgtacccgc gctttgaatc gcacctgaaa acagcaagag tttttcagtc
    13741 aacgtggttt tacctgcgtc agggtgggag atgatggcaa acgtgcggcg gcggcgcact
    13801 tggtcgagga tttcttggga catggttttc tttgcaaaaa ggttcaggcc gcttttcaga
    13861 cggcccggac agtgtttgag acggcgaaat tgtacaaaaa aatgcctgat aattcaatgt
    13921 tggaggcggt cagtgcgtgc tgccgtaaat ctctttttcg tctttcagga cggcatcggc
    13981 ggtttcccac gcgctgccac gccagacttt gtaaaagcag ctttctcgcc cggtgtggca
    14041 ggcgatgccg ccgttttggg cgatgagcat cacaatggcg tcgccgtcgc agtcgaggcg
    14101 cagttcgcgg actttttgcg tgtgtcccga ctcttcgccc ttcatccatt gtttttggcg
    14161 cgaacggctg taatagtggg caaagccggt ttcgacggtt ttttgcaggg cttcggcgtt
    14221 catccacgcc accattaaaa cacgtttggt ttcggcatct tgggcgatgg cgcaaaccaa
    14281 acctttttcg tcaaatttga cggcttcaag caggttttta tccatatttt ctttcagacg
    14341 gcatggtcgg ggcggtcaga ggcgcacttc gatgccggct tcgcgcatag cgcgtttggc
    14401 ttcgcggatg gcgatttccc cgaaatggaa aacgccggcg gcaagtacgg catcggcttt
    14461 gccttcggtt atgccttcaa tcaggtgccg gacattgccg accccgccgg aggcgatgac
    14521 ggggatgtcg acggcttcgg caacggcgcg ggtcagcggc aggttgaaac cctgtttcgt
    14581 accgtccctg tccataccgg taagcaggat ttcgcccgcg ccgcgttttt gcatttcgat
    14641 cgcccattcc accgcatcca aaccggtcgg attgcgcccg ccgtgggtaa agatttccca
    14701 gcgtgtgttt ccggggttga cggctttggc atcgacggcg gcgacgatgg cttgcgaacc
    14761 gaaaaatccg gcggcttcgt caatcaggtc gggacgggta acggcggcgg tgttgatgct
    14821 aactttgtcc gcgccggcat tgagcaggcg gcggatgtcg gcaacggtgc gtacgccgcc
    14881 gccgacggtc agggggatga agacttgtcc ggcaacttct tcgatgatgt gcaggatggt
    14941 gtcgcggttg tcggatgagg cggtgatgtc gaggaaggtc aattcgtccg cgccttcgcc
    15001 gttgtagcgt ttggcggctt cgacggggtc gcccgcgtcg cgcaaaccga tgaagttcac
    15061 gcctttgacg acgcgcccgt cttttacgtc gagacagggg atgatgcgtt ttgccagtgc
    15121 cataatcgga tgcctttagt cgagggaatc tgccagttgc tgcgcttggg caaaatcgat
    15181 gctgccctcg taaatcgcgc ggccggtaat cgcgcctgct acgccatgtt tttcggcggc
    15241 acacagggcg cggatgtcgt ccaagccggt cagtccgccg gaggcgatga cgggaatgcg
    15301 gacggcttgg gcgagtttga ccgtcgcgtc gatgttcacg ccgctcatca taccgtcgcg
    15361 cccgatgtcg gtgtagatga tgctgttgac accgtcgtct tcaaagcgtt ttgccaaatc
    15421 aattacatga tgcccggtta cggttgccca gccgtcgatg gcggccatac cgtctttggc
    15481 atccagcccg acaataatcc tgccggggaa ggctttgcac gcctcgcgca cgaagtcggg
    15541 gtttttgacc gccgccgtgc cgataatcac gtcgttcaga cccaaatcca aatattgtcc
    15601 gatggttttc aaatcgcgta tgccgccgcc gagctgtacg gggatgtctt tggcgacggc
    15661 ggcaaggatg tctttgatgg cgggcaggtt ttgcggaacg ccggcaaacg cgccgttcaa
    15721 atctaccaga tgcaggcggc gcgcgccttg tttgaaccag tgcagtgcgg tttcggcggg
    15781 cgaatcggaa aagacggtcg cctcttccat cagcccttgt ctcaggcgga cgcagcgtcc
    15841 ttctttcaaa tcgatggcgg gtatcagcag cataattttt ctccttgtgc ggggccgtgt
    15901 ccggcttacc agtttaaaaa gtttttcaac atcgtcagcc cggcatcgtg gcttttttcg
    15961 gtgtgaaatt gcgtggcgaa tacgttgtct ttgccgacga tgcaggcaaa cggggacggg
    16021 tagtcgcttt cgcccaatat ggtttcggga ttttcggggg cgaaatagta gctgtggacg
    16081 aagtaaaaac gcgtgtcttg gggaatatct ttaaacagcg ggtggttttg ggtttggcgc
    16141 acggtgttcc agcccatatg cgggactttc agacggcatc cctgcgggtc gcggaggtcg
    16201 cgctcaaagc gtctgacttt gccgccgaac cagcccaagc cgtcggtgtt tccttcttcg
    16261 ctgtggtcga ataaaagttg cgcgccgacg cagattccga aaaagggttt gttttttaag
    16321 gcatctttga ctgcctcgtc caagccgtcg cgcgtcagtg ccgccataca gtcgggcatc
    16381 gcgccctgac cgggaaaaat gactttgtcg gcgcgggaca cgcgttcggg gtcgccgctt
    16441 aaaaagattt cggtattttt tccggcaagc tgccccgccg tccggacgga tttcaatacg
    16501 gaatgcaggt tgcccatacc gtaatcgata atggcgattt gcatggcttc ctcctctttt
    16561 tttgcaatat ggctgcgatt ttaacaaaca aatgtgccgt gctgataaaa atgccgtctg
    16621 aaaacgggag tctgtcttca gacggcatag ggttcaaacc cggaaagccg tttgtcagcc
    16681 ttccatttgt tttgcctgaa cggcagtcag ggctatggtg aacacgatgt cttccaccag
    16741 cgcgccgcgc gacaggtcgt tgaccggttt gcgcaggcct tgcagcagcg ggccgacgct
    16801 taagacgttg gcactgcgtt ggacggcttt ataggtgcag ttgccggtgt tcaggtcggg
    16861 gaagaccaaa acggttgcct gtcctgccac cgggctgccc ggggctttgg atttgcccac
    16921 gcccggcacg gttgccgcat catattgcag cgggccgtcg atggcgaggt ctgggcgttt
    16981 ttcccgggca agtttggttg cttcgatgac ggtatcgaca tcggggccgc tgccggagtt
    17041 gacggtggag taggaaatca tcgccacttt cgggtcgatg ccgaaggctt ttgcggaatc
    17101 ggcagactgg atggcgatgt cggcaagctg ttgcgcggtc gggttcggat taaccgcgca
    17161 gtcgccgaag acgaggactt ggttgggcag cagcataaag aatacgctgg acacgaggct
    17221 tgcgcccggt gcggttttaa tcagttgcaa agcggggcgg atggtgttgg cggtggtgtg
    17281 aaccgcaccg gataccaaac cgtccacatc attttgcgcc atcatcatcg taccgagtac
    17341 cacggtgtct tgcagttgct tgcgcgcgtc ttcgggtgtc aggcctttgg atttgcgcag
    17401 ttcgcacatc ggtccgacgt attgttcgac caatgaggcg ggatcgatga tttccaaaga
    17461 gtcgggcagg ctgataccgc gttctttggc aacggcttcg acttcttcgc gtttggcaag
    17521 caggacgcag cgggcaatgc ctttttcgtg gcagatggcg gcggcttgga cggtgcgggg
    17581 ttctgcgcct tcaggcagga cgatgcgttt gtcggcttgg cgggcgaagt cgatcaggtt
    17641 gtagcggaat tgcgccggcg acaggcgttt tgcttcgcgg cctgccaata cggatacgtc
    17701 tttcagcgcg tcgctcgaac cgaagaaggt caggccggtt ttttcggctg ccgcttcggc
    17761 aacggaggct gccgcgccgt ccacgacaaa accttccaat acgcccggcg cggcggcgaa
    17821 gaactgtttg gcaaggttca gccgatttgc cagttcgtcg gcatcggcgt tgtcggaacg
    17881 gacggcgaag acggctgccg cgtcaaggga caatgccagt tcgacgtttt tgcctgcgag
    17941 gtagattttg tcggcatcgg gcgcgatgcc ttcgatgacg aggttggcgg catcgagtgc
    18001 ggcaactttg ccgaccagtg cgtcgaacca gtcgtcgctt ttgccttgcg cgagcagggt
    18061 ttcggcggtt gcgtcaacgg cttggaaaat ttgtgcgtcc agtgcttttg caaaggcttg
    18121 tgcggcggcg gaggcgtcca gtccggcaga tacgggtacg atgagtactt ttgccatgat
    18181 atatcctttc gtatgctgcg gtgtgcggca tatgtggttg gaaggggcgg catataggca
    18241 gaaacggctg cctgcgtgcc gtgcgtgccg tgtttggctt gaggcgcgca ggttgaatat
    18301 agcaaacaaa ttctgttttc aacaagataa atatccgcag gcttgtggat gctgccgcct
    18361 ttcagagggt atttccgggg aagaacaggg cggaaccgtc caaatggagg acggcggaaa
    18421 tgccgtctga cagggtgggg gcggaaggga ggttgagcgt gaggacggtt tgtccgaccc
    18481 ggaggctgat ttcggtatgc cgcgctttgg gcgtggtttt gagaaccacg gcgtgaatgg
    18541 aggcggtggg tgcggaatgg gggtgaaggc tgaactgttc cggacggatg agcagtgtgc
    18601 cgcgtgtgcc tgcgggtgcg ccgctttgaa cgggcaggcg gcccaatccg caatcggcgg
    18661 tgccgtcggc gttgagcgcg gcggggaaca cgatgccttc gccgataaac agggcggcat
    18721 caaggtcggc aggttgtcgg tacaattcgt gagggcttgc agtttggagg atgcgcccct
    18781 gtttcatcac ggcaatccgg tcggcgtatt gcagggcttc ttcgcggtcg tggctgacga
    18841 aaacggcaga tttgccgttg gcgcgcaggg cggcaatcat gtcttcgcga atctggcggc
    18901 gcaactgttc gtccagcgcg ctgaagggtt cgtccaacaa aatcagttcg ggatcggggg
    18961 cgagggcgcg ggcgagggcg acgcgctgtt gttgtccgcc cgaaagttcg tgcggatagc
    19021 gtccggcaag ttcggaaatg ccggtcaatt ccaacatggc ttcgatgcgc tgtcgctctt
    19081 gcgccgtcct gcctttgccg ttgccgagac cgtaggcgat attgcggtaa acggtcaggt
    19141 gggggaacag cacgccttcc tgtacgaggt aacccaaacg gcgttcgcgg acgggaaggt
    19201 tggtattttt cgagaagatg gttttgccgg aaagcgaaat ttcgccggaa tcgggttgtt
    19261 cgaaaccggc aaggcagcgt aaaagggtgg ttttgccgca gccggacgcg ccgatgataa
    19321 agagaatttc gcccgggtcg aggctgagcg aaatgtcgtt taaaaccggg gtgttttgaa
    19381 aacttttgga caggtgtccg atgtgcaggg cggcggtcat agcggtgctt cctcaagctg
    19441 ttatttgaag gcgtatttct tcagcaggaa tacgggtatg ccggaaaata ataccagcat
    19501 cagcgcgtaa ggggcggcgg cggcgtattg tgcgtccgat gtgtattccc aaacggcggt
    19561 ggagagcgtg tggacatcgt cggcggtcag cagcagggtg gcggtcaact ctttcatcag
    19621 cttgaggaag acgagtgcga atgcggcggt aatgccgggc aggatggacg gcagtaccaa
    19681 cgtcctgaaa ataaagaagt gtccgcgccc caatgttgcg ccgacctgtt ccatcccttt
    19741 ggggagttgt tccaaggaag tcctcagggt ggtttgcgcc atcggcaggt aaagcatgaa
    19801 ataggcaagg atgacgacga taaaggtttg gtaaacggca ggggtgtagt tgatgctgaa
    19861 ataaaccaag gatagggcga taaccaaacc ggggacggcg tgcagtaaaa acggcagcct
    19921 gtctatccaa acggttaaaa aattgcgata gcgaaccgat gcccaaacaa ggggcaaggc
    19981 acataatata gtcaaaatcg cacctaaagc cgatacgctt aaggaacgga taaaggcatc
    20041 aaatacggat acgagcgcga atgtgccgga agtgccgacc atcatccaat gtatcaatac
    20101 gccaaagggg ataataatgc ccaaaatcaa caagctgctt aaaaaaacaa tcgcgccgat
    20161 ctgaccgggc agtttgaggg ttttgacggg ataaggacgg gcaacgcctt tgccgctgtg
    20221 gtaaatcttg gctttgccgc gaaatatgct ttctccaaat acgacgatgc cgcacaccgc
    20281 cgtcaaaaca gcggaaagca gggcggcggt attgttgttg taggacattt cgtattcttg
    20341 gaaaatggca gtggtaaaag tggggtagtt caaaatggat accgcgccaa attcgaccag
    20401 catatgcagg gcgatcagta acacgctgct gccgatggcg ggtttgagct gcgggaggat
    20461 ggcggaaaaa aaggtttgca ggcggctttt gcccaaggac aggctgactt cttcgtaaga
    20521 caggctgatg cgtttgagtg ccgcctcgac gggcaggtag gcgagcggaa acgaggacag
    20581 gctcataatc atcactgtcc cccaaaagcc ttcgacgcgg aaggtcaggc tgatccaggt
    20641 gaaacagctg acaaatgcgg ggatgcacaa aggcagggtg attgccgtct gaaaaaaggt
    20701 tttgccgaag aagcggtaac gttggaacaa aagggcgcag gcaatgccca aaacaatgga
    20761 aatcagggta acgcccgcca tcatcgtcaa ggtgttggag agcaaatccc acatacgcgg
    20821 gcggaacaac agttcgacgg cgcggttgat gccgacctgc cacgaacgca tagcgacata
    20881 taaaaaaggc agggtaagcg gcagggcgat cagtaggatg aggccggtaa gccaaatggg
    20941 tattttttta ggagacatag tgtttttcat cggcaaaacg ggcggacagt ataaatgtcc
    21001 gcccgtttga caatccgaaa acggcttatt tcataccggc ttgctcaagc agccgggtgg
    21061 cgtgttcttt ttcggaaaca gtggtggcgg acacttgggg tgcttccaac ttggcgatgg
    21121 gttccaaatt gaaggtggat accacgtgcg gattcaaagg atattcggca cggacggcgg
    21181 tcagggcgcg ctgtccttcc ttgccggcga ggaaggcgac gaattttttc gcctcatcct
    21241 tgttttggga ggattttaac acggctgcgc cggaataggt aacgagtgcg ccgggatctc
    21301 tgtggcggac gaaattcagg cgggtgtgga cattttgtac gcctttttca cgcgcgaaag
    21361 cgtgccagta gtagttgttg atgagggcgg catcgatttc gccgttttca accgcttgaa
    21421 gggcgacgga gtttttagcg taaggcttgc cgtattcttt caggcctttg agccatttca
    21481 atgcggccgc ttcgcctttc agtttgacga tggcgacaat ctgttccaag aacgcgccgg
    21541 aagtggggac gtaaccgatg cggtttttcc atttcggcgt ggcgtaattc aggacggatt
    21601 tttccaaatc tttttcagac agtttgcggg tgtcgtaaac gacgacgcgc gaacgtccgc
    21661 tcagtgccac ccagtctttt ttggcggcaa ccggcacgcc tttgccgcgt gtttcgttga
    21721 tggtggaggc gggcaggggc tctaggaggt tggctgcgga aagggtggcg agtgccggga
    21781 tttgttcgga atagaatacg tcggcggggc ttcggctgcc ttcttctttg atttggccgg
    21841 caagctggtc gcctttggca ctgttgagtt tgactttgat gccggtagcc cgggtaaagg
    21901 catctgcaac ggcttgtgcc gcttctttgt gttggccgtt gtacacggta atgtctgcca
    21961 gcgcgggggt ggcggcggtc agggctgcgg caagcagtgc gtatcggata gatgttttca
    22021 tatcgatttt ctcctaaatg aatgagggtg tataccttgt taagacataa cggggtgtag
    22081 tgtattcctt cttttttata aatgcaaata attatttttt aaatttgtta ttatccgatc
    22141 cggttattgt ttgttctgac ttgtattttt tccgtgcatc gcgcccgtaa ggcggaagcg
    22201 gcgggcaatg tgtggcggaa tgtgggtaaa ggcggcattt tgatttgtcg gaatgctgga
    22261 gaacctctcc ctttaaaacg ccgtctgaac aaggttgccg gaatagtatt gccatcccgg
    22321 cagatacagt ttgtcgggat cttgccaata ttgttcatcc agactgttcg gcagcgaggc
    22381 ggttttgttg tcgagatgtt ttgttaatcc actatatatc ccacatttct tttaggtttt
    22441 taccttctga ttggaggtgg cggatttctt ttcccaatgc gtctgccgcc cgatggatca
    22501 gcattgcgct gtgtaccgcg ccgatttttt tcagaacgga acaagtcttt tcggcggcgg
    22561 gaaaacccca attgcagaca aattgcagta tgccgccgtt gccgatgtcg gcttccgccc
    22621 gccaaatcaa aaccagctcc tgttcacgtc cgtccatgct ttcgagtttg ccgtcatgct
    22681 gttcaaaaag tttgtccacc gcctgccaca tcatctgttc gaagcggtcg gcttgggtat
    22741 ccgtatcggt catcgtgttc ttgcctttta aaaatgccgt ctgaacattt cttcagacgg
    22801 catttggggg ttaagccaac atttcccgcc agcgtttgac ttggaaacgg acttgttcag
    22861 gcgcggtgcc gcccaagtgg ttgcgcgcgt ttaagctgcc ttcgggtgtc agcacgccgt
    22921 aaacgtcgtc ggcaatcaaa tcgctgaaac cttgtaagac ttcgagcggc agttcgctca
    22981 aatcgacgcc cgcttggtcg gcgtggcgca cggcttgggc gacgacttcg tgggcatcgc
    23041 ggaaaggcat gccttttttg accagataat ccgccaaatc ggtggcggta gcgaagccct
    23101 gcatcacggc ggcgcgcata ttgtcgggtt tgacggttac gccgcgcatc atatcggcgt
    23161 aaatccgcaa cgtgtcgata agcgtgtcgg cggtgtcgaa caagggttct ttgtcttcct
    23221 gattgtcttt gttgtacgcc aagggctgcg atttcatcag ggtaatcaag ccgataaggt
    23281 gtccgatgac tcggccggat ttgccgcgca cgagttcggg cacgtcgggg tttttcttct
    23341 gcggcatgat ggacgaacct gtgcagaaac ggtcggcgat gtcgataaag ccgaaacgcg
    23401 gactcatcca caaaatcaat tcttcagaca ggcggctcag gtgaaccata accagcgagg
    23461 cggcggcggt gaactcgatg gcaaaatcgc ggtcggatac ggcatcgagc gagttttggc
    23521 agatttgttc aaagcccaac agtttggcgg taatttcgcg ccgaatcgga taagtcgtac
    23581 cggcaagggc ggctgcgccg agcggcatac ggttgacgcg gcggcggcag tccgccatcc
    23641 gttcgttatc gcgtccgagc atttcgacgt aggcgagcat atggtgtccg aagctgacgg
    23701 gctgggcgac ttgcaggtgg gtaaagcctg gcataacggt ttcggcgttt tgttccgcca
    23761 aatccagcaa tgccgtctga aggctttgaa tcaggcttcg gatgacggta atctggtcgc
    23821 gcagccaaag gcggatgtcg gtggcgactt ggtcgttgcg gctgcggccg gtgtgcaggc
    23881 gtttgcccgc gtcgccgatt ttgtcggtca ggcggcgttc gatgttcatg tggacatctt
    23941 ccaaatcgga cgaccattcg attttgccgc tgcggatttc ttcgaggatt tccgccatgc
    24001 cccgacggat gtccgccaaa tcgccttcgt ccaacacgcc ggtttctttc aacatttgcg
    24061 cgtgtgccag cgagccttga atgtcccatt cggcaagccg tcggtcgaaa ccgatggagg
    24121 cggtgtattg tttgacgagt tcggaaacgg gttcgttgaa acgtccggac caggttttgt
    24181 cgtgcataag gattccttga tggggttatt cggtgcggta tttttccaaa aggcggcgga
    24241 agggttcgcc ggtttcgggg tgtttcaggc cgtaggcgac ggtggcttcg aggtagccca
    24301 gtttgctgcc gcagtcgtag cgcgtgcctt caaaggggtg cgccaggaca aattcgtgat
    24361 cgagcagctt ggcgatgccg tctgtaagct ggatttcgtt gcccgcgccg cgcggcagtc
    24421 cggtcagtaa gtcgaaaatg cgcggggtaa ggatgtagcg tccgacgacg gcaaggttgg
    24481 agggcgcgtc ttcgggcttg ggtttttcga caatgccgat aatgcgttgg aactgtttga
    24541 gctgttcggt ttcgacgatg ccgtatgagc cggtttgcga tgcttcaacg gtttctacgc
    24601 ccaaaatgct gttgccgctg cgcccgtaca cttcgaccat ttgtttgagc gcgcctttgg
    24661 gggcatcaat caggtcgtcg gcaaggataa cggcaaaggg ttcgtctccg atggcggcgc
    24721 gggcgcacaa gacggcgtgt cccaagccca gtgcttccgc ctgacggatg tagaggcagg
    24781 taatgttcgg cggcaggatg ttgcggacgt gttccaacaa tttgtcttta tggcgcattt
    24841 ccaactcggt ttcgagttcg tatgccttgt cgaaatggtc ttcgatgctg cgtttgttgc
    24901 gtccggtaac aaacaccatt tccgtgcagc cggcttccac ggcttcttct acggcgtatt
    24961 ggatcagcgg cttgtcgacg atgggcagca tttctttcgg gcttgccttg gtggcgggca
    25021 ggaagcgtgt tcccatccct gcgacgggga aaacggcttt ccgtatgggt ttcattcttt
    25081 ttcctttgta ttgttttgat gtttaaaggg cgagtttgcg taagagttcg gcaagtgcct
    25141 gcgcgcggtg gctttcgcgg tttttgacct ccgaatccaa ttcggcggcg gttttgccgt
    25201 gtccgggcag ataaaaatac gggtcgtaac cgaaaccgtt ttcaccggcg ggaacgccgt
    25261 tccattgtcc gtgccatacg ccttcggcaa taatcggacg cgggtcgtct ttatggcgga
    25321 caaaaaccaa tacgcagacg tagcaacagc ttttgtcggc tttgccggca agttcggcgg
    25381 caagtttcag gttgttggcg gtatcggatt tgggattgct gccggcgtaa cgtgcggaat
    25441 gtatgcccgg agcaccgttt aaggcggcgg cacagatgcc gctgtcgtcg gcgagtgcgg
    25501 gcagcccgct gtgtccggcg gcgtgccggg cttttgccag cgcattttca acaaaggtgg
    25561 aatagggttc ggggcattcg ggtatgctga actcggattg cggcaatacg gtaatgccgt
    25621 atggttcgaa taggttgccg aattctttga gtttgcctgc attgccgctt gccaaaacga
    25681 ttttttccgg tttttcagac atagcggttt tcctttgcgg cggattgggc ggcgcgtagg
    25741 gatttgtgcc gcaggtagag ggcgaggctg ccgatttgtc cgaacagtgc gccgaatgcg
    25801 aaaagaaagg aggcgacggc gaaggctttg ctgccgacgg tcagcagata agcacccaag
    25861 aggacgagca gcataaatgc cagtgtgaag agggcaacag acaacagata gatttttcgg
    25921 cggttcatgg cgttcggtcg gaaacggtat gttcggatta tagccgattg ggacggtatt
    25981 ccctagagct tggaaaaatg ccgtctgaaa cggcgttcag acggcatggc gggcgttatg
    26041 cctgtttgtt ccaacgttcg atggattctt tgatgacttt tttcgcttct tccgcatcgc
    26101 cccacgattc gactttggtc gtacctgctt ttttcaggtc tttgtaatgg ttgaagtgga
    26161 actcgatttg tttgatgagc tgttgcggca aatcggacaa agttttgtag gcgttgccgt
    26221 tgttgcggtc gtcggcagga acgcagacga ttttgtcgtc tacttcgccg tcgtcaacga
    26281 atttcatcac gccgataacg cgcgcttcca agaatacgcc ggttgccaaa ggttgttcgg
    26341 taacgagcag cacgtccaat tcgtcgccgt cttcgtccaa agtttgggga atgaagccgt
    26401 agttggtcgg tttggcgaag atggcgggtt cgacgcggtc gagttggaat gcggcgagtt
    26461 tgcggttcca ctcgattttg tggttgctgc cggcggggat ttcgttgacg acgttgatga
    26521 tgccgccgtc cacatcgccg ggggtcagga tttggttgaa gtctgccatt tggtttcctt
    26581 tgtttgggaa agtttgaagt ttgaaagtat agcacaaacg tccggctgaa aatgcgcccg
    26641 atgccgtctg aaagggtgta cgggcgcgtg ttaccgtttg cccaaaaacc tgcccagttc
    26701 cagaatcgcg cgcctgttgg acggggaaaa cactttttcc gccgcttctt ccaagccgaa
    26761 ccagccgtag gagacgtgtt cctcgggttg caggacgacg ggcgtatcgc gcgggatttc
    26821 ggcagagaag aggtgttcgc ggttttcaaa cacgcctttt ggatagcggt gccgccagtg
    26881 gtggtagatt tcgtaaaccg tgctgtcgtg ccagtcttga agctgcccgt ccgccagcag
    26941 gatgccggtt tcttcccaaa cttcgcgcct tgccgtttgg gcgacggttt cgcccggttc
    27001 gaggctgccg gttaccgact gccaaaatcc ttccggatgc gtgcgttcga tgagcaggat
    27061 gccgccgtcc ccgctataaa ggacgaccag tgcggaaacg gggtatttga gcggttttgc
    27121 catcggcatc tttcggcggg ctgcggtaat gaaggggcgg attatagcaa acgccgcacg
    27181 ttatggcgtt tatccttttc cgtatccttt tttctgcacg gatgggacgc gccggtgttt
    27241 gccggtaaat tttccgttgt gtcaaaaaga taagggcggt tgtgatttta atgcttgcca
    27301 aagcgtcggg cggaaactat aatccgaaac ttatcgagtc ggagtgtggc gcagtctggt
    27361 agcgcacttg catggggtgc aaggggtcga aggttcgaat cctttcactc cgaccaaaaa
    27421 ttccgaaagc cgctttcaaa agcggctttt ttgccgtccg tatgattatg atgtagagta
    27481 cgcggcgaca gacattcaaa tgccgtctga aaaccgttca gatggcatct ctttatctta
    27541 gtttcattcc gtaccatctt aaggaacatc aaattgggca tttcccgcaa aatatccctt
    27601 attctgtcca tactggcagt gtgcctgccg atgcatgcac acgcctcaga tttggcaaac
    27661 gattctttta tccggcaggt tctcgaccgt cagcatttcg aacccgacgg gaaataccac
    27721 ctattcggca gcagggggga acttgccgag cgcagcggcc atatcggatt gggaaaaata
    27781 caaagccatc agttgggcaa cctgatgatt caacaggcgg ccattaaagg aaatatcggc
    27841 tacattgtcc gcttttccga tcacgggcac gaagtccatt cccccttcga caaccatgcc
    27901 tcacattccg attctgatga agccggtagt cccgttgacg gatttagcct ttaccgcatc
    27961 cattgggacg gatacgaaca ccatcccgcc gacggctatg acgggccaca gggcggcggc
    28021 tatcccgctc ccaaaggcgc gagggatata tacagctacg acataaaagg cgttgcccaa
    28081 aatatccgcc tcaacctgac cgacaaccgc agcaccggac aacggcttgc cgaccgtttc
    28141 cacaatgccg gtagtatgct gacgcaagga gtaggcgacg gattcaaacg cgccacccga
    28201 tacagccccg agctggacag atcgggcaat gccgccgaag ccttcaacgg cactgcagat
    28261 atcgttaaaa acatcatcgg cgcggcagga gaaattgtcg gcgcaggcga tgccgtgcag
    28321 ggcataagcg aaggctcaaa cattgctgtc atgcacggct tgggtctgct ttccaccgaa
    28381 aacaagatgg cgcgcatcaa cgatttggca gatatggcgc aactcaaaga ctatgccgca
    28441 gcagccatcc gcgattgggc agtccaaaac cccaatgccg cacaaggcat agaagccgtc
    28501 agcaatatct ttatggcagc catccccatc aaagggattg gagctgttcg gggaaaatac
    28561 ggcttgggcg gcatcacggc acatcctatc aagcggtcgc agatgggcgc gatcgcattg
    28621 ccgaaaggga aatccgccgt cagcgacaat tttgccgatg cggcatacgc caaatacccg
    28681 tccccttacc attcccgaaa tatccgttca aacttggagc agcgttacgg caaagaaaac
    28741 atcacctcct caaccgtgcc gccgtcaaac ggcaaaaatg tcaaactggc agaccaacgc
    28801 cacccgaaga caggcgtacc gtttgacggt aaagggtttc cgaattttga gaagcacgtg
    28861 aaatatgata cgaagctcga tattcaagaa ttatcggggg gcggtatacc taaggctaag
    28921 cctgtgtttg atgcgaaacc gagatgggag gttgatagga agcttaataa attgacaact
    28981 cgtgagcagg tggagaaaaa tgttcaggaa ataaggaacg gtaatataaa cagtaacttt
    29041 agccaacatg ctcaactaga gagggaaatt aataaactaa aatctgccga tgaaattaat
    29101 tttgcagatg gaatgggaaa atttaccgat agcatgaatg acaaggcttt tagtaggctt
    29161 gtgaaatcag ttaaagagaa tggcttcaca aatccagttg tggagtacgt tgaaataaat
    29221 ggaaaagcat atatcgtaag aggaaataat agggtttttg ctgcagaata ccttggcagg
    29281 atacatgaat taaaatttaa aaaagttgac tttcctgttc ctaatactag ttggaaaaat
    29341 cctactgatg tcttgaatga atcaggtaat gttaagagac ctcgttatag gagtaaataa
    29401 aaatggcaat ttggaattat cggtactacc ttatcccatc agctgctatc agaaataaat
    29461 ttaatgcaaa taaagatatc atacttgatg agtatcgatc taatggtttt cagaatttta
    29521 atgagaataa aagttttgaa aattacttta tcgataatga tgttatatta ttatcaataa
    29581 taaatgaagc aaaaaaacag cttaaattga aagaatcttg ggataaagac gcaatcatgt
    29641 tttgtgataa ttttggtaat agtcttaccg tttggccaga tgatatagag tgcgaacttg
    29701 atttaagatt tgattatact aaatttattc agaaaaccat tgattgggca ataaaatata
    29761 attgtctact tgtaatagaa aaaacaggaa atgtagtttc ccctaatata aataatctga
    29821 tgtatgaaat aaaagcatat ttggaaagca agccgtggcc catatgaaac ctaaactcaa
    29881 caagtaggat gtgtgcggaa tgcacgtatg cggttctcaa ggtttgagct aagaggccgt
    29941 ctgaaaacag aaaaactgtt tcagacgacc tttcttttaa ccagttgcca cagcaaccgg
    30001 acaaaagcag cctacctcca catccatata ggcaatacag gggagatatt ttgtaaattc
    30061 tacgaatatt ttacctgcta aacagggtag gatatggtat gaagcgaaca ttggcttaat
    30121 aaacactatg tcaagatcga atcaggctgg tactagattg ttgtattcca attatggatt
    30181 gctatatata acaactgatc attatatctc tgcaacacgg tttgtagctt ggaaatagga
    30241 gtataactta tgcaattaga gattatcggt agtaaaattt atacggaaca agattttcat
    30301 aatcaaattt caaaaatatt ttctatacaa gattattatg ggaacaatct tgatgcttta
    30361 tgggatttat taagcacaaa tgtagaacga ccgattactt tggtatggaa agatgctatg
    30421 ttctcaaaaa atcaattaga aaatatattt attgaaatcg taaatgttct agaaagagtt
    30481 aagaaacaag atgaggatta tggattcgaa gaaaaattta attatatttt agagtaagta
    30541 aaccctaatt acattacgta cacaggctta aaactcccca gagccaatta agcaagccgt
    30601 aacccatata aaacttaaac tcaacaagta gcatgtgtgc ggaacgtacg catgcggttc
    30661 ttaaagtttg agctaagagg ccgtctaaaa acagaaaaac cgtttcagac ggtctttgtt
    30721 taacgccacc gatccagcgg gttacaaagc gcagtcaatg ccgctgcgcc ttatgcctcc
    30781 gaagcaatag gcagaacatt tggacacggt gaaaacaaaa acgaaaccgc ccaagccgtc
    30841 ggacatttcc ttttaggagc agctattgcc cgcgtcaacg gtggtaattt tgctgccggc
    30901 ggctcggcag cagttgcagc tgaaaaggcg gcggaacatc ttgcccaaca gtataacgac
    30961 ggtaaaaccg caatcgatcc gcaaacaggc gagttcaatg ccaacctgct gccggaacat
    31021 atcaaagagg aaatcaaatc aaagagcggg gtgattgcat cgctgacggg cgcggccgtg
    31081 ggcggcacgc cggtagatgc gcaaaccgga ggtgcggtcg gacagaatgc ggtggaaaac
    31141 aacctctatc tgacatcgga agccttaaag aaggacaagc agacagctcg taaaatttat
    31201 tccgtcataa aagagcaagt caagcatgaa tgcagttcca caggaagaat taccgaatgt
    31261 cgtcaaaata taggacgcat tatcgaattt acccaagaca aacgctttga cagtaggttt
    31321 aaggacttaa aaaaagaatc cttatattac ctaaataaac atcctgattt agtagcctct
    31381 tatttgaagg ctgaatacga aaagctggat agggaagaca aaagtatcct gcaccgctac
    31441 atctcacccg gggctgaaat cgtttcgggc agtttggggg ttgttctttc aggagtagcc
    31501 ggaggcggat cttgtgccga gactttcggc ttaggctgtg ccgccgcttt ggttggtgta
    31561 acgtcttcct acgatcatgt cattactggg acgaaaaact tcggaaaaaa agccagcgag
    31621 caacgaccga cgattgcggt tcaggccttg aagcagttgg ggctgtcgga gcaggctgcg
    31681 gaatatgttc agttctctat agatttgttc agtgtgggta aatcgggggg cggtatacct
    31741 aaggctaagc ctgtgtttga tgcgaaaccg agatgggagg ttgataggaa gcttaataaa
    31801 ttgacaactc gtgagcaggt ggagaaaaat gttcaggaaa cgagaagaag gagtcagagt
    31861 agtcagttta aagcccatgc gcaacgagaa tgggaaaata aaacagggtt agattttaat
    31921 cattttatag gtggtgatat caataagaaa ggcacagtaa caggagggca tagtctaacc
    31981 cgtggtgatg tacgggtgat acaacaaacc tcggcacctg ataaacatgg ggtttatcaa
    32041 gcgacagtgg aaattaaaaa gcctgatgga agttgggaaa tgaaaacgaa aaaaggtggg
    32101 aaagtgatga ccaagcacac catgttccca aaagattggg atgaggctag aattagggct
    32161 gaagttactt cggcttggga aagtagaata atgcttaagg ataataaatg gcagggtaca
    32221 agtaaatcgg gtattaaaat agaaggattt accgaaccta atagaacagc atatcccatt
    32281 tatgaatagt aatatttatg aaaaattagg agattaatga tgaaaagaat taagtgcttt
    32341 tgtgataaat ttccatcagg agatacattt agaatgtgta tcattctgga tgactatgat
    32401 aatagggttg attattatgt aggaatatat gattacatta cgtctacctt aatgagcgat
    32461 atttactatc gatccacgat tgatgagcat ttcaagatta tagaattaat agaaaataat
    32521 ccaaatgaaa tttatgatga tggcggtggt caacaatttt gcctagaatt tcatcatgat
    32581 aaggtcattt tttatcacaa tgaatttgat gaagaagatg gttatccagt attaagctgt
    32641 tcgctgcata cttttaaaac tgctttaatt gcttggaatg cttttttgca attgcctaaa
    32701 agtattcatt cggtggtgga gactgtgatt gaggaataag cataattagc ttaatgaata
    32761 gaatcagcga tatagattgg actgcaaatc cacgcttata cgctgtgcca tgattaacag
    32821 gaagagagca acttggatgg gctagtaggg atggtaagca tttaaatata tcaattgatg
    32881 gaaagattac acacaaatga ctaatttaaa attagatttc tactctgaag ttattataaa
    32941 agattcttgc cctaatgatt tgttagaaaa tggtgagact attaaaggaa aaaaaggagt
    33001 ggtattaggt ataagcgaag aagatggtat aatctatggc tatactattt tactttttga
    33061 tataaaatat tgtatatata tagataagaa atatattata ccgactggaa aaaaattctc
    33121 tcgcgatgat ttttattagc taatttaagt aatttaagca agttttttag atactgaaac
    33181 tggtaattat gtttatgtaa gcataaggag ttcagattga aggattctac agggcaaatg
    33241 aggctggcaa ccaaggattt ggcggaagcc attaaacgag gagaagtacg tagttctgct
    33301 tttacaacaa agcaactaaa ggcaatcgaa aaaggagaat ctaaaatacc ggattacact
    33361 tggcatcatc atcaagacac tggaaggatg caattgatta atgaagactt gcatcatgat
    33421 accggccata tcggttggag agcgatgagt aaaggaaagt aactatgtgg aaaatcataa
    33481 aagaggatag tgatgattta ggatttgcaa ttaaatgctt attctctcaa tctattgatt
    33541 taaatgaatt caaattatgg attgaacaag taatacgaga tatgcccatc gaggacatcc
    33601 ctttttatat ttttgacttg gcggatttcg atggggtaat tgccgatatt gacaatattg
    33661 taggttttgt ttcgagttac agcctatcaa aatcgaaaaa aaaatgcctt gaccggcatt
    33721 gccttcttaa gggggataga tgtctatgac cctcccgttt caaaagaaaa agcattaaaa
    33781 gccttagaga aatatcctga aatttatcag aaatttcagc atttctttcc gtttgtagag
    33841 ctgcctccgc tttaaacagt caaaatgccg tctgaaacga tattcggctt tcagacggca
    33901 tttttgatac aaagcaggta accaaaagag tgtttgacgg aaaaggagaa gctaaaatac
    33961 cgagctatac ttggcatcat catcaggata cgggacgaat gcagttaata tccgaaagaa
    34021 agcatacgca aacagggcat ataggtggtg aagcaatgga taaaggaaaa tgattatgtt
    34081 ggggcttaca cggaacaatt gtgatgattt gggatttgct atattgtgtt atgagcgcaa
    34141 tgcagccgac aaaaaagaat tcttggattg gttatatgga attgtcagga ctgtccctgc
    34201 cgaaagtttt ccaaggtatc tgattgattt aatagattgt ttggaatcag atgattgttc
    34261 cataaatata tataatatta ttggctttgt tccaactacc ggtatgacga aaaaggaaaa
    34321 agatgccgta tatggcatta cctatatacg gaatcaagag ttttacgata ttccgattac
    34381 tagggagaag gcgttaaaag ccttaaaaaa acatcctgaa atttatcaga agtttcggca
    34441 tttctttccg tttgtagaac tgcccccgct ttaaacagtc aaaatgccgt ctgaaacgat
    34501 attcggcttt cagacggtat ttttgatata aagcgggtaa ctaaaagagc gtttgacggc
    34561 aaaggaagat aattatgtgg aaaattataa aagaggatag taatgattta ggattcgcaa
    34621 ttaaatgctt attctctcaa tctattgatt taaatgaatt caagttatgg attgaacaag
    34681 taatacgaga tatgcccatt gaggacatcc ctttttatat ttttgatttg gcggatttcg
    34741 atgtaggaat tggcgatatt ggcaatattg taggttttgc tccgagttcc agcctgccga
    34801 aatcgaaaaa aaatgccttg accggcattg ccttcttaag ggggatagat gtctatgacc
    34861 ctcccgtttc aaaagaaaaa gcattaaaag ccttaaagaa acatcctgaa atttatcaga
    34921 aatttcagca tttctttccg tttgtagagc tgcctccgct ttaaacagtc aaaatgccgt
    34981 ctgaaagacc gtccgccgtt cagacggcat ttttgatata aagcggataa ctaaaagagc
    35041 gtttgacgga gaaggagaag ctaaaatacc ggatgtatcg gttgggaagc aatggataaa
    35101 ggtaaataat tatgtggaaa attagtaaag aaaattgtga agatttagga tttgcaatag
    35161 tctgtatgtt ctatgatgct attaatcttt ctgaatttaa attatggttg gatatagttg
    35221 tcagagatac tcctattgat acaattccat tgtatatttt tgatttgatt gattttgata
    35281 agagtatagg ggaaatttat gatgtaattg gagtcgttaa ttatggttac atttcaaatg
    35341 atcaaaaaaa tgcattaacg ggcattgcct tcttaagggg gatagatgtc tatgatccgc
    35401 ctatttcaaa agaaaaagca ttaaaagcct tagagaaata tcctgaaatt tatcagaggt
    35461 ttcagcattt ctttcctttt gtagagcttc cgctttttta aaagacaata tgccgtctga
    35521 aaagttttca gacggcattt tttatttctt ccagtaggcg ggggtgaaga ggatgaagac
    35581 ggtgaagatt tccagcctgc ccaagagcat ggcggtaacg cagatccatt tctgcatcac
    35641 gtccaaaccg gcgtaattgc cggcgggccc gacttcgccc aggccggggc cggcgttggt
    35701 gatgcaggcg atgacggcgg tgaaggcggt ggtaaattcc ataccgctcg ccatcagcag
    35761 gaagctgaag aggacgacgg tcataaagta gatgaagatg aaggacataa cggtcagcgc
    35821 gaggcggtcg ggtatggcct tgccgctgat tttgacggtg cggacggctt tggggtgcag
    35881 cagcaccatc atttcgcgca ggctgaattt gaacaggacg agggcgcgta tggttttgat
    35941 gccgccgccg gtcgagccgg agttggcgag gatgttggcg aggaaaaaca tccacaggga
    36001 aatcaggagc ggccattgtg cgaagtcggt gttggccagc ccgtttgcca gtccgatgga
    36061 gacgaagttg aaggcggtgt agcgcaggga ttcggtaaaa ccggcgtaat agccggtgtg
    36121 ccacaggtac agggcggcgg caaggatgct gccggagagc agcagcagca tcgtccggca
    36181 ttcttcgtct ttccaatagg ttttgaggct gcggctgttg agggcggcga aatggttggc
    36241 aaaattgatg ccgccgacaa tggtgaaaac gatgatgacc gcttcgatga ggggggagtt
    36301 gtaataagct atgctggcat cgtgggtgga aaacccgccc agcgagaggg tcgccatcgc
    36361 gtgacagacg gcatcgaacc agcccatccc ggcaaaatgc aggcaggctg ccgcgaggat
    36421 ggtgatcagg gtgtagccga accaaagttt tttcgccact tgggaaatgc gcggcgacat
    36481 tttgctttct ttgtcaatgc cggggatttc ggctttgaat aactgcgtgc cgcctacgcc
    36541 gagcataggc aggatggcga cggcaaggac gatgatgccc atcccgccca gccagttgag
    36601 catatgccgc caaaagttga cggagggggc gagcccgtcg acgtggggga tgacggtcgc
    36661 gccggtggtg gtcagtcccg acatcgattc aaaaaatgcg tcggtaaagc ccatattcgg
    36721 gaaatacagg tacatcggca tcgccgccat agcggcaaac gccagccaca acatcaggac
    36781 gagggtgaag ccgtcgcgcg ggcgcagttc gcgcctgaac cggagggtgg cgagccggac
    36841 gatgcacgag ccggaaaggg taacggtcgc ggtggtggcg aaggcggtgt acgcgccgtc
    36901 cgaaaaggcg taggagaggg cggcgggtat cagcaggata aaggaaaaca gcatacccag
    36961 tcgggagagg acgtgggcga tgggcaggat tttgtgcata gtggggcggt ccgttatttt
    37021 gcgaagcttt tccagtctat gccgccggcg gcttggactt gggtaatttc ttccgtttcg
    37081 aggttgacgg cggtcagctg tccgccccac agcgcgccgg tgtccagcga gatgacgttg
    37141 tcggcattcg tgtagcccag cgaggaccag tgtccgaaga tgatggtgcg gtcgaggttt
    37201 tgccggtcgg gggctttgaa ccacgggcgc aggtaaggcg gcattttttt cactgtggat
    37261 ttgtagtcga aatccagttc gtttttaaag gtcagggcgc gcatccgcgt gaaggcgttg
    37321 acgatgaagc gcaggcgggc atagcctttc aaaccttcgt cccacgcggc cggtttgttg
    37381 ccgtacattt tggagaagaa tttgacgtat tttttgccgc gcagttcggc ttcggcttct
    37441 ctagcgagcg attcggcttt ggcgatgcgc cattgcggca ggatgccggc gtgtaccatc
    37501 acgcggctgc cctcgcgtat caacagcggt tgcgcacgca gccagtcgag catttttttt
    37561 ccgtcggggt gtttgagtat gggttcgatt gtgtcgctgc gtttgggcgc gccttcgccg
    37621 cagccgacag cgagcaggtg caggtcgtgg ttgccgagga cgatttgcac gctgttttcg
    37681 tgccggatgc agaattgcag cgtttcgagg gatttcgggc cgcggttgac gatgtcgccc
    37741 gtcagccaga gggtgtccgt gccgtggttg aaaccgattt tgccgagcag cgcggtcagt
    37801 tcgtcgaaac agccttgtat gtcgccgatt gcgtaatgtg ccattgcaga tgttgtgaag
    37861 tgggaaagtg ttgcggttcg gacggcatgg ttttgaaata tcatgcagtc cgaacgtgga
    37921 attatgcgtt caaaacgagg acggcttcgg cttcgacctg cacgcctttt ggcagggagg
    37981 caacgccgac ggcggcgcgg gcggggaagg gctcggcaat aaattccgcc atcacttcgt
    38041 tgaagacggc gaaattgccc aagtcggtca ggtaggcgtt gagtttgacg atgtcggcca
    38101 gcgtgccgcc tgccgcttcg gcgatggctt gcaggttttg gaacacttgg cgcgcttcgg
    38161 cgcggaaatc gccgttgccg acgacggtca tcgtggcggg atcgaggggg atttgaccgc
    38221 tcatgtaaac ggtgtcgcct gctcggacgg cttggctgta cgcgccgatg gcggcggggg
    38281 ctttgtcggt gtggatgatg gttttggaca tttcggattc ctcaaaaaat agggcggcag
    38341 aagccgcagc attcgggatt atcgtacaaa accgccggct tgtgtagttg cggtggcaga
    38401 aaacaaaacc gccgaaggct cggcggtttg cagaataagg cgcatatcag aatttgacgc
    38461 gcacgccggc ggacagttcg ccggaacgga cgtttttgac agtgttgact ttgccgatgt
    38521 agttgtagcg gtagccggca tccaaatcga cattcggggt aacggcatag cttacgcccg
    38581 ccaatacgcc gaggccggtg gaggtttggc tgaagctgtc gctgccgccc aagtcgacgg
    38641 aggcgcggtt gaggctcaag cgcgcgccga gatacggttt gacgggcgat tgggtgtcga
    38701 agtcgtaaat ggcggacgcg ccgatgctgt aaagtttgaa atcggtggat ggggctttat
    38761 agtttttgta gcgcgtgtaa tcgacggcga agcggaggtc gttgatgcgg tagcctgcgg
    38821 agatgcgcgg gctgaagcct ttggcagaac ctaaagagct tgaggctttt gcgtgtgcgg
    38881 catcggcttg gacgtaaaag ccggatgcgc cttccgccag tgcggcggcc gggagagcga
    38941 gggcaatcag tgtggcaagt gcttttttca tattttggtt cctttatggt cagttagaaa
    39001 aattgttaag aatccgttaa aaaatcctgc tgtattatac ttaaattttc tttttgcatc
    39061 gtaatatttt caatacttca agatacgtag cggtatccgg ctgctttgcc gacggcaaag
    39121 ccgttaaccc gcgcgttgcc tttaaatggt ggcggcggca tcacgcggcg gatgggtgaa
    39181 acttgcaaac ggtttggaaa aaacagcggt atctgtcgga ttgttgcagg tgcaggcata
    39241 cggttttgtg tgcgactgtg ccttaagcgt cggacatttc tggcggcggc tgtgccgtct
    39301 gaaacgcccg gcgggggatg cggctgcgtt ttccatcgat aagcatattt tccggacgtg
    39361 ttcggggcgg gttttcccgg gcggccgccg atttgtttgc gcttatatag tggattaaca
    39421 aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtatggcaa ggagaggcaa
    39481 cgcaacgccg tactggtttt tgttaatcca ctataaaaaa cactgcagca aatcgtttaa
    39541 aaacaagcgt cctttttcgg tcgggcggaa tacggcgggg tcggtttcca gcaggccttt
    39601 ttgccttgcc gtttcgattt gcgccatgat tttggcactc ggtacgcccg tgcgctcctg
    39661 caacatcgcg gcgggtacgc cgtcggtcag gcgcagggcg ttcatcataa actcgaacgg
    39721 caaatcttcg gcggcaacgg ttttgcgttc gacggcttca ctcggttggc tttgcattaa
    39781 ggcgaggtag tcgttggggt ggcggcggcg gacggtgcgc tcgatgcggt cgggatagga
    39841 aattttgccg tgcgcgcccg cgcctatgcc taaataatcg ccgaactgcc agtagttcaa
    39901 attgtggcgg cactgcatgg ctggtttcgc aaaagccgat gtttcgtagt ggacaaaacc
    39961 cgcgccttcc agcgcgccgt gtaccgcgtc ttcgatgtcg agggcggctt cgtcttgcgg
    40021 caaacctttc ggcggcgtat gaccgaacgg cgtgttcggt tccatcgtca gatgatacgc
    40081 gctgatgtgg gtcgcacccg tagcgatggc ggtttgtacg tcgtccaatg ccgtctgaac
    40141 ggtttggttc ggcagggcat acatcaagtc gatattgact ttatcaaata atttcaaggc
    40201 ggtatcgata gcggttaagg cttccttacc gttgtggacg cgccccagcc ttgagagcat
    40261 atcgtcgttg aaactctgta cgccaataga aagccgcgtg atgcctgcgt ctttaaatcc
    40321 ttgaaacttc tcgatttcaa acgtccccgg attggcttcc aacgtaattt ccgcttccgg
    40381 ctgcaagcgc aacagcgaac gcacgccgct caacaaacgg tcaatcgatt ccgcctgaaa
    40441 caggctgggc gtaccgccgc cgaaaaagat cgtttccacc ggtctgcccc aaatattggg
    40501 caattcaagc tgcaagtcgg tcagtagcgc gtcgatatag gcggcttcgg gcaatccgtt
    40561 tttcaggctg tgggaattga agtcgcaata cgggcatttt ttgatgcacc acgggatgtg
    40621 gatgtaaagc gacaggggcg gcagggcggt gagtcgggtg cggtttggaa aggaaatggt
    40681 gtgcatggtg cggttcggaa aagtgggcaa tgccgtctga aggcggttca gacggcatgg
    40741 gttcagccga gcagggtaag cagttcggct tcgctgagga cggaaacgcc caaggcattg
    40801 gctttttcca gcttgctgcc cgcggcttct ccagcgacga cgtagtcggt ttttttggac
    40861 acgctgccgg aaactttgcc gcctgcggct tcgattaggg attgggcttg gtcgcgtttg
    40921 agggtgggca ggatgccggt taacacgaag gttttgcctg ctacggcttt attgatgccg
    40981 tctgaacctt gcgccgcctc gtcttcagac ggcatttgcg cgaagaaggt tttcaggttt
    41041 tcgagcaggg cggcgttttg tggttcgttg cgccacgcct gccagtcggt ggggagggct
    41101 ttgtcggttt gcagaccctc tatacttttg ccggcgagtt cccataaggc ttgggctttg
    41161 ttttcgctaa ttttgaagtc gggcaggcgg gcgatccagc gttgcggttc ggcatattgt
    41221 gcggcaggca ggctgacggc ttgggcttgc ggggcaacgc ctgcggcgag cagctcgtct
    41281 atcatcgcct gctgttcggc ttgggcgaag aagtgggcaa tggaatgcgc cactaccgtg
    41341 ccgatgtcgg gcaggcaggc gaggatgggt tcgggggcgc ggcggacgcg ttccaatgtg
    41401 ccgaatgcct gcgccagcgt tttggcggtg cgttcgccga cgtggcggat gccgagcgcg
    41461 aacaggaagc gggcgagttc gggcgttttg ccggattcta tgcctgcgag gatgttttcc
    41521 gcccacttgg tcggttgttt tttatgtttg cccgacgcgc cgaccgaact gccttcagac
    41581 ggcatttgat ccgattcggc aacggttttg tccgccgttt ccttcatttt ttgcagggtc
    41641 ggaatatcga ggcagtagag gtcggcgaag tggcggacga ggtcttgggc gacaagctgt
    41701 tcgatttgtt tttcacccaa gccgtcgatg tccatcgctt tgcgcgaggc gaagtggatt
    41761 aagccttgcg cgcgttgtgc ctgacaaagc atgccgccgc tgcatcgggc gacggcttcg
    41821 ccttcttcgc gttcgatttc gctgcggcag atggggcaat gggtcggcag gcggtagggc
    41881 ttgtagagcg gaacggattg ggtttggttt gcagccggtg cttcggcaaa caaatcgtcc
    41941 tgccgatgcc cgatgccgtc tgaaacagca acggcggttt cctgcatcgg gcggcgttca
    42001 aaaatcacac gcacgacttc gggaatcacg tctccagcgc ggcgcacgac gacggtatcg
    42061 ccgacgcgca cgtcttttcg ggaaacttcg tcctgattgt gcagggtggc gttggtaacg
    42121 gttacgccgc cgacgaatac gggttgtaat cgggcaaccg gcgttaccgc gcccgtcctg
    42181 ccgatttgca cgtcaatcgc ttcgacaatg gtcagggctt cttcggcagg gaatttgtgg
    42241 gcaaccgccc aacgcggcgc gcgggagatg aagccgagtt cgtgctgttg cgccaagctg
    42301 ttgactttga cgaccatgcc gtcgatttcg tagggcagtt cggggcgttt ttgctgcatg
    42361 tgtccgtaaa acgccaatac ttcgtcgata tttttgaaac agccgaaatt gccattgggc
    42421 agactgaagc cgagtgcttg gaaataggcg agttcttgga tgtgttcttc cgcgacgaaa
    42481 ccgccttgct gacgggcgac ggagtagggg aaaaagtgca gtttgcgttg cgcagtgatg
    42541 cgcgaatcga gttggcgcag gctgccggcg gcggcgttgc gcggattggc aaagggtttt
    42601 tgcccgtttt cggcttgtct tttattgagg gcggcaaaat cggctttttg catcagtact
    42661 tcgccgcgta cttcgatgag ttcgggcgta ttttcgccgt gcagccgcaa ggggatgttg
    42721 gatacggttt tgatgttttg ggtaacgtct tcgcccgttg tgccgtcgcc gcgcgttgcc
    42781 gcctgtacca atacgccgtc gcggtagagc aggctgatgg cgaggccgtc gaatttaggt
    42841 tcgataacgt attcgggttt gccgccgtcc aaaccgtcgc gcacgcgttg gtcgaaagcg
    42901 tacatttctg catggtcgaa cacgccgttt tcatcttgcg gggaaaaggc gttggtcagc
    42961 gacagcatcg gcacttcgtg gcgtacttcg gcaaatcccg ccagaggctc gccgccgacg
    43021 cgctgggtcg ggctgtcggg cagtttgagc tcgggatggt ttcgttccaa cgcttcgagc
    43081 tcgcggaata atttgtcgta ttcggcatcg ggtacgctgg gcgcgtcgag ggtgtagtat
    43141 tcgtaggcat agcggttgag caggtcggtg aggtggcgga tgtgttgtgc ggcaaattgt
    43201 tttatatcac tatcagacgg tttaagaaga ttggtaaagt tagtgttatg ttttgagttt
    43261 ggattcatga gagaaggttt tcagacgacc tttgtctgat acgggatgaa acgggcaaag
    43321 gtcgtctgaa aaatgatagg ttgaaaacag ctgaatttta cccgaaaaaa agcggatatg
    43381 ccgtaacgac atatccgctt tgattgcatt cgattttagg agaacaggcg caatgcggtt
    43441 ttgccgcccg gttcgatacc gactttgagc atctcggact gacgcgccaa tacataagtg
    43501 cgcacgtctt tgagccattg ggtcgaaact tcttccattt tgtcgttgac cagattcagg
    43561 ttcaactggc cggacaggcg taccgccaaa tccataaaca aatcgtcgaa ggttttttcg
    43621 cctgccggag agtgcgggat gtcgagcagc atactgaagc ctttgtagga ctggttgtcc
    43681 aaaagggcat tggtaaacgg ctcgttgttg agcgagcaga tggagaacat ggtcgagccc
    43741 gacgtgtcgg tatagtggaa cgcgccgtcg tcttccagga cgaaacccac gcccgttacg
    43801 gcggaacgca gttctacgcc gctgatgctg gtcggggaaa ccaaatggat ggcgatggtc
    43861 tggtcgacgc gcgcgcagaa tgcgtccagt gcggaagcca cttcgataaa ggcggcaagg
    43921 tcggtgtgca gcgtctgacc gcccatgctt tgtgcgaatg cgtccacctg gcggttgaat
    43981 gcggagagtt cttcctgcga ggcaagtccg ttgcggctga ctgcctgaat acccacgata
    44041 aatgcctgat agcggatgcc cgggatgggt tcggcaatct ggaaatggtc gtccatggtg
    44101 cagccgacaa tctggtagcg gcagcggttg gaaaggcgcg gcagtgcgtg cagttctttg
    44161 gcttcggtca gcgcgatata ggagatgaaa tcgaagcgca cgtcaaacca cggcagttcg
    44221 acttttgaca gctctttgag cgtaatcagc ggttttgccg gcgtttgcgg aacgggaacg
    44281 ggttttgccg gcgcgtcggc aggtttcggt gcggaatgtc cggtttgggg ttcggaaacg
    44341 gtgtgggcgg agttgccgat aatgccgctt tcttccaagg cggtttcgat ttcggttttg
    44401 aacggggagg cttttgcctg tttctgcttg gcgatgtaga cggcatcctg ttcttgcagg
    44461 ttgcgcatag cagggtcttg gagttttgcc gtttttttga ccgccggttg gggtttcggc
    44521 atcatgactg acccgccgga cggtttgccg tcgcggacat ggctggtttt gctgttgagc
    44581 agggcatctt tgtcggagtg cccgaactgg tcgcgcactt ttttgcggta ttggttttcc
    44641 tgatacatat tgtaggcgac aacggcgagg acggcggcga ggaacagtac gatgtaaatc
    44701 atggcaatca ctttaaattt cgggatgcag gatgcgcaaa gtgcgggtac tgcggttaaa
    44761 tcgggcttgc gtttccggca gtctgacgga acggccggtt ataacgtttg aattataacg
    44821 aaaattgcag ggtctgacag cagtgtgtcg aaataagcgg aaattttccg aaatgccgtc
    44881 taaaatctgt ggttttcaga cggcatttct gtccacggga aaccctttcc cccgtatccg
    44941 ccgccagtcg aaaaaatgac cggggtcggt tttgcggccg ggcgcgatgt cttggtgccc
    45001 cgttaccgcc gtgatggggt agcggcggca gattgcgtcc aacaaggctt cgagcgaacg
    45061 gtattgcgct tcggtaaagg gttcgaaatc gcagccttcc agttcgatgc cgatggaaaa
    45121 tgcgttgcat ttttcccgtc cgcgaaacga ggatacgccg gcatggtatg ccatattgtc
    45181 gcaggaaacg aactgtaccg tttcgccgtc gcgtttgatt aaaaaatggc tggatacgcg
    45241 caaagtgtgt atcaatccga aaaacgggtg gtcgttcggg tctaggcgat tggcaaaaag
    45301 cctctcaacc gcatccgtac catattcgaa cggcggcagc gagatattgt gcaatacgac
    45361 aagggaaacc tcttctttgg actccctcgg gccgaaattc ggcgacggaa tgtggcgcac
    45421 gctttgcagc caaccgtcct gccagggtgc cgtagcggga ttgtccatga tgtcctttct
    45481 gtcttatggg gtaatttggg ttatactgtc gcccgaattt taagatgtat tccgatattg
    45541 ggaatcctac catgttgaga aaattgttga aatggactgc cgtttttttg accgtatcgg
    45601 cagccgtttt cgccgcgctg cttttcgtcc ctaaagacaa cggcagggca taccgaatca
    45661 aaattgccaa aaaccagggt atttcgtcgg tcggcaggaa acttgccgaa gaccgcatcg
    45721 tgttcagcag gcatgttttg acggcggcgg cctacgtttt gggtgtgcac aacaggctgc
    45781 atacggggac gtacagattg ccttcggaag tgtctgcttg ggatatcttg cagaaaatgc
    45841 gcggcggcag gccggattcc gttaccgtgc agattatcga aggttcgcgt ttttcgcata
    45901 tgaggaaagt catcgacgca acgcccgaca tcggacacga caccaaaggc tggagcaatg
    45961 aaaaactgat ggcggaagtt gcccctgatg ccttcagcgg caatcctgaa gggcagtttt
    46021 tccccgacag ctacgaagtt gacgcgggta gcagcgattt gcagatttac caaaccgcct
    46081 acaaggcgat gcaacgccgt ctgaacgagg catgggaaag caggcaggac gggctgcctt
    46141 ataaaaaccc ttatgaaatg ctgattatgg cgagccttat cgaaaaggaa acggggcatg
    46201 aagccgaccg cgaccatgtc gcttccgtct tcgtcaaccg gctgaaaatc ggtatgcgcc
    46261 tgcaaaccga cccgtccgtg atttacggca tgggtgcggc atacaagggc aaaatccgta
    46321 aagccgacct gcgccgcgac acgccgtaca acacctacac gcgcggcggt ctgccgccaa
    46381 ccccgattgc gctgcccggc aaggcggcac tcgatgccgc cgcccatccg tccggtgaaa
    46441 aatacctgta tttcgtgtcc aaaatggacg gtacgggctt gagccagttc agccatgatt
    46501 tgaccgaaca caacgccgcc gtccgcaaat atattttgaa aaaataaacc atgccgtctg
    46561 aaaagtttgt gttttcagac ggcataccct taccggaact gcaagcatga aaccgcaatt
    46621 catcactttg gacggcatag acggtgccgg caaatccacc aaccttgccg tcatcaaggc
    46681 atggtttgaa cggagggggc tgcccgtgct gttcacgcgc gaaccgggcg gaacgccggt
    46741 cggtgaggcc ttgcgcgaaa tcctgctcaa ccctgaaacc aaagccggtt tgcgtgcaga
    46801 aacactgatg atgttcgccg ccagaatgca gcatattgaa gacgtgatat tgcctgcact
    46861 ttcagacggc atccatgtcg tgtccgaccg ttttaccgat gcgaccttcg cctatcaggg
    46921 cggcgggcgg ggaatgccgt ctgaagacat tgaaattttg gaacattggg tgcagggcgg
    46981 tttgcgcccc gatttgaccc tgctgttgga tgtgccgctg gaagtgtcga tggcgcgtat
    47041 cgggcagacg cgcgagaaag accggttcga gcaggaacag gcagatttct tcatgcgtgt
    47101 gcgcagcgtt tatctgaacc gtgccgccgc ctgtccggaa cgttacgccg ttatcgacag
    47161 taaccgcaac ttggatgaag tcagaaacag catagaaaag gtgttggacg ggcatttcgg
    47221 ctgctgatgc ggcaaatatt gaaacaagcg catccgcccg cgccgaaaat caaacggcag
    47281 tgccgcaggt gaaaatggcg gtatgcgcca aactttcggc atgatagaat tacgctcggt
    47341 tacaaggcag gatgcgtcgg caatattaac gaaccgcccg taacatgatg acccgaaagc
    47401 gtttcggaca gtccgattca aatctttttc tcgcaacagg attgacacat ggaaaactca
    47461 ttgaaagaag ccgccctcaa gttccacgaa ttacccgttc cgggcaaaat ttccgttacc
    47521 ccgaccaaat ctctggcgac cgacaaagat ttggcgttgg cgtactctcc gggcgtagcc
    47581 gctccttgta tggaaatcca tgccgatccg caaaatgcct acaaatacac cgccaaaggc
    47641 aacttggtcg ctgtcatttc caacggtacg gccgttttgg gcttgggcga catcggcgcg
    47701 ctggcgggca aacccgtgat ggaaggcaaa ggcgtattgt tcaaaaaatt cgccggtgtg
    47761 gacgtgttcg acatcgaaat cgatgaaaaa gacccgcaaa aactcgtgga catcatcgcc
    47821 gctttagagc cgaccttcgg cggcatcaac ctcgaagaca tcaaagcacc cgagtgtttc
    47881 tacatcgaac gcgaattacg caaacgctgc aaaatccccg tattccacga cgaccagcac
    47941 ggcacggcca tcattaccgc cgccgccgta ttgaacgccc tgcgttttac cggccgtaaa
    48001 atcgaagaag cgactttggt gtgttccggc gcaggtgcgg ccgcgattgc ctgcttgaac
    48061 caattgctgg atttgggctt gaaacgcgaa aacgtgaccg tttgcgactc caaaggcgtg
    48121 atttaccaaa cccgcgaaga caaagaccgc atggatgagt ctaaacagtt ctacgccatt
    48181 gaagacaacg gccagcgcgt gcttgccgat gccgtcaaag gcaaagacat cttcttgggc
    48241 ctctccggcg cgaacctgct gacgcctgaa atgctgaaca ccatgaacga aaaacccatc
    48301 gtgttcgcca tggccaaccc gaatccggaa attctgccgc cgctggcaaa agaaacccgt
    48361 ccggacgtgg ttatcggtac cggccgttcc gacttcccga accaagtcaa caatgtattg
    48421 tgcttcccgt tcatcttccg tggcgcgttg gatgtcggcg cgaccaccat caacgaagaa
    48481 atgaaacgcg cctgcgtgta tgctttggcg gatttggcga tggaagaagt aaccgaagaa
    48541 gtggttgccg cttacggtaa gaaatttgaa ttcggcgcgg aatacctgat tccgactccg
    48601 ttcgattccc gcctgctgcc gcgcgttgct acggctgccg ccaaagcagc gatggaaagc
    48661 ggcgtggcaa cccgtccgat tgccgacttt gaagcctacg ccgccaagct gggcgaatgg
    48721 aagctgtaag ccgtttgcgg tttaaaatgc cgtctgaact gttttcaggc ggtattttgc
    48781 tgtcagattg atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc tgcagacagt
    48841 acaaatagta cggaaccgat ttacttggtg cttgagcacc ttagagaatc gttctctttg
    48901 agctaaggcg aggcaacgct gtactggttt ttgttaatcc actataaatg aaagatactg
    48961 gaaaatgaaa gagatgaaac ctgtccgtta tcatattggc gatatgcccg agacttcaaa
    49021 acaaaccgcc tcccgtcatg acgacagggc agtgggtgtt gacgatgatt gttttcatga
    49081 ttcctttggt caatttttgt ttgggtgttc ggcagaggca acccgaaccg cgccaatttc
    49141 tgtaaagcgc agttgcttat ttacctgatt ggttcgctta tcggtttggt cttcgcgttg
    49201 tttataggtg ggtctgtatc gggtacgcat gattaatgcc ccgggctgat tttgcttcga
    49261 ggatttgtat cgaatatgcc gaattgtttc aaatttcata ccgttatcga acggcattgg
    49321 caaaaacctt atccggtttt gtcttttctg cttaagccgc tctccgggct gtttgccaaa
    49381 attgcggcaa aacggcggac ggatttttta tcgggaaaac ggcaaagcga aaagctgccc
    49441 gtgcctgtgg tcgtggtcgg caatattcac gcgggtggga cggggaaaac gccgattgtt
    49501 gccgcgctgg tgtcgggttt gcaggaaaag ggcgtcaagg tcggcatcat cagccggggc
    49561 tacgggcgca agagcaaggc ggttcatgta ttgaatgctg agagccgagc ggaagatgcg
    49621 ggcgatgagc ctttgctgct gttccgcaaa accggtgcgc cgacggcggt gggcagcagc
    49681 cgtgcagagg caggcagggc gttgctggcg gcgcatcccg acatcggact gattgtggcg
    49741 gacgacggtt tgcagcatta cgccctgcgg cgggatgtgg aaattgcggt gtttccggcg
    49801 gcggatacgg ggcgcacgga tttggattta ctgcccaacg gcagtttgcg cgaacctttg
    49861 ttgcggctgg attcggtgga tgcggtcgtc gtcagcggcg gcaaggcgga tgcgctgttt
    49921 aggccgtctg aaaatatgtt tcacagccgt atcgaagcgg gacggattta ccgtttgaac
    49981 aatccgtccg aaatactgga cacaggccgt ctgaaaaatc aaaccgtcgt cgccgtggca
    50041 ggtattgcca agccggcgcg ttttttcgat tcgttgcgga atatgggcat taccgtgaag
    50101 cgaaccgtcg cgctgcccga ccacgccgac atttcggcgg cagatttgcc cgatgcggac
    50161 gcggtcatta ttacggagaa agatgcggtc aaattttcag acggcatttg caccgataat
    50221 gtttgggtgt tgcccgtttg tgcgataatc gaacctgatt tggcggcgtt tgtgttggag
    50281 cggttggaag gtgccgaagg ccgtctgaaa gcgcggtttg gatgaagtga taacggactg
    50341 gaataagaac gccctacgcc gtcattcccg cgcaggtggg aatctggatc ttgatttttc
    50401 agaaatgacc aagaggtttc cgaagtccta aatctccgga ttcccgcctg cgcaggaata
    50461 atggaagccg gttgtatttt ttatctgcat taatcatttg ttaaaggatt gaatattaaa
    50521 ttgaaaacct tgttattgcc cttcgccacg ctggcattgt gcaccaacgc ttttgccgcc
    50581 ccgcccagcg acgcgtcgtt ggcgcgttgg ctggatacgc agaattttga ccgggatata
    50641 gaaaaaaata tgattgaggg ctttaatgcc ggatttaaac cgtatgcgga caaagccctt
    50701 gccgaaatgc cggaagcgaa aaaagatcag gcggcaaaag cctttaaccg ctatcgtgag
    50761 aatgttttga aagatttgat tacgcccgaa gtgaaacagg ctgtccgcaa tactttattg
    50821 aagaatgccc gtgagatata cacgcaagaa gaaattgacg gcatgattgc cttttacggt
    50881 tcgcctgtcg gtcagtccgt cgttgccaaa aatccgcgct taatcaagaa atcgatgagt
    50941 gaaatagcag tatcttggac tgcattgtca gggaaaatcg cgcgacatca tctgcccgcg
    51001 tttacggaag agttgcggcg catcatctgc ggcggtaaaa atcccgatgc gggctgtaaa
    51061 caagccggac aggttgggaa aaggcatcag aaataaatga tagccgtctg aaatattgaa
    51121 gagggcatcc gattgattga accatcaaac ccgaaagcaa ccctatggaa aaaaaattct
    51181 tagacatcct cgtctgcccc gttaccaaag gcaggctgga atatcatcag gacaaacagg
    51241 aattgtggag ccgtcaggcg aagcttgcct atccgattaa agacggcatc ccctatatgc
    51301 tggaaaacga agcgcgagcg ttgagcgaag aggaactcaa agtatgaccg aatttgtcat
    51361 attgattccg gcgcggctgg attcgtcgcg cctgcccgga aaagccttgg cggacatcca
    51421 cggcaaaccg atggtcgtgc gcgttgccga acaggcggca aaaagtaaag ctgtgcgcgt
    51481 cgtcgttgcc accgaccatc ccgatattca gacggcctgt caggcgcacg gcgtcgaagt
    51541 cgtcatgact tcaaaccggc acgaaagcgg cacgacgcgc cttgccgaag cctctgccgc
    51601 gctgaagctg ccgccgcatc tggtggttgt caacgtacag ggcgacgagc cgctgattgc
    51661 acctgaactc atcgaccgca ccgccgaagt actcgtcgaa aacaacgtcc aaatggcgac
    51721 cgccgcccac gaattgcacg atttcgacga attgatgaat cccaatgccg tcaaagttgt
    51781 cctcgacaaa aaccgcaacg ccatctactt cagccgcgcc ccgattccct atccgcgtga
    51841 tgtgatgcgt gccgaaaaac gcgaattgcc gtctgaaacc gccgtcctgc gccatatcgg
    51901 catctacgcc taccgcgccg gcttcctgca acgctacgcc gaaatgagcg tctcgccgct
    51961 ggaaaccatc gaatcgctgg agcaactgcg cgtcctgtgg cacggctacc cgattgccgt
    52021 cgaaaccgcc aaagaagctc ctgccgccgg cgtagatacg caggaggatt tggacaggat
    52081 tcgcgctgta tttcagacta tataaaatag attcaaaggg aaaagatatg cagcaacata
    52141 ttgaaaagtg gcaacacttg agccgggaag aacagaaaat ccttgctgaa gtatggggtc
    52201 tcgtgcaaaa cgacgatcag gaggttcact atgaaatgct caaattgaac gcacccgacg
    52261 aagccagtgg cgaattttgg ttcagaatgg cagaaacact cagcaccctg ccgcccaacc
    52321 gttccctcga ccttagaatg aacggcggca ggctggcgac cgccgtatcc atcctttccg
    52381 tcatgattga agacaatccc gacataccgc agctttgggc gcaaaaaatt accgcgctca
    52441 attatagtgg attaaattta aaccagtacg gcgttgcctc gccttgtcgt actatctgta
    52501 ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactatatt tggcacacgg
    52561 acacaaagcc cgtgccgacg gtttggcaca acagcccgac aaagcggcag aagccaacga
    52621 ggaggaatac ctgaccaaag ccctgtcgca aaacctgctg tcaacattgg atgtcgcgct
    52681 tgcacgtttt cctgaagacg cgtggtttca ggaaatcaaa caggatgcac aaaagcattt
    52741 tgcttgagga tgtggcagtc aggaatattt ccattcagga agaaaagaag tgcctgattg
    52801 ggtataatca gggtaaatct tattttattt caaaagatta atatttgctt tccatttttc
    52861 cttgacggta tcggaaaagt tgattatagt tacagcttcc ttaggagtaa tggctgagag
    52921 gctgaaggca cttccctgct aaggaagcat gtggggtcaa cctgcatcga gggttcgaat
    52981 ccctcttact ccgccagata aaaaatagac gctgtgtttt acagcgtcta ttttttttat
    53041 gcaattttat agcgggttgg tgcaaaacca gtatggtatt gccctgtctt gattctgaat
    53101 tttgttatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc tcaaagagaa
    53161 cgattctcta aggtgctgga gcaccaagtg aatcggctcc gtactatttg tactgtctgc
    53221 ggcttcgtcg ccttgtcctg atttttgtta atccactata atccgagatg cttgccgttt
    53281 atttcagcct cgttcaaacg gcggctctga tttgcgtggt ttctgtttgc cgtattcgcc
    53341 tatccgtacc gcaaatgtta tactgggaaa aatttactga ttgtgtttta tggcatattt
    53401 gccgatagga tggaagagac aaatgagcag aatccggcag gcttttgccg ctttggatgg
    53461 cggaaaggca ttgattccct atattacggt gggcgacccc gatattcgga caactttggc
    53521 attgatgcac ggcatggttg caaacggtgc ggatattttg gagttgggcg tgccgttttc
    53581 cgatccgatg gcggatgggc cggttattca gcgtgcggcg gagcgggcgt tggcaaacgg
    53641 gatttcgctg cgcgatgtct tggatgtcgt cagaaaattc cgtgaaaccg acacgcaaac
    53701 gccggttgtt ttgatgggat atttgaaccc tgtacataag atgggttatc gggagtttgc
    53761 tcaggaagcc gcaaaggcgg gtgtggacgg cgtgttgacg gtggattccc ctgtcgaaac
    53821 catcgatccg ctctatcgcg agctgaagga taacggggtc gactgtattt tcctgattgc
    53881 gccgacgacg acggaagacc gtattaaaac cattgccgag ctggcaggcg gatttgtcta
    53941 ttatgtttcg ctcaagggcg taacgggcgc ggcaagtttg gatacggatg aggtttcgcg
    54001 taaaatagag tatttgcatc agtatatcga tattcccatc ggtgtcggtt tcggcatcag
    54061 caatgcggaa agcgcgcgca aaatcggccg ggttgccgac gcggtcattg tcggcagccg
    54121 gattgtgaaa gagattgaaa acaatgcggg caacgaggct gcggccgtcg gtgctttggt
    54181 caaagagttg aaggatgccg tgcgctgatt ctgtcacgca ttctaaatat tttaggagtt
    54241 gtccatgagc tggttagata aaatcctgcc acccaaaatc aaaaaccgca gcaaagacgg
    54301 ttcttccaat gttcccgagg gtttgtggca caaatgtccg tcttgttcgg caaccgttta
    54361 ttcgaccgag ttgcagcaga acaatcaggt ttgtccgaaa tgcaaccacc acaatccgtt
    54421 gtcggcacga caacgcctga atctgctttt ggatgaggat ggcagagagg aggttgccgg
    54481 aaatgtcaaa ccgacagatc ctttgaagtt taaagacggc aaaaaatatc cggatcgttt
    54541 gagtgcggca cgcaagctga ccggggaaga tgatgctttg gtggtaatga aaggcaagat
    54601 gaacggtctg cccgttgtgg ttgctgcgtt tgagttccgc tttatcggcg gttcgatggg
    54661 ttcggttgtg ggcgaacgat tcgtacaagg tatccgtcgg gcggttgccg acaattgtcc
    54721 gttcgtctgt gtggcggctt ccggcggtgc gcgtatgcag gagggtgtga actcgttgat
    54781 gcagatgacg aaaaccagtg ccgcgctgca tttgctgacg gaaaaacgcc tgccgtttat
    54841 atcggtattg accgatccga ctatgggcgg cgtatccgcc agcttcgcat ttttgggcga
    54901 tgtcgtgctt gccgaaccca atgcattaat cggctttgcc ggtccgcgcg tgattgagca
    54961 gacggtgcgc gaaacgctgc cggaaggctt ccagcgtgcc gagtttttgc tggaaaaagg
    55021 cgcaatcgac cagattgtcg accgccgcga tatgaagcgg cgcatcagtg atttgattac
    55081 gctgttgtgc cgtcaggaca aagtttccgc cgcttgatgg ctgatgaatc gaataccgtc
    55141 tgaaaccgat gtttcagacg gtatttttgt gtctggttat ttgttgtgcg gctttatcga
    55201 cggggcatag cgtccggcac gttctttcag gcgttttcgt gtcggcgggt acaccgccct
    55261 cgcagaatgc ctgatacagg acggtgcgca gtgcgtcgtt gcggcttaat gtaccgccta
    55321 tcggtttcca ttcggcgttt cggggctgta tccagcggcg gttgaccgtg tcgccgtagc
    55381 cgaacacttt ataggaggaa ggtttgccgt tgccgaacct gatggagaag cgggcgcaga
    55441 atatgccttc ggcagtcagg ttgtcgtagc ctttgtcgga gcggatattg agaatgtagc
    55501 ggatgctgcc gtcgggcgcg ggcataattt gcaggctgtc gagcaggatt ttcggctgtt
    55561 tgccgtaatt ttcatccaca taaatgtcaa accagccgtc cgagtgcgta tcgggcagcg
    55621 gcggcagttt ggcggtatgt tctttaaatt cgcgggcggc ggcttcttcg ggcgtttcgc
    55681 ggtagcgggt gttgatcggc gtgtcttttt ggttgaagcc ggcagcaagg gacgtgccgg
    55741 cggtgagtgc gagcagcagg agggcggtgc ggcgcataag tttctccaaa ttgaaaacgg
    55801 cgttatttta tgggttggca aagggggctg caagcaactg gggtataatc tccccccgat
    55861 tcccattttt taaacggtac aaacgatgaa cagcgaaact ttagacgtaa ccggattgaa
    55921 atgtcccctg ccgattttgc gggcgaaaaa ggctttggcg caaatgcagc agggcgacgt
    55981 gttgaccgtt ctggcaaccg acggcggcgc accgggggat tttgaggctt tttgccgcca
    56041 aaccggtcat gtgctgttgg atgcttccga acaggacggc gtgttcacgc tggtcgtcaa
    56101 gcacaaataa atgccgtctg aaatgcggat gtcccgcccg acggcgttgt ttttgaatat
    56161 cgtatgtgcc gcgtgccgtt tcaaaaacaa accgtccggc gtgcagtgtc ggcatttcgg
    56221 gcgtatcgcc gccgatttgt tccggaatgg ctgttaaccg ccttgccgtc ggcaaagaag
    56281 caaaacccaa gcacaatcaa aatctaaagg ctgtgtttga agattccgtt gatgcaaccc
    56341 aatcagtcgg acaaaatgcc tttcatccaa tggaaccggt ttccgaccgg acggaataac
    56401 cggctttccc ccggcaaacg gatggaatcg accgggtatt caaacgcagc caaaacctaa
    56461 aaaggaacaa ccatgcaaac cctgaccatt atccgccccg acgatatgca cctgcacctg
    56521 cgcgacggcg acgcgctcaa agccgttgcc ccttataccg cccgccaaat ggggcgcgcc
    56581 gtcattatgc ccaacctcaa accgcccgtc gtcagtgtag ccgacgcgct tgcctacaaa
    56641 gcgcgcatta tggcggtgtt gcccgaaggc agcgcgtttg agccgctgat gacgctttac
    56701 ctgaccgacc aagccacgcc cgagctggtg cgcgaagcca aagccgccgg catcgtcgcc
    56761 ttcaaactct accccgccgg cgcgacgacc aattccgatt ccggcgtaac cgacctattc
    56821 aagctcatcc ccgtgttgga agaaatggca aaacaggaca tcctgttcct cgttcacggc
    56881 gaagtaaccg accccgaaat cgacattttc gaccgcgaag ccgcctttat cgagcgcgtg
    56941 atgaaacccg ttttggcgca agtgccgaat cttaaagtcg tgtttgaaca cattaccacc
    57001 gccgaagccg cccgcctggt tttggaagca ggcgacaacg ttgccgcctc tgtgaccccg
    57061 caacacctcc tgctcaaccg caacgacctc ttggtcggcg gcgtgcgccc ccatcatttc
    57121 tgcctgcccg tcctcaagcg cgaaacccac cgtcaggcat tggttgccgc cgttaccggc
    57181 gagaaggcgc acaaattctt cctcggcaca gattccgcgc cgcacgccaa atccgctaaa
    57241 gaaaacgcct gcggttgcgc cggtatgttc agcgcgatga ccgccatcga gctttacgcc
    57301 gaagtgtttg aaaaagcagg cgcgttggac aaactcgaag cctttgcctc gaaaaacggc
    57361 gcaaggtttt acggcattcc ggaaaacgcc ggcacgatca ccctcgtcaa acaaagccaa
    57421 accgtccccg caagtgttcc ctacggcgac ggcgaacttg tcccgatgcg cgcgggcggc
    57481 gaaatcggct ggacggtaca gtattgattg aacggtcaag caaaatgccg tctgaaaggt
    57541 ttttcagacg gcatttgtgt tgttgactga ttgatacgtc aacggcgttt gagtttgtta
    57601 cgtttcggtt atttccgata aattcccaca attttcaaat ttcgccattc ccacgaaggc
    57661 aggaatccgg aaattcgatg cgaccagagt ttatcaaaaa cggcagcaac tcaaaaaacc
    57721 ggattcccgc ctgcgcggga atgacgagat tgaagtttca gaatttattt gaaataccca
    57781 aaattcaaaa aaccaaattc ccacatgcgt gggaatgacg aaacaaagaa agcagaaata
    57841 aggacataga actttcttta aatttgtgat gcatcaacgg cgtttgggct cgtcggggcg
    57901 gatttgggca gcgagtttgt cgaggatgcc gttgacgaat ttgtgcccgt ccgtgccgcc
    57961 gaaggttttg gtaacttcga tggcttcgtt gatgatgacg gggtagggcg tttcgggcat
    58021 ggcggacagc tcgtggcagg cggtcagcag gacggcgcgt tcgatggggt tgaggtcttt
    58081 ttcgtccctg tcgagcagcg ggcggatttg ttggatgtac tctgccgcat tggtttgcgt
    58141 gccgaagaaa agtttgttga acaattcttc gtctgccttg gcaaagtcgg acatttcgcg
    58201 gatgttttta gcaatctcgg gcgcggcggt gcggttgata agggattggt aaacggcttg
    58261 tacggcaagc tcgcgggaac ggcggcgggc tgttttcatg atttttcctt gaaacggttg
    58321 ggcggcacgg tatgccgtct gaaacggaaa gggcgtatcg gtgtacgccc tgtttgttat
    58381 tcttcgtctt caaactgttc ttcgagcagc aggttgacga ggttggcgca ttctacggcg
    58441 actttggcgg catccgaggc tttttcttca atccgttcga ttgcctgcgc gtcgttttcg
    58501 gtggtcagga cggcattggc aatcggaatg ttgtagtcga gtgcgacgcg gctgacccct
    58561 gctccggatt cgttggaaac cagctcgaaa tggtaggttt cgccacggat gacgacgccg
    58621 atggcaatca gtgcgtcaaa cttttcggaa gaggcaaggt tcatcagcgc gatggggatt
    58681 tcaagcgcgc cgggtacggt ggcgacggta atgttttcgt ctgccacgcc caattcttgg
    58741 agggtgcggc agcagacttt gagcatttcg ctgccgattt cgttggtgaa acgtgcctgt
    58801 acgatgccga tgcggaggtg tttgccgtca aggttggggg cgatggtgtt cattgggtgt
    58861 cctttggtat tcggggtttc ggaatgccgt ctgaaggttt cagtcttgcg gttgccagtc
    58921 ggcgacggtt tggaatgtgc cgtcttctgc caattcccac gcgctgcctt caggttggga
    58981 aagcagtacg gcggtttcag ggttggtttt ggcgatgtcg gcgaggctga cgatgctgaa
    59041 gttgtcggga tcgtcggtgt attcgtcggt ctcgtcgccg ctgaagaaac gccagccgct
    59101 gtcgttttca aaaacggggg cttcgcggta gaggaagccg acgggccggt tttgtttggc
    59161 gacggtgttg gtggcgatac agcggtcgag tgccgaggaa agtgcttgtg caaatgcgtt
    59221 cattacggga atacgttggg ggaaaactta cggattttac cacgattcgt gcgttgtcgg
    59281 cagacggcgg cggtttggtg gtacaatgtg cgccgtttgc agccttaagg tgtttctgta
    59341 tttttggagt atggaaacgc attcgggctg ttttttgcgg aagacggtaa tgaaagacga
    59401 tgttttgaaa cagcaggcac acgcggcgat acagaagaaa ctgggctacg cgttccgcga
    59461 tatttcgctt ttgcggcagg ctttgacgca caggagccat catgcgaagc acaacgagcg
    59521 gttcgagttt gtcggtgatt cgattttgaa ttatacggtg gcgcggatgc tgtttgacgc
    59581 gtttccgaag ttgaccgagg gcgagttgtc gcggttgcgg gcaagtctgg tcaatgaggg
    59641 cgtgctggcg gaaatggcgg cggaaatgaa tgtcggcgac ggcctgtact tgggggcggg
    59701 cgagttgaag agcggcggct tcagacggcc ttcgatactg gcagacgcga tggaggcgat
    59761 gtttgctgcc gtcagcttcg atgccgattt caacacggcg gaaaaggtgg tgcgccattt
    59821 gtttgccgat cgcgtccggc gcgccgattt tcaaaatcag gcaaaagacg gcaaaactgc
    59881 tttgcaggag gcgttgcagg cgcgccgttt cgccttgccg aaataccgta tcgaagagca
    59941 aatcggttat gccaacgaca gtatgtttgt catttcctgc gatttgggcg aactgggttt
    60001 cgtgtgccgt gccaaaggga cgagccgcaa ggcggcggag caggaagcgg cgaaagaggc
    60061 tttgaaatgg ctggaagaga agctgccgct gaagaggaaa aagaaatgag gcggcgcgtg
    60121 aatatgccgt ctgaacatat ggatacgaaa gcaaatatgg atattgaaac cttccttgca
    60181 ggggaacgcg ccgccggcgg ataccgttgc ggcttcgtag cgattgtcgg ccgtccgaac
    60241 gtgggcaaat caacgctgat gaaccatctc atcggtcaga aaatcagcat caccagcaaa
    60301 aaggcgcaga cgacgcgcaa ccgcgtaacg gggatttata ccgacgatac cgcgcagttc
    60361 gtgtttgtcg atacgcccgg ttttcaaacc gaccaccgca acgcgctcaa cgacaggctg
    60421 aatcaaaacg ttaccgaggc actcggcggc gtggatgccg tggttttcgt cgtggaggcg
    60481 atgcgcttta ccgatgccga ccgcgtcgtg ttgaaacaac tgcccaagca cacgccggtc
    60541 attttagtgg tcaacaaaat cgacaaggac aaggcgaaag accgttacgc gctggaggcg
    60601 tttgttgccc aagtgcgcgc cgaatttgaa tttgcggcgg cggaggcagt cagtgcgaaa
    60661 cacggattgc ggattgccaa cctgttggag ctgattaagc cgtatctgcc cgaaagcgtg
    60721 ccgatgtatc ccgaagatat ggttacagac aaatcggcgc gttttttagc gatggaaatc
    60781 gtgcgtgaaa aattgttccg ctatttgggc gaggaattgc cttatgcgat gaatgtcgaa
    60841 gtggagcagt ttgaagagga agacggtttg aaccgcatct atatcgccgt tttggtcgat
    60901 aaggaaagcc aaaaggcaat tttaatcggc aaaggcgggg agcgtttgaa gaaaatttcc
    60961 accgaagcgc ggttggatat ggaaaaactg tttgatacca aagtattttt gaaggtctgg
    61021 gtcaaagtca aatccggttg ggcggacgac atccgcttcc tgcgcgagct gggtttgtag
    61081 tttttcttgc tgaactttac gcaaatgccg tccgaacagg tttcagacgg cattttgttt
    61141 caatcgggaa tatctttgtt aaaaacgggt tgatattatc tgtgca
//
LOCUS       DAWGBY010000003        44097 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.003, whole genome shotgun sequence.
ACCESSION   DAWGBY010000003 DAWGBY010000000
VERSION     DAWGBY010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 44097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44097
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.003"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            157..1341
                     /gene="coaBC"
                     /locus_tag="WHG62_000153"
     CDS             157..1341
                     /gene="coaBC"
                     /locus_tag="WHG62_000153"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ1724332.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRCITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAGYL
                     NK"
     gene            complement(1408..3564)
                     /locus_tag="WHG62_000154"
     CDS             complement(1408..3564)
                     /locus_tag="WHG62_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ1724333.1"
                     /translation="MPVPQPTAPYDPLTAEARTLLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLAVWHMDVQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKMVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3657..3863)
                     /locus_tag="WHG62_000155"
     CDS             complement(3657..3863)
                     /locus_tag="WHG62_000155"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ1724334.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDARNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3922..4539)
                     /gene="gmk"
                     /locus_tag="WHG62_000156"
     CDS             complement(3922..4539)
                     /gene="gmk"
                     /locus_tag="WHG62_000156"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ1724335.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4667..5266
                     /locus_tag="WHG62_000157"
     CDS             4667..5266
                     /locus_tag="WHG62_000157"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ1724336.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5312..6100)
                     /locus_tag="WHG62_000158"
     CDS             complement(5312..6100)
                     /locus_tag="WHG62_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ1724337.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKIAVEALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPP
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAVKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6425..7780
                     /gene="yegQ"
                     /locus_tag="WHG62_000159"
     CDS             6425..7780
                     /gene="yegQ"
                     /locus_tag="WHG62_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ1724338.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHDRNKKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLTGHSTAKQSQYVGHVTEIDKNGWATIEVKNR
                     FAVGDSLEIIHPSGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMRGKEKALIARVLN
                     P"
     gene            7914..8390
                     /locus_tag="WHG62_000160"
     CDS             7914..8390
                     /locus_tag="WHG62_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ1724339.1"
                     /translation="MLAACQSGSAPKNAHTASPGTPAGESCKVIRGDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPIANGRNLVTRQAANGVGKSDSEACERA
                     LINAARKFQQTAGKLGGRRVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
     gene            complement(8642..8983)
                     /locus_tag="WHG62_000161"
     CDS             complement(8642..8983)
                     /locus_tag="WHG62_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ1724340.1"
                     /translation="MPQVKLVITRPAQSDLVRIYNFLNDLGAEHQANTVMRLLKNSFV
                     STQGSPGNGKPYDLSVAGETLQNVREVIVPYGKSGYSYLFWHDKSDRQILILTVRHFR
                     ENAYRLNFPFL"
     gene            complement(8971..9258)
                     /locus_tag="WHG62_000162"
     CDS             complement(8971..9258)
                     /locus_tag="WHG62_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724341.1"
                     /translation="MMLTNQEVTGVKLGYRKAVLQELARDFGGSVHSIVLDAVDGHIE
                     RLKAKQAYDKRAMQAFQDYQETGLHITLNEFADWVDGLGGDEPKDMPECRK"
     gene            9328..9450
                     /locus_tag="WHG62_000163"
                     /pseudo
     CDS             9328..9450
                     /locus_tag="WHG62_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
     gene            complement(9640..10575)
                     /locus_tag="WHG62_000164"
                     /pseudo
     CDS             complement(9640..10575)
                     /locus_tag="WHG62_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714352.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            complement(11233..11529)
                     /locus_tag="WHG62_000165"
                     /pseudo
     CDS             complement(11233..11529)
                     /locus_tag="WHG62_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253104.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            complement(11660..12289)
                     /locus_tag="WHG62_000166"
     CDS             complement(11660..12289)
                     /locus_tag="WHG62_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ1724342.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKELPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALGLSPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            12639..14099
                     /locus_tag="WHG62_000167"
     CDS             12639..14099
                     /locus_tag="WHG62_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ1724343.1"
                     /translation="MGSAVGGQPLEKIFLPDTKGLFILPNLPVLHPDWVYRLFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPRLDRGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKRVYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     SARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
     gene            14092..15753
                     /gene="pqiB"
                     /locus_tag="WHG62_000168"
     CDS             14092..15753
                     /gene="pqiB"
                     /locus_tag="WHG62_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ1724344.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTLLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN
                     GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            15753..16271
                     /locus_tag="WHG62_000169"
     CDS             15753..16271
                     /locus_tag="WHG62_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ1724345.1"
                     /translation="MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            16275..16826
                     /locus_tag="WHG62_000170"
     CDS             16275..16826
                     /locus_tag="WHG62_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ1724346.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLNWTLMLKKRQAFQTAFEGFDIDTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDTHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRNTLKYHPKWLDAV"
     gene            16816..17457
                     /locus_tag="WHG62_000171"
     CDS             16816..17457
                     /locus_tag="WHG62_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ1724347.1"
                     /translation="MPSEKPMNRRIFLLGAGALLLTACGKKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEAYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(17450..17680)
                     /locus_tag="WHG62_000172"
     CDS             complement(17450..17680)
                     /locus_tag="WHG62_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ1724348.1"
                     /translation="MISACPGFIHSRLGRSVMPSEPAGRLFQKTPYRCNFMRLYGVGF
                     ALQTAYASRSSLVSQSVHDYINNLGADKPLFI"
     gene            17628..17987
                     /locus_tag="WHG62_000173"
     CDS             17628..17987
                     /locus_tag="WHG62_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724349.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNIVFPLPAYPLAWLVPAGFMVLGGGFPLSLPLVALLVLTCCILAHCPPLS
                     RLLCYPCPNHPMSKNSA"
     gene            18018..20870
                     /gene="gcvP"
                     /locus_tag="WHG62_000174"
     CDS             18018..20870
                     /gene="gcvP"
                     /locus_tag="WHG62_000174"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ1724350.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVGDFAKADEGEYFGALFQYVGKDG
                     DVQDLQSVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHEVFFDTVTVDFGSK
                     EKADQVFAVALESGYNLRRVSDTQIAAAFHETSVREDLTDLYRAFTGKDTFAFADDVK
                     GRLNAELLRQDDILQHPVFNSYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPETQTAGYRELLTDMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEANGEGHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKSIRREVQKVIDGEWPKDDNPLVNAPHTAADITGNWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(21332..22171)
                     /locus_tag="WHG62_000175"
     CDS             complement(21332..22171)
                     /locus_tag="WHG62_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ1724351.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            22456..22531
                     /locus_tag="WHG62_000176"
     tRNA            22456..22531
                     /locus_tag="WHG62_000176"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22489..22491,aa:Arg,seq:ccg)
     gene            complement(22596..23789)
                     /locus_tag="WHG62_000177"
     CDS             complement(22596..23789)
                     /locus_tag="WHG62_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ1724352.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPAAVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(23810..24898)
                     /gene="trmA"
                     /locus_tag="WHG62_000178"
     CDS             complement(23810..24898)
                     /gene="trmA"
                     /locus_tag="WHG62_000178"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ1724353.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFEAASEAVNRLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKRLDDEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANRIGNIKIARLSAEEFTEAYTGKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            25041..26141
                     /gene="aroC"
                     /locus_tag="WHG62_000179"
     CDS             25041..26141
                     /gene="aroC"
                     /locus_tag="WHG62_000179"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ1724354.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLALTESDIQAD
                     LDRRKPGTSRHVTQRREADQIEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            26233..26658
                     /locus_tag="WHG62_000180"
     CDS             26233..26658
                     /locus_tag="WHG62_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ1724355.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAVAETPSVEAEAAESSAAE"
     gene            complement(26732..28717)
                     /gene="parE"
                     /locus_tag="WHG62_000181"
     CDS             complement(26732..28717)
                     /gene="parE"
                     /locus_tag="WHG62_000181"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ1724356.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVHDNGRGIPVGLHPEEGVSVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPIFSCENYISDDHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVAGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(28784..29308)
                     /locus_tag="WHG62_000182"
     CDS             complement(28784..29308)
                     /locus_tag="WHG62_000182"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ1724357.1"
                     /translation="MLDREGYRPNVGIILTNNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIEFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQPSGNR"
     gene            29474..30769
                     /gene="serS"
                     /locus_tag="WHG62_000183"
     CDS             29474..30769
                     /gene="serS"
                     /locus_tag="WHG62_000183"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ1724358.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(30847..31845)
                     /locus_tag="WHG62_000184"
     CDS             complement(30847..31845)
                     /locus_tag="WHG62_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ1724359.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEAEKIGGRYVELNELYARSDIITLHCPSTPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSSAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQIGDCGNAVRADG"
     gene            complement(31970..33046)
                     /gene="prfA"
                     /locus_tag="WHG62_000185"
     CDS             complement(31970..33046)
                     /gene="prfA"
                     /locus_tag="WHG62_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ1724360.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITNALIAEHQAELLAAMGD"
     gene            complement(33150..33929)
                     /locus_tag="WHG62_000186"
     CDS             complement(33150..33929)
                     /locus_tag="WHG62_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ1724361.1"
                     /translation="MNFTDTHCHLADAALRENLPHILTAAREAGVGRFIVPATRPQDW
                     QDVADLAQRLSENPLWGNIHIALGIHPWFSDDVSEPDFQLLEQTLKAHPTAWVGEIGL
                     DFYDKTQTPPQRERQIQVFVRQLEIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGI
                     VHAFSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLK
                     KEINTPANIPGIAKIAAEIRGTCVEEIAKVTERNADALLGR"
     gene            complement(34044..35033)
                     /locus_tag="WHG62_000187"
     CDS             complement(34044..35033)
                     /locus_tag="WHG62_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ1724362.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGVIAEWDETQGWYNLRIPSQDAAAVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSQGWGKEEVEKELARLKL"
     gene            complement(35100..35783)
                     /locus_tag="WHG62_000188"
     CDS             complement(35100..35783)
                     /locus_tag="WHG62_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ1724363.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(35972..37306)
                     /gene="glmM"
                     /locus_tag="WHG62_000189"
     CDS             complement(35972..37306)
                     /gene="glmM"
                     /locus_tag="WHG62_000189"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ1724364.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQILNQDLATVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWAHEGAERIASAIGSL"
     gene            complement(37436..38287)
                     /gene="folP"
                     /locus_tag="WHG62_000190"
     CDS             complement(37436..38287)
                     /gene="folP"
                     /locus_tag="WHG62_000190"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ1724365.1"
                     /translation="MVGCVWQAGRFEIGLDKPKIMGIVNLTPDSLSDGGVYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSPEEEWARVEPVLAEVAGWGVPVSLDTRR
                     TVVMKKALALGGIDIINDVAALTDEGALELLARQTDTGICLMHMQGLPKNMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGL
                     PLLIGVSRKSMIGELTGEADAAARVHGSVAAALASVARGAQIVRVHDVKATADALKAW
                     EALGINL"
     gene            38562..40664
                     /locus_tag="WHG62_000191"
     CDS             38562..40664
                     /locus_tag="WHG62_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ1724366.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDRTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQQQLILKEISLNLQSPDSSGQQFESSGILVWRKLSVPWKSRGLFLSDGIGTPEISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALK
                     NNSIKTGTVNGTFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRLQTNF
                     SLGSPLVWSRDNGLDAPRLHISTLQDTVNRLPQPRFISRLDGSLSIPNLQNWNAELNG
                     TFDRQPVAAKFKYTREGAPRLEAAAALQKLNPAPYLDEFRQQNGKIFPDILGRLSGNV
                     EAHLKIGSIQLPGLQLDDMETYLHADKDHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGENRKQLIRSLQGSLSLNISN
                     GAWHGIDMDSILKNGLSGKISGSTPFYRFTLNSEISDGISRHIDTELFSDSLYVTSNG
                     YTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRKEKQK
                     ILEDTLLEQWQWLKPKEP"
     gene            complement(40728..42206)
                     /gene="ubiD"
                     /locus_tag="WHG62_000192"
     CDS             complement(40728..42206)
                     /gene="ubiD"
                     /locus_tag="WHG62_000192"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ1724367.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMTGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATSKWPGETDREWGRVIKKDPAVTVKIDGIWGKLGL"
     gene            complement(42226..42741)
                     /locus_tag="WHG62_000193"
     CDS             complement(42226..42741)
                     /locus_tag="WHG62_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ1724368.1"
                     /translation="MHTCTSCGEKHEDMPATGFTAPYPYNQLSEEERIAYQAECDSDF
                     CIIRYSDQTDRFIRAALPIPIIGHEETLEYGVWVSVSEKSFNDYQSRFYDNSENAVYF
                     GMICNRLPPYESDTFGLHCNVVTQPDGQRPLLQLHQSGGHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(42748..43248)
                     /locus_tag="WHG62_000194"
     CDS             complement(42748..43248)
                     /locus_tag="WHG62_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724369.1"
                     /translation="MVFVNPLYYGREAGWFVWLAAAMCGLWLLRALTAKLPQQRYAAL
                     FITLFFAAVLVFGRRDSMYWYPVLVNLMMLAVFGSSLFAGQTVIEKLARLQQPDLPEK
                     AVRYTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYR
                     KLVLKV"
     gene            complement(43480..44049)
                     /locus_tag="WHG62_000195"
                     /pseudo
     CDS             complement(43480..44049)
                     /locus_tag="WHG62_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
BASE COUNT        10307 a        12317 c        11061 g        10412 t
ORIGIN      
        1 cctttcctct ccctcctccg gctggtgcgc ctttgtgaat atgccgtctg aaactcgggg
       61 actcagacgg cattttgtat ccaaacggta actaatgtat ccgcactttg ttatagaatg
      121 gctgctgttt tttcttcgta attagaaatt gtcaaaatgg gtaaacatat tcttttaggt
      181 gtaacgggca gtattgcggc gtataagtct tgcgagttgg ttcgtctgct gaaaaaacag
      241 gggcattcgg ttacggtggt tatgagccgc tcggcaactg aatttgtttc tccgctgact
      301 tttcaggctt taagcggcaa tcctgtcctg accgacacgc acggcggcaa cggttcaaac
      361 ggtatggaac atatcaacct gacccggaat gcggatgttt ttctgattgc gccggcaagt
      421 atgaataccg tggcaaaaat ctgtaacggc gtggcagata acctactgac cagtctggca
      481 gccgcacgga aatgtccgct cgccatcgct cccgcgatga atgtggaaat gtggctcaac
      541 cctgccaacc aacggaatat cgcacaactg gtttcagacg gcattactgt ctatatgccg
      601 ggcttgggcg aacaggcttg cggagaaaat ggtatgggaa ggatgccgga acctgccgaa
      661 ttgctggatt tgcttccgga cttgtggaca ccgaaaattt taaggggcaa gaaaatcttg
      721 attaccgcag gtgcgacatt tgaagccatt gaccctgtca ggtgcatcac aaatacctcc
      781 agcggaaaaa tgggggtagc tttggcgcgg gcgtgccgtg ccgccggtgc ggaagtcagc
      841 ctgattcacg gacagcttca aaccgcgctg cctttcggca tatccgatac ggttcaagcc
      901 gtcagcgctg aagatatgca tcgcgcagtg catcgtttga ttgaaaaaca agatgctttt
      961 atttctgttg ccgccgtctc agactataag gttaaaaaca agagtacgca aaaattcaaa
     1021 aaagataaaa atgccaaacc gttatccatc gaattggatg agaaccccga tattttggct
     1081 tctattgcct cattgccgaa cccgccgttc tgcatcggtt ttgccgctga aacggagaat
     1141 gtaatggcat atgcacgaga aaaacgtatt aagaaaaaaa taccggtgat agttgccaat
     1201 gatgtttcaa tcgcgatggg caaaccgacc aaccggatta ccattatcgg ggacgacggg
     1261 gaactatctt ttcccgaaac aagtaaagat gaagcggcga tgcagattgt tgaaaggctt
     1321 gccggatatt tgaacaaata agcaattgaa cggataaacc ataaagcggg ttgcctgtta
     1381 atcaaaaggc aacccgtttt acctgcttca acttctgatg actttgcgga tatatggaat
     1441 actatgcaga ttttgaataa tctgattcaa ttgattcaga ttcttgactt tcaataagaa
     1501 tttgaattcg acaaaacctt ccgttcccga ctgggattta gacggtgttt cgaccgactc
     1561 aatgtccgca ccggaatcgg aaatcgcttg cgccattaat gccaacaggc cgtggctgtc
     1621 ttccgattgg acttgaagcc cgacacggta gttctgcccg ttcatatttt cccagtctgc
     1681 atccagctgc tgttcgggat cggacttcaa caacgtcggg caggtatctc tgtggataat
     1741 catgcctttt cccttaacca acagcaaacg gatggaatca ccaggaacag ggtggcagca
     1801 ctctgcaaaa tgaatatgcc cgctttcctg accatcaact ttaatggaac tgagcctgac
     1861 ctcgctgccg aaatgctccc ctgccaactc ggcaatgtgc atggcgacat aaacaggcag
     1921 ggtatgcccc ataccgacgt tgtacagcac ttcctcaaat gaagtctgtt tgtcgttgag
     1981 atcggcaagg tatttttctt tgatgccgtc tgaaagcagg acatctttgg gcagcaaact
     2041 ggacagggct ttttgtaaga ggctctctcc caaaacgacc gcatcgtgcc ggttaaggtt
     2101 tttaatatat tggcgtatgg cactgcgcgc cctgcctgac acggcgaaat tcaaccatgc
     2161 aggattgggt ttggcatgtt cggatgtaat aatttcgacg gaatcgccgg ttttgagctt
     2221 cgtacgcaac ggcatcatga tattgttgat acgtgcggca acggttttgt gcccgatatc
     2281 ggtatgcacc gcataagcaa aatcgacagg cgttgcccct ttgggcaaag ttaggatttt
     2341 tccttttggc gtaaggatgt agatttcgtt cggaaacaaa tcgactttga cgtgttcgag
     2401 aaactcaatg gcattggcac tgcttgcctg caaatctaag atatttttca gccaccggtt
     2461 tgtgtgaagc accgcctgat cgaccatctt agaatatgat ttatagctcc aatgtccggc
     2521 gattccacct tcggcaacag catccatttc cttggtacgt atctgaactt caatcggcaa
     2581 gccgtaaggg ccgaccaaag tcgtatgcag actttgatac ccgttgcttt tcggaatggc
     2641 gatatagtct ttgaaccgcc cgggcttggg ctgatagagg gtgtgcaatg cgccgagtgc
     2701 ggcataacag gctggaatgc tgttgacaat gacgcggaaa ccgtaaatat ccataacctc
     2761 ggcaaagcgc agctttttcg ccatcatttt ctgatggatg ccgtacaggt ttttttccct
     2821 gcctttgatt ttggcctcta tattcgcgcc taccagccgc tggccgaatg cgcgcaagac
     2881 tttgccgaca acgtcctgcc ggttcttccg gctcttgtcc atcgcttttt ttaaagtctc
     2941 gtagcggttg ggatgcaggt tttggaacga taaatcctga agctcttgat atgcgttatt
     3001 caaacctata cggttggcaa tctgtgcata gatttcaagg gtttcccttg caatccggcg
     3061 gcgtttgtcc gggcgcatcg aaccgagcgt ccgcatattg tgcaggcggt cggcaagttt
     3121 gacgacgatg acgcgcacat ctttggtcat cgccaaaatc agtttgcgga aactctccgc
     3181 ctgatgttcc gcatgatctt caaatttgag tttttcgagt ttggacagcc cgtccaccat
     3241 ctcggcaatc gtattgccga acaccgccgc catttcccct tttgtcacgc ccgtatcttc
     3301 caatacgtcg tgcattacac ctgcacaaag accctgtacg tccatatgcc aaaccgcaag
     3361 ctgtgtcgca acggcaatcg gatgcgtaat gtatggttcg ccacttttgc gggtttgccc
     3421 gtcgtgggcg cgaaacgcat aggcgacggc tttttcaagc tccgcctgtt cctcgggctt
     3481 gaggtaggag gctgtatgga aaagcagggt acgcgcttcg gcggtcagag ggtcgtaagg
     3541 tgcggtgggt tgagggacag gcatttcaga cggctttcgg aacatatttt atttttcgtt
     3601 tcaaaccgtc ggactgcacg gcggcagaat gtgccgacgt gcgtttccgg cagaatttat
     3661 ttattgcgcg tcaacagttc cgtaccgata tgcccggcgg cgatttccct taaggcggta
     3721 acggtcggtt tgttattgcg ggcatcgtcc acaagcggcg tgttgccgtt ctcaagctgg
     3781 cgggcgcggc gagccgctac caatgtcagg tcaaaatggt tggaaatttt tccggtacag
     3841 tcttcggtgg taatacgtgc catattattt gctttctttc aaaaatattt aaattgggaa
     3901 accgagtatt ttcgcggttt tttaggaatt ttccaacaaa tctgcaataa accccagttg
     3961 ccgcgacctt ttcagacggc aggcattcac aatatggcgc aaatcctcct ccgctcgcgc
     4021 caagtcgtca ttgaccacga caaagtcaaa caatacggac tgctcgattt catgccttgc
     4081 cttcgacagc ctcctttgga taacttcccg actgtccgtc ccgcgtccgt tcagacgtgc
     4141 agcaagcaca tcgaaagacg gcggcaggat aaagatgccg acggcttccg gcagcgcgtt
     4201 gcgaacctgc gccgcgccct gaacgtcgat ttccaaaatt acgtcatagc ctgccgccgc
     4261 caaagcattc acgccctccg cgcttgtgcc gtaatagttg ccgaacacgt ctgcgtattc
     4321 caaaaaagct tcctgcgcga taagcgactc aaactcttct ttagaaacaa aatgataatg
     4381 tacgccgttt acttcgcctt cacgcggcgg acgcgtcgtg tgcgatacgg aaacgcgcaa
     4441 accgttatgg tttgccaaca gccgcgacac cagcgtggtt ttgcccgtgc cggaagcggc
     4501 cgaaatgata aagatgttgc cttttcgata agcggacata ttttttacct gtatattttc
     4561 cagccgattg tatcacaatg gacacccagt ttcctatttg ccgatgccca tattttgccg
     4621 ctattgtttt gattgatttg gcaagcggca ggctgacggc tacaatatgg cgttaaaaac
     4681 atcaaacttg gaacacgcaa tgctggttca tcccgaagct atgagtgtcg gcgcgcttgc
     4741 cgacaaaatc cgcaaaatcg aaaactggcc gcaaaaaggc atcttattcc acgacatcac
     4801 gcccgtcctg caaagtgcgg aatacttccg ccttttagtt gatttattgg tttaccgcta
     4861 tatggatcag aaaatcgaca tcgttgccgg tttggacgcg cgcggcttca ttatcggcgc
     4921 ggcactcgcc taccatctca acgtcggttt tgtccccatc cgcaaaaaag gcaagctgcc
     4981 ttttgaaacc gtatcgcaaa gctacgcgct cgaatacggg gaagctgcgg tggaaatcca
     5041 caccgatgcc gtcaaacccg gttcgcgcgt gctgctggtc gatgatttgg ttgccacggg
     5101 cggcacaatg cttgccgggc tggaactgat ccgcaaactc ggcggagaaa ttgtcgaagc
     5161 cgccgccatt ttggaattta ccgaccttca aggcggcaag aatatccgtg caagcggcgc
     5221 gcccttattt accctgcttc aaaacgaagg ctgtatgaag ggctgaaaac cgaccctgcc
     5281 gtctgaaacc ggcagggttg ttatgatgcg ttcaaatcac gcccaaatct tgcaagcccc
     5341 tcaacacgcc gtcttcatca acgccggggc aaacatattt cgccgcctct ttcactgcct
     5401 gttccccgtt acccattgcc acaccgaacc cgacttcaga cagcatttcc acatcgttca
     5461 aaccgtcgcc gaacgccatc acgtccgcca tttccaaacc caatgcttca accacgcttc
     5521 tgatgccgtc tgttttcgac attcccgcag gcagcagatc gaccgcttcc tcgtgccagc
     5581 gcaccgtttt caagccttcc cgttccacaa tatccgacca gggcggcatt tcgttttcct
     5641 ccgcaaacac cagcatctga tacaccggtt tgcttgaaaa ataatcctta tcggcaaaaa
     5701 aatcgctggc gatatgcttc aaggcgcggc acacgcattc cgacagcgcg gacacggcga
     5761 tcccctctcc gccgacaaac gcataatcca tgcccaagcc atccaaatgc gcgcaaaccc
     5821 tgcccatcaa accggcatcc atcggtactt cgcgcacagt tttaccgtgc agcagcgcaa
     5881 actgtccgtt tatcgttacc acggcatcca tgcccgtttc cgccatcatg tccctgacct
     5941 tttcaggaat cgtcgccaaa gaccgccccg ttgccaacgc cgtcaaaatt cccttacccc
     6001 ttaatgcctc taccgctatt ttcacggaag ggcgcaaggt atccgtatat tttcggtaca
     6061 gcgtatcgtc aatatcgaaa aacacgattt taggattcat cacattctct ctcgcattca
     6121 aattgccgca ttgtatccca agcaggcaaa tacttgataa atccttataa atttcccgtc
     6181 aaaattgacc gaaaatacaa aaaggcggat aatccgccca tcctcaaacc cttttcagac
     6241 ggcatttgca gcaatgccgt ctgaaacatt tttacaaagc acacaaatca tgtttcaaca
     6301 cacaggacga cacataaagc gtcgccctat atgttgccct gattcggaaa gggttacgtc
     6361 cctcccaaat aaagtctgat tctaccgccc taaagggcgg ggtttcaacc gaaaaggaaa
     6421 cacgatgaaa gcacccgaac tcttattgcc cgccggcgga ttggaaagaa tgcgcgccgc
     6481 ctacgattac ggcgcagatg ccgtttacgc cggcagcccg cgttactccc tgcgcgcccg
     6541 caacaacgaa tttgccaaac tcgacgttct cgagcaaggc attaaagaag cgcacgatcg
     6601 caacaaaaaa ttcttcctta ccgtcaatac cctgccgcac aactccaaac tcaaaacctt
     6661 cgttgccgac atggagccgc tgattgccat gaaacccgac gcgctgatta tggcggatcc
     6721 gggtttgatt atgaccgtgc gcgaaaaatg gccggaaatg ccgatccact tgtccgtaca
     6781 ggccaacacc accaactact ggggcgtgaa attctggcag aacatcggtg tcgaacgcat
     6841 tattctgtcg cgcgaattga gcatggaaga aatcgctgaa atccgccaag aatgccccga
     6901 catcgaactc gaagtcttca tccacggcgc attgtgcatc gcttattcag gccgttgcct
     6961 attgtcgggc tatttcaacc accgcgaccc caaccaaggc acctgcacca actcctgccg
     7021 ttgggattac aaggttcaca atgccacgga aagcgatgca ggcgatgccc agcttctgca
     7081 aggtttcaac tttgaaaaag cccaagaaga agccaaccaa aactttgaag gcatcaacgg
     7141 ccaaaaacgc catccctacg ccgacaaagt tttcctgatt gaagagtcca accgcccggg
     7201 cgaaatgatg ccgattatgg aagacgaaca cggcacctac atcatgaact ccaaagacct
     7261 gcgcggcatt gaagtggttg agaaactcgc caaaatcggc gtggacagcc tcaaagtcga
     7321 aggccgcacc aagtcgctct attatgtcgc acgcgtggct caatcctacc gcaaagcgat
     7381 tgatgatgcc gttgcaggcc gtccgtttga ttacagcctg ttgagcgaac tcgaaggcct
     7441 cgccaaccgc ggctacacca gcggcttcct cgaacgccac caaacccaag actatcaaaa
     7501 ctacctgacc ggccattcca ccgccaaaca aagccaatac gtcggacacg ttaccgaaat
     7561 cgacaaaaac ggctgggcga ccatcgaagt caaaaaccgc tttgccgtcg gcgattcgct
     7621 cgaaatcatc cacccgagcg gcaaccaaac catcaaattg gaacaaatga cccgcaaagg
     7681 ccagcctgtc gatgttgcac ccggcaacgg catccaggtc aaaatcccca atatgcgggg
     7741 caaagaaaaa gccctcatcg cacgcgtatt gaacccctga gccacaatgc cgtccgaacc
     7801 ccgttttcag acggcatttt gttgaatctt acggtacaat ggcaatgatt tcccaccgca
     7861 agcaaggata tccgacatga aaaaaaatcc tcatactctc cgccgccgcc ctgatgctgg
     7921 cagcctgcca atccggcagc gcacctaaaa acgcgcacac ggcatccccc ggcacaccgg
     7981 ccggagaatc atgcaaagtc atccggggcg acaccgcagg aagcggcaaa aacatcattt
     8041 accgttgctg caacggtcag gcggcaataa atgcagccat tgcagacggc gtattggaat
     8101 cagggattcc cgtcagcttc ggcggcgggg gcgtaccgat tgcaaacggc aggaatctgg
     8161 ttacacggca agcagcaaac ggcgttggca aatccgactc cgaggcctgc gaacgcgccc
     8221 taatcaatgc cgcccgcaaa ttccagcaga ccgcaggcaa actcggcggg cgccgtgtta
     8281 ccggcttcca cagctatttc gacaagcaac cgctgcaagg cggacaatac gactgtcagg
     8341 caggctcgtt ccacgtccgc gtagttatgc gtgccaatgt cgtccgttaa catatcggca
     8401 accaaaaaat gccgtctgaa acatttttca gacggcattt ttaatcccct tgcctgattg
     8461 tgcggcagat tcaaatcggg gcacgccata cttccatatc cgcaccgttc aaacatcccg
     8521 cctgcgggac ggaatcaaag cggcagtccg gttatgttct tgagggcgat tgatccgaac
     8581 gtgccgcaac aaaccgaaac gcattacccc gcacaaggaa aaaccgccaa accaaatacc
     8641 gttataaaaa aggaaagttc aggcggtagg cattttcacg gaaatgcctc accgtcaaaa
     8701 tcaatatttg cctatctgat ttatcgtgcc aaaacaaata gctataaccg cttttaccat
     8761 aaggcacgat tacttccctt acattttgca gagtttcccc cgccaccgac aaatcataag
     8821 gtttaccgtt acccgggctg ccttgtgtag aaacaaaaga atttttaagc agccgcatca
     8881 ctgtatttgc ctgatgttcc gcacccaaat cattcaaaaa attataaatc ctgaccaaat
     8941 cagattgggc ggggcgtgta atgaccaact tcacttgcgg cattcgggca tatccttcgg
     9001 ttcatcgcca cccaagccgt ccacccagtc cgcaaactca ttaagcgtaa tatgcaaccc
     9061 tgtttcctga taatcctgaa aagcctgcat cgcccgctta tcgtaggctt gtttggcttt
     9121 caaccgttct atatgaccgt ccaccgcatc caatacgata ctgtgcacac tgcccccgaa
     9181 atcccgggcc agctcttgta aaacggcttt gcggtatccc agtttgacac cggttacttc
     9241 ctgattggta agcatcatta ttttcccata aatcaaacgt ctgacacggc attataaaca
     9301 caatgcggca tctgccgcca cccttgcggg cgcagtgtta ccggcttcca cagctatttc
     9361 gacaagcagc cgctgcaagg cgggcaatac gattgtcagg caggttcgtt ccacgtccgc
     9421 gtagttatgc gcgccaatat cgtccgttaa acatatcggc aaccaaaaaa tgccgtctga
     9481 aacatttttc agacggcata gttcatcaat caaatcggta atacagataa tcgttcaatt
     9541 aggattgctt ctgcaggtgg gacaacacat caaggtgttg cccgatgccc tgtcggaagg
     9601 aaacgccact gttcccgact gtgaaacaca ggataaatat caacgggcat ttgcttcttt
     9661 tttgcctgca aatacgccga agccgtcttt tctattatct cgatctttat agtcatatct
     9721 gcctgccatt tccgcgccat attgaccata aaatctcccc gaaatatcgc cttcaacatt
     9781 atccgatttc cacttacctt gaaatccact tccatcgata ctcgcagtaa attcttgcat
     9841 ccccatacct gaaggatctt tggtatcaat ttttcctgtt aaggttttca gtgagaaatc
     9901 aacatttgcc gtaaacgttc ctgcagcttt atacgcgcta ttattaaacc aatcattctt
     9961 atattttcca acaaaatgca gcaccttacc ttgatattta gctttgcctt ccaacggagc
    10021 ttctgtcggt ttaccctgta caaaaagggt gtatgtaccg tcttgtaatt tagctgcccc
    10081 ataaatcaga tgctgatatt gcccttgaga aaccattacc ttgtcaaaat cactcatcaa
    10141 accagggtga ttacgtgata cagtctcacc agcttccttt aaatcaatag tttctccatt
    10201 tatcactaaa gttgtaacgt ctcccgtacc gtcaaaatat ttctcgccaa acacgcctgt
    10261 tttaggttgg ttatcggcag cattttgggg ttgttggtct tgagcttggg gcgaatgggc
    10321 ggccggggcg tcgccttgca acccctcttc cgcatcctgc ctgccgcttg cttcatcagc
    10381 ctgcatcccg tcttgccccg catctttgga atcttccgct tccgcctgcg ggtttgcacc
    10441 ttcggtattc gtcgcaacct cagtatgttc ggcgttttca gaagaagggt ttgccggcat
    10501 ccctgtgcct tcgcttacag cgtttccttc cgtaccatct agagattccg catttttcgg
    10561 cgcatcggta tcttcacctg aaccgtaacc tattgatgta cttccattgc caatagtagt
    10621 accttcatta cgaccatttg ttaatccttc cttactatag tttggttttg aaacttcttc
    10681 atttgggatt tctactgcat agattttttc ttgatattca tctgcttttt cagctgcttc
    10741 gtcattagtt tgagcatttt gaatagcttt taatccttct tcttttagac gatttacttc
    10801 attttttaat tctgattttt tagactcatc atcaactttg tctattcctt ctagtctact
    10861 atttgctgct tcatttatag tttttgaatt ttcttctttt gctgtttcta acggtgcttc
    10921 agtttctttc tctaaagact tctctgaatc ctgatttcct acagctggtt catcggcttg
    10981 aggtttttct tcattagaag ttgaatcgtt tgagttacca tcagttgtag cgtccgttga
    11041 tgaattattt gaagtatttc ccgttgtatc agttgtttct tctatatttt ctactgtctc
    11101 ttcagtttct ttagcttctt ttccttctga tgtatcttct ttaggtgccg gtttgatttc
    11161 ttctcctgct tcttttggtg ttgactctga ttccactgtt ccttcagatg ttgattctgt
    11221 tgaagtttcc acatgttggg gcgcatcatt ttgcactccg ccatcagcgc ctgcctgcgc
    11281 ggtttcccct tctccctgca tatctttagg cggtatttct gttttggatt ctcctccatc
    11341 cccgcccgaa gcagtgcctg ccgtatcagc acccggggca gggcttaccg tatcagcggg
    11401 gggggtaact ttatttgacg gtgtttctga ggatttgacc acaggtgtac cccctccccc
    11461 tgaaatacag gcggaaaggg cgaggatgga tgccattgca agcaggctcg gtttgaaagg
    11521 aatcgtcata attatctcct atggcatatt tttaatgaaa aatatgataa ttatttatgt
    11581 ttaatggttt aaaaataccg ccatacgcgg caggaaatac ggctctgctt cacaaatcgg
    11641 ggcagggtcg taaaacacat tagtgcctgt gcggcatcat accttcgggc gcttcggcat
    11701 ctgctgccaa gccgaaagtt tcgcgcaaca cgactttgta gaatgcaaag gcttcgcgcg
    11761 cgccttggat ggcttccgct tcggcttcgg ggcttaagcc caatgcgttc agatgctcga
    11821 caaaagcgcg ccagtgtttg ccgcgaccgt ccggatgcgg agcgaggtgg cgcgcgccgt
    11881 gttcgccgtt gtaatcgagt ttttgggcgt gtttgaacaa aaacgccgcg cccaaattgg
    11941 atccttcggc gcaataaagc cagccgattg ctttgttgcc ggtttcgtgt ggtaattctt
    12001 tgtcgaattt gtaaggctct tcgcccaagt ctttcaagtc ttgcgttacg gcatcgtatc
    12061 gcgccatata ttccaactcg ggaatggctt tgtttaattc ggcatcttta tagatgtggt
    12121 cgacagcctt gtggaaaacg gattggagtt tcaaaaattt gatgtagttt tctttgctga
    12181 caaacggttg gacagacata acgaggttat ccacgctgtc gtgaaccgcc gtggtatccg
    12241 ccttcaggcg tttggcaaac gtcagggctt ggttttcggt ttcactcata agttttcctt
    12301 tgtcggtaag ggataaggat gcggtgcggg caaaatccgt acctgaccgc atatatagtg
    12361 gattatatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc tcaaagagaa
    12421 cgattctcta aggtgctgaa gcaccaagtg aatgggttcc gtactatttg tactgtctgc
    12481 ggcttcgccg ccttgtcctg atttttgtta atccactata aaaataataa agaatcataa
    12541 acgaaattta ttatcacata tttttggaaa aaatatcatt tgcgtgatgt ttttaagcag
    12601 gtattttact attctttaca gaatcgggat tttatcaaat gggttcggca gtcggcggac
    12661 agccgctcga aaaaatattt ttgccggaca ccaagggttt gttcatactg ccgaacctgc
    12721 cggttttgca tcctgattgg gtgtatcgcc ttttttcctt tataatgccg ccacttatat
    12781 ttgccacttt cccgatgaag ccgtttgccg aaaatatccc ccacagcctt cgcggcaact
    12841 gccgcgacga agccctaccg ccgcatacgg tagattgccc ggaatgcggc tgccgcgcgg
    12901 atgtgcctcg gttggacagg ggggaggcgg cgttctgccc gcgctgcggc tataagctct
    12961 tcagggtggg caggcatcct ttttccgccc cgcccgctta tgcggcggct tcgctgattt
    13021 tgatggcgtt tgcttacggt atgacgtata tcgaggtcgg gataccgggt gcggcatccg
    13081 tcctttcgct gcccgagatg atgcgcctga tggtgtttca ggattatggt tttttggccg
    13141 aagtgatgtt tgtgctgacc ttcggcgcgc cggttctgtt tctgctgctg tgcctgtatg
    13201 tctatgccgc gctgatacgg aaacgggtgt atcctgcgct gcgtttggca acgcgtgtga
    13261 tggtgcgctt gaggcaggcg atgatggtgg atgtgttttt tgtttccacg ctggtggcgt
    13321 atatcaagct ctcgtctgtg gcagaggttc gcttcgggtc ggcgttttat ctgatgttcg
    13381 cgctgtcggt tatgctgatt cggacttcgg tatccgttcc ccagcattgg gtgtattttc
    13441 aaatcgggcg gctgacgggg gataatgcgg ttcagacggc atcggaaggc aaaacctgtt
    13501 gcagccgctg cctgtatttc cgcgacagtg ccgaatcccc ctgcggtgtg tgcggcgcgg
    13561 aactgtaccg ccgacggccg aaaagtctga gtatttcgtc ggcgtttctg acggcggcgg
    13621 ttattttgta tttccctgcc aatatcctgc cgattatgat ttcgtccaat cctgccgcca
    13681 cggaggtcaa taccatcctt aacggcatcg cttatatgtg ggacgagggc gacaggctga
    13741 ttgcggcggt tattttcagc gcgagtattt tggtgccggt actgaagatt gcggcaatgt
    13801 cggttttgat tgcgtccgcc cgcttcgctt tgccaacggg tgcaaagaaa ttgtcgcacc
    13861 tctaccgcat caccgaagcg gtcggccgct ggtcgatgat tgatattttt gtgattatta
    13921 ttttgatgtg ttcgttccac acttatgccg cgcgcgtcat tccgggcagt gcggcagtct
    13981 atttctgcct ggtcgtgatt ctgacgatgc tgtccgccta ttatttcgac ccgcgcctgc
    14041 tttgggacaa acgcgcttca gacggcattg ctttcaatga aacggaaaaa tatgactgac
    14101 aacagccccc ctccaaacgg acacgcccaa gcacgcgtcc gcaaaaacaa caccttgctc
    14161 tccgccgtct ggctggttcc gctgatcgcg ctgattgccg gcggctggct ttgggttaag
    14221 gaaatccgca acagggggcc tgtggttacg ctcttgatgg acagcgcgga aggcattgag
    14281 gtcaacaata cggtcattaa ggtattgagc atcgatgtcg gacgcgttac ccgaatcaaa
    14341 ctgcgcgacg accagaaagg tgtggaagta accgcccaac tcaatgcgga cgtatccggc
    14401 ctcatccgca gcgacacaca gttttgggtg gtcaaaccgc gtatcgacca aagcggcgta
    14461 accggtttgg gtacgctgct ttcgggttcg tacatcgctt ttacacccgg caaaagcgac
    14521 gaggcaaaag acgtgttcca agtgcaggac attccgcccg ttaccgccat cgggcaaagc
    14581 gggctgcgct tgaatttgat tggtaaaaac gaccgcatcc tcaacgtcaa cagccctgtt
    14641 ttgtatgaaa actttatggt cgggcaagtc gaaagcgcgc atttcgaccc gtccgaccaa
    14701 agcgtgcatt acaccatctt catccaaagc cccaacgaca aactgattca ttccgccagc
    14761 cgtttttggc tggaaagcgg catcaatatc gaaaccacag gcagcggcat caaactcaat
    14821 tccgcccctc tgcctgccct gctgtcgggc gcgatttcat ttgattcgcc gaaaaccaaa
    14881 aacagtaaaa acgttaaaag cgaagacagc ttcacgcttt acgacagccg cagcgaagtc
    14941 gccaacctgc ctgacgaccg ctcgctgtac tacaccgcgt ttttcaaaca atccgtgcgc
    15001 ggactgaccg tcggttcgcc cgtcgagtac aaagggctga atgtcggcgt ggtttccgat
    15061 gtcccttatt tcgaccgcaa cgacagcctg catttatttg aaaacggctg gattcccgta
    15121 cgcatccgca tcgagccttc ccgtttggaa atcaatgccg acgaacaaag caaagagcat
    15181 tggaaacaac aatttcagac ggctttaaac aaaggcctga ccgccaccat ctccagcaac
    15241 aacctgctga ccggcagcaa aatgattgag ttgaacgatc agccttcgtc ttcgcccaag
    15301 ctgcgaccgc ataccgttta tgcaggcgat accgtcatcg ctacacaagg cggcggtttg
    15361 gacgatttgc aggcgaaagt ggtggatttg ctggacaagt tcgacaaact gcctttggat
    15421 aagacggttg ccgaattgaa cggttcgctt gccgagctca agtccgcact caaatctgcc
    15481 aatgccgccc taagctccat tgacaaactg gccggcaatc cgcagacgca aaacattccg
    15541 aacgagttga accaaaccct gaaagagttg cgcacaaccc tgcaaggcgt atcgccgcaa
    15601 tcgcctatct acggcgacgt acaaaatacg ctgcaaagtt tggacaaaac cttaaaagac
    15661 gttcaacccg tcattaacac tttgaaagaa aaacccaacg cgctgatttt caacagcagc
    15721 agcaaagacc ctatcccgaa aggaagccga taatgcgcct tttcccgatt gccgccgccc
    15781 tgtcgcttgc cgcctgcggt actgtgcaaa gcacacaata tttcgtgttg cccgacagcc
    15841 gctacatccg tcctgcaacg caaggcggcg aaactgccgt cgaagtccgt cttgccgaac
    15901 cgctcaaacg cggcggactg gtctatcaaa ccgaccccta ccgcctcaac accgcacaaa
    15961 accacgtttg ggcagacacc ttggacgata tgctcgaagc ggcgttgagc aatgcattca
    16021 accgtttgga cagcacacgc atctttgttc ctgcctcacg cagcggcagt accgaaaaat
    16081 ggacggtcta tatcgacgca ttccaaggca gctacacggg caaaaccctc atcagcggct
    16141 acgccgtcct acccgacggt acgaacagac ctttccatat cgaaaccgaa cagcagggtg
    16201 acggctacgc cgccatgacc gccgcactcg aacagggact gaaacaggcg gcgcaacaga
    16261 tggtcgagta aaccgtgaac tattgcgaat ttgccgcctc acttcccgaa aacaccgata
    16321 acccgaacaa acattaccac gacacgcaat acggttttcc gattgaggac gacaatgaat
    16381 tgtttgagcg gctggtgttg gaaatcaatc aggcaggatt aaactggacg ctgatgctga
    16441 agaagcggca ggcgtttcag acggcatttg aaggtttcga catcgatacg gttgccgcct
    16501 tcgacgacac cgaccgcgaa cgcctgcttg ccgacgcggg cattgtccgc aaccgcctga
    16561 aaatcgatgc cgccattttc aatgcacggc aaatccaagc gttgcaacaa gaatacggct
    16621 cgttcaagaa ctggctcgac acgcaccatc cgcgaagcaa agacgaatgg gttaaactct
    16681 ttaaaaaaca tttcaaattc gtcggcggcg aaatcgtcgg cgaatttctg atgagtaccg
    16741 gctacctcaa aggcgcgcac gccgaaagct gtccggttta ccgtaacacc ctgaaatacc
    16801 acccgaaatg gctcgatgcc gtctgaaaaa ccaatgaaca gaagaatctt cctcctcggc
    16861 gcgggcgcgt tgcttcttac cgcctgcggc aaaaaatccg cccgaaccca cgccaaaatt
    16921 cccgaaggaa gcaccgtact tgccttgggc gattcgctca ccttcggcta cggcgcaaac
    16981 cccggcgaat cctaccccgc gcaactgcaa aaactgacgg gttggaatat tgtcaacggc
    17041 ggcgtatcgg gcgatacatc cgcgcaagcc ctgtcgcgcc tgcccgcgct gttggcacgc
    17101 aaacccaagc ttgtgattgt cggcataggc ggcaacgact ttctgcgcaa agttcccaag
    17161 gagcagaccc gcgccaatat cgcgaaaatc atcgaaaccg tgcagaagga aaacatcccc
    17221 gccgtcctcg tcggcgtgcc gcacatcaca ctgggcgcgt tgttcgggca tttgagcgac
    17281 catccgctgt atgaggattt gtccgaggca tacggcattc cgctgttcgg cggcgcgtgg
    17341 gcggaaattt tgggcgataa taatctgaaa tccgaccaaa tccacgccaa cggcaaaggc
    17401 tatcggaaat ttgccgaaga tttgaatcaa tttttgagaa aacaggggtt tagataaaca
    17461 aaggtttatc cgcacccaag ttgtttatat aatcatgaac cgactgggac accaaactgc
    17521 ttcgggacgc atatgccgtc tgaagtgcaa agcctacgcc atacagccgc atgaagttgc
    17581 agcggtatgg cgttttttga aaaagacggc ctgccggttc agacggcatg accgaccgtc
    17641 cgagcctgct gtggataaag cccggacagg ctgaaatcat ggaatattgc gaacctgaag
    17701 aagcatccga cccgtacgca acatacaggc gtgccaacct gatggcgggt ctgccgctgt
    17761 ttgtcgtgat tttggttctg ctcaatattg tttttccgct tccggcgtat ccattggctt
    17821 ggctggtgcc tgcaggtttc atggttttgg gcggcggctt tcccttatcg ctgccgcttg
    17881 tggcgctgct tgtcctgacc tgctgcattc tggcgcattg tccgccatta tcccgtcttt
    17941 tgtgctaccc ttgcccgaat catccgatgt ctaaaaattc tgcctgatgg cagccctaca
    18001 aacccgaagg agtagaaatg aaactgtccg aactgttcaa ccccaacgaa tttgccgcgc
    18061 ggcatttgag tttcggcgac gaagcggcgt tgcttgccgc tgtcggcgag aaaagtatgg
    18121 acgattttgt cggcaacacc gtgccgcaaa gcatccgtat gccgtccgaa ctcgatttgc
    18181 ccgatgccct gaccgaagcg gacgcgttgg caaaattgaa aggcattgcg tcgaaaaacg
    18241 tgatcaacaa gtcctatatc ggtttgggct attatccgac ccgcgtgccg aatgtgattt
    18301 tgcgcaacgt attggaaaac ccgggttggt acaccgccta cacgccgtat caggcggaaa
    18361 tcgcgcaggg gcgtttggaa gcgttgctga acttccagca ggtgtgcatc gatttgaccg
    18421 gtttccctgt ggcaggcgcg tctttgctgg atgaggcaac tgccgccgcc gaagcgatgg
    18481 cgatggcgca ccgcgtgggc aaagtgaaat ccgagcgttt ctttgtggat gcgcgcgtgt
    18541 atccgcagac tttggacgtg atgaaaaccc gcgccaaata tttcggcttc gagctggtgg
    18601 tcggcgattt tgccaaagcg gatgaaggcg aatacttcgg cgcgctgttc caatacgtcg
    18661 gcaaagacgg cgacgtgcaa gacttgcaaa gcgttatagg ccgtctgaaa gccaaaggca
    18721 cgattgtcgc cgttgccgcc gacattatga gcttggtttt gctgaagtct ccggctgaat
    18781 tgggtgcaga tattgctttg ggcaacacgc aacgcttcgg cgtgccgatg ggcttcggcg
    18841 gtccgcatgc tgcttatttc gcgtttaaag acgagttcaa acgttccgcc ccgggccgta
    18901 tcatcggtgt atccaaagac gcatcgggca aacctgcctt gcgtatggcg ttgtccaccc
    18961 gcgagcaaca catccgccgc gaaaaagcca cgtccaatat ttgtaccgca caagcattgc
    19021 tggcgaattt ggccggtatg tatgccgttt accacggccc tgaaggcgtg aaacgcatcg
    19081 ccaaccgcat tcacgcgctg gcttctgcct ttgccgatgc gctggtttca gacggtctga
    19141 atgtggttca cgaagtcttc ttcgataccg ttaccgtcga tttcggcagc aaagagaaag
    19201 cagaccaagt gtttgccgtt gctttggaat cgggttacaa cctgcgccgc gtcagcgata
    19261 cccaaatcgc cgccgccttc cacgaaacat ccgtgcgcga agatttgaca gatttgtacc
    19321 gcgcgtttac cggcaaggat acgttcgcat ttgccgatga tgtcaaaggc cgtctgaacg
    19381 ccgaactgct gcgtcaagac gacattctgc aacatcctgt gttcaacagt taccacaccg
    19441 aacacgaaat gctgcgctac ctgaaaaaac tcgaagaccg cgacttggcg atgaaccgca
    19501 gtatgatttc attgggcagc tgcaccatga aactcaatgc gactgcggaa atgctgccga
    19561 ttacttgggc ggagttctcc gacatccacc cctacgcccc cgaaacccaa accgcaggct
    19621 accgcgaact cttaacagac atggaaaaca gcctgaaagc catcaccggc tttgacgcga
    19681 tttccttcca gcccaactcc ggcgcgcagg gcgaatacag cggtatgctt gccatccgcc
    19741 gctatcagga agccaacggc gagggacacc gcaacatctg cctgattccg aaatccgccc
    19801 acggtaccaa ccctgcgact gcggctatgc tcggtttgaa agtcgtcgtt gtcgataccg
    19861 acgaacacgg caacgtcaac atcgacgatt tgaaagccaa agccgagcaa caccgcgacg
    19921 ctttgtccgc catcatgatt acctacccat ccacccacgg cgtgtacgaa gaaggcatcc
    19981 gcgacatctg ccgcattatt catgaaaacg gcggacaggt ttacatggac ggcgcgaacc
    20041 tcaacgccca aatcggcatc atgcagcctg ccgaagtcgg cgcggacgtg ttgcacatga
    20101 acctgcacaa aaccttctgt atccctcacg gcggcggcgg cccgggcatg ggtccgattg
    20161 gcttgaaagc ccatctggct ccgttcgcac cgggacacgc tttgaccgac acccacagcg
    20221 ccagtgccga ccaaaccgcc gttgctgctg cggccttcgg ttctgcgtcc atactgccga
    20281 ttacttggat gtatctgacc atgatgggca aacaaggcat ggaacaggcg acacgctggg
    20341 cattgctcaa cgccaactac gttgccaaac gcctgagcga agactatccg attctctaca
    20401 ccggcaaaaa cggccgtgtc gcgcacgaat gtattgttga tttgcgtccg ctcaaagccg
    20461 aaagcggcat caccgaaact gacatcgcca aacgcctgat ggactacggc ttccacgcgc
    20521 cgacggtttc cttccctgtt gccggtacgc tgatgatcga gccgaccgag agcgaaagca
    20581 aagccgaact cgaccgcttt atcgccgccc tgaaatccat tcgccgcgaa gtgcagaaag
    20641 tcatcgacgg agaatggccg aaagacgaca acccactggt caacgcgccg cacaccgccg
    20701 cagatataac cggcaactgg gcgcatccgt attcccgcga agaagccgtc ttcccgttgc
    20761 cgttcgtccg cgaacacaag ttttggccct tcgtcaaccg cgtggacgac gtgtacggcg
    20821 accgcaatct cgtgtgcagc tgcccaccga tggaaaatta tgaagactga ctgttgatat
    20881 cttaaaaaat gccgtctgaa acattttcag acggcatttt catcaacggc aaaccagttg
    20941 caccaataca cgtatctcga ctataacttt aaaacaaatg ggttaaacca gtatccatac
    21001 atcagctttt ttatcatcct actttttatt catccgatcg tgcaaacaga tttcaaagat
    21061 gaaaagccta ttcacaccct ttgatgtcat ttccacacgg acaaacaaat atagtggatt
    21121 aacaaaaacc agtacatcgt tggctcgcct tagctcaaag agaacgattc tctaaggtgc
    21181 tcaagcacca agtgaatcgg ttccgtacta tttgtactgt ctgcagcttc gtcgcctttt
    21241 cctgattttt gttaatccac tataaattcc cataaaaaaa cggagcagat acctgccccg
    21301 tttttattta atccgaaatt ttaatctaaa tttagaattt tgcaccggat tggtttgcca
    21361 tatagtcaac agccgctttg acttcgtcat cgctcaaacc tgcattgccg cctttggcag
    21421 gcatcgcgtt aaagccttca agggcgtgtt tgtgcaaggt ttctttgcct tttttgatac
    21481 gcggtgccca atcgtctttt ttgcctatgc cgggaatacc gggaatcgaa ccgccgtggc
    21541 acacctgaca ggttgcttcg aagacttttt taccgtcaac gccgaccgca ggggctgccg
    21601 cacccttgtc ttctgccttc gcttctgccg gagctgcact atcggcagga gcagaagctg
    21661 ttcctgaagc ggcattgtcg gcaggcgcag cctcatcagg attcgggaaa gaaccgccgc
    21721 ttttgttcgc catgtaagta atcgcccgtt tgagttcctg atcggtcagg tctgccgcac
    21781 cgcctttggc aggcatggcg ttaaagccgt tcagcgcgtg ttggaacaag gtatcgaagc
    21841 cttgcgcgat acgcggtgcc caatcgccgt tgtgttccag tttcggagcg ttcggcacat
    21901 tgctgtccgc cgcgtggcat tggatacaga ttttgccgaa aatctgttcg ccttggcgtt
    21961 cgccgacggg gatgccgtcg cccatcgtca attgtccgac aggctggata cgggtctgcg
    22021 ttgctgcttc cgtagtggca tcgacatcgc cgaacgagcc gctgcccgcc agcttaatca
    22081 ggaaataaag gactgcaata acaataacga taccgctcac aagggtaaac agtgcagagc
    22141 cttgggcttt gttgtcgcgg agttgtttca tttggtaggc ctcgccgtca ggttaggttg
    22201 tgctgtaaat tatagtttgg tgtgttaaac gcagttaaca atattttgct ggattatact
    22261 gaattcacag ggtctttcca atcgctatca ttgaaaatat gaaaaaattt gccaacggta
    22321 tctgtataaa acaaataatc ctttgaaaat aatggtttat cctcaagaaa actctcctta
    22381 tgccgccata cgccgcctgc cggcgcaaga taacctttgc caatttgcag aatttacgtt
    22441 aaccttacgt tttacgcacc catagctcag ttggaagagt gtcagtttcc gaagctggag
    22501 gtcacaggtt cgatccctgt tgggtgcgcc aattataaag agaccgtctg aaagataaat
    22561 atttttcaga cggtcttttg acttacttca aactcttatt tcaagacttc cgcaaatgcg
    22621 cgggcaacat agtcggtatt cgacgtattc agtccggcga cgcacatcct gccggaatcc
    22681 agcaggtaaa cggcaaattc gtcgcgcagc ctgcggactt gttccacgct caatcctgtg
    22741 tagccgaaca tgccgcgctg tttgatgaaa taagtgaaat cgcgatcggg gatttgcgca
    22801 gttaagacat cataaagttt ctgccgcatc gcacggatgc ggtcgcgcat catataaacc
    22861 tcgttttgcc acaaggcgta aagttcgggg ctgttcatca cgtcggcggc gatatacgcg
    22921 ccgtgcgcgg gcgggctgga gtagatgcgg cggacggtga atttgagctg tccgaacacc
    22981 aaatccgctt cttccttatt cgggcaaacc acgcttaagc cgccgacgcg ctcgccgtag
    23041 agcgacaggt tttttgagaa ggaattgctg acgaacaagg gcaattccat ttccaccgct
    23101 ttgcggacgg cgtaggcatc gctgtccaaa tcgccgccga agccttggta ggcgatgtcc
    23161 ataaacggaa tcagtttgcg cgttttgatg atgtgcaaca cttcgtccca ttgttgttcc
    23221 gacatatcca cgccggtcgg gttgtggcag cagggatgga ggatcaggac gctgttttcg
    23281 ggcagggtgt tgaaaaacgc ggtcatttcg tcgaatttca cgccgacggc agcagggtcg
    23341 taatatgggt aagtgccgac ctcgaaacct gcgccttcaa aaatgccgcg atggttgtcc
    23401 caagtcgggt cgctgacgta ggcgcgcgct tcgggaaacc agcggtgcag gaagtccgcc
    23461 ccgactttga gtgcgcccga gccgcccaag gtttgtacgg tagcgatgcg tccttgcgcg
    23521 agcgcagggt tgtctttgcc gaacaataaa tgctgcaccg cgctgcggta agtgtccaag
    23581 ccttccatcg gcaggtaggg cgacggcgca ggcgtggcgg cgcgggcggt ttcggcacgg
    23641 cgcacggatt ccaacacggg cattttgcct tcgtcgtcga aataaatgcc tatgctcaaa
    23701 ttgacttttt cagggcgcgg gtcgtttttg aaggtttcga ccaaactcaa aatcgggtcg
    23761 cccggatagt attcgatgtg tcggtacata gtccttacct tttacttttt caaaggattt
    23821 tctttttcaa caatacacca ctttcgatat ggtgcgtaaa cgggaattgg tcgaacaggg
    23881 cggcgcgttc gaccgcatgg gtttccacca aggtgtccaa attggcacgc agcgtttcgg
    23941 gattgcagga aatgtagatg atgttgtcaa actgcgacac cagcttcaaa gtttcctcat
    24001 cgataccggc acgcggcgga tcgacgaaaa tagtggaaaa tgcgtaatcc gtcaaagcaa
    24061 taccgccatc cttaaggcgt ttaaactcac gttttccggt ataggcttcg gtaaattctt
    24121 cagcagacag acgggcgatt ttgatgttgc cgatgcggtt ggcttcgata ttccattgcg
    24181 ccgcgctgat ggaggttttg gagatttcgg ttgccaaaac acgttcaaac ttttcagata
    24241 aaggaagcgt aaagttgccg tttccgcaat acagttcgag caaatcccca tccaatcctt
    24301 ctgctgcacc gcaggcccat tcaagcattt tctgacacac ggcggcattc ggttgggtaa
    24361 aactgccttc aatttgccga taacggaaat cccggttgcc gaccttcaaa gtttccgtta
    24421 catagtcctg ttttaagact attttctgtc ccctgctccg cccaataacg gaaatatcca
    24481 actgttgctg taacgcttgc gccgcctgca tccactcatc atcaagcctt ttgtggtaaa
    24541 tcatggtaac cagcatttcc ccgctgagcg tagacaaaaa ttcgacggca taccaacggt
    24601 ttctcagttc ggcagattgg gcggcaacgg caatcaattc tggcatcagg cggttgacgg
    24661 cttcggaagc cgcttcaaaa cggtcgcaac ggatcaggct tgccccgcca gccttttgtc
    24721 ctttttcaaa catggcataa aacatttcac cgccttcgtg ccaaatacgg aactcggcac
    24781 gcatacggta atgtttgtcc ggagattcgt acacttccca ctcaggaaca tccaaacctg
    24841 caaaaagggt tttaaggtgg tcttttttat cttgaagctg ctgcgtgtag tcgctcatat
    24901 cgctatcctg aaaaatcaga ccggattata agccgattca ctgcaaaaca cgcaacccct
    24961 ttaccggcat ataacccgtt ttcctccaac ttttatgcta aaatccgccg tctccaacat
    25021 accgccgaca gaaggaaaat atggcaggca acactttcgg acaactcttc accgtgacca
    25081 cgttcggcga aagccacggc gcaggtttgg gctgcatcat cgacggctgc ccgcccggac
    25141 tggcattaac cgaatcagac atccaagccg acctcgaccg gcgcaaaccc ggcaccagcc
    25201 gccacgttac ccaacgccgc gaagccgacc aaatcgaaat cctctccggc gtattcgaag
    25261 gcaaaaccac cggcacgccc atcgccctct taatccgcaa taccgaccag cgcagcaaag
    25321 actacggcaa catcgcccaa agtttccgcc ccggccatgc cgactatacc tattggcaca
    25381 aatacggcac gcgcgactac cgcggcggcg gcaggagctc cgcccgtgaa accgccgccc
    25441 gcgttgctgc cggagccgtt gccaaaaaat ggttgaaaga aaaattcggc acggaaatca
    25501 ccgcctacgt tacccaagtc ggcgaaaaag aaatccggtt tgaaggctgc gaacacattt
    25561 cccaaaatcc tttttttgcc gccaaccata gccaaattgc cgagctggaa aactatatgg
    25621 acagcgtgcg caaatccttg gattccgtcg gcgcgaagct gcatattgaa gccgccaacg
    25681 tccccgtcgg cttgggcgaa cccgtattcg accgcctcga tgccgaaatc gcctacgcca
    25741 tgatgggcat caacgccgtc aaaggcgtgg aaatcggcgc aggttttgac agcgtaacgc
    25801 aacgcggcag cgagcatggc gacgagctca cgcctcaagg cttcctatcc aaccactcag
    25861 gcggcatctt aggcggcatc agcaccgggc aagacatctg cgtcaatatc gccatcaaac
    25921 ccaccagctc catcgccacc ccgcgccgca gtatcgacat caacggcaac cccatcgaac
    25981 tcgccacgca cggcagacac gatccctgcg tcggactgcg cgccgcgccg attgcagaag
    26041 ccatgctcgc gttagtcctc atcgaccacg ccctgcgcca tcgcgcgcaa aatgccgacg
    26101 ttcaggttaa tacgcccgac attacccttt caaacaaata aaaatttagc caaaacacag
    26161 actttataat agaatatcga gcattgccgt gcagccttga cgcacgggtt tgtttagagg
    26221 aatacaaccg aaatgacaca agaaaccgct ttgggcgcgg cactgaaatc cgccgtccaa
    26281 actatgagca aaaagaaaca gaccgaaatg atcgccgacc atatctacgg caaatacgat
    26341 gtattcaaac gcttcaaacc gttggcgctc ggcatcgatc aggatttgat tgccgctttg
    26401 ccgcaatacg attccgcact gattgcacgc gtcctcgcca accactgccg ccgtccgcgc
    26461 tatctgaaag ccttggcgcg cggcggcaaa cgtttcgatt tgaacaaccg tttcaaaggc
    26521 gaagttaccc ccgaagaaca ggcgatcgcg caaaaccatc ctttcgtgca gcaggctttg
    26581 caacagcagt ccgcccaagc tgtcgccgaa acgccgtctg ttgaagccga agcagccgaa
    26641 tcttccgcag cagaataaat ccccaaacga aatgccgtct gaaaaccgat ttggtttcag
    26701 acggcatttt ttcgtatgcg gcaatcacgg ttcaaatatc caattccgcc gtatcgcctt
    26761 cgcgttccat ccaagcgcgg cgggcggcgg cttcgccttt gcccatcagt ttgacgaaga
    26821 tgtcgcgcgt ctcgtcatct gcaccttctg ggatttgtac ctgcaacagg cggcgggtgt
    26881 cagggtgcat ggtggtgtct ttgagctggt cggggttcat ttcgcccaag cccttgaaac
    26941 ggctgatgga ataggcggtt tctttgacgc cttctttttg cagccgctcc aaaatgctgt
    27001 cgagttcgtt ttggtcgagg gcgtagaatt tgcgggcagg tttgcttttg ccttgtgcgt
    27061 tgacatcgac gcggaacagc ggcggctggg cgacgtagat gtgtccgtcg gcaaccagtt
    27121 tcgggaagtg gcggtagaat aaggtcagca gcaaaacttg aatatgcgag ccgtccacgt
    27181 cggcatcgga caggatggcg attttgccgt agcgcaggcc gcttaaatcg ggatggtcgt
    27241 taataccgtg cggatcgacg ccgatggcga cggaaatgtc gtggatttcg gcgttgccga
    27301 agagttggtc ggggtggact tcaaagctgt tgagcacttt gccgcgcagg ggcaggatgg
    27361 cttgggtggc tttgtcgcgg gcgagtttgg ctgagccgcc ggcggaatcg ccttcgacga
    27421 ggaagagttc gttttcgcgg atgtcttcgc tttcgcagtc ggtcagctta ccgggcagga
    27481 cggcgacgcc gctgcctttt ttcttttcga ttttcttaac cgaacgcatc cgcgcctgcg
    27541 cctgacggat ggcgagttcg gcaatttttt taccgaagtc cacgttttgg ttcagccaca
    27601 attccaaagg gtcgcccgct acagcggcga caagtttcag cgcgtcgcgg ttggtcagct
    27661 tgtctttggt ctgaccttgg aactgcgggt cgaggacacg ggcagagagg acaaaggcgg
    27721 ttttgccgaa cacgtcgtcg ctttgtactt tcacgccgcg cggcaagagg ttgtgcagat
    27781 tgatgaaatt gttgacggcg ttgaacacgg cttgtttcaa gcccgcttcg tgcgtgccgc
    27841 ccagcggggt ggggatgagg ttgacataac tttcgttggc acacgagcct tcttccagcc
    27901 aagtcagggc aaaggcggcg ccttcgccga tgctgaaatc gccgttgtgg tcgtctgaaa
    27961 tgtagttttc gcaagagaag ataggcacgg cttcctgcgc gtcggcaatc aggtcggtca
    28021 gatagctttt cagaccgtcg gggtaatgcc aggtttgggt gtgcgcttcg tcttcgcctt
    28081 tgaccggacg ggtcagggaa acgcgcacgc ccggcagcag cacggctttg gcgcgcagca
    28141 ggcgttcgag ttcggggatg ctgtaattcg ggctttcaaa atatttgccg tccggccaga
    28201 cgcgcacttc ggtgccgctg tctttgacgg cgcatttgcc cacttgtgcc aacggttcga
    28261 ccacgtcgcc gccggcaaac acgatgcggt ggattttgcc ttcgcgtttg accgttactt
    28321 caaggcgggt ggaaagggcg ttggtgacgg atacgcccac gccgtgcagg ccgcctgaaa
    28381 aggcatacgc gctgccgccg tcttttttgt tgaacttgcc gcccgcgtgc agacgggtga
    28441 atacgagttc gactacggat acgccttctt cgggatgcag gccgacggga atgccgcgcc
    28501 cattgtcgtg cacggaaagc gaaccgtctt catgaatttg cacgtcgatt gcagtcgcga
    28561 aaccgcccaa cgcttcatcc gccgcgttgt cgatgacttc ttggcagata tgggtcgggc
    28621 tgtcagtgcg ggtgtacatg ccgggacgtt ctttgaccgg ctccaagcct ttgaggacgg
    28681 tgatgctgga ttcgctgtat tggttgtttt tagccatagg aataatctga aagtaagaaa
    28741 aacaacgctt tcagacggcc tgaaagcgtt gcgttccgtt gttttaccgg ttgccggaag
    28801 gttggcgggc ggcaaagtct tcataacttt ccataccgcg caggaagcgg gaagagagtt
    28861 ctttcaacgc ccccaaataa acgtcgcgtt tgaactcgat gacttcgtca acgggcgccc
    28921 aatattgatg ccaacgccag ccgtcaaatt cggggtggcg ggtggcgcgc aggttgacat
    28981 cgcaatcccg gccggtcagg cgcaggagat accaaatctg cttctgcccg cgataagagc
    29041 cgcgccattc gcggcgcacc cagttgttcg gcacgtcgta acgcagccag tcgcgcgtcc
    29101 gcccgacgat tttgacgtgt tgcggcagaa gtccgacttc ttcgtaaagc tcgcggtaca
    29161 tcgcggtttc ggggctttcg cccggcttga tgccgccttg cggaaactgc caagaatgtt
    29221 cgcgcacgcg cttaccccaa aagacttcgt cgcggttgtt ggttaagatg ataccgacat
    29281 tggggcgata gccttctctg tccaacacgg tgtcgccctc cgttaaattc aatcttggga
    29341 ttttcccaca aatcgaacgg ttttgacaaa tcagacggta tggttcaagc atgtcgaaac
    29401 acggacggat tcgggaaaat atcttaaatt tggtttacaa taatgtgttt caaattaatt
    29461 cgggaatcag accatgttag atatccaatt gctccgcagc aacaccgccg ccgttgccga
    29521 acggcttgca cggcgcggtt atgactttga taccgcacgt tttgacgcac tggaagaacg
    29581 acgcaagtcc gttcaggtga aaactgaaga actacaagcc tcgcgcaaca gcatttccaa
    29641 acaaatcggc gcactgaaag gtcagggcaa acacgaagaa gcgcaggcgg cgatggatca
    29701 agtcgcccaa atcaaaaccg atttggaaca ggctgccgcc gatttggatg ccgttcaaaa
    29761 agaattggac gcatggttgt tgagcatacc taacctgccg cacgaaagcg tacctgccgg
    29821 taaagacgaa accgaaaacg tcgaagtccg caaagtcggc accccgcgcg aatttgactt
    29881 tgaaatcaaa gaccatgtcg atttgggcga acctttgggt ttggatttcg aaggtggcgc
    29941 gaaactttcc ggcgcacgat ttaccgtgat gcgcggacaa atcgcccgcc tgcaccgtgc
    30001 gctggcgcaa ttcatgctcg atacgcacac gctgaaacac ggctacaccg agcattacac
    30061 accctatatc gtggacgaca ccaccttgca aggcacgggt cagctgccga agtttgcaga
    30121 agatttgttc cacgttaccc gtggcggcga cgagagcaaa accacgcaat atctgattcc
    30181 gacagctgaa gttaccctga ccaataccgt tgccggcagc attatcccgt ccgaacaact
    30241 gccgctgaag ctgaccgcgc attcgccctg tttccgcagc gaggcgggtt cgtacggcaa
    30301 agacacgcgc ggtctgattc gccagcacca gttcgacaaa gtggaaatgg ttcaaatcgt
    30361 tcatcccgaa aaatcatacg aaacgctgga agaaatggtc ggccatgccg aaaacatcct
    30421 gaaggctttg gaactgccct accgcgtgat taccctgtgt accggcgaca tgggcttcgg
    30481 cgcaaccaaa acgtatgatt tggaagtttg ggtgccggcg caaaatacct accgcgaaat
    30541 ctcaagctgc tccaactgcg aagatttcca agcccgccgc atgaaggcgc gtttcaaaga
    30601 cgaaaacggc aaaaaccgct tggtacatac tttgaacggc tccggcttgg ctgtcggcag
    30661 aacgctggtc gccgtattgg aaaaccatca aaacgccgac ggcagcatca acatccctgc
    30721 cgcactgcaa ccgtatatgg gcggcgttgc caagttggaa gtgaaataag tttgcaagct
    30781 gcctgaacgt caaatgccgt ctgaaacctg gttcagacag catttccttt aaacttttaa
    30841 aacacgtcag ccgtcggcac gaaccgcatt gccgcaatcg ccgatctgtc cgacctcgcg
    30901 gatattggac agcgtaactt ccgaaatatt acccaacgcc tcttccgtca aaaacgcctg
    30961 atgaccggta aacagcacgt tatggcagga cgacaggcgg cggaacacgt cgtcggtaat
    31021 cacatcgttg gatttgtctt caaaaaacaa ttcgcgttcg ttctcgtaca cgtccatacc
    31081 caatgcgccg attttccggc gtttcaacgc ctcaatcgcg gcagaactgt caatcagccc
    31141 gccacggctg gtgttgataa tcatcacgcc gtctttcatt ttgtcgaacg ccgcttcgtt
    31201 cagcatatag tggttttccg gcgtggaggg gcaatgcagc gtgatgatgt ccgaccgggc
    31261 atacagctcg ttcaactcca catacctgcc gccgattttt tccgcttcgg ggttgcaaaa
    31321 cggatcgtaa gccagcaggt tcatgccgaa accctttaaa atccgcatgg ttgcaatacc
    31381 gattttcccc gtgccgataa cgcccgccgt tttgccgtac atattgaaac cggtcagacc
    31441 ttccagcgaa aaattcgcat cgcgggtacg ctgataggct ttgtggatac ggcggttcaa
    31501 cgtcagcatc agaccgaccg tatgttccgc aaccgattcg ggcgaatagg caggcacgcg
    31561 cacgactttc aagcccaact cttcagccgc ctttaaatcc acattattga agccggcaca
    31621 acgcaacgcc acagttttca cgccaatttg cgccaatttt tccaacacgg gccggctgcc
    31681 gtcgtcgttt acaaaaatac agaccgcttc cgcgccttcc gccattttcg ccgttttcgc
    31741 atccagcata aaatcaaaaa actccagctc gaagccgaaa tgccggttgg cgcgggtaaa
    31801 atgttcgcgg tcatagcttt tcgtaccgta aatcgcaatc ttcatcaata tgtccagttg
    31861 tcgcctatgg ttgagaaacg gcataataca ctgaattcaa acaaatcagt agaatatggc
    31921 agattaaaat tgattgcatg cacggcattt ccatttcaaa acacaaaact caatcgccca
    31981 ttgccgccag aagctccgcc tgatgctcgg caatcagggc attggtgatt tctgccaagt
    32041 cgccgtccat cacaaaatcc agcttgtgca gggtaaggtt gatgcggtgg tctgttaccc
    32101 tgccttgggg atagttgtag gtgcggatgc gttcgctgcg gtcgccgctg ccgatgaggg
    32161 atttgcgttc ggcggcttct ttggcttggg cttcgcgttt ttgcgcgtcg ttcaggcggg
    32221 cggcgaggac tttcatcgcc tgcgctttgt tggcgtgttg gctgcgcccg tcttggcact
    32281 cgaccaccat gccggtgggc aggtgggtga tgcggacggc ggagtcggtt ttgttgatgt
    32341 gctgaccgcc cgcgccggat gcgcggaagg tgtcgatgcg caggtcggct gggttcagtt
    32401 cgatgtcttc cagttcgtcc gcttcgggca tgacggcaac ggtgcaggcg gaggtgtgga
    32461 tacggccttg gctttcggtg gcggggacgc gctgcacgcg gtgtccgccc gattcaaatt
    32521 tcaaacggct gtacgcgcct aagccgataa tacgggcgat aacttcttta tagccgccca
    32581 actcgctttc gttggcggac acgatttcaa cctgccagcg gttgcgttcg gcgtagcggc
    32641 tgtacatacg cagcaaatcg ccagcaaaca gcgcggcttc gtcgccgccc gttccggcgc
    32701 gtatttcgat gaagatgttt ttgtcgtcgt cggcatcttt gggcagcagc agtttttgca
    32761 gttcggtatc gagttcgccg attttggctt tcgccgcttc gatttcttcg gcggcaaagt
    32821 ctttcatttc ggggtcggac aacatttctt cggcatccgc caagtcgctt tgggcaagcc
    32881 gatagttttg gaacacttcg acgacggggg tcagttcagc gtgttcgcgc gtgagcttgc
    32941 ggtagttgtc catatcggac gtggcttcgg gttgccctaa aaggtgggta acttcttcca
    33001 accggtcgcc gagttgttgc agtttttcta agatagacgg cttcataatt cttccataac
    33061 aaacgccgcc tgaatttcag acggcatcaa cactgaatta ttataatagg ttttccggac
    33121 attcaaaaag ataatctcag atggataacc taccgtccca acagggcatc ggcattgcgc
    33181 tccgttacct tggcaatctc ttccacacag gttccgcgga tttccgcagc aatctttgca
    33241 atacccggaa tattggcagg cgtattaatc tcttttttca gcataaacgg gctgtcggtt
    33301 tccaatacga aatccccgtc gttcaaggct ttaagcgtat cgcgcacttt acgtgcgttc
    33361 ggattgagca acaacgaacc gatgccgatt ttgaaaccca gtttcgtcaa cacgcgcgct
    33421 tcttccgcgc tgcctgagaa ggcgtgaacg atgccgcctt gggcaaagcc tgtctgtttg
    33481 acggcggcgg cgatgtcggc ggtggctttc agattatgga taatcacgcg gcggcgcagg
    33541 gtttgcgcga tttcaagctg gcggacgaaa acttggattt gccgttcgcg ctgcggcggc
    33601 gtttgggttt tgtcgtaaaa atccaagccg atttcgccga cccatgctgt cggatgcgct
    33661 ttcaatgttt gttccaaaag ctggaaatcc ggttcggaaa cgtcgtctga aaaccaagga
    33721 tggatgccga gcgcgatatg gatattgccc caaagcggat tttcagacaa cctttgagcc
    33781 aaatccgcca cgtcctgcca atcctgcggc cgagtcgcgg gaacgataaa ccgccctacc
    33841 cctgcctccc gcgctgcggt caggatgtgc ggcaggtttt cgcgcagggc ggcatcggca
    33901 aggtggcagt gggtgtcggt gaagttcatt tcgattccgc aatgcggcag gttcacataa
    33961 aaataaggca gggcggcaag ggatgcagtg tacgggcggc gcataaggcg cggtcaacgc
    34021 cccgtcattg ccatttcaat ccgctataac ttcagtcttg ccaactcttt ttccacctct
    34081 tccttacccc agccttgcga tacggcgagg gtcataagcg cggtggcggt ttcgaggttg
    34141 catttgccgc cgttgatgat gcctgagttg cggaacgcgt tgccttgcgc gtaaacggca
    34201 gcggttctgc cttgtcggac ttggctgatg ttgagcagca gtttgccttg ctgcgtaaag
    34261 tcttgcacgg cgcggatgaa accttcgtct gcgggcgtgt tgccgtgtcc gtagctttgc
    34321 aggataaggg cttgggcggg aagctgtccg agtccgtcgg caagttcttg gacggcaaag
    34381 ccggggataa gcgtgcggac ggcgattttt gcctgcgggt caggatagcg gattttgagg
    34441 ccgtctgaaa cggccgccgc atcttgggac ggaatacgaa gattgtacca gccttgagtt
    34501 tcatcccatt cggcgatgac accgaaatgc ggattgtcga aaccggcggc ggtttcggtg
    34561 ctgactttgc tgctgccgac ggcgggataa agtttgccgt caaaggcaat aagcgtctgc
    34621 ttcaatccga gtgggaatgc ggcaacggca gtcgccagat tgcgcggcgc gtcgctgccc
    34681 acggcgttgt acggccattg ggaaccggtc aggacgatcg gcttgtccaa accctgcagc
    34741 gcgagggcga acagattggc ggtataggcg agcgtgtccg tgccgtgcag caccaaaacg
    34801 ccgtcgtact gcggcagcgc ggcggcaatg atgtccagcc aagcgcacca gttttgcagt
    34861 tggacggcgg aagaatcaat cagcgtccca caaacgtgcc aatcgaaatc catgccgttt
    34921 gaaaacggcg cgagtgcctg cccgaccagc gcggtatcgg ggcgcaggcc ttcgctgctt
    34981 tgcgtcatgc cgatggtgcc gccggtataa aggacaaaaa ttttctgttt catggctcat
    35041 cctgaaaatg caaagaccgc ctgaaacgcg aaatgcgtcc ggacggtcga aaatctgatt
    35101 tactgctgct tctgtgccgc ttttttcgct gccttttccg ccttgcgttt ggcgcgtttt
    35161 tcgctcaatt gtgcgcggta aagctgataa tgtcggcgtt tgcgccacca gaaccacgcc
    35221 agcgccgccg ccagcacgcc caatgcgatg aagatgccgg attgcaggct gtgcattttc
    35281 gccatcagcc aatcgatgtt gtgcgcgccg tactcgccca agtaaatcca aacgggcacg
    35341 gaaatcagcg cggcaagccc gtccataatc agaaagcgca gatacgatac tttgcggctg
    35401 atgccggcgg taacgaaaac ggcagtccgc aaaccgggca ggaaacgagc gacaaataac
    35461 acccagttgc cgtatttgtc gaatttttcc tgaacctgtg cgtaacgttt cggcgtcatg
    35521 atgcgcgcaa tcggtttgaa cttgaggatt ttctgccccc agatgcgtcc ggcggcgaac
    35581 atgatgccgt ccccgaccaa tacgccgagc ataccgactg caaacataat atgcggattg
    35641 gtataaccca tacccgaaat cacgccgcct gttaccaagg tcaaatcctc ggggatcggc
    35701 acgccgaaac cgcagatgac caaaacgaaa aacacggccg catagccgta ttcgacaaaa
    35761 aaggcttcca aaagggcaaa catagcggat attccattgt cggagataaa aagtcagaac
    35821 aagccgaaac attttctgcg cgaaacggca ttctatcaaa gattatgccg tctgaaagcg
    35881 gcaaggggca gattcgcgcc ctctgccgga cgttcagacg gcatttaaac aggaaaaccg
    35941 ccgctgttga aacggttttt cctgattttg cctaaaggct gccgatggcg gaagcaatac
    36001 gttccgcccc ttcgtgcgcc caatcggcct gtcgtgcctc aaccatcact cgcacgacgg
    36061 gttcggttcc cgaagcgcgc aacacaaccc ttcctttgcc ttcgagttct ttttccactt
    36121 ccgccaacac gtcttttgag gcttcctgcc atttctgacc cttttggatg cgcacgttaa
    36181 tcatagtttg cggatacggc tgccagtcgg cgcaaacggt ggcgaggtct tggttcagga
    36241 tttgcagcgc cgccaaaact tgcagcgcgg aaataatgcc gtcgccggtg ttgtgtttgt
    36301 ccatgcacaa aatatggccg ctggcttcgc cgccgatgag ccagccgcgt tggttcagct
    36361 gttccaacac atagcggtcg ccgactttgg cgcggcagaa atcgacgccc tgctctttca
    36421 gggcgatttc catcgccata ttggtcatga ccgtgccgac cacgccgccg atgttgatac
    36481 cttctcgggc gcgggctttg gcaatgacgt aaatcaggct gtcgccgtcg taaaccttac
    36541 cgtttttatc gaccatcatc aggcggtcgc cgtcgccgtc taaggcgatg ccgtagtcgg
    36601 cttcatgctg taaaacggct gcctggagtg tcttggtata agtcgcaccg catttttcat
    36661 tgatattgta gccgttgggt tcgtcgccga tgctgacgac ctgtgcgccc agttcgtgaa
    36721 acaccttggg tgcgacaccg taccccgcgc cgttggcggt atcgataacc aacttcaaac
    36781 cccgaaggtc ggaatggctg ggaaaggtgg atttgcaaaa ttcgatatag cggtcgtccg
    36841 caccgctgat gcggcgtgcg cgcccgaggc gtgcagaagg ctgggttttc atttcttcgt
    36901 cgattttggc ttcgatttcc aactcgattt catcggaaag cttcacgccg ccctcggcaa
    36961 agaatttaat gccgttgtcg gaataggcat tatgcgacgc ggaaatcatc acaccggcgg
    37021 acaaacgcag cgcgcgggtc agataagcca cgccgggcgt aggcagcgga ccggtttgga
    37081 taacgttaac acctgcggcg gtaaaacccg ccaccaaagc ggcctccagc atatagccgg
    37141 aaatccgcgt atccttgccg attaaaacag tcggtttctg gtcggtgtcg tgctgaacca
    37201 aaacctgacc cgccgcatag ccgagtttca atacaaaatc gggcgtaatc ggaaattgcc
    37261 ccacttcgcc gcgcacgccg tccgtgccga aatatttttt tgccatgtgt tgctccgaga
    37321 atgtgaaccg ttgtccgaga ttatacagtc agtttgtgcc ttgctgtctg caccgttgat
    37381 gccgtctgaa gccgccccgt ccttttcaga cggcatgaag tatgtgaacc gctgtttaca
    37441 gattgatgcc caacgcttcc cacgccttca aagcatccgc cgtcgccttc acatcatgca
    37501 cccgcacaat ttgcgcgccg cgcgccacgg aagccagcgc cgccgccacg ctgccgtgta
    37561 cgcgtgccgc cgcgtctgcc tcaccggtca gctcgcctat catgcttttg cgcgatacgc
    37621 cgattagcaa tggcaaaccg gtttccgcca tcaattcggg taaatgccgc atcagtgcga
    37681 tattgtgttg cagggttttg ccgaagccga aacccggatc gagcgtgatg cgttgcggtg
    37741 cgatgcctgc cgcaatacat tccgccgccc gcgctttcaa ataccgcgcc acttcaccga
    37801 caacatcctg atatttcgga ttaatctgca tgtttttagg caaaccctgc atgtgcatca
    37861 ggcaaatacc cgtgtccgtc tggcgcgcca gcaattcgag cgcgccttcg tcggtcaacg
    37921 ccgccacatc gttaataata tcgatgccgc cgagtgccaa tgcttttttc ataaccaccg
    37981 tgcggcgcgt gtccaaactg acgggaacgc cccacccagc cacttccgcc aatacaggct
    38041 caacccgcgc ccattcttct tcaggcgaaa cataatccgc acctggccgc gtcgattcac
    38101 cgccgatgtc gagaatgtcc gcaccctctt tcaaaagccg ttcggcatgc gccaaagcgg
    38161 tttgggcgtt ttgcgaatac acgccgccgt cggaaagaga atcgggcgtg agattcacga
    38221 tacccatgat tttcggtttg tccaaaccga tttcaaaccg tcctgcctgc caaacgcatc
    38281 cgaccatatc cgtgcctccg gaataaaaag caaattatat gccgtctgaa caaaacttgt
    38341 ccatttcaga cggcatcggt atttcaaaaa agcatcttgc agaatccgcc gccgtatgaa
    38401 acatacactt cccctgcaaa cgcggcaaca cccgcgatac ctgatccggc ggtatgcctg
    38461 cttatgggca ttaccccttt atacaagata atccgcccgc acaaaatagg attgccgcaa
    38521 gccgtgttat actgtggcgt gttttacaga cttttcaggc tatggattta ttatcggtct
    38581 tccacaaata ccgtctgaaa tatgcggtag ccgtgctgac gatactgctt ttggcggcag
    38641 tcgggctgca cgcttccgta tatcgcacct tcacgcctga aaacatccgc agccgcctcc
    38701 aacaaagcat tgcacacaca caccggaaaa tctcgtttga tgcggacatt cagcgcaggc
    38761 ttctgccccg gccgaccgtc atcctgaaaa acctgaccat taccgaaccc ggcggcgacc
    38821 ggactgccgt ttccgtccaa gaaaccaaaa tcggattgag ctggaaaaac ctgtggtcgg
    38881 atcagataca gattgaaaaa tgggtggttt cgagtgcgga acttgccctg acgcgcgacg
    38941 ggaaaggtgt ttggaacatc caagacctga tcgacagcca aaaacgccaa gcctcagtca
    39001 accgcattat cgtcgaaaac agcaccgtcc gcctcaattt cctgcagcaa cagcttatcc
    39061 tgaaggaaat cagcctcaac ctgcaatccc ccgattcgtc ggggcagcag tttgaaagtt
    39121 cgggcatact ggtttggaga aagctgtccg tcccgtggaa aagcaggggg ctgttccttt
    39181 cagacggcat cggcacgccc gaaatctcac cgttccattt tgaagcttcc acttcgctgg
    39241 acggacacgg catcaccatt tccaccaccg gcagcccttc tgtccgcttc aacgccggcg
    39301 gagcggatgc cgccggcctc ggcctgcgtg cagacacttc cttccgcaac ctccacctga
    39361 ccgcgcaaat ccccgcattg gcactcaaaa acaacagcat caaaaccggc acggtcaacg
    39421 gcacgtttac cgccggcggc gaatatgccc gatgggacgg ttcgttcaaa ctcgacaaag
    39481 ccaacctgca ctccggcatc gccaacatcg gcaacgccga aatctccggc agcttcaaaa
    39541 caccgcgcct tcaaaccaat ttctccctcg gctcgccgtt ggtttggagt cgggacaacg
    39601 ggctggacgc cccgcgcctg cacatatcga cccttcagga taccgtcaac cgcctgccgc
    39661 aaccccgttt catcagccgg ctcgacggtt cgctgtccat accgaatctg caaaattgga
    39721 atgccgaatt aaacggcaca ttcgaccgcc aacccgttgc cgcaaaattc aaatatacgc
    39781 gggaaggcgc accgcgcctg gaagccgccg ccgcgctgca aaaattaaac cccgccccct
    39841 atcttgacga atttcggcaa caaaacggca aaatattccc cgacatcctc ggcaggctgt
    39901 ccggcaacgt cgaggcacac ctcaaaatcg gcagcatcca actccccggc ttgcaactgg
    39961 acgatatgga aacctacctc cacgccgaca aagaccatat cgcgctcagc cgtttcaagt
    40021 cagggcttta cggcggccat accgaaggcg gcatcagcat cgccaacacc cgtcccgcca
    40081 cttaccgcct gcaacagaat gcaagcaaca tccaaatcca accgctgctg caagacctgt
    40141 tcggcttcca cagcttcagc ggcaacggcg atgcggtcat cgacctgacc gcaagcggcg
    40201 aaaaccgcaa acagcttatc cgctcgctgc aaggcagcct gtcgctgaat atttccaacg
    40261 gcgcgtggca cggcatcgat atggacagca ttttaaaaaa cggcctttcc ggaaaaatct
    40321 cgggcagcac acccttctac cgattcacgc tcaacagcga aatttcagac ggcatcagcc
    40381 gccacatcga taccgaactc ttctccgaca gcctctatgt taccagcaac ggctatacca
    40441 atctggatac gcaggaattg tctgaagatg tccttatccg caacgccgtc catccgaaaa
    40501 acaaaccgat tcccctgaaa atcaccggta cggtggacaa gccgtccatt accgtcgatt
    40561 acggcaggct gaccggcggc atcaattcgc gcaaagagaa acagaaaatc ctcgaagaca
    40621 ccctgctgga acaatggcag tggctcaaac ctaaagaacc gtaaataccc tgcgtacaaa
    40681 aatgccgtct gaaacacatt aatcttcaga cggcatgacc gtaaaaccta caaccccaat
    40741 ttcccccaaa tcccatcaat tttaaccgta accgcagggt cttttttgat tacccgtccc
    40801 cattcgcggt cggtttctcc cggccatttg ctggtcgcat ccaaacccat tttgccgccg
    40861 agtccgctga cggggctggc gaagtcgagg tagtcgatgg gcgtgttttc caccaaaaca
    40921 gtgtcgcgca cggggtccat gcgcgtggtt accgcccaga tgacttcttt ccagtcgcgc
    40981 acgtttacat cgtcatccac cacgatgatg aatttggtgt acataaactg gcgcaggaac
    41041 gaccagcagc ccgtcatcac gcgcttggcg tgtccggcgt actgtttttt catgctgacc
    41101 accgccatgc ggtaggaaca gccttcgggc ggcaggtaaa aatcggtgat ttcggggaac
    41161 tgcttttgca agagcggtac gaacacttcg ttcaatgcca cgcccaaaac agcgggttca
    41221 tcgggaggtt tgcctgtgta ggtcgaatgg taaatcgggt tttcgcgcat ggtgatgcgc
    41281 tcgaccgtaa atacagggaa atgatcctgc tcgttgtaat agccggtgtg gtcgccgtat
    41341 gggccttcca acgcggtttc gttcggatga atcacgcctt ccaatacaat ttcagcacgg
    41401 gcaggcactt gcaaatcgtt gccgatacat ttcaccagct ccgtccgcga accgcgcagc
    41461 agtccggcaa actggtattc gctcaaagta tcgggaacag gcgttaccgc tccgagaata
    41521 gtggcagggt cgcaaccgag cacgacggcg acgggatacg gcgtatcggg attgagtttg
    41581 cggaactcct gataatccaa cgcgccgccg cgatgcgaca gccagcgcat aatcagcttg
    41641 tttttgccga tgagttgttg gcggtaaatg ccgagatttt ggcgtttttt gtgcggccca
    41701 cgcgtgacgg tcaagcccca tgttaccagc ggcgcaacgt cttccggcca gcaatgctga
    41761 atcggaagtt tatacaaatc aacgttttcg ccttcccaca cgatttcttg acacggcgcg
    41821 tttttcacca cgttcggcgc catgctccaa atgtctttca gcagcggcag tttggaaaac
    41881 gcatctttga tgcctttggg cggttcgggt tctttcaaat acgccagcgt ctgcccgatt
    41941 tcgcgcagct tggacacgct gtccgcgccc atgcccatcg ccacacgttc gggcgtaccg
    42001 aacaggtttg ccaacacggg ataaccgtag cgcgtaccgt cgggcttaac cgggttttca
    42061 aacagcaacg ccggcccttc ggcgcgcagc acgcggtcgg cgatttcggt catttccaaa
    42121 tgcggggaaa cggggtgcgc gatgcgtttg agtttgccct gctgctcgag catggcgatg
    42181 aagtcgcgca ggtctttgta tttcatattc atcctttttg tccttttatc ctgagcaatc
    42241 cgattcggat accgccccta tccttgcctg tgcctcggca tattctatgc cgtgataaaa
    42301 gtcgcgtacc agcggatgtc cgccgctttg atgaagttgc agcaaagggc gttgaccatc
    42361 gggttgggta acgacattgc aatgcaaacc gaaggtgtcg gattcgtaag ggggcagccg
    42421 gttgcagatc atcccgaaat aaacggcgtt ttcagagttg tcgtaaaagc ggctttgata
    42481 gtcgttaaaa ctcttttcgc tgacggacac ccacacgccg tattccagcg tttcctcatg
    42541 cccgataatc ggaataggca gcgccgcgcg gataaagcgg tcggtttggt cggaatagcg
    42601 gatgatgcag aaatcagaat cgcattccgc ttgataagca atgcgttctt cttcactgag
    42661 ttgattatag ggataggggg cggtaaagcc ggttgcgggc atatcttcat gtttttcgcc
    42721 gcaggaagtg caagtgtgca taaggtttca gactttcaac acaagtttgc ggtaaagcca
    42781 ttcgccggca aacagcatcc ccatcaatac ataggcaatc acgcctgtat aaaccgccca
    42841 ccaatcatat cgccccaacc gggccaacaa agcggcaagc gtcccgttgg caataaagaa
    42901 tacgcaccaa acctgcgtta cccggcgggt atagcgcacg gctttttcag gcaggtcggg
    42961 ctgttgcagc cgcgcaagtt tttcaatcac cgtctgcccg gcaaacaggc tgctgccgaa
    43021 caccgccaac atcatcaaat taacgaggac aggataccaa tacattgaat cacgccgccc
    43081 gaacaccaat actgcggcaa aaaacagtgt aataaacaaa gccgcataac gctgttgggg
    43141 cagtttggca gtcagggcgc gcagcagcca caacccgcac atcgccgccg ccagccagac
    43201 aaaccagccc gcctccctgc cgtaatatag tggattaaca aaaaccagta cagcgttgcc
    43261 tcgccttgcc gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat
    43321 accacaaagc gggataggca atgcttaata cggtcagaaa aatatgtccg aaaaaaccgg
    43381 gtttcatttt gaatccgcac aaatgttttc agacggcatc cgataaaaac atgccgtctg
    43441 aaaaataatt agaaataccc gattagcccg cctgaatctt caataccgcc tgtaccacgt
    43501 cgttgacggt gcggacattg cggaaatctt cagcctgcag cttgcgggct gccacagcca
    43561 ttcacgattg cgatataccc ggcggcattc ccgactgccg ttcagcagaa agcgcaccca
    43621 ttccaaaccg ctccaatatg cctcgggcag cataccggct tcagacggca tatcgtccga
    43681 agcagataaa gtcaggctgt aacgcgtccc tttggtcaga accatcgcca aagcataagc
    43741 aaacggcgcg cgcgttgccg atacggcata tccttccggc agcggatcgt ccgccgccaa
    43801 aaccaaaacc gacccgcatc cctcttccaa cagtgatgcc gcttccgcca atgccgtttc
    43861 cacaccgtcg gcacacacgg ccaatgccgt ctgctcgctc atatcccgcc tcaatatcga
    43921 ccattacccc gccgttgcat tgtgcaccga caaaccgaac gaagtcggcg acacggtttg
    43981 cgatttcaac agttccaacc acaaatcgaa actgcgcgcc atttccccgt cgtgcgaggc
    44041 ataaactata gtggattaaa ttttaggggc tgtactagat tagcagatat gttaccc
//
LOCUS       DAWGBY010000004        42020 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.004, whole genome shotgun sequence.
ACCESSION   DAWGBY010000004 DAWGBY010000000
VERSION     DAWGBY010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 42020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42020
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.004"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(405..1511)
                     /locus_tag="WHG62_000196"
     CDS             complement(405..1511)
                     /locus_tag="WHG62_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ1724370.1"
                     /translation="MKIKALMIAAALLAAADVHAAPQKAKTASAKAAKAAKAAKAAKA
                     AKAAKVAKVAKVAKVAKVAKVAKVAKVAATAQKEAAPAQQQGGIRFSDGIAAVADNEV
                     ITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEI
                     DAVVAKNPALKNLSPAQRRDFADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGI
                     TLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDAS
                     AGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQER
                     IRNSVRQYIFQQKAEQATVNLLSDLHSGAYVDIR"
     gene            complement(1616..4024)
                     /locus_tag="WHG62_000197"
     CDS             complement(1616..4024)
                     /locus_tag="WHG62_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ1724371.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVQGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMEIEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVNRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            4094..5098
                     /locus_tag="WHG62_000198"
     CDS             4094..5098
                     /locus_tag="WHG62_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ1724372.1"
                     /translation="MQRQIKLKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDFGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            complement(5155..5853)
                     /locus_tag="WHG62_000199"
     CDS             complement(5155..5853)
                     /locus_tag="WHG62_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ1724373.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLTNPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            6057..7595
                     /gene="murJ"
                     /locus_tag="WHG62_000200"
     CDS             6057..7595
                     /gene="murJ"
                     /locus_tag="WHG62_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ1724374.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLWAAQACLPFEWVRAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVEN"
     gene            7727..8683
                     /locus_tag="WHG62_000201"
     CDS             7727..8683
                     /locus_tag="WHG62_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HEZ1724375.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPTYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRSRGWHGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGERGENALPQAAA
                     AVSAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKARSLHGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAVNDPFLPPEALPRADEVSEAV
                     TLFQPTHGGHVGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            8734..9516
                     /gene="trpC"
                     /locus_tag="WHG62_000202"
     CDS             8734..9516
                     /gene="trpC"
                     /locus_tag="WHG62_000202"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ1724376.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQVREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDETELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRADDIEAEVGKLF"
     gene            9582..11882
                     /gene="recQ"
                     /locus_tag="WHG62_000203"
     CDS             9582..11882
                     /gene="recQ"
                     /locus_tag="WHG62_000203"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ1724377.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGKQEAIVNALAVGESLMVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEVIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNTADFSHNAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHSVLSDESLADMLADTPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKHKRRLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
     gene            complement(11919..13220)
                     /locus_tag="WHG62_000204"
     CDS             complement(11919..13220)
                     /locus_tag="WHG62_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HEZ1724378.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLYEYLEEYPFITRLCLENHGQTVLDFSNTRITDLSVDMTGVE
                     SLYLNEGLDSLNLKGEIKENCKVCTAEKGAGLILEVGKSVPKVRGLENLTAVNVMGIA
                     DFDMQNLSETYPKLKTIRLWGKPGNIANFSAVSGFEDLEVFTTVDLFGFGADDIPHPD
                     RLPKLHRLWMSSLPEEAAKAVKKLYKKRKEDGLDLWIEKARKPEWLAQNFDNPFRDWD
                     GAEHISKSHAKKAAELYRKTRAGVVKLLGNPPENIGEELAEAVKAYTGGFNKMDKKHF
                     IDTVEREDIAEALETILNLIPEGSCADKEKLFEIFDKNRNF"
     gene            complement(13525..13950)
                     /locus_tag="WHG62_000205"
     CDS             complement(13525..13950)
                     /locus_tag="WHG62_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724379.1"
                     /translation="MNELNGRILSVKGLFFIYDETDLDIDVQRPDEIQFDLEGIPVLF
                     KCNGSEPNLSYEINKEAENVSLGSYGELKIFDLTDFDFFGFLKDEDLLEMRKLYLDDD
                     EIGFRLIFSQSVLNMINWGDEFFLFKNLPEFLINENLHE"
     gene            complement(13961..14779)
                     /locus_tag="WHG62_000206"
     CDS             complement(13961..14779)
                     /locus_tag="WHG62_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ1724380.1"
                     /translation="MNPQDKCWQVHRHLAEHADQRLTLVRNAPKHILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAVRKGGFWQRFTGKGVVQHCQSPTAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALETDGLLFFTCFGRDTLAELKCRLKENGIESRSA
                     LFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMSWNDENAA
                     RSCVGTIFEREGGLGITLETVYGHAVKKLMLPQGENVVQFFPKNGLTNPSVKKG"
     gene            complement(14781..15695)
                     /gene="bioH"
                     /locus_tag="WHG62_000207"
     CDS             complement(14781..15695)
                     /gene="bioH"
                     /locus_tag="WHG62_000207"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ1724381.1"
                     /translation="MCLKHRGQLFAASVRYAAKSAAQPAQMPSETPDEPWHNTQRLIV
                     GASAMRRQQERKSMPDAVKKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGDA
                     PFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARL
                     TAAEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTHDADRIIGRILPDLARC
                     GTPSALQEALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRLV
                     VMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            15751..16248
                     /locus_tag="WHG62_000208"
     CDS             15751..16248
                     /locus_tag="WHG62_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ1724382.1"
                     /translation="MWASLHYEPPVSNMIHALKHLADLSMVQPLADLMMQNPPDRLAD
                     ECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKG
                     GERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELAKTLKKLGANRICCWTLVR
                     TPMKK"
     gene            16313..16777
                     /gene="trmL"
                     /locus_tag="WHG62_000209"
     CDS             16313..16777
                     /gene="trmL"
                     /locus_tag="WHG62_000209"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ1724383.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVYENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            16788..16910
                     /locus_tag="WHG62_000210"
     CDS             16788..16910
                     /locus_tag="WHG62_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ1724384.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            16907..17626
                     /locus_tag="WHG62_000211"
     CDS             16907..17626
                     /locus_tag="WHG62_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ1724385.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGKSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAASTSSPNLAIEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMIQTVLTAG"
     gene            17680..18006
                     /locus_tag="WHG62_000212"
     CDS             17680..18006
                     /locus_tag="WHG62_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ1724386.1"
                     /translation="MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            18088..18672
                     /gene="ruvA"
                     /locus_tag="WHG62_000213"
     CDS             18088..18672
                     /gene="ruvA"
                     /locus_tag="WHG62_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ1724387.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            18672..18809
                     /locus_tag="WHG62_000214"
     CDS             18672..18809
                     /locus_tag="WHG62_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724388.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            18835..20691
                     /locus_tag="WHG62_000215"
     CDS             18835..20691
                     /locus_tag="WHG62_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ1724389.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALIFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVAWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRTQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VNDGMATLSKPHTILDKPNALPLKVSQGEIKFEHVDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGITQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            20696..21619
                     /gene="rsgA"
                     /locus_tag="WHG62_000216"
     CDS             20696..21619
                     /gene="rsgA"
                     /locus_tag="WHG62_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ1724390.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSMRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGKIRTERLTFLQRITDDLLK"
     gene            21647..21733
                     /locus_tag="WHG62_000217"
                     /pseudo
     CDS             21647..21733
                     /locus_tag="WHG62_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233463.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
     gene            21731..21955
                     /locus_tag="WHG62_000218"
     CDS             21731..21955
                     /locus_tag="WHG62_000218"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ1724391.1"
                     /translation="MKKNAPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGLKELNLESDE"
     gene            21939..22835
                     /locus_tag="WHG62_000219"
     CDS             21939..22835
                     /locus_tag="WHG62_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ1724392.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHVQYDEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLDGARAYAYQLTDEAVSLL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(22944..23243)
                     /locus_tag="WHG62_000220"
     CDS             complement(22944..23243)
                     /locus_tag="WHG62_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ1724393.1"
                     /translation="MTASMYILLLLALIFANAPFLTTRLFGIVPLKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(23355..24800)
                     /gene="nuoN"
                     /locus_tag="WHG62_000221"
     CDS             complement(23355..24800)
                     /gene="nuoN"
                     /locus_tag="WHG62_000221"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ1724394.1"
                     /translation="MNWSDLNLMPAMPEVALLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDDECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPTVGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            complement(24810..26306)
                     /locus_tag="WHG62_000222"
     CDS             complement(24810..26306)
                     /locus_tag="WHG62_000222"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ1724395.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFAAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AVIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIYGAIHNPHVAEM
                     KDINCREFAILAILAVVVLGMGLYPQAFIEVVHQAANDLIAHVAQSKI"
     gene            complement(26416..27579)
                     /locus_tag="WHG62_000223"
     CDS             complement(26416..27579)
                     /locus_tag="WHG62_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ1724396.1"
                     /translation="MTQLFLHSDTPNEKELISIYEKAVSEAVELYIFSAYLTHWDVKN
                     KLNSKLQEFKFIFGQDFGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKN
                     DKNEYYALIGSSNLTHAAFNSNYEANILTKISEQDFIKVKSWADEIAMKSIPVSEDWL
                     EEYQEAEINYKKSTVSQSLMDKLFMEMPNYNQELIAARRKQMRNHQTVCNQLKSLIKQ
                     CAAGKIDNDEFYVEFNKLWSWKSENKGEGVGNRFQDQTWKRTGKSSDFRKLCIAIQSV
                     FDAPLAERDNVVAKQIDWLKECGVSTRGSVFSEMLCQEYPDRYPVLNAPIKKFLEKNK
                     FKSAKGASEGSRYIDLSMKLRALLAMQSEIKNLAELDVLVQAEYRDSTDIDWE"
     gene            complement(27763..29787)
                     /gene="nuoL"
                     /locus_tag="WHG62_000224"
     CDS             complement(27763..29787)
                     /gene="nuoL"
                     /locus_tag="WHG62_000224"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ1724397.1"
                     /translation="MTDMTLYLIIALMPLVGCLLAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFIDGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLILFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDNHHGEEHHGLGKNDNPHESPLVVTLPLILLAIPSVIIGYVAI
                     EPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLTSPVLYLAAAGVAAAWL
                     LYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            complement(29839..30453)
                     /locus_tag="WHG62_000225"
     CDS             complement(29839..30453)
                     /locus_tag="WHG62_000225"
                     /inference="COORDINATES: protein motif:HMM:NF013933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEZ1724398.1"
                     /translation="MLISILLTYILTVFVFLLMPGPVNLVVVNAAAKYGLKGAFFAVV
                     GTNAASLVLIISAGLMIAGLGNVNNKFLTWLSVLGGLYLIYYGWKIWADSRKINHENK
                     QEQTISELSKLMVNSFMVGISNPKDVIFFMTFFPPFVQKMDMALLPSLLVLTIIWCVL
                     DYGILLAYGLGISKIMTPKREKIINIFCAILFIGIGIYAVFQAV"
     gene            complement(30447..31232)
                     /locus_tag="WHG62_000226"
     CDS             complement(30447..31232)
                     /locus_tag="WHG62_000226"
                     /inference="COORDINATES: protein motif:HMM:NF020466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcI/YcgG family protein"
                     /protein_id="HEZ1724399.1"
                     /translation="MANNFENNQFDFQFLVKQSNINLLEYPDWINIATSELVTTLNQE
                     LFPCVFARRANNLENLLFAFIETDICTEYTSNYDLESLLNTLLEYTRFCKEIIAKDRL
                     YFPLILIFNFQLDTLEASQNKAWEILKQIFQFNQDNFNDEDVLNPNQAGWKFRFNGVN
                     LFFNINHPQHILHKSRNVNSYLTMVVNPSENFLIVAPVVNGERKISNLIRDRVKQYNN
                     GIIADTLSINDDTKPDWKQYQHEEGNVKLPLICPFSNMEKSKC"
     gene            complement(31357..31662)
                     /gene="nuoK"
                     /locus_tag="WHG62_000227"
     CDS             complement(31357..31662)
                     /gene="nuoK"
                     /locus_tag="WHG62_000227"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ1724400.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTIDVTELNSLKG"
     gene            complement(31659..32330)
                     /locus_tag="WHG62_000228"
     CDS             complement(31659..32330)
                     /locus_tag="WHG62_000228"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ1724401.1"
                     /translation="MTFSAILFYILATIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLASFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTVNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            complement(32342..32821)
                     /gene="nuoI"
                     /locus_tag="WHG62_000229"
     CDS             complement(32342..32821)
                     /gene="nuoI"
                     /locus_tag="WHG62_000229"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ1724402.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            complement(32902..33978)
                     /gene="nuoH"
                     /locus_tag="WHG62_000230"
     CDS             complement(32902..33978)
                     /gene="nuoH"
                     /locus_tag="WHG62_000230"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ1724403.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            complement(33981..36242)
                     /locus_tag="WHG62_000231"
     CDS             complement(33981..36242)
                     /locus_tag="WHG62_000231"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ1724404.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIIQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVHSAIKCIAKDGNQNQVGVWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGIKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLASSKEELFMPLLSQEAVHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLNVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRQQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQIAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            complement(36532..36969)
                     /locus_tag="WHG62_000232"
     CDS             complement(36532..36969)
                     /locus_tag="WHG62_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724405.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICWKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINEL"
     gene            complement(36969..38270)
                     /gene="nuoF"
                     /locus_tag="WHG62_000233"
     CDS             complement(36969..38270)
                     /gene="nuoF"
                     /locus_tag="WHG62_000233"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ1724406.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFESALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            complement(38660..39133)
                     /gene="nuoE"
                     /locus_tag="WHG62_000234"
     CDS             complement(38660..39133)
                     /gene="nuoE"
                     /locus_tag="WHG62_000234"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ1724407.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMDTGEYLKKK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCGFMTEEAIEKKLAELE"
     gene            complement(39133..40389)
                     /gene="nuoD"
                     /locus_tag="WHG62_000235"
     CDS             complement(39133..40389)
                     /gene="nuoD"
                     /locus_tag="WHG62_000235"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ1724408.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVTPERAMQKGFTGVMLRGSGVEWDVRKKQPYEMYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            complement(40379..40972)
                     /locus_tag="WHG62_000236"
     CDS             complement(40379..40972)
                     /locus_tag="WHG62_000236"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ1724409.1"
                     /translation="MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVPVYNSADWYEREAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            complement(40985..41467)
                     /locus_tag="WHG62_000237"
     CDS             complement(40985..41467)
                     /locus_tag="WHG62_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ1724410.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            complement(41458..41814)
                     /locus_tag="WHG62_000238"
     CDS             complement(41458..41814)
                     /locus_tag="WHG62_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ1724411.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
BASE COUNT        10124 a        11554 c        10666 g         9676 t
ORIGIN      
        1 ttcgcgggaa tgacggcata gaggtttctg ttttcccgat aaattcctgt tacttttcgt
       61 tgctagattc ccgcctacgc gggaatgacg atggaaagat tgttgttgct tcggataaat
      121 ttctgcagtt ttaaataacc ggattcccgc ctgctcggga atgacggcat aggttttttt
      181 gtttttccga taaattacca caacccaaaa tcccgtcatt cccgcgaaag cgggaatcca
      241 gtcctttaaa ctccagccat tcccgataaa ttcctgttgc ttttcgtttc cagattcccg
      301 ctttcgcggg aatgatgaat gacggtgtaa aagtaactcg aaatccaaaa agccataccg
      361 cccggatttt tgccgatcgg tatggctttt tgcttcaaac cgccttagcg gatgtcgaca
      421 tacgcgccgg aatgcaggtc actcaacagg ttgacggttg cctgttcggc tttttgttgg
      481 aagatgtatt gccgcacgga attgcggata cgttcctgag gtgtgccggc atcgcgcact
      541 tcgttcaatt tgatgatatg ccagccgaat tgggtgcgga cgggcgcgcc gacctgtccg
      601 ggtttgagcg cgtggacggc ttcttcaaag gcgggaacca tcacgccgtc ggcaaaccag
      661 cccaaatctc cgccgttgcc cgcgctcgcg tcttgcgaat attggcgcgc taggctggaa
      721 aagtctgtgc cgctgcgggc ctctccgtag attttgcgga tggtgctttc cgcgccgacg
      781 gcggcgtttt cgctgtcggc tttaatcagg atgtgttggg cgcggtattg gcgcaacggt
      841 gcgccttcgg gcagggtgat gccttgtttt tgcgcctgct cgaggaaggc atcgatttca
      901 gcttcgctca cgcggctgtt ctgcatcact gcctgctggc ggactttttc ggcaatgatg
      961 ttgtcggcaa aatcgcggcg ttgggcgggg ctgaggtttt tgagggcggg attttttgcg
     1021 acgacggcat cgatttccgc ttcgcttgct tgaatgttgc ggcgtttgcc cgcctgtaca
     1081 atcagggatt ggttgacaag ctgcatcagc acctgtcggg acagctcgga ttcgcttatc
     1141 tgcgcgtctt tgggcaggtt ggctttggct tcggcaacgg cttcggcaag ccggcggcgc
     1201 gtgatgactt cgttgtcggc aacggcggca atgccgtctg aaaagcggat accgccctgc
     1261 tgttgtgcgg gtgcggcttc tttttgcgcc gtggcggcaa ctttggcaac tttggcaact
     1321 ttggcaactt tggcaacttt ggcaactttg gcaactttgg caactttggc agctttggca
     1381 gctttggcag ctttggcagc tttggcagct ttggcagctt tggcggatgc ggtttttgcc
     1441 ttttgcggtg cggcgtggac atcggctgct gccagcaatg cggcggcaat catcagggct
     1501 ttgattttca tcattctttc cttatcgttt gaatcctacc tttgatggcg ggtttggggt
     1561 tgtcggtgga atgccgtctt gttcgggaac ggtgctcctg ccgggtttcc gacggtcagg
     1621 gtcgtttgtt gcgtccggcg gaaagagagt gagcggggat atagccggga acggcgacat
     1681 ccatcctgtc tgcggggttt ctgccgacac tgctgaggtc tttcaactga agtgagaaaa
     1741 agacagcgtt tttgtaggtg ttttcgccgg taacgtagcg ttgggcgtac acgcccgcgc
     1801 cccagcagcc gcaactgctt ttgtattccg cacccgccag cacctctatc ggttttttgg
     1861 cttcaaaacc gtagttgtaa cggacgacgg ccgacaggtt gcgcgtcagc ggccattgtg
     1921 cggacaggtc gagctggctg agtttgtcgt aaaaatagga accgtcggac ttcaggtaga
     1981 ttttttcgtt gcgcccgtat ttgtagcggg cgttcagcac tttgccctgt gcgggacggt
     2041 agcttgcacc gacggcgtag ttctcggcgc gtttgtcgtt ttggttgtag tggatgctgc
     2101 tgtcgaggat gaagcggctg ccgatgctgc cggaggcaaa tgccacccag tcggaacggt
     2161 tgcgcggttt tttgccgacg ctgccgtcaa gcatcaccgc atcatccttg aaatagaatt
     2221 tctgaccgat gccggcgcgg aaacgctctt cccccgtcgc gccgtccaaa atacggcttt
     2281 gcacggcggc ggaaaggctg tttgcggtgt taatcctgtc gttgccgtaa tagaggtttt
     2341 cgcgaaagag ctgcccgtag ccgaagctgc tttccgacga atcgaaattg ggcaggtcgt
     2401 tttgggattt ggcaggaata tagttgtaga acaggcgcgg ctcgagggtt tgcaggactc
     2461 cgccgccgaa catccgcgta ttccgctcaa aagttgcgcc gctgtcgatg ttgacaatgg
     2521 gcagagtgcg gttgacgcgt cgggcttctt ggctgccgaa gcggttgagg ctgtaatagg
     2581 tggcgtgcag tccgagtttg ggacggacgt aaccccagct gttgctgaaa tcccatttga
     2641 tgtcgggata gacgacgagg cggctgccgt cttggcggct gtcgtggctg aagcgggtaa
     2701 attgtgcgga cacgccgatt tgcgccctgc cggtgttttt gcgccaatcg gcggaaaggc
     2761 gcggcatcag ggcatacggt ttgtctttgt agccgctttg gtttgccagc gtctggtatt
     2821 tcagaaccga aaggccggca ttcaggctgc cgcccgccgc cctgccgcca taatccagcc
     2881 atacacggcg gttgaggttg acgttgccgg cgatttcttt gttgccgtaa aagtcgcggt
     2941 agtagccgct gtcggagact tggttgaaat cgacacccgc ctgaagcgtg tcggaaatgt
     3001 cgtgccgatg ctgccatttc gcctgatagc ggttattcct gccgcttttt ttgtcgtgcg
     3061 gcagccaggt caggtcggac tggccggcat aatccggccg caggtagcgt acctgcccgt
     3121 caaagaccgc gccgcgttcg ccgatcacgc cgggcgcgaa cgtggcatcg agattggggg
     3181 caaggttgaa ataataggga acggaaaggg aaacgccgtc cgaaccggcg gacagtgagg
     3241 gaacaagcag gccgcttttg cggttgccgt caagcgggaa gtccgcccaa ggcgtataga
     3301 aaaggggaac gccgccgaac acgaaggcgg cgtgtttggc aacgcctatg cctttttccc
     3361 gatcggcttc gacagaggct gccttgacat accagccggc atcgccggcg gaacaggtgt
     3421 tgaattgggt ttccgtcagt ttgtaatgcc cttcgcccaa catttcggcg gtgcggctga
     3481 cgctttgcag ccgccgtccg ccttgttcga tttccatgcg gacgttgtgc gcttcgccgg
     3541 tctgctgctc gagattgtag gtcagggttt cgccccgaat cagcgtaccg tcctgttgga
     3601 gggcgaaccg gtcgcctgcg gtaacggtgt cgcccgactg gtcgtaatcc gcccaatcgg
     3661 tattgagggt cgtccggttg cgttcgacga cgacgttgcc ttcggcacgc acctgcacct
     3721 gcgactgtcc ttccaccttg tcggcaacaa tgcgcgtata gtcttcgggg atggatgctt
     3781 cgccgctgcc ttggacggcg gcttcggttc tctcggggct gccgctttcg ttactgcaaa
     3841 acaggcaggt cgaaccgagg ctcaggctgg taggctgtat gggttcggac acgctccgaa
     3901 cgcttcctcc ggcggtcgga ttgtccgttt cctccgccgc aacggcatcg gcggcggcgc
     3961 aatgcgtgcc gaagcagagg cccaatgcca gcaccagtgg tttgagtgaa aataaacgag
     4021 ccaaaatcgc ccctcaagtc ggtttgccag ttagaatagc gtttattgta acctgaaatg
     4081 ctttagtact gttatgcaac gacaaatcaa actgaaaaat tggcttcaga ccgtttatcc
     4141 cgaacgggac ttcgatctga cttttgcggc ggcggatgct gatttccgcc gctatttccg
     4201 tgcaacgttt tcagacggca gcagtgtcgt ctgcatggat gcaccgcccg acaagatgag
     4261 tgtcgcacct tatttgaaag tgcagaaact gtttgacatg gtcaatgtgc cgcaggtatt
     4321 gcacgcggac acggatctgg ggtttgtggt attgaacgac tttggcaata cgacgttttt
     4381 gaccgcaatg cttcaggaac agggcgaaac ggcgcacaaa gccctgcttt tggaggcaat
     4441 cggcgagttg gtcgaattgc agaaggcgag ccgtgaaggg gttttgcccg aatatgaccg
     4501 tgaaacgatg ttgcgcgaaa tcaacctgtt cccggaatgg tttgtcgcaa aagaattggg
     4561 gcgcgaatta acattcaaac aacgccaact ttggcagcaa accgtcgata cgctgctgcc
     4621 gcccctgttg gcgcagccca aagtctatgt gcaccgcgac tttatcgtcc gcaacctgat
     4681 gctgacgcgc ggcaggccgg gcgttttaga cttccaagac gcgctttacg gcccgatttc
     4741 ctacgatttg gtgtcgctgt tgcgcgatgc ctttatcgaa tgggaagaag aatttgtctt
     4801 ggacttggtt atccgctact gggaaaaggc gcgggctgcc ggcttgcccg tccccgaagc
     4861 gtttgacgag ttttaccgct ggttcgaatg gatgggcgtg cagcggcact tgaaggttgc
     4921 aggcatcttc gcacgcctgt actaccgcga cggcaaagac aaataccgtc cggaaatccc
     4981 gcgtttctta aactatctgc gccgcgtatc gcgccgttat gccgaactcg ccccgctcta
     5041 cgcgctcttg gtcgaactgg tcggcgatga agaactggaa acgggcttta cgttttaaac
     5101 ccaatcaaaa tgccgtctga aaaccaagtt tcagacggca tttttcaaac gggcttactg
     5161 cgcggctttt tgttcttcgc gtactttgtc cgccaaaagg tcgatggtgt tcataccgga
     5221 ctcccagtcg gcaaattcga ctttatattt gccgccgacg ataaccgtgg gcgtaccgtc
     5281 gatttggaag gtttcggtca gctcctgcat tttgtcggcg cgcgcctggc tttcgggaga
     5341 ttcgtaagcg gcaaggactt ttttgccgtc aaaggcggtt tgttcgccca gccatttttt
     5401 gaggacttcc ggctcttgca gcttaatttt ctgattaacc atcgcatcga aaatatggct
     5461 gttcgccaca tctttgctgt cggcggcagc catatcgacg gcggcggcga ggcgtgccag
     5521 cgtcagcatt tctttctgcc agacgacgtg ttcggtacgc aggtacatat cgtctttaaa
     5581 agacttggcg tgtttgctta aaacaggttc gaggtgggcg cagtgcggac agaaatagcc
     5641 gaaaaactca aggacttcga ctttgcctgc ctgctgttgg ggaatcgggt tggtaaggac
     5701 ggtatagttt tgcccttcga ccagccctgc cggggcggcg gctgccgaag cggcaggcgc
     5761 gctgtcggcg gggacgctgg tttggacttt gctgtcgcac gcggcaaggg cgaacagggc
     5821 ggcaacgccg agggcgaggt gtctggattt catacggctc tccgtgatgt tggaaataaa
     5881 tcggatattg gtattttatt gtattttcgc gtgttgatac agtttgccgc cggaaaagga
     5941 agctttcgtt tcgggaaacc gcttcagacg gcatcaaacc cgatgccgtc tgaagcggtt
     6001 tctgtcgtac aatacgcgcc gttgccccaa acgggtacga ctgttgagga acaatgatga
     6061 atatgctggg agctttggca aaagtcggca gcctgacgat ggtgtcgcgc gttttgggat
     6121 ttgtgcgcga tacggtcatt gcgcgcgcat tcggcgcagg catggcgacg gatgcgtttt
     6181 ttgtcgcgtt caaactgccc aacctgcttc gccgcgtgtt tgcggagggg gcgtttgccc
     6241 aagcgtttgt gccgattttg gcggaatata aggaaacgcg ttctaaagag gcgacggagg
     6301 cttttatccg ccatgtggcg gggatgctgt cgtttgtgct ggtcatcgtt accgcgctgg
     6361 gcatacttgc cgcaccttgg gtgatttatg tttccgcacc cggttttgcc aaagatgccg
     6421 acaaatttca gctctccatc gatttgctgc ggattacgtt tccttatatc ttattgattt
     6481 cactttcctc ttttgtcggt tcggtactca attcctatca taaattcagc attccggcgt
     6541 ttacgcccac gtttctgaac gtgtcgttta tcgtattcgc gctgtttttc gtgccgtatt
     6601 tcgatcctcc cgttaccgca ctggcatggg cggtttttgt cggcggcatt ttgcaactcg
     6661 gcttccaact gccctggctg gcgaaactgg gttttttgaa actgcccaaa ctgaatttca
     6721 aagatgcggc ggtcaaccgc gtcatgaaac aaatggcacc tgcgattttg ggcgtgagcg
     6781 tggcgcagat ttctttggtg atcaacacga ttttcgcgtc ttatctgcaa tcgggcagcg
     6841 tttcatggat gtattacgcc gaccgcatga tggagctgcc cggcggcgtg ctgggggcgg
     6901 cactcggtac gattttgctg ccgactttgt ccaaacactc ggcaaaccaa gatacggaac
     6961 agttttccgc cctgctcgac tggggtttgc gcctgtgtat gctgctgacg ctgccggcgg
     7021 cggtcggact ggcggtgttg tcgttcccgc tggtggcgac gctgtttatg taccgcgaat
     7081 tcacgctgtt tgacgcgcag atgacgcaac acgcgctgat tgcctattct ttcggtttaa
     7141 tcggcttaat catgattaaa gtgttggcac ccggcttcta tgcgcggcaa aacatcaaaa
     7201 cgcccgtcaa aatcgccatc ttcacgctca tctgcacgca gttgatgaac cttgccttta
     7261 tcggcccact gaaacacgtc ggactttcgc ttgccatcgg tctgggcgcg tgtatcaatg
     7321 ccggattgtt gttttacctg ttgcgcagac acggtattta ccaacctggc aagggttggg
     7381 cggcgttctt ggcgaaaatg ctgctctcgc tcgccgtgat gggcggcgga ctgtgggcgg
     7441 cgcaggcttg cctgccgttt gaatgggtac gcgccggcgg aatgcggaaa gcggggcagc
     7501 tctgcatcct gattgccgtc ggcggcggac tgtatttcgc atcactggcg gctttgggct
     7561 tccgtccgcg ccatttcaaa cgcgtggaaa actgaccgat gccgatatcc tttttcggca
     7621 aacgcttttc cacgcctata ttcgggcgcg catcccccac gtccgcacca gccggacggg
     7681 ctgccgcatc atcaatgccg tctgaaaaca agaaaaccga taccttatga ttttaacacc
     7741 gccggacacg ccctttttcc tccgcaacgg caatgccgac acgattgccg ccaaattcct
     7801 gcaacgcccc gcacccacat accgccgcga gctgcttccc gacagcacgg gtaaaaccaa
     7861 agtcgcctac gatttttcag acggcatttc gcccgatgcg ccgctggtcg tgctgtttca
     7921 cggtttggaa ggaagcagcc gcagccatta cgcggtcgaa ctgatgctcg cggtacgcag
     7981 ccgcggttgg cacggcgcag tcgtccattt ccgcagctgc ggcggcattg ccaacaccgc
     8041 tccggtgttc taccacttgg gcgataccgc cgaaatcgcc tttactttgg acacgcttgc
     8101 cgcgcgttac cgtgaaatat acgccgtcgg cgtatcgctg ggcggcaacg cgctggcaaa
     8161 atatttgggc gaacggggcg aaaacgcgct gccgcaagcc gctgccgccg tatccgcccc
     8221 cgtcgatgca gaggcggcag gcagacgctt cgacagcggc atcacgcggc tgctctacac
     8281 gcgctacttc ctccgcaccc tgatacccaa agcacggtcg ctccacggtt ttcagacggc
     8341 atttgccgca gggtgcaaaa cactgggcga gtttgacgac cgtttcaccg caccgctgca
     8401 cggctttgcc gatcggcacg actactaccg ccaaacttcc tgcaaaccgc tgctcaaaca
     8461 cgttgccaaa ccgctgctct tgctcaatgc cgtcaacgac cccttcctgc cgcccgaagc
     8521 gctgccccgc gcagacgaag tgtccgaagc cgttaccctg ttccagccga cacacggtgg
     8581 tcatgtcggc tttgtcggca gcaccggcgg caggctgcac ctgcaatggt tgccgcagac
     8641 cgtcctgtcc tatttcgaca gcttccgcac aaacaggcgt taacggtttg atgctaatat
     8701 tccccctttc cccagacgaa tacggaacac gacatgaccg acatcctcaa taaaatcctt
     8761 accgccaagg cacaggaagt tgccgcccaa aaagccgccg tcaacgccga acacatccgc
     8821 gcacttgccg cagaagccgc gcccgtccgc agcttcatcg attcgatacg cggcaaacac
     8881 cgcctaaacc tgcccgccgt cattgccgaa atcaaaaagg caagcccgag caaaggcctg
     8941 atccgtccgg acttccgacc tgccgagatt gcccgcgcct atgaaaacgc cggggcggcg
     9001 tgtttgtccg tactgaccga cgaaccctat ttccaaggtt cgcccgaata cctcaaacag
     9061 gtgcgcgaag ccgtatcgct gcccgtgctg cgcaaagact tcatcatcga cgaatatcag
     9121 gtttatcagg cgcgcgcatg gggggcggat gccgtcctgc tgattgccgc agcactggaa
     9181 caggaacaat tggaacgctt tgaagcggtg gcgcacgaat tgggcatgac cgtcctgctc
     9241 gagctgcacg acgaaaccga attggaaaaa tgccgcaacc tgaccacgcc gttgtggggc
     9301 gtaaacaacc gcaacctgag gacttttgaa gtctccctcg accaaaccct gtcgctgctg
     9361 cccgcactgg aaggcaaaac cgtcgttacc gaaagcggca ttacgggcaa ggcggatgtg
     9421 gaatttatgc aatcgcgcgg cgtgcacacc ttcctgattg gcgaaacgtt catgcgtgcc
     9481 gacgatattg aggcggaagt gggcaaactc ttctaaatct cgatttcaga cggcatattg
     9541 ccgccgacca atcgacaccc attaccggac acggaaccat catgcaccga cccaccgcca
     9601 aacagattct gcacgaagta ttcggttatc ccgaatttcg cggcaagcag gaggctatcg
     9661 tcaatgcttt ggcagtcggc gagagtttga tggtgctgat gccgacgggc gggggcaagt
     9721 ctttgtgtta ccagattccg gcgctgatgc gcgaaggcgt ggcggttgtc gtatcgccgc
     9781 tgattgcgct gatgaacgac caagtggcca gcctgcatgt ggccgggatt gaagcggcgg
     9841 cagtcaacag cggcacatcg gcagacgagg cgcgcgagat tgccgataag cttgcccaag
     9901 gccgtctgaa gctgctttat gtcgcgccgg aacgcctagt taccgaccgc tttttgcgtt
     9961 ttctcgacca acaaaccgtc agcctgttcg ccattgatga ggcgcattgc gtcagccaat
    10021 ggggacacga tttccgcccc gagtaccaac agctcggcat gcttgccgaa cgctatccga
    10081 acgtcccgcg catcgccctg accgccaccg ccgatgccgc cacgcgcgcc gacatcaagc
    10141 attatctgca cttggacgat gcgcccgaat ttatctccag ctttgaccgc ccgaatattt
    10201 attatcaggt tatcgaaaaa aataatggca aaaaacaact gcttgaattc atccgcaaag
    10261 aaatgacggg gcaaagcggc attgtgtatt gcctaagccg caaaaaagtc gaagatgtgg
    10321 cgcagttttt gcgtgaaaac ggattaaacg cgattccgta tcatgccggt ttgagcatgg
    10381 acgtgcgcga ggaaaaccaa cgccgcttta cgcatgaaga taatattatc gtggtggcga
    10441 ccgtggcgtt cggcatgggc atagacaaac ccgacgtgcg ctttgtcgcc catctcgata
    10501 tgccccagag tgtcgaacat ttctatcagg aatcggggcg tgccggccgg gacgggctgc
    10561 ctgccgcgag ctggctgtgt tacggtttga acgattgggt gttgctgcgc gaacggattg
    10621 ccgaaggcaa cagcgacgag gtgcaaaagc aaatcgaaat gcaaaaactc gatgccatgc
    10681 tttccgtctg cgaaaccgcc gcctgccgcc gcgtactgct gctcaaacat ttcggcgaag
    10741 aatccgaacc ctgcggccat tgcgacaact gcctgcatcc gcccgtacgg tttgacggca
    10801 cggtgttggt gcaaaaatta ctcagctgcg tgtaccgcgc cggacaacgt tttgccgccg
    10861 gttacatcac caaccttttg cgcggcaaaa gcgacgattg gatacgcggc aaccggcacg
    10921 aacaactgtc caccttcggc atcggtacgg agttgtccga caaagaatgg cgcagcgtca
    10981 tccgccagtg tatcagcctc ggctacctca ccgtcaacat tacccgatat caggcattgc
    11041 aactgaccga agccgccaaa aaagtcctca aaggcgaaac cgaagtgatg ctgcgtccgc
    11101 tcaagcgcga caagcccgcc gcccgcaccc tcaaagacaa ctggctgcgt accgaacgcg
    11161 aagaacgcct gtggcaggca ttgcgcgttt ggcgtatgaa acaggcagaa gccgaagtca
    11221 tccccgccta tatgattttc ggcgacaaaa ccctgcgcga ccttgtcgaa aaaatgccgc
    11281 aagacctcaa cggactgcac gacatctacg gtttgggcga agccaaaatc gaccgtttcg
    11341 gacacggcat cctcgaagtc tgccgcaaca ccgccgactt tagccacaat gccgtcatcc
    11401 gcccgcaaac cgaacgcgaa caacaactgc gtcaaaaact cgaagcctgg cggtatgaac
    11461 aggcaagggc ggaaaactgc gccctgcatt ccgtcctctc cgacgaaagc cttgccgata
    11521 tgcttgccga tacgcccgaa accgaaaccg acctcgaagg cgtacacggc ttgggcagcg
    11581 tacgcgccgc caaatacgga cgggacatcc tcgccgtctg ccgtccgttt tcagacggca
    11641 tcgatgaagc cgccaaacac aaacgccgcc tgatgcgcgc cctgattcaa tggtgcaacg
    11701 aaacggcaaa acacgaacag tccgaaccct accgcattct cagcaaagcc gccctgcgcg
    11761 ccattgccgc caaacagccg gaaggcttgg cggagcttgc cgccgtatac ggcgtaggcg
    11821 aagaaaaagc cgcacgttac ggtgcggcgg tgttggcggt attggaacga aatgccgtct
    11881 gaagcccgtt accaagtttc agacggcatt gcctctgttt aaaaattcct atttttatca
    11941 aatatttcaa acagtttttc cttgtcagca caagacccct ccggtattag gttcaatatc
    12001 gtttccaacg cctcggcaat atcttcccgc tctaccgtgt cgataaagtg ttttttgtcc
    12061 attttgttga aacctccggt ataggctttg accgcctctg ccagctcctc tcctatgttt
    12121 tcaggcggat tgccgagcag tttgaccacg ccggcacggg ttttccggta cagctccgcc
    12181 gcttttttgg catggctttt cgagatatgc tccgcaccgt cccaatcgcg gaaggggttg
    12241 tcgaaatttt gcgccagcca ttcgggtttt cgggcttttt ctatccacag gtctagaccg
    12301 tcttccttcc gtttcttata aagtttcttc actgccttcg ccgcctcttc gggcaggctg
    12361 ctcatccaca gcctgtgcag cttcggcagc cggtcgggat gcgggatgtc gtccgcgccg
    12421 aaaccgaaca aatctacggt agtgaacact tccaaatcct caaatcccga tacggcggaa
    12481 aaattggcga tattgcccgg tttgccccac agccgtatgg ttttgagctt gggatacgtt
    12541 tccgacaggt tttgcatatc gaaatcggca atacccataa cgttgacggc ggtcaggttt
    12601 tccaaacccc gcactttggg aacgcttttg cccacttcca aaatcagacc cgcgcccttt
    12661 tcggcggtac agaccttgca gttttccttg atttcgcctt tcaggttcag gctgtccaag
    12721 ccttcgttca aataaagcga ttccacgccg gtcatatcga cagaaaggtc ggttatgcgc
    12781 gtattgctga aatccagcac ggtctgaccg tggttttcca gacacaatcg ggtgataaac
    12841 ggatattcct ccagatattc atatagattt ttatgccatt tggtcagaaa cagcgaagac
    12901 aggcagggaa acgccttcag ttccatcgcg tcttcaaaat cgtcccaaac atcgctcaaa
    12961 ttctgtttgg atatgccgta ttcccgtccg gcaaacatca cggtcttttt gcttttggcg
    13021 gcttttttga atgcctttct ctgtttttcg ggtatctgct gccatctcaa ctgacggtac
    13081 acgtcgtagc cgtcgcccca aaaagaggca taccgttgcg tgtcttcgcc gaccagcggc
    13141 gcggtattcc caacccgtac atatcccgtc ggcacgacgg cacttgcctt atacatgtgc
    13201 agaccacgtt cccaatacat aaagtctttg taaagcggtt tcaaatccgc cagttccgcc
    13261 gccccaagcg gtttgttgcc ctgccagtcc aaagccagca gggtcgcacg tgttttttgc
    13321 caccgtgttc ttcaactcgg gtaacctggc aggcagtgta ctgcttcagt ctgatgttat
    13381 agacgcaata tacgtctccg gcatcggcat acatcggcat ttcctttatt tctgtcggtt
    13441 ttcacagata aatgccgtct gaaacctgaa accggcttca gacggcatct gcacatcatc
    13501 ttatctagta cagcccctaa atttttattc atggagattt tcatttatta aaaattcggg
    13561 taagttttta aacaaaaaaa attcatctcc ccaattaatc atattcaaca ctgattggga
    13621 aaaaattagc cgaaacccga tttcatcatc atcaagatat agttttctca tttccaatag
    13681 gtcttcatct ttaaggaaac caaaaaaatc aaaatcggtt aaatcgaata ttttaagctc
    13741 tccataacta cctaaagata cgttttcagc ttccttgttg atttcataag acagattcgg
    13801 ttcgctgcca ttacacttaa ataaaacagg gatcccttcc aaatcaaact gtatttcatc
    13861 gggacgttgg acatcaatat caagatccgt ttcgtcatat atgaagaaaa gcccctttac
    13921 tgataaaatc cttccattta actcattcat ttatttaccc ttatcccttc tttactgatg
    13981 gattagttaa gccattcttc ggaaaaaact gcaccacgtt ctccccctgc ggcagcatca
    14041 gttttttaac ggcgtgtccg tacaccgttt ccagcgtaat gcccaaaccg ccttcccgtt
    14101 caaatattgt cccgacacac gaacgcgcgg cgttttcatc gttccacgac atcgcccgcc
    14161 aaacgcccag cgtgtccata tccgcccaaa acgtttccgc ctttttgtaa tccaacacca
    14221 gcttcgccgt atcggtaacg gggtcgtaaa acccgttttc agcaagcata tcgcccaagt
    14281 cgtgcatatc ggggaaaagc gcgctgcggc tttcaatgcc attttctttc agacggcatt
    14341 tcagttccgc caaggtatct cgcccgaagc aggtgaaaaa cagcagcccg tccgtctcca
    14401 gcgcgcgcgc ccagttgtgc agcacaggaa ggatttgttc cgccgccaac agtccgagat
    14461 tcgaccacaa catatcggca cacgcttcgg gcagcggcgc ggtcggggat tggcagtgtt
    14521 gcaccacgcc cttacccgta aacctttgcc aaaaaccgcc cttgcgcacg gctgcggcag
    14581 ccgccaaaaa atccgcacgg gaatcgtatt cttcaaatac cgcctgcgga tatcgtttcg
    14641 ccagcaggct gcggctgatg tccgcatccg ccccggcaag caggatatgt ttgggcgcgt
    14701 tgcggacgag tgtcagccgt tggtcggcat gttcggcaag atggcggtga acctgccaac
    14761 atttgtcctg cggattcatg tcaaacccct tcgacaaagt cgcggtacag cgcggcaaac
    14821 gcttccgcat ggctcaaaaa cggcgcgtgt gccgcctttt ccatcacaac cagcctgctt
    14881 cctttcaaat gccgatgcag atactcaccc atacgcggcg gtgtaatcgc gtctttgccg
    14941 ccgaacacca gcagtaccgg aacatctatc ttgtccaaca aatgccgcgc atccgccctt
    15001 tccgccgcgt ccaaagcttc ctgtaaggcg gagggcgtgc cgcagcgcgc caaatcgggc
    15061 aggattctgc ctatgattct gtccgcatca tgcgtgtgca aaagctggag ttgtagaaac
    15121 tgtttgatat gtttggcata atccgttcgg aacgcgccga ccattttgcc caatgcaggc
    15181 gcggcaagcc cttcgggata atcttcggca gccgtcagcc gtgcgaaact cgccgtcagg
    15241 cagagcgaac ggactttgtc gggatggcgc gccgccagat acagcgcgac caatccgccg
    15301 agcgaccagc cgagaatgtc ggcgggcgta tcgatttgtg cggcaacagc gtcggcggct
    15361 gcctcaatat cgaagggttg cgcgaagggc gcgtcgccgt gtccgggcaa atcgacggcg
    15421 gacaccggcc acgttgcagg caggcgcggc atcaaatcgt cgaacacgtg gcggttcgcc
    15481 ccccaaccgt gtatcaggta aacttttttg acggcatcag gcatggattt tctctcttgt
    15541 tggcggcgca tcgcagacgc gcccactatc aggcgttgcg tattatgcca cggttcgtcc
    15601 ggcgtttcag acggcatctg cgccggctgc gcggcggatt tggcggcata ccgcaccgac
    15661 gcggcaaaca gctgccccct gtgtttcaga cacatccaag gcggcgcggt gtgcggcggc
    15721 tgtcagaaaa aaccgcccgc attcgaccgg atgtgggctt cgctgcatta cgaaccgccc
    15781 gtcagcaata tgatacacgc gctgaagcac ttggctgatt tgagcatggt gcagccgctg
    15841 gcagacctga tgatgcagaa tccgcccgac cggcttgcag acgaatgttt cgatttcgtc
    15901 ctgcccgtac cgctaagcag ggagcggctg ctgcaacgcg ggttcaacca aagtgaaagc
    15961 atcgtcgggc tgctggcaca acgctacggc tggcagatac tgccccgaca caccgttttc
    16021 cgacaccacc gcccgccgca aagcacgctc aaaggcggcg aacggcggcg aaacatcaaa
    16081 aacgcctttg aaatccgcac accgataccg gaaaactgta atattctgtt aatcgacgat
    16141 gtctttacca ccggcgcgac gctggacgaa ttggcaaaga cgctgaaaaa attaggcgca
    16201 aaccgcatct gctgctggac gctggtacgc acgccaatga aaaaataact aaattttttg
    16261 acaccccatc cgccttgtgg caaggttacg cgcctataag tgattgatat ttatgtttac
    16321 catcgtttta taccaaccgg aaatcccccc gaacacgggc aacatcatcc gcctgtgcgc
    16381 caataccggc gcggatttgc accttgtcaa accgctcggc ttcccattgg attccgccaa
    16441 aatgaaacgc gccgggctcg actaccacga attcgccagc ctgacggtgt acgaaaactt
    16501 cgacgactgc ctcaaggcac tcgcaggcag gcgcattttc gccctgacca ccaaaggcac
    16561 ggcgcgcccc gatgaaaccg cgtttcaaaa aggcgacgtt ttactgttcg ggccggaaac
    16621 gcgcggactg cctgccgaca tcctcgacag cctgcccgcc gcgcaaaaaa tccgcctgcc
    16681 gatgcagccc ggcagccgga gtatgaacct ttccaatacc gttgccgtga ttctctttga
    16741 agcgtggcgg caacacggtt acgcaggcgg cgtttgaacg caagttcatg ccgtctgaaa
    16801 acctatccgg acacattccg aaccgccgtc cgcactgtac ggcggttcgg aacgtatccg
    16861 gcgggcatga tgcccattcg tcttcaactc aagaacggaa cacgttttga ctttaacccg
    16921 aaaaaccctt ttccttctca ccgccgcatt cggcacacac tcccttcaga cggcatccgc
    16981 cgacgcagtg gtcaaggcag aaaaactgca cgcctccgcc aaccgcagct acaaagtcgc
    17041 cggaaaacgc tacacgccga aaaaccaagt cgccgaattc acgcaaaccg gcaacgcctc
    17101 gtggtacggc ggcaggtttc acgggcgcaa aacttccggc ggagaacgat acgatatgaa
    17161 cgcctttacc gccgcccaca aaaccctgcc catccccagc tatgtgcgcg taaccaatac
    17221 caaaaacggc aaaagcgtca tcgtccgcgt caacgaccgc ggccccttcc acggcaaccg
    17281 catcatcgac gtatccaaag ccgccgcgca aaaattgggc tttgtcagcc aagggacggc
    17341 gcacgtcaaa atcgaacaaa tcgtcccggg caaatccgca ccggttgccg aaaacaaaga
    17401 catctttatc gacttgaaat ctttcggtac ggaacacgaa gcacaagcct atctgaacca
    17461 agccgcccaa aacttcgccg cttcgacatc aagcccgaac ctcgccattg aaaaacgccg
    17521 ttacgaatac gtcgtcaaaa tgggtccgtt tgcctcgcag gaacgcgccg ccgaggccga
    17581 agctcaggcg cgcggtatga ttcagacggt attgaccgcc ggttgatgtc ccgcctttac
    17641 gtctttcaaa caccaccaga tacttcgcag gagcaaaaca tgaacttcaa acgccttctc
    17701 ttgaccgccg ccgcaaccgc actgatgggc atttccgccc ccgcactcgc ccaccacgac
    17761 ggacacggcg atgacgacca cggacacgcc gcacaccaac acagcaaaca agacaaaatc
    17821 atcagccgcg cccaagccga aaaagcagcg ttggcgcgtg tcggcggcaa aatcaccgac
    17881 atcgatctcg aacacgacaa cggccgtccg cactatgatg tcgaaatcgt caaaaacgga
    17941 caggaataca aagtcgttgt cgatgcccgt accggccgcg tgatttcctc ccgccgcgac
    18001 gactgaattt gatacaatcc gtgccgtctg aagcccgaac cggtttcaga cggcattttg
    18061 cacccgacac ttcaggattc ggcatacatg atcagcagac tgaccggcaa actggttgaa
    18121 aaaaaccctc cgcaaatcgt catcgatgtc aacggtgtcg gctatgaggc cgacgtatcg
    18181 atgcagacct tctacaacct gccgcccgtg ggtgaaagcg tacaactgtt tacccagctt
    18241 atcattcggg aagacgcaca tcttttattt ggttttgcca ctgcggaaga acgcaagacc
    18301 ttccgccaac tgattaaggt cggcggcatc ggcgcgaaaa cggctttggg cattttgtcg
    18361 gcgatgacgg cagacgagct ggcgcgggcg gttgccgaag aagacgtgaa acgcctgtct
    18421 tccgcgccgg gaatcggcaa aaaaaccgcc gaacgtatgg tcttggaact gcgcggcaag
    18481 ctggtcgcgc atacggtaac ggacgggctg tttgccgccg cacccgccgc cgacgaaacg
    18541 gaagacatcg tcagcacgct gcttgcgctg ggttacagcg aacgcgaagc aaaagcggcg
    18601 gtcaaaggcg ttccggaggg gacggacgtg ggcgaaggcg tgcgccttgc tttgaaaaac
    18661 ctgctgaaat aatgccgtct gaaggcggcg cggcgtttgc cctgacgaaa ccctgcgttt
    18721 ccgcctcgcg ctgtcttccc gacggctttt cccgtaaaat ggcgttattg tccttccttt
    18781 cagacggcat tgtgtttgat gccgtctgaa actgttttac cgaaatcgaa aacaatgttg
    18841 aacaaaatat tttcctggtt cgagtcccga atcgaccctt atcccgaagc cgcgccgaaa
    18901 acgccagaaa aaggcttgtg gcggtttgtc tggagcagca tggccggcgt gcggaaatgg
    18961 atagccgccc tggctgcgct gaccgccggc atcggcatta tggaagccct gatttttcaa
    19021 tttatgggca aaatcgtgga gtggctcggc aaatacgcgc ccgccgaact gtttgccgaa
    19081 aaaggttggg aactggcggc aatggcggcg atgatggtat tttcggttgc gtgggcgttt
    19141 gccgcgtcca acgtgcgcct gcaaaccctt cagggcgtgt tccctatgcg cctgcgctgg
    19201 aacttccacc gcctgatgct gaaccaaagc ctcggttttt atcaggacga atttgccgga
    19261 cgcgtgtccg ccaaagtcat gcagaccgcg ctggcgttgc gcgacgcggt gatgacggtt
    19321 gccgatatgg tcgtttatgt gtcggtgtat ttcattacct ccggcgtgat tctcgcctcg
    19381 ctcgactcat ggctgctgct gccctttatc ggctggattg tcggtttcgc ttcggtgatg
    19441 cgcctgctga ttcccaaatt ggggcaaacc gccgcatggc aggcggatgc ccgctcgctg
    19501 atgaccggcc gcattaccga tgcctattcc aatatcgcca ccgtcaaact cttctcccac
    19561 ggcgcgcgtg aagccgccta tgccaagcag tcgatggaag aatttatggt tacggtgcgc
    19621 acccaaatgc ggctggcgac gctgctgcat tcgtgcagct tcatcgtcaa cacctccctg
    19681 accctctcca ccgccgcact gggcatctgg ctctggcaca acgggcaggt cggcgtgggc
    19741 gcggttgcta cagccaccgc catggcgttg cgcgtcaacg gtttgtcgca atacattatg
    19801 tgggaatccg cgcggctgtt tgaaaacatc ggcaccgtca acgacggtat ggcaaccctg
    19861 tccaaaccgc acaccatcct cgacaagccg aacgccctgc cgttgaaagt gtcgcaagga
    19921 gaaatcaagt tcgaacacgt cgatttctgc tacgaagccg gcaaaccgct gctcaacggc
    19981 ttcaacctca ccatccgccc gggcgaaaaa gtcggcttga tcggacgcag cggcgcgggc
    20041 aaatccacca tcgtcaacct gcttttgcgc ttctacgaac cgcaaagcgg cacggtttcg
    20101 atcgacgggc aggacataag cggcatcacc caagaatctt tacgcgccca aatcggtttg
    20161 gtcacgcaag atacctcgct gctgcaccgt tccgtgcgcg acaacattat ttacggccgc
    20221 cccgacgcga ccgatgccga aatggtttcc gccgccgaac gcgccgaagc cgccggcttc
    20281 atccccgaac tttccgatgc caaagggcgg cgcggctatg acgcgcacgt cggcgaacgc
    20341 ggcgtgaaac tctccggcgg gcaacgccag cgcatcgcca ttgcccgcgt gatgctcaaa
    20401 gacgcgccca tcctgctgct cgacgaagcc accagcgcgc tcgattccga agtcgaagcc
    20461 gccatccagg aaagcctcga caaaatgatg gacggcaaaa ccgtcatcgc catcgcccac
    20521 cgcctctcca ccatcgccgc aatggacagg ctcgtcgtcc tcgacaaagg ccgcatcatc
    20581 gaagaaggca cacacgccga actcctcgaa aaacgcgggc tttacgccaa actctgggcg
    20641 caccagagcg gcggcttcct caacgaacac gtcgagtggc agcacgactg aaccgatgcc
    20701 gtccgaacac ccgttttcag acggcatttc cacacccaac cccaaagaaa ccatgaacga
    20761 caccgcccaa attaccgcca gctacggccg ccgctacatt gtccgcacgc ccgacggcac
    20821 aacctacgaa gccagcaccc gcaaaaaacg cgtcgatttc gcctgcggcg accgcgtccg
    20881 catcagcccc gtcaacgccg aacaagttgt gattgaagat tttttaccgc gccaaagcct
    20941 gctctaccgc caagacgcgt ggaaaaccaa actcatcgcc gccaacgtta cccaactcct
    21001 catcgtaacc gccgccgtcc cgagtccgag catgcggctg ctacaacgcg ccctgcttgc
    21061 cgccgaagcc gccggcatcc gcgccgtcat cgtcctgaac aaagccgacc tgcccgaaac
    21121 cgccctttgg cgcgaaaaac tcaaattcta cgaaacgctg ggttatcccg tcatcgaaac
    21181 ccgcgcactg gaaaacgccg gcagcctgcg ccccgccctg caagggcaca gcaacatcct
    21241 gctcgggcag agcggtatgg gcaaatccac cctgaccaac gcccttttgg gcagccaaac
    21301 cgcccgcacc ggcgacattt ccgccgcact cgactcggga aaacacacca ccacccacgc
    21361 ccggctttat gatttgaacg gcgaaaccca actcatcgac tccccgggtt tgcaagaatt
    21421 tggtttacac cacctccaag ccgccgattt gccgcgctat ttccccgatt tccgccacct
    21481 tgtcgggcaa tgccgcttcc acaactgcac ccaccgcgcc gaacccggct gcgccttcaa
    21541 agccgccgcg caaaccggta aaatccgcac cgaacggctg accttcctgc aacgcattac
    21601 cgacgatctg ctcaaataac ctcttgccgt ttgcagggca aaaaccatgc catctgaaat
    21661 cctgctgttt cagacggcat ccggttttca gaaatgctac aattccgttt ttacagaaac
    21721 tcccgaaact atgaagaaaa acgccccgaa atcgtttgaa gaggcactgt cgcgccttga
    21781 atcgctgacg cagtctatgc agggtgaaat gcccttggag gatgcattgg cggcatatca
    21841 ggaaggcaac gagctggtca ggtactgcca aaccaagctg gcacaagtcg aacagaaatt
    21901 acaggttttg gatgcggacg ggctgaagga gttgaacctt gaatccgacg aatgatttga
    21961 aagcgtggca acagagggcg caggcacaga cagagctgct gctggaacgc tttttgccgt
    22021 ctgaaaacga aatcccgcac acgctgcacg aagcgatgcg ctatgcggct ttggacggcg
    22081 gcaagcgtct gcgtccgatg ctggtgctgg cggcttcgga attaggcgaa gccgtgcatg
    22141 aagcagtaga acaggcaatg gcggcaatcg aaatgatcca cgtctattct ttggttcacg
    22201 acgatatgcc ggcgatggac aacgacagcc tgcggcgcgg caaaccgact tgccatgtgc
    22261 aatacgacga agccaccgcg ctactggtcg gcgacgcttt gcaaacccaa gccttcgacg
    22321 tgttaagccg tccgacagaa ctgcccgcag cacgccagtt ggcaatgttg tcggtgttgg
    22381 cgaaagcggg cggcagcgcg ggcatggcgg gcggtcaggc aatcgatttg gcgaatgtcg
    22441 gcaaacaaat ggttcaagcc gatttggaac agatgcacag cctgaaaacg ggtgcgctaa
    22501 tccgtgcggc ggttttattg ggggcgatgt cctgcccgaa tctgtctgaa gacagtctgg
    22561 cggtattgga cgattatgcg gcaaaactgg ggctggcgtt ccaagtcatt gacgatgtgt
    22621 tggattgtga agcggacacg gcgactttgg gcaaaacggc gggcaaagac gcagacaacg
    22681 acaagccgac ttatgtaaaa ctgatgggct tggacggtgc gcgggcatac gcgtaccaac
    22741 tgaccgacga agcagtctcg ctgctcgaac ccttcggcga caaagccctg cgcctgcggc
    22801 agttggcaga atttgcagtc gcccgcaaat attaaaaccg gcgtatatcg ccggctgaaa
    22861 cgtgccggca cagcgatgcc ggcctgcact tgaatgaaac aaatgccgtc tgaaaaggtt
    22921 tcagacggca tttttatgct tgtctattcc ctgttgcgcg tgtgccaaaa ataccgccac
    22981 acgaaacagg gaaacgcaaa aatcaggtac aggcagacga cggtggcgta aaactcccaa
    23041 ccctgatcgt gtaccgctcc cgcacgggat tcgaggatgt aggcaagaac ggcggtcagc
    23101 gcgaaacctg ccgccagctc gatcaagtgg tgcccgaaat gtttgcgctt gagcggtacg
    23161 atgccgaaca gcctggtcgt gaggaagggg gcgttggcaa aaatcaaggc aagcagcaaa
    23221 aggatgtaca tggatgcggt catggcgggc tttctgtttg ggcattgtcg gcggcgatgc
    23281 cgtctgaact gcgttgcgga acggcatatc ttaacaaaaa cggcagcctc tgacacggct
    23341 gccgttgcgg cggcttacag cgtgttttcc aacgccttgg cgcaccagtc gataacggtt
    23401 tgcggcataa tgccccacag caccaacagc agcgcgttga cgctcaaaag gaattttgcg
    23461 gcattgttgc cgccgacggt gggacgggcg cggccggatt cgtcaaaata catgactttg
    23521 accacgcgca ggtagtagaa cgcgccaatc agcgacatca cgacggcaaa tacggacaac
    23581 caaacatagc cttgttttaa gagtgccata atcacgccga atttggcgta aaagcccatc
    23641 agcggcggaa tgcccgccat agagaacata accagcagca tcaaaaaggc aagccatacg
    23701 cggtgttggt tcaaccctgc caaatcgctg atgttttcgc actcgtcgtc cccgtccgac
    23761 aacaccatca acacgccgaa ccctgccgcc gccatcagcg cgtaggtaat ggcgtaatag
    23821 aggcccgccg caaagccgac cgcgcccgcc ataaacgcca acaggatgaa acccatatgc
    23881 gatacggtgg aataggcgag catacgtttg atattggtct gcatgatggc ggcaaggttg
    23941 ccgaccagca gcgaggcggc ggcaagcagg gcaaacatca gagaccagtc atgatgcacg
    24001 gttcccagcc cggtaacgag gatgcggaaa gcgaaaacga cggcggcgat tttcggggca
    24061 gtgccgacca aggcggtaac agaagtgggc gcgccgtgat acacgtcggg cacccacata
    24121 tggaacggca ccgcgccgag tttgaacgca acggcgacga caataaacac caaacccagt
    24181 ttcaacagcc attcattggc ttcttcattg aaggaagagg cgagcacgcc ggcaaattcc
    24241 agcgaaccgg ttgcgccgta aaccatagaa ataccgtaga gcagcaggcc ggatgccagc
    24301 gcgcccaaaa caaaatattt caaggcggct tcggcggcaa agccggaatc gcggcgcagg
    24361 gcaatcaggg cgtaaagggc aagcgacaag agttccaaac cgatataggc agttaaaaaa
    24421 tgccccgcgc tcaccatcac gctcatgccc aagagggcaa acagcgacag ggtgtaaaac
    24481 tcgcctttga aaataccgcg cacttggttg tagggcttgg cataaacaaa cagggcaaac
    24541 gtcaaggcat ataaaaccat ttttgccaaa cgcgacatac cgtctgcaat atacatgccg
    24601 ttgaacgaag acgtgctgcc ctgttcccaa acggcaagct gcaccacagc cgtaaccgcc
    24661 accgttgcca acgcgccgta atgcgtccaa cggcgtttgt catcactgac ccacaagtct
    24721 gccagcaaca ataacaccag cagcgacagc agcgcgactt cgggcatggc gggcattaaa
    24781 ttcaaatcag accagttcat ttacacacct caaatcttgc tttgtgccac atgggcaatc
    24841 aaatcgtttg ccgcctgatg caccacttcg ataaacgctt gcggatacag acccataccc
    24901 aataccacaa ccgccaaaat cgccagaatc gcaaattcgc ggcagttgat gtctttcatt
    24961 tcggcaacgt gcggattgtg gatcgcgccg taaatcacgc gcttgtacat ccacagggta
    25021 taagacgcac cgtaaatcaa ggtcatagcc gccagcgcgc cgacccagaa attcactttg
    25081 accgcaccca taatcaccat aaactcgccc acaaagccgg aagtcgcagg cagaccggcg
    25141 ttcgccatac cgaacaacat cataaacgcc gcaaacttag gcatcacatt gaccacgccg
    25201 ccataatcgg caatattgcg ggtatgcagg cggtcgtaca tcacaccgat gcacataaac
    25261 atcgccgccg acacgaaacc gtgggaaatc atctgaatga ccgcgccttt caatgcccag
    25321 tcgtccaact gcccgtcaac aaacaaaaac atcccaagcg ttacaaaacc catatggctg
    25381 atggacgaat acgccaccag ttttttcata tcggtttgca ccaaagccac cataccgata
    25441 taaatcacgg caatcagact caatacgatg atcacggggg caaaatagcg tgccgcatcc
    25501 ggcataatcg gcaggataaa gcgcaagaaa ccatacgcac ccagtttcag cgtaatcgcc
    25561 gccaacacca tcgaaccgcc ggtcggcgct tcaacgtggg catccggcag ccaagtgtgt
    25621 acggggaaca tcggcacttt tacggcaaac gacaggaaga acgccgcaaa caaaagctgc
    25681 tgtacgccca acggaatctg tttaatgttt tggaaatcga caatagagaa gctgcctgtt
    25741 tgatagtaca ggtaaaccat agcaaccagc atcaggagcg aacccatcag cgtatagagg
    25801 aacagcttga ccgacgcata gacacggcgc gggccacccc ataccccgat aatcaggtac
    25861 aacggaatca gcataccctc gaagaacaca taaaacagaa tcgcatcctg cgcggcaaac
    25921 gcaccgttaa tcaaacccga catcatcagg aatgccgcca tatactgcgc cgggcgtttc
    25981 tgaataactt cccaaccggc caataccacc aacagcgtaa taaacgcatt caagatgata
    26041 aagagcaccg aaataccgtc cacgcccaat gcatagttga ttttcagcag cggaatccac
    26101 tcgtggaact cggtaaattg atagccgccg ctcaaacggt cgaaaccggt aaacaggggc
    26161 agcgttacca agaaaccggc aagcgcaccc ataaaggcaa gcacacgcgc cagcggcgca
    26221 cggctgtctt taccggtcgc caaaaccagc acacctgcgg cgatgggtat ccatattgcc
    26281 aagctgagta ggtagttgga aaacatagtg gttaacctgt ggttaaaata aaaatatcgt
    26341 agtgcgggtt agtttgtcag acgacgtttc aggaggtcgt ctgaaaaagg gatgaatact
    26401 ctctcccctc tttactcact cccaatcaat atctgtacta tcgcgatatt ctgcctgcac
    26461 taaaacatct aattcagcca aattttttat ttctgactgc attgctagta aagctcttaa
    26521 cttcatactt aaatcaatat atctagagcc ttcacttgct ccttttgcag acttaaattt
    26581 atttttttct aaaaattttt taataggagc gtttaacact ggatatctat ctggatattc
    26641 ttgacaaagc atttcagaaa aaactgaacc acgagtggaa actccacatt cttttagcca
    26701 atcaatttgc ttggcaacaa cattatctct ctcagcaagt ggtgcatcaa aaactgattg
    26761 gatagcaatg cataattttc taaaatctga agactttccg gtccttttcc acgtttgatc
    26821 ttgaaatcga ttacctaccc cttctccttt attttcgctt ttccaagacc ataatttatt
    26881 aaattccaca taaaactcat cattgtctat ctttcctgca gcacattgct taataagact
    26941 ttttaattga ttacacacag tttgatggtt tctcatctgt tttctccgtg ctgcaatcag
    27001 ttcttgatta taatttggca tttccataaa taacttatcc atcaatgatt ggctaacagt
    27061 tgatttctta taattaattt cagcttcctg atactcctca agccaatctt ccgatactgg
    27121 gatagatttc atcgcaattt catcagccca agatttgact tttataaaat cctgctcgga
    27181 aattttagtc aaaatatttg cttcataatt gctattaaac gcagcatgag tcaaatttga
    27241 agaaccgatt aaagcataat attcattctt atcattcttc caaaatacag ctttaggatg
    27301 aaaaccctga atgccttgag ctaccatcag tgtgaatttc aaatgggacg gaagccattt
    27361 caacactttc cgaatagcct cttttttaga caatccgaaa tcttgtccaa aaataaattt
    27421 aaactcttgc aatttgctat tgagcttatt ttttacatcc caatgagtga gatacgcaga
    27481 gaaaatatac agctctactg cctctgaaac agctttctca tatattgaaa tcagttcctt
    27541 ctcatttggt gtatctgaat gtaaaaataa ctgtgtcatc ccttttgact cctctatatt
    27601 tgttgagatt gcctaaaaaa tttaggaaac agataatttg catgttggct atttcacgcc
    27661 tgttgggtac cattttgttc caccctttga cttaatgccc acttctcaaa cttttcagac
    27721 gacctctaca aaactatgaa caggtcgtct gaaactccgc ctttatctga acaatcccca
    27781 gaaggtcatg ccgagcagta ccaatacgcc gaataccata gcggcggcgt aggtgtagat
    27841 aaagccggtt tgggctttac gcacttgcgc ggcaatcgcg ccgaccagtt tggcagagcc
    27901 gttgacgatg ccgttatcga taatggcggt atcgccgact ttccagaaga aggtacccag
    27961 tgcgcgcgtg cctttagcga agacgttgaa atacagggcg tcgaggtagt atttgttttc
    28021 aaacaaaacg taaaccggac ggaacgcctg cgcgattttg gcgggcaggt gcggcagttt
    28081 gacgtacaaa agccacgcgg cggcaacacc ggcagccgcc aaatacaaaa caggcgatgt
    28141 caagctgtgc gacaccattg ccaatgcgcc gtggaactct tccttcatga tgtgcatggt
    28201 cggatgcgcg tcggcgttga cgaaaatcac atctttgaag aaatcgccgt aaagcatagg
    28261 ctcgatggca acgtagccga tgatgacgga cggaatggca agcaaaatca aaggcagggt
    28321 aacaaccagc gggctttcgt gcggattgtc gtttttgccc aagccatgat gctcttcacc
    28381 atgatgatta tcatgatgct caggcaggct gcgccatttc tcttcgccgt ggaacaccat
    28441 aaagtattgg cggaacgcgt aaaacgcggt aacgaacacg ctggcgagga cggcaaaata
    28501 ggcaaagccg ctgcccggca gggtgctgta tttggctgct tcgataatcg aatctttgga
    28561 gtagaagcca gagaagaacg gcgtaccaat cagcgacaaa ttgccgatca gcatggtcag
    28621 ccaagtaatc ggcatatatt ttttcaggtt gcccatatgg cgcatgtctt ggtcatggtg
    28681 cataccgata atcgcgctgc ctgccgccaa gaacaacaag gctttgaaga aagcgtgggt
    28741 catcacatgg aacatcgcca cggaataggc ggacgcgccc aaagccacgg tcatatagcc
    28801 caattgcgac agggtggaat acgcaaccac acgtttgatg tcgttttgaa tcacgcccaa
    28861 gaaacccata aacagggcgg taatcgcacc aatcaccatg atgacagaca gcgcagtgct
    28921 actcatctca taaatcggcg acatacgcga taccatgaac agaccggcgg taaccatggt
    28981 tgcggcgtga atcaatgcag aaatcggggt cgggccttcc atcgaatcag gcagccaaac
    29041 gtgcagtggg aattgtgccg atttacccat cgcgcccaca aacaggatca ggcaggttac
    29101 ggtaatcaaa gaccattcca caccggggaa aagctggatg gtggcatttt ggacgttggg
    29161 cagataagcg aatacatctt gatagcgcag gctgccgccg aaataggcaa gcaccaagcc
    29221 gataccgagc aaaaagccga agtcaccgac acggttgatc aaaaaggctt tcaggttggc
    29281 aaatgttgcg ctcgggcgtt tgaaatagaa accgatcaag agatacgata ccaagcccac
    29341 agcctcccag ccgaagaaga gctggatgaa gttgttgctc ataatcagca tcaacatact
    29401 gaaagtaaac aaagaaatat agctgaagaa gcgttggtag ccgacttttt catcgtgcat
    29461 atagccgatg gtgtagatat gcaccatcaa cgacacgccc gttaccacga ccatcatcat
    29521 cgccgtcatc gtatcgacca agaagccgac ggaaaaatcc aagccgccca ttgtcagcca
    29581 ggtatagacg ttttcgtcaa acttggcgcg gctgccgtcg ataaagcccc acagcacata
    29641 agccgacaac acggcagaca ccgccacacc gagtatcgta acagtatgcg caccggcacg
    29701 accaattttg ttgccgaaca aacccgcgag caaacagccc accaatggca tgagcgcgat
    29761 gattaaatat aaagtcatgt cggtcataat tgaacctttt tacttttaaa tttaaaactt
    29821 ttttagctgt atttttgttt agactgcctg aaaaacggca taaataccaa tgccaataaa
    29881 caatatcgca caaaatatat tgattatttt ctcacgcttt ggggtcatga ttttggaaat
    29941 ccccaaaccg taagccaata aaataccgta atccaataca caccaaataa tcgttaaaac
    30001 caataaactc ggtaataacg ccatatccat tttttgaaca aatggtggaa aaaatgtcat
    30061 gaaaaaaatc acatctttgg gattagaaat acctaccata aaagaattaa ccattaattt
    30121 agataattca ctaattgttt gttcttgctt attttcatga ttaatttttc tactatccgc
    30181 ccaaattttc caaccataat aaatcaaata caaaccgcct aataccgata accatgttag
    30241 aaatttatta ttaacatttc ctaaaccagc tatcatcaat cctgcgctaa taattaaaac
    30301 caatgaagca gcatttgtac ctactaccgc aaaaaatgca ccttttaaac catatttcgc
    30361 agccgcatta accacaacca aattgacagg accaggcatt aacaaaaaaa caaatacagt
    30421 taaaatataa gtcaataata ttgaaattaa cattttgatt tctccatatt ggaaaatgga
    30481 caaatcaaag gaagtttcac gttaccctct tcatgttgat actgtttcca atcaggttta
    30541 gtgtcatcat taatacttaa agtatctgca ataatcccat tattatattg tttcactcta
    30601 tctctaatta aattagaaat tttcctttct ccattcacta ctggggcaac gataagaaaa
    30661 ttttctgatg gattaactac catagttaaa taactattta catttctact tttatgtaaa
    30721 atatgttgtg gatgattgat attaaaaaac aaatttactc cattgaatct aaacttccaa
    30781 cctgcttgat ttggatttaa tacatcttca tcattaaagt tatcttgatt aaactgaaaa
    30841 atttgtttta atatttccca tgccttattt tgacttgctt ccaatgtatc taattgaaaa
    30901 ttaaaaataa gaattaatgg aaagtataat ctatcttttg caataatctc tttacaaaat
    30961 ctagtatact ccaataaagt atttaataaa ctttccaaat cataatttga tgtatattca
    31021 gtacaaatat cagtttctat aaaagcaaat agtaaatttt ctaaattatt agctcttctt
    31081 gcaaaaacac aaggaaaaag ctcttggttt aatgtagtaa ctaattcaga agttgcaata
    31141 tttatccaat caggatattc caataaatta atattagatt gtttaactaa aaattgaaaa
    31201 tcaaattgat tattttcaaa attattcgcc ataaacttcc cctaaatcga tagttaattc
    31261 atctactatg taaactgatt tcgtggtcga agcccaagct acgcgaatgg ttgagggcga
    31321 cagcgtgggt gcggcgacaa gacgccgcgt tcaaacttaa ccttttaaag aatttaattc
    31381 cgttacatca atcgtttgtc ggttgcggta caccaatacc ataatcgcca aaccgatggc
    31441 agattcggca gcggcaacgg tcaatacgaa gaatacgaaa atttgtccgg cagtatcgcc
    31501 caaatgttgc gagaaggcga taaagttgaa gtttaccgcc aaaagcatca gctcgatgga
    31561 catcagcaat accagcacgt ttttgcggtt cataaagata cccattgcgc tgataccgaa
    31621 caggagcgcg cccaatacca gataatgcgt caaggtaatc atgctttgcc ctccccttcc
    31681 ggcttgaggc cgtctgaaac ttcgctttct tcggcagatt cgacttgcgg tttgaccgct
    31741 tccattttca ccagacgcat acggccttga tcggcgcgta ctttaacttg gtcggcagga
    31801 tccatacgtt tcggattaac cgttttacgg tgaaccagcg caatcgcagc caccataccc
    31861 aacagcagca ataccgccgc caattcaaac ggcaacaggt aatcggtata aatacggctg
    31921 cccaaatcgc ggatattgtt gtaatcggcc ggaatgtctt tcatcaaacc gaatgaggca
    31981 aggtcggttt ttgggttgac cagaatcaga atcagggcaa ccgccaacaa tgtgccgacc
    32041 acaccggcaa caggcgcatg acgccagaaa ccggcgcgca tttcctcgat gtcgatgttc
    32101 aacatcatca cgacgaacag gaacaacacc atcacagcgc cgacgtaaac caccaccagc
    32161 gtcacgccca aaaactcggc ctgcatcagc atccaaagca tcgcgctcac gcagaaggtc
    32221 agcaccagat gcaaagcggc gtggacaggg tttttagcgg taacggtacg cagcgcgccg
    32281 tataagacga tggtggcaag gatatagaac agaatcgcgg aaaaagtcat tcgtctgctc
    32341 cttaacgata cggcgcgtca gcggctttgc gtttggcgat ttcagcttcg tatttgtcgc
    32401 caatggccaa aagaatcggc ttggtcatgt gcaagtcgcc ttttttctcg ccgtggtatt
    32461 caaaaatatg cgtttccaca atcgcatcgg tcgggcaggc ctcttcgcag aaaccgcaga
    32521 agatgcactt ggtcaggtcg atatcgtaac gcttggtgcg gcgggtgccg tcttcgcgtt
    32581 cttccgattc aatgttaatc gccattgccg gacaaactgc ctcgcacaat ttacacgcga
    32641 tacagcgctc ttcgccgttc ggataccgcc gctgcgcgtg caggccacgg aaacgcacgg
    32701 attgcggcgt tttctcttcg gggaaataaa tcgtgtcttt gcgggcaaaa aagtttttga
    32761 gcgttacgcc catgcctttg acgagttcgc cgagcaagaa agtttttact aaattagcca
    32821 tattctgttc cctcacaaca gggatttcgt taggtattca aaatcgcttt gttcagacgg
    32881 cctcaagatg ccgtctgaaa cttatttcca caaattcagc ggtgaaatca tccacacgcc
    32941 caaaatcacg atgtaggcga agccgatcgg aatcagcact ttccagccca aacgcatgat
    33001 ttggtcgtaa cggtagcgtg ggaaggttgc acggatccac aggtaccagt acagcaccgc
    33061 cgccattttc acgaacatcc agaatgcgga aggcgtaccg ataaagcccc agctttgcgg
    33121 gaacggagac agccagccgc cgagaaacat cagcgatgtc agcgcggcaa tcagaatcat
    33181 gaaaatgtat tcggcaagga agaacagcgc gaatgcgaag ccggaatatt caacgtggtg
    33241 tccggcaacg atttcggact cgccctctgc cacgtcaaac ggtgcgcggt tggtttcggc
    33301 aacggcggaa atcagataga cgatgaagat ggggaacagc ggcagccagt tccacgagaa
    33361 tacggaaccg cccgcgatac cttttgcctg cgcggcaacg atgtcggaga agttcatgct
    33421 gcccgacacc atcacgacac acaccagcgc ggcactcatg gcaatctcgt aggaaatgct
    33481 ttgtgcggaa gcacgcattg cacccaagaa cgaatatttg gagttggaag cccagcccgc
    33541 gatgatcacg ccgtaaaccg acagcgaggt aatcatcagg atatacaaaa ggccgatatt
    33601 gatgttggtc agcacccatt cttcgttgaa cggaatcact gcccacgccg cgaaagacgg
    33661 ggcaagcgac ataatcgggc cgatatagaa cagggctttg tttgacagct tcggacgggt
    33721 tacctcttta aacaagagtt tgaacacgtc ggcaaacggc tgaatcagac cccacgggcc
    33781 ggttacgttc gggccgacac gaagctgcat aaagccgatg actttacgtt cgaaatacgt
    33841 caggtaggca acggtcagaa tcagcggaat caggataatc acaattttga cgatgacgga
    33901 taccaccaag cctacggtaa tacccaaatc gcccagaccg agcgttgcgg caaagaggtt
    33961 ttggaaccat tcttgcatga tcaagctccc gccagttcaa tagtgtccat caacgcaccc
    34021 agcgcggcat tttcggtatg cagcggcaga tgcaccacgt tttcaggcaa accggcatcg
    34081 gctttgacgg caaccgatac gcttgcgccg ttttgtttgg cgacagcaat ttgtccgtct
    34141 tgcaggccca agcgtgccaa agtgttcgga tttacacgcg cggcaggcac ggcggcatgg
    34201 ctggtttctt gcaacggtgc ggaacggcgc acgatagaat cagtgtgata aataccgacg
    34261 ccgccgacac ggacaaggcg gtctgaggcc gtctgaacgc cctcccctgt ccatgtgcta
    34321 cggttgtcca gtttggacgg caggctttct gcatccagcg cgtctttcag aatcgcagcg
    34381 gtatcgtgat attcaaaacc tttcaggtca aacagattgc ccaatacgcg caatactttc
    34441 cacatcggac gcgaatcgcc gaagccttgt accacgccgt ggaaagattg ctgacggcct
    34501 tccatattga tgaagctgcc tgaggtttcg gtaaacggtg caatcggcaa caacacgtcg
    34561 cacacgtcca gcagcgtttc gctgacaaac ggcgtaaacg ccatcacgct ttttgcctgt
    34621 ttcaacgcgg ctacggcttt tgcaccgtca accgtatcaa tttccggctc gacgttgagc
    34681 aacaagactg cctgtttcgg cgcgtttgcc atttcggcaa cgctctcgcc ggagtttaca
    34741 ttcaagacat ccgcaccaac actgttggcg gcttgcggca aaatacccag cactgcgccg
    34801 gtcgcgtccg ccagctcttg cgcggcggca taaatggcgg cgtaatcagg atggttttgc
    34861 acttccgcgc ccaaaatcac cgctgctttt tcagcgtttt tcaggctggc ggtaacggcg
    34921 tgttccgcat cggcagacag gtttttcaga cgacctgccc actcgtcggg atgtacggct
    34981 tcttgagaca gaagcggcat aaacaattct tctttactgc ttgccaatac gctcaaagcc
    35041 atgcggtctt tagcggcgcg gcgcaggcgg gcggtcagaa gcggctgttc tttgcgcagg
    35101 ttcgcaccga ctaccaatac ggcatcgttg tccgccagcg attcaatgct ttgtcccaac
    35161 cattgcgcac ctttaatgcc gtctgaaaga cgtttgtctt gttggcgcag acgggtggca
    35221 aagtttttaa cacccaagcc gtcggcaagc tttttggcca aatacagctc ttcaaccgta
    35281 ttcatcggat tggcccaaac gccgacttga ttttggttgc cgtctttggc gatacattta
    35341 attgcgctgt ggacatattc caacgcggtt ttccaatcca cgtccatcca ctcgccgccc
    35401 tgtttgattt tcgggttttt caaacggctt tcgtgataca ggccttcata ggcaaaacgg
    35461 tcgcggtcag acagccaaca ttcgttaatc gcttcgtttt ccagcggcaa cacgcggcgg
    35521 acggtatggt ctttggtttg tataatcagg ttgctgccca aagcgtcatg ggcggaaacg
    35581 gatttgcggc ggttcaattc ccaagtacgc gcgttgaagc ggaacggttt gctggtcaat
    35641 gcgccgacag gacacaaatc gatgacgttg cccgacagct cggtttccac cgttttgccg
    35701 ataaagggca tgatttcgga gtgttcgccg cgattcacca tcgcaatttc ctgcaaaccg
    35761 gcgatttctt cagtgaaacg aacgcagcgg gtgcagtgga tacagcggct catttcctcg
    35821 gcggaaacca aaggccccat gtctttgccg acgacggaac gtttttcttc ggtgtagcgg
    35881 ctggtggttt ttccgtagcc caccgccaaa tcctgcaact ggcattcgcc gccctggtcg
    35941 caggtcggac aatcaagcgg atggttgatg agcaggaact ccatcacgcc ttcctgcgcc
    36001 tctcgggctt ttgccgaatg cgtacgcaca atcatgccgt ctgtaaccgg cgtggcacag
    36061 gcaggcaggg gttttggggc tttttctacg ttcaccagac acatacggca gttggcggcg
    36121 atggaaagtt ttttgtggta acagaaatgc gggatataag taccgagctt gtgcgcggct
    36181 tcaatcaccg tcgcgccctg ctccacagat acttgtttgc cgtcgatttc gatttgtaac
    36241 atggttcgtt cctagttacg ggtatttgat aaataatctt ttatggaggt cgtctgaaaa
    36301 atgggtttca gacggccttt tgagtttcat tgacaatcaa tactgtttaa aacgtttact
    36361 gccaccttgc cgtcattccc gcacaggcgg gaatccattt tttgaatttc ggcaactgct
    36421 tttcaaatat cgggttctgt aaattccact atggattccc gcctacgcgg gaatgacggc
    36481 aaagttaaat ttttagcatt ttgcttttaa ccaatataaa accaactaaa actataactc
    36541 atttattata tttttaaatg acttaaataa ctctttaaca gcacgctcat tgtcttcatc
    36601 tgtaggctca aacttttcac accaattaat tatatttaca tcgccatgca ataactctgc
    36661 ataacatcct actgcatcgc aactaccacc ccgtgtcctt gacgtgccaa aaataaaatc
    36721 acaattatgc gaataaagtt tgtataaatt tctcctaacc tcgtattcat tatcaccaga
    36781 tgaataaaaa ccaattctct gaccttcatg atcaaatact gcaacaaaat ctaagccatt
    36841 tccatgtctt tcaaaaaaga ctagaaattt agaaaatttc caacaaatct gattaaaaag
    36901 cgtattgagt gtcgtactct tacctttgtt ggctgcaccg tatagaataa aaattttagc
    36961 ttccaccatt accaccctcc ccacttatgc tctttcatcg gtccgccgtg ttcgatgtaa
    37021 tgcacaaact catcacggaa atgcttggta aagcttcgga cggggaagac ggcggcatcg
    37081 gcaagggcgc agatggtgcg gcctgccatt tggttgccga cagaatccag caaatccaaa
    37141 tcttccatgc ggcctttgcc ttctacgatg cggtggacga tgcggtaaag ccagccggtg
    37201 ccttctcggc aaggcgtaca ttggccgcaa gactcgtcgt agtagaagta gctcaggcgc
    37261 tcaagggctt tcaccatgca cacgtcttcg tccatgacga taatcgcgcc agaacccagc
    37321 atcgagcctg ctttggaaat cgagtcgtag tccatatttg tctgcatcat gatgtcggca
    37381 ggcaatacgg gcgcggacga accgccagga ataacggcct tgagtttttt gccgccgcgc
    37441 ataccgcctg ccattttcaa gacttcggca aacggtgtgc ccaatggcac ttcatagttg
    37501 cccggacgct cgacgtggcc ggagatgcag aacagtttgg taccgcctgc attcggaata
    37561 cctttatcgg caaatgcctg tccaccgtca cggataatga atggaacgga ggagaacgtt
    37621 tcagtattgt tgatggtagt cggtttgccg tacaggccga acgaagcagg gaatggcggt
    37681 ttaaagcgcg gctggccttt tttgccttcc aacgattcga gcaatgcagt ttcttcgccg
    37741 caaatatatg cgccgtagcc gtggtgggcg aagagttcaa attcaaaatc cgaacccaaa
    37801 atatttttac ccaaaaagcc tgcggcgcgc gcctgctcca aagcggattc aaagcgttga
    37861 taaccttcga aaatttcgcc gtgaatgtaa ttgtagcccg ctttcgcacc catcgcgtaa
    37921 ccggcgataa tcatgccttc aatcagggca tggggattga acataataat gtcgcggtct
    37981 ttaaatgtac cgggctcgcc ttcgtcggta ttgcaaacca catatttttc gcccgggaaa
    38041 gaacggggca taaagctcca tttcaaaccg gtcgggaagc ccgcaccgcc gcgcccgcgc
    38101 aagccggagg ttttgacttc gtcaatcaca tcggtttgcg agatgttttc ggacagaatt
    38161 ttacgcaggg cggtatagcc gccgcgtttg acatattcgt ccaatgtcca acaatcggga
    38221 ttggcggtat ccacttggtc aaaaatcacg cctgattggt aaatagccat ttttggtgtg
    38281 cctgtttgtt ttcgtatcgg ttgcggccgc tgtttcagac gaccttaaga tgtctttgtg
    38341 taccggcttg taacgtcgtc tgaaataaaa tctagtttat caaatcgata ttttcagacg
    38401 acctttaatc gtttttgttg gatctcgacc acttgcttgt ctgtcgtcat tcccgcgcag
    38461 gcgggaatcc atcctcaatg gtaagcaatg tcttattaaa ttcagaaacc gaatcttacc
    38521 ggtggattcc cgcctgcgcg ggaatgacgg catttcggta tttcagtagg gcggattctt
    38581 aaatccgaca ttttgccttt ttacccactc tgtcggatac aagtatccga cctacgttta
    38641 aatcgtcgtt tcagacgacc tactccaact ccgccagttt cttctcaatc gcctcttcag
    38701 tcataaagcc gcacatgctg tggttgttga ccagcatcac cggagcgtcg ccgcatgcgc
    38761 ccatgcattc gccttcgaca agggtaaatt tgccgtcggg cgtggtttcg ccgtagccga
    38821 taccgagttt tttcttcagg tattcgccgg tatccatgcc gccgcgcagg gcgcagggca
    38881 ggttggtaca aacggtcagt ttgtatttgc cgacaggctc aaggtcgtac atattgtaga
    38941 aagtagcgac ttcgtaggct tgtgcaggcg tgatgccgat atagtcggca acaaaggcga
    39001 tggtctcggg agcaagccag cctttttcgg tttgggcgat acgcaacgca cccatgatgg
    39061 cggaacggcg ttggtcggcg ggatatttcg ccagttctgt gtcgatttgt tttaaggact
    39121 ctgcggataa cattatcggt caacctcccc gaatacgatg tcctgcgtac cgatgatggc
    39181 aacgacgtcg gcgagcatgt ggccttttgc catttcgtcc ataccttgca ggtgggcgaa
    39241 gccgggtgcg cggattttca ggcggtaggg tttgttcgcg ccgtctgaaa tgatgtaaac
    39301 gccgaactcg cctttcgggt gttcgacagc ggtgtaggtc tcgccctcgg gaacgtgcat
    39361 accctcggta aagagtttga aatggtgaat caggtcttcc atacctgttt tcatttcggt
    39421 acgtttgggc ggagcgaatt tgtggtttgt ggtaatgacc ggacccggat tgacacgcaa
    39481 ccactcggaa cattgtttga tgatgcgtac ggattgacgc atttcttcca tacggcagag
    39541 gtagcggtcg tagcagtcgc cgttcacgcc gacagggatg tcgaaatcca ttttgtcgta
    39601 catttcgtaa ggctgtttct tacgcacgtc ccattccaca cccgaaccgc gcaacatcac
    39661 gccggtaaag cctttttgca tggcgcgctc aggagtgaca acgccgatgc cgacggtacg
    39721 ctgtttccaa atacggttgt cggtcaggag ggtttcaagt gtatcgatgt ttttcgggaa
    39781 acgttcgcag aaggcatcga taaagtcgag catggtgcct tcgcgggatt cattgagctg
    39841 cttcaatact ttggcattgc ggaatttgct gctctcgtat ttaggcatga agtcgggcag
    39901 gtcgcggtaa acgccgccgg gacggaagta ggctgcgtgc atacgcgcgc cggacacggc
    39961 ttcgtacaag tccatcagct cttcgcggtc gcggaaggcg taaaggatgg cggtcatcgc
    40021 gccaatgtcg aaggcgtgtg aaccgatgcc catcaagtga ttgaggatgc gcgttacttc
    40081 ggcgaacatc acgcgaatat actgggcgcg gataggtaca tcaattccgg caagtttttc
    40141 tactgccaaa caatacgcct gctcgttgac catcatggaa acgtaatcca agcggtccat
    40201 atagggcagg gcttgcagat aggttttggt ttctgccagt ttttcggtac ctcggtgcag
    40261 gaggccgata tgtgggtcgg cacggacgat ggtttcgccc tccaactcca aaatcatacg
    40321 caatacgccg tgcgccgcag ggtgttgcgg gccgaagttg atggtgtagt ttcttaattt
    40381 attggccacc gtagttctcc tcacggacga tacgcggcgt gatctcgcgc ggctcaatgg
    40441 taacaggttg gtaaatcacg cgtttttgct cttcgtcgta acgcatttcc acatagccgg
    40501 aaatcgggaa gtctttgcgg aacggatgtc cgacaaagcc gtaatcggtc aggatgcggc
    40561 gcaagtcggg atggttgttg aacatgatgc cgtacaaatc gaaggcttcg cgctcgtacc
    40621 aatccgcgct gttgtaaacg ggaactacgg attcgactac ggggaagtcg tcgtctgaaa
    40681 cccagacgcg tacgcggatg cgttgattgt ttttaacgga aagcaactga ctgacgacgg
    40741 caaagcgttt gccctgccat acttcgtttt tgtaagtgct gtaatcgaca ccgcacaagt
    40801 cgaccagaag ctcgaaatgc aactcttcat ggtcgcgcaa tgcggtcatg actgaaatat
    40861 agtgttcggg cagacactcg acggtaatct cgcccaaagc ggaaatgact ttgcctgcct
    40921 gattgcccaa aacgcggctg acggtttcgt ataagttttg aatgcttgcc atatcgtcct
    40981 ctccttactc gtcacgcgcg atggtggaag tgcgcttgat tttttgttgg agctgaatca
    41041 ggccgtaaat cagggcttcc gcagtcggcg gacaacccgg cacataaacg tctaccggca
    41101 cgacgcggtc ggcaccgcgc acaacggaat aagaatagtg ataatagccg ccgccgttgg
    41161 cacacgatcc catagacaat acccagcgcg gctcggcgag ctggtcatat acgcggcgca
    41221 gggcgggcgc cattttgttg gtcagcgtac ccgccacaat catcaggtcg gcctgacggg
    41281 gggacggacg gaaaataatg ccgaaacggt caaggtcgta acgcgccata cccgcgtgca
    41341 tcatttccac ggcgcagcag gccaagccga aagtaaccgg ccacaacgaa ccggtacgca
    41401 tatagttcaa caccgtatcc gcgctggtgg tgatgaaacc ttttttcaaa acgccttcta
    41461 ttcccattcc agcgcacctt ttttccattc gtaaacaaag cctaccgtca gaacgacgat
    41521 aaacaccagc atagaccaga agccgtatgc gcccaaatct ttgaacacca ccgcccacgg
    41581 cagcataaac gcaacctcca aatcaaacag gatgaagagg atggcgacga ggtaatagcg
    41641 cacatcaaac ttcatccttg cgttttcaaa ggcttcaaaa ccgcattcgt aaggcgcgtc
    41701 tttttcggcg tagtggcgtt tcgggcctaa aatcgtgccg agcaggataa acagcacgcc
    41761 ggccgcgagg ccgacgagga taaagacaaa gacgggaaag taagcggaca acatggttac
    41821 acccaaatcc gttaacaaaa tttctacaat aatttcgtat tttagcgaat ttcaaaaacc
    41881 attaaaaggt aaatatcggc aaaacgccca aaaaaaccca ataaatacaa tcatgttatg
    41941 ataacgattc ttatttgatt ttataaggtc atataaattt ttacaccgta attcgtggta
    42001 tagtggatta acaaaaacca
//
LOCUS       DAWGBY010000005        40663 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.005, whole genome shotgun sequence.
ACCESSION   DAWGBY010000005 DAWGBY010000000
VERSION     DAWGBY010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 40663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40663
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.005"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..256)
                     /locus_tag="WHG62_000239"
     CDS             complement(<1..256)
                     /locus_tag="WHG62_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ1724412.1"
                     /translation="MVWKTLGEVFDLKNGYTPSKSNKEYWENGSIPWFRMEDIRENGR
                     ILDNSLKHISKSAVKGGKLFPAKSIMMSTTATIGEHALIKV"
     gene            complement(406..879)
                     /locus_tag="WHG62_000240"
                     /pseudo
     CDS             complement(406..879)
                     /locus_tag="WHG62_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259875.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(1045..2055)
                     /locus_tag="WHG62_000241"
     CDS             complement(1045..2055)
                     /locus_tag="WHG62_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEZ1724413.1"
                     /translation="MSIILYTANDGTAQFALQEFGGQLWLTQADMAELYQTTKQNISK
                     HIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQF
                     RQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYA
                     TSQDYNPKSSESQTFFAAVQNKLHYAASRQTAAELIYSRADSSKDFMGLTTFQGAIPT
                     LNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFSGLYGQ
                     GTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDR
                     TK"
     gene            complement(2052..3596)
                     /locus_tag="WHG62_000242"
     CDS             complement(2052..3596)
                     /locus_tag="WHG62_000242"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEZ1724414.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAVVSNPPYSINWIGSGDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSNYVEPEDTREIIDIKQLNAEISETVAKIERLRREIDEV
                     IAEIEA"
     gene            complement(3669..4673)
                     /gene="rfaD"
                     /locus_tag="WHG62_000243"
     CDS             complement(3669..4673)
                     /gene="rfaD"
                     /locus_tag="WHG62_000243"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ1724415.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            complement(4802..5833)
                     /locus_tag="WHG62_000244"
     CDS             complement(4802..5833)
                     /locus_tag="WHG62_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ1724416.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPFIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEILLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKN"
     gene            complement(5835..7070)
                     /gene="dcm"
                     /locus_tag="WHG62_000245"
     CDS             complement(5835..7070)
                     /gene="dcm"
                     /locus_tag="WHG62_000245"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ1724417.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(7107..8078)
                     /gene="hldA"
                     /locus_tag="WHG62_000246"
     CDS             complement(7107..8078)
                     /gene="hldA"
                     /locus_tag="WHG62_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ1724418.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(8133..8873)
                     /gene="pyrF"
                     /locus_tag="WHG62_000247"
     CDS             complement(8133..8873)
                     /gene="pyrF"
                     /locus_tag="WHG62_000247"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ1724419.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAASTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(9399..10046)
                     /gene="adk"
                     /locus_tag="WHG62_000248"
     CDS             complement(9399..10046)
                     /gene="adk"
                     /locus_tag="WHG62_000248"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ1724420.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            10261..11100
                     /gene="htpX"
                     /locus_tag="WHG62_000249"
     CDS             10261..11100
                     /gene="htpX"
                     /locus_tag="WHG62_000249"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ1724421.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGAGSLLAYSAVVG
                     FSGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(11401..11961)
                     /locus_tag="WHG62_000250"
     CDS             complement(11401..11961)
                     /locus_tag="WHG62_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724422.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(12075..12467)
                     /locus_tag="WHG62_000251"
     CDS             complement(12075..12467)
                     /locus_tag="WHG62_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ1724423.1"
                     /translation="MGKRMTFDTAKSRFQEKFPHLELLEFSGIYKPSSVRCPTHGVVQ
                     LLYYDTAIKSKYGCPECGKLKMKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALN
                     TPYGSIRTKLDGRSNPDNLVCNRYKVLL"
     gene            complement(12675..13067)
                     /locus_tag="WHG62_000252"
     CDS             complement(12675..13067)
                     /locus_tag="WHG62_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ1724424.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(13184..13594)
                     /locus_tag="WHG62_000253"
     CDS             complement(13184..13594)
                     /locus_tag="WHG62_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ1724425.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(13608..14045)
                     /locus_tag="WHG62_000254"
     CDS             complement(13608..14045)
                     /locus_tag="WHG62_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ1724426.1"
                     /translation="MKISIFWLYNAFILKRSIMPKSLSLQDVQLRFSSKFPDKTVLKF
                     TKNYEPVTIQCPLHGSVVYGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGE
                     IYEFASTLAASKFIGCSNSTLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(14464..15762)
                     /locus_tag="WHG62_000255"
     CDS             complement(14464..15762)
                     /locus_tag="WHG62_000255"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ1724427.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDVVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVEACKPIYETMPGWRESTFGVKDYGA
                     LPENAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(15865..17016)
                     /locus_tag="WHG62_000256"
     CDS             complement(15865..17016)
                     /locus_tag="WHG62_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ1724428.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTETVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAIERQPAVLVDAE
                     DAEAAHEAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            17351..18730
                     /gene="norM"
                     /locus_tag="WHG62_000257"
     CDS             17351..18730
                     /gene="norM"
                     /locus_tag="WHG62_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ1724429.1"
                     /translation="MLLDLNRFSFPVFLKEIRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEVGETGRQGIW
                     FGLILGIFGMVLMWATITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            18909..19949
                     /gene="murB"
                     /locus_tag="WHG62_000258"
     CDS             18909..19949
                     /gene="murB"
                     /locus_tag="WHG62_000258"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ1724430.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTEAFVELANADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKEHFVPNLGYGDLAAAVAERCAGREITAKEVS
                     DAVCAVRRRKLPDPGILGNVGSFFKNPVVGAGKAAALLQQHPDMPHYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDKQALVLVNKNNASANDVRQLAQHIKFTVFAQFQVELH
                     AEPNWLPASFSL"
     gene            19961..20611
                     /locus_tag="WHG62_000259"
     CDS             19961..20611
                     /locus_tag="WHG62_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ1724431.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLAYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            20666..21463
                     /locus_tag="WHG62_000260"
     CDS             20666..21463
                     /locus_tag="WHG62_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ1724432.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTIDLNQDSAFQSANLARDTSFWRHHANKPVWFCLLPPSSLTHYADTVKQWA
                     ELARACNVQHLIFTSSTSVYGDTARECDEIALPDPQTESARQILAAEQHLLDSGVPNI
                     DILRLGGLYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPSGRRLKN
                     IIEPRHPTRREFFTEEAAKLGLPAPDFAPDDSVGKIIRTVCDNGLSL"
     gene            21514..22080
                     /locus_tag="WHG62_000261"
     CDS             21514..22080
                     /locus_tag="WHG62_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ1724433.1"
                     /translation="MSAFLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            22100..22990
                     /locus_tag="WHG62_000262"
     CDS             22100..22990
                     /locus_tag="WHG62_000262"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ1724434.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            23015..23773
                     /locus_tag="WHG62_000263"
     CDS             23015..23773
                     /locus_tag="WHG62_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ1724435.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITSE
                     NRWESDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(23828..24493)
                     /locus_tag="WHG62_000264"
     CDS             complement(23828..24493)
                     /locus_tag="WHG62_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ1724436.1"
                     /translation="MAVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYAEMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(24693..25589)
                     /locus_tag="WHG62_000265"
     CDS             complement(24693..25589)
                     /locus_tag="WHG62_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ1724437.1"
                     /translation="MQLLKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTIARLTMTVYLPAEQKGTHMS
                     RFVALMEQHAEALDFAQLRKLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLD
                     YDVCLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            25658..26815
                     /locus_tag="WHG62_000266"
     CDS             25658..26815
                     /locus_tag="WHG62_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ1724438.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQQGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKVLAA
                     KAKATGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAIAGPMDCWLVLRGIKTLALRMEAHCKNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAKTQMPKGIGGVVAVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSVGIEDVDDIWNDISAALDTTL"
     gene            complement(26878..27879)
                     /gene="hemB"
                     /locus_tag="WHG62_000267"
     CDS             complement(26878..27879)
                     /gene="hemB"
                     /locus_tag="WHG62_000267"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ1724439.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(28062..28346)
                     /gene="yhbY"
                     /locus_tag="WHG62_000268"
     CDS             complement(28062..28346)
                     /gene="yhbY"
                     /locus_tag="WHG62_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ1724440.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            28456..29076
                     /locus_tag="WHG62_000269"
     CDS             28456..29076
                     /locus_tag="WHG62_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ1724441.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINDKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGSSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            29140..31107
                     /gene="ftsH"
                     /locus_tag="WHG62_000270"
     CDS             29140..31107
                     /gene="ftsH"
                     /locus_tag="WHG62_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ1724442.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            31328..31759
                     /locus_tag="WHG62_000271"
     CDS             31328..31759
                     /locus_tag="WHG62_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ1724443.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            31752..32030
                     /locus_tag="WHG62_000272"
     CDS             31752..32030
                     /locus_tag="WHG62_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ1724444.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            32083..32661
                     /gene="pth"
                     /locus_tag="WHG62_000273"
     CDS             32083..32661
                     /gene="pth"
                     /locus_tag="WHG62_000273"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ1724445.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPTTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            32722..32928
                     /locus_tag="WHG62_000274"
     CDS             32722..32928
                     /locus_tag="WHG62_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ1724446.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            32925..33287
                     /locus_tag="WHG62_000275"
     CDS             32925..33287
                     /locus_tag="WHG62_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ1724447.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            33518..34933
                     /locus_tag="WHG62_000276"
     CDS             33518..34933
                     /locus_tag="WHG62_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEZ1724448.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLMILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GLLLNILCVVLVALWAYAVLV"
     gene            35052..35561
                     /locus_tag="WHG62_000277"
     CDS             35052..35561
                     /locus_tag="WHG62_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ1724449.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNEKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            35728..37110
                     /locus_tag="WHG62_000278"
     CDS             35728..37110
                     /locus_tag="WHG62_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ1724450.1"
                     /translation="MASIARDIFKAYDIRGIVGKTLTDEAAYLIGKAIAAKAAEKGIT
                     RIALGRDGRLSGPELMEHIRRGFTDSGINVLNVGMVATPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLSIIEKDGFAAAGKQGSVTEKDISGEYLKHI
                     TGHIRLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGTFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSAMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(37130..37885)
                     /locus_tag="WHG62_000279"
     CDS             complement(37130..37885)
                     /locus_tag="WHG62_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ1724451.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVCKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(37895..38611)
                     /locus_tag="WHG62_000280"
     CDS             complement(37895..38611)
                     /locus_tag="WHG62_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ1724452.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(38601..39428)
                     /locus_tag="WHG62_000281"
     CDS             complement(38601..39428)
                     /locus_tag="WHG62_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1724453.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            39713..40621
                     /locus_tag="WHG62_000282"
     CDS             39713..40621
                     /locus_tag="WHG62_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ1724454.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT         9768 a        11000 c         9978 g         9917 t
ORIGIN      
        1 taacttttat taacgcatgc tctcctatgg ttgccgttgt cgacatcatt attgatttag
       61 caggaaacag cttgccgccc ttaactgcgc tttttgatat atgcttcaat gaattatcta
      121 aaatacggcc attttcccta atatcttcca ttctaaacca agggattgag ccattttccc
      181 aatattcttt atttgatttg gaaggggtat agccattctt caagtcaaac acctccccca
      241 acgtcttcca aaccacatct ttcagacggc ctttatagcc atcagctatc cccccccgat
      301 ttgattgtca aaatctaaaa gaaagtcgcg gtaataccgg tattggcgtt tgcgcagggc
      361 taattcagct tccaactcgg tgaatttgtc aagtattttt acaatttttt gttgggtttc
      421 caggggtggg atagggatta ataatttttt caagttactg gcatttagag caggaatacc
      481 tgtaaatgta cataaggcat gaatctcttg ttcaaattca agtaatatat gatagagaaa
      541 acgaacatcc aattctgttc tattcttaat agtaactgca taatttaagt tgccacgaaa
      601 atatcttcct tcttgccacg ttattgagcc gactcccgct cctcttgttg tgatgccgat
      661 agggtcattt tcagtgttcc attcatcaat atagccaagc ggctctttgc cactgttaat
      721 aactggataa ctaccaatat tatttgagat tttctgctta cttacagctt gtcctgtttt
      781 tatgatagct atcccatttt ctccacccaa cggcttccac tccaccggtg ccgtctgaat
      841 catctcaatc aattttttcg ctttgctttg catatccatg gttgttttcc gtttctttcc
      901 cgctgtggcg ggatgtgggg cggttgtggg gtgcttcggc tcactctgtc cgtttgccgt
      961 tatttctgcg ggctgaagtc cgtcctgctt tcaggctgcc tgcaatggtg tgcaggctgc
     1021 tttttcaggt agcctgaatg gtagttattt tgtgcggtct tttttctgtt tgatctgttg
     1081 cacggctgtt ttttccaacg ctttaacgct ttccagatag gcttgctcca ccggcgacag
     1141 gatgcgcgct tcataggcgc ggtattcgcg ttcggctttc tgctctgcct gtttgcggct
     1201 gatgctgcct gcaccctgta atgtgccttg tccgtacagc ccggaaaatt tgtccaattc
     1261 ggctatccag tcgcgcatat acatggggct ttgctcctgc gctttgattt ccgctaggtc
     1321 gaagaaggcg gaaaccagac ggttcaggcg gaacagttcg tcttcggtca gatagttttt
     1381 ggcgattttg gcttcattca gcgtggggat tgcgccttga aaggtggtca gccccataaa
     1441 gtctttgctg ctgtcggcac ggctgtatat cagctcagct gcggtttgcc ggctggcggc
     1501 atagtgcagt ttgttttgaa cggcggcaaa aaaggtttgg ctttcgctgc ttttggggtt
     1561 gtagtcttgg ctggtggcat ataaatcaag cacttgccgg tatagggctt tttcgctgct
     1621 gcggatgtcg cgaatgcggt tgagcagttc tttccaatag tcgccgccgc ctgtgccttt
     1681 caggcgttcg tcgtctatgg caaagccttt ggtcagatat tcgtccagcc gttcggttgc
     1741 ccattggcgg aattggatgc cccgcgcgga acggacgcgg tagccgacgg caataatcat
     1801 gggcagggaa taatgggcga ttttgcggtt taccttgcgc ccgttttcat tttgaactgt
     1861 caactggaag ttgacagttg ccttctcttc caattcttgc tctgcaagaa tggttttaat
     1921 gtgtttgctg atattttgtt tggtggtttg gtacagttct gccatgtccg cctgcgtcag
     1981 ccaaagctgt ccgccaaatt cctgcaaggc aaattgggca gtgccgtcgt tggcggtgta
     2041 taggatgatg ctcatgcttc aatctctgca atcacttcgt caatttcacg ccgcagccgt
     2101 tcgattttgg caacggtttc gctgatttcg gcgttaagct gtttgatgtc gataatttcg
     2161 cgggtgtctt cgggttcaac atagttgctg acggcgaggt tgtagccgtt gtctttgacg
     2221 gtttgctggg cggcgttttg ggcgatatgc ggcacatcgg ctttatcggc gaagagtttg
     2281 acgatttcgg caatgtgttc ttcggttaag acgttgttgt tggtttcttt tttaaagaag
     2341 ccgcctgcgt cgatgaattg gatgtcggta ttgtctttgt gtttggacaa aaccagtata
     2401 ttgacggcga tgccggtgcc gtaaaagaga ttgggcgcaa gggcgatgac ggtttccacg
     2461 tagttgccct ccaccagata ttggcggatt ttctgctctg cgccgccgcg atagaaaatg
     2521 ccggggaatg agacgatggc ggcgcggcct ctgccggaaa ggtagttcag tgcgtgcaga
     2581 atgaaggcaa aatcggcttt ggatttcggg gcgagtacgc ctgcaggggc aaagcggtcg
     2641 tcgttgatta aggtggggtc gccgctgcct atccagttga tggaataggg cggattggaa
     2701 acgacggcat caaagggttt gctgtctttg agtttgggat tggtcagtgt gtcgcccaat
     2761 tcgatgtgga atttgttgta attgacgttg tgcagaaaca tattcatgcg ggcgaggttg
     2821 taggtggtgt ggttgatttc ctgcccgaag aagccttctt cgatgatgtg ctcgtcaaac
     2881 tgttttttcg cctgcaagag caggctgccc gagccgcaag ctgggtcgta gattttgttt
     2941 actttctcct gcccgtgcac cgccagccgc gcaatcagct tggatacgct ttgcggggtg
     3001 aaaaattcgc cgccggattt gcctgcgttg gcagcgtagt tggaaatcag gtattcgtag
     3061 gcatcgccga aaaggtcgat gtggtggtct tcaaaactgc cgaaatcgag ttccgccacg
     3121 ccttttagga cggcggcaag gcgtttgttc ttgtcggcaa cggtgctgcc gagccggctg
     3181 ctggtggtgt cgaagtcgtc aaacaggcct ttaatgtctt gttcggacgg atagccggag
     3241 gcggagcttt caatcgcggt aaaaatttct ttcagcttgg tgttgagctc ttcgttttga
     3301 tgggcttcgg cggcaatatt gcaaaaaagc tggccggggt agatgaaata gcctttgact
     3361 ttgacggcat cgtctttgat ttcgggcgtg atgatgctgt ccggcatagc ggcgtaatca
     3421 atactgctgt cgcctgcctg catatagtcg gtaaagtttt cgctgataaa gcggtagaaa
     3481 agtgtgccga gaacgtattg tttaaagtcc cagccgtcca ccgcgccgcg tacttcgtcg
     3541 gcaattttcc aaatttggcg gtgcagttgg gcgcgttgtt gcatttcggt catcatcgaa
     3601 atccatataa aagttaaaca aatcgaaatc gcctgatatt ttcagacgat tttttacggg
     3661 cattcaaatt aagccaaatt ttccagcatc catttgacgt agcgctcgac gcctgatttg
     3721 acatcgaaaa attcttccgt ataacctgcc tcacgcaatt tggtgatgtc ggcttgagtg
     3781 aagctttggt atttgccttt gagcgcatcg ggaaatggga tgtagcggat aagttcttct
     3841 tctaccagct ctttcaagct catttcgggt ttgccttcgg cggcgcggca ggcgttgacg
     3901 gtggcggcgg cgagttcgtt gaactgttgg ctgcggccgg tgccgaggtt gtagatgccg
     3961 gaaagttcgg gatggtcgaa gaagtagagg ttgactttgg caacgtcttc gacgctgaca
     4021 aagtcgcggg tttgttcgcc gttgccgtag ccgtcgttgc tgccgaacag gttgacgtaa
     4081 ccgtgttcgc ggtattggtg gaaatggtgg aaggcgacgg atgccatacg gcctttgtgt
     4141 tgttcgtgtt gtccgtacac gttgaagtag cggaagccga cgacttgggc ggtcaagcct
     4201 tctttcatgc ggcggcgcaa tacttggtca aacaggaatt tggaatagcc gtacacattg
     4261 agcggttttt cgagttcgcg ctcttcacgg aagatttcgc ctttaccata cacggcggca
     4321 ctggaggcat aaaggaaggg aatgcgttcg tcctgacacc agtccaacaa atccagcgtg
     4381 tactggtagt tgttttccat catatacaaa ccgtcgtgat tcatggtgtc ggaacacgcg
     4441 ccttgatgga aaacggcttc gatgttttga taaggtaaaa tgtgttccct cacttggcgg
     4501 atgaattcat gtttgtcgag ataatgggcg atttcgcact cggcaaggtt tttgaatttt
     4561 tcgcctttgc tcaaattatc gacggcaaca atgtcagtaa taccgcgttg attaagtgct
     4621 ttgacgatgt tgctgccgat aaagccggcc gcgcctgtta cgatgatggt catattcggt
     4681 ttcctttgtt ttgagtaaaa ttaataaact tagttacaag aaatcatcga tattgtcctg
     4741 aaacacaaat ttgcgatgat attccaaata tttttctctt ccttcgggat atattctcat
     4801 cttaattttt tgcatttgga ttgatattaa gtttttccca tgtgtaacgg cttagtcgag
     4861 taccgcaaat caaacgacca tcatccaaga aagtaatata accttgatcg aacaaccaat
     4921 cataagtcgg cgttaaagct aacccattta aataatctaa tgcctctttc tcatttttct
     4981 cagtaataca aaccatataa ggtttaatat gactagccct taacaaaatc tcatctgtaa
     5041 ttaatgtaaa tggacattgc ggcatatgat ttataacatc cttgcgatat ttctgctgcc
     5101 cttttctact tttctgttta atgatttctt gctctacgaa ttgattaaat tctgaagccg
     5161 gtatttctaa tttttctctt gataagagtt gcgggtgcac gatagagcga aattgataat
     5221 ccaaaaatat tcggaaataa aataatggtt ctgaatcttc tatatctttg acaggcaata
     5281 gtttaagaat tgataaataa ctaattttgg gcaatacaat cttacgccaa attgaccata
     5341 tatcatcctc cgaacggata taacccctac ggtaaccttt agaattttcc aaatggtctg
     5401 atacatcatg gattgaaaag aaaatatttt ctgtaggcag attattaata cttaaaacgt
     5461 aatcatcata aaaccttgaa atatcatgat gatatttctg ttcttgtttg tgatattcaa
     5521 cttttgcatc aaccaaataa cgctgtaaat ttttcttatt aaaaaaacaa tttttctgaa
     5581 tgaaaggata ttctaccctc cttccatttt ttgtctcagt aatcccccaa ttttcatact
     5641 caaaaaatgt acttagtttt cgaccactat catcaatata actacctaca tatttgcgtg
     5701 cttccccatt accaccaaaa acagataact tgttattcct gtgaataaaa ctatcttccg
     5761 cacgtaaatt ttgaatacta tcgacaataa aatactctat gttttcaata gtaattcttt
     5821 gaaaatccgg cattttactc tccataaagc gtaatatcca tttgttttaa tatagcgatt
     5881 aatacatcaa caacaatact gtttcccgct tggcgataca tttgagtatc actaactaaa
     5941 attttaaaat catctctaaa acccattagc cgcaaacatt ccctaggtgt taatttacga
     6001 atacgtccac gattatgagt aacataatta tcaaccccgg cacgatgcat tttatgcata
     6061 gtttgcaata atgggcgagc tacaggcaaa tcagtttccg tactggtttt aaaatttttt
     6121 gttcctcctg ccaaaacata atttttgatt ttttcagaaa gataatattt ttcctcaacg
     6181 ttatttacat caaaaataaa gtcatcaaat tcagattcgc gggctgcctg aaaaataaaa
     6241 tcaccatgcc aattaaattg ttgatttgct ttttggcata aggcaatttc tccattaatc
     6301 tgtgtataac gtttttgtct atttttagaa ctggtaacaa atttcacacc cttttcacgt
     6361 aaaaaatatt tgctatcagt atagtcctcc aaaaaatctt gcatagtatg ttctaattca
     6421 atcttttcag gaaactgaaa accatttata ggaggggtat gaaagccaac aacaaaaata
     6481 cgctcacgat gttgaggaat cccataatcc ttactattca ttatttggaa atataagtca
     6541 taaccaagtg aataaaaaac actttttaca actttccaag tttttccatt atcatgattg
     6601 agcaagccct ttacattttc ataaataaat atctttggtt ggacttcatc cacaacgcga
     6661 gcaaattcat agaataatgt tcctcgtgta tcttctaatc ctgcacgttt gccaaccatg
     6721 gaaaatgctt ggcaaggact gcctccaact aaaatatcaa cttgatttct aaactttctc
     6781 gcatcaaatt gagtaatgtc gttatgccaa aaatcttcat ttaatttata gtttccaaga
     6841 taactttttt taacgtatgg atcaatatct cctgcaaaaa caatggtatg gtttaaattt
     6901 aatcggtgga atgcctgttc aaccgcacca atcccgctga atacggttgc taatctaata
     6961 tgtgaatcag gtttaagaaa agttttagat ttccaacctt gttgactggg aaagagcaaa
     7021 gttttttgta atcgagtatc gtgtgtctgt gccattgtcg aaatagtcat acttatatcg
     7081 ttctgtttat cttatcaata tgaaaactac attgttgatt gccctgacaa tgccttgatc
     7141 aattcggcaa acgagcaaac cgccgtaccg agtttcgcca cgacaacccc ggccgcagta
     7201 ttggcaaggt acatggcttc gggcatggtg cagcctgccg ccaaacccaa gcccattccg
     7261 gcaatgacgg tgtcgcccgc accggatacg tcgtaaactt cttgggcgcg ggtgggctgg
     7321 taaatcggtt cgccttcgct gaacaaggtc atgccttctt cgcttcgggt cagtaaaacg
     7381 gcggtcaggt cgaggtggcg gcgcaggttt tgcgcttttt cggtcagctc gctttcgttt
     7441 ttccaactgc cgaccacttc tttcaattcg gcgcggttag gcgtaatcag agttgcaccg
     7501 acatattttt cgtaatcgtc gcctttgggg tcgattaaga cggttttgcc ggcgtgtttc
     7561 gcccaatcga tcatatcgga gatatgcgac aggccgcctt tgccgtagtc tgaaaaaatg
     7621 attgcgtcgt attcgggcaa gatttcgcgg tatttctgct tgatttgttc caacacttcg
     7681 cagttgggat gttcttcaaa atcaagacgg ataagctgct ggttgcgggc gacgacgcgc
     7741 agtttgacgg tggtggcgat ttgtttgtcg cgcatcagat aggaggcgac gccgtcctgc
     7801 accatcagcg catcgagcgc gtcggcggct tcgtcgttgc cggttacgga caacagccct
     7861 gccctgccgc ccaacgaagc gatgttgcgc gcgacatttg ccgctccgcc cgcgcgttgg
     7921 tcgattcgtc cgattttcgc caccggcacg ggggcttcgg gcgaaatacg ggacacatcg
     7981 ccgaaccaat agcggtcgag catcacgtcg ccgacaacca ggactttggc ttgcgcgaaa
     8041 cgggatttga gggtttcttg ttggaacttg gcggacatat tgcctccgtt gtattttttc
     8101 agacggcctc agcctgtaag gccgtctgaa aatcagtttg cttcaaggtt tgccacgcgg
     8161 ttcacttcgc gcaatacggc taccggatcg gcagcttggg ttacaggacg acccattacc
     8221 aaataagtcg aagcggcagc caaggcttcg gccggtgtca tgatgcggcg ctggtcatca
     8281 ttattgccgg caacgtccaa gcggatgccg ggcgtgacca agacaaaatc ttgtcccaac
     8341 tcgcggcgca gcggtgcggc ttcttgggcg gaacagacca cgccgtccaa gcccgaactt
     8401 tgcgccagtt ttgccaagcg gatgacttgt tcttcagggg cggtgttcaa accgatttcc
     8461 gccaaatcgc tttgttccat gctggtcaac acggttacgc cgattaagag cggctttgta
     8521 ccgtatccgg caacggcttc tgctgcggct tccatcatac ggcggccgcc cgatgcgtgc
     8581 atatcgacca tccaaacgcc catatcggca gcgactttgc aggcttgcgc gacggtgtgg
     8641 ggaatatcgt ggtatttcaa atcgaggaaa agtttgaaac cttgattgat taagctttct
     8701 gccaaattgc gtcccgtcgc ggtaaacagc tctttgccga ttttgatttg acacaatgtc
     8761 gggtcaaggt tgcggacgaa tccgagcgtg tctttttcgt tggaaaaatc aagggcgacg
     8821 atgacggggg tgcgttgttg cggagtttgg aagtcggaga ttaaaggatt catggtgttt
     8881 tcgtttcggg ttttcagacg acctttatcg tctttttcgc agtatagtgg attaacttta
     8941 aaccggtacg gcgttgtctc gccttagttc aaagagaacg cttctctaag gtgctgaagc
     9001 acaaagtgaa tcggttccgt actgtttgta ctgcctgcgg cttcgtcgcc ttgtcctgat
     9061 ttttgttaat ccactataac aacgtaaatt caaaccgtag gtcgggcatt gatgtccgac
     9121 ctacgcggac tcaagcctcc gacaaactgt ttcggataaa tttgaaccgg tacatcagcc
     9181 gtcattcccg cgcaggcggg aatccattga taaaactcag ttcatcagat ttaaacagcg
     9241 attgcccaaa ttcagaaatg gattcccgcc tgcgcgggaa tgacgccaaa tgattatttt
     9301 tcggttgcaa cacgctgttt atcaaaaaca ggtcgtctga aaacctgatt ttctgttttc
     9361 agagtgcgaa gcctgcccgt gggtacgacc ttttcgattt atttgcccaa tgcgcccaat
     9421 acttcggctt tcacggcttc taccggctga gtgccgtcaa ctttgatgta tttaggcgcg
     9481 tgttcgcctt ccagtttgct gtaaaaatcg accaaaactt cggtttgctc gtggtaaacg
     9541 gcaaggcgtt ttttcacggt ttcttctttg tcgtcgtcgc gctgaatcaa atcttcgccg
     9601 gttacgtcgt ctttgccttc aactttgggc gggttgtagg taacgtggta agtacggccg
     9661 gaagccaaat gcacgcggcg gccgctcatg cggtcgacaa tcacgctgtc aggcacatcg
     9721 atttcaacga ctgcatccaa atccacgcct gcttcaacca tcgcttcggc ttgtgccaat
     9781 gtgcgcggga aaccgtcaaa caggaaaccg tttttgcagt cgtcttgcgc gatgcgttct
     9841 ttgaccatgc cgataatgat gtcgtcgcgc accaagccgc cttcgtcaat gatttttttc
     9901 gcttccaaac ccaagggcgt gcctgcctta atcgcggcac ggagcatgtc gccggtagag
     9961 atttgcggaa tgccgaacgc tgcggtgatg aattgcgcct gagtgccttt gcccgcgccc
    10021 ggtgcgccta aaagtaatgc tttcatgaag tgatcctttt aaatgtgttt attggaatca
    10081 aacagatggt ttacgattct acacggcttg gcacaatagt tcaaaaacca actgcacaaa
    10141 ctgccatttg caagcaaatg ttttgcatac ctttgccgag cctgatattc acaaggcggc
    10201 aactttttgg gacaatcccc aaaatttcaa aacatcacac cctaccaaaa aggaacatcc
    10261 gtgaaacgca tttttctgtt tttggctacc aatatcgctg ttttggtcgt aatcaacatt
    10321 gttttggcgg ttctgggcat caacagccgg ggcggcgcgg gcagcctgtt ggcgtattcc
    10381 gccgtcgtcg gcttcagcgg ctcgattatt tcgctgctga tgtccaaatt catcgccaaa
    10441 caatcggtcg gtgcggaagt catcgacacg ccgcgcaccg aagaagaagc ctggcttttg
    10501 aacactgtcg aagcccaagc gcggcaatgg aacctgaaaa cgcccgaagt cgccatctac
    10561 cactcccccg aacccaatgc ctttgccacg ggcgcatcga gaaacagctc cctgatcgcc
    10621 gtcagcaccg gtttgctcga ccatatgacg cgtgacgaag tggaagccgt attggcgcac
    10681 gaaatggcac acgtcggcaa cggcgatatg gttacgctga cgctgattca aggcgtggtc
    10741 aatacctttg tcgtgttcct gtcgcgcatt attgccaacc tgattgcccg aaacaacgac
    10801 ggcagccagt cccagggaac ttatttcctg gtcagcatgg tattccaaat cctgttcggc
    10861 ttccttgcca gcttaattgt catgtggttc agccgacaac gcgaataccg cgccgacgcg
    10921 ggcgcggcaa aactggtcgg cgcgccgaaa atgatttccg ccctgcaaag gcttaaaggc
    10981 aacccggtcg atttgcccga agaaatgaac gcaatgggca tcgccggaga tacgcgcgac
    11041 tccctgctca gcacccaccc ttcgctggac aaccgaatcg cccgcctcaa atcgctttaa
    11101 accgatttga aacggcaaaa accgtacgcg caagcagtac ggttttttgt atatgctgtc
    11161 tgaaaacatc aggtttccat accgacacca accgtatcca tttccgcacc ggatacgccg
    11221 cattgatata ccctgataaa ccgtatccgg acagaaaata tagtggatta acaaaaacca
    11281 gtacggcgtt gcctcgcctt agctcaaaga aaacgattct ctaaggtgct gaagcaccaa
    11341 gtgaatcggt tccgtactat ttatactgtc tgcggcttcg tcgccttgtc ctgatttttg
    11401 ttaatcccct atatcagata aaacagcggt aaaattgccg tctgaaacca actctgcgcc
    11461 atacgggaca cgctctgcac gtctatttgc ctccgatata tcctccctac tgtaggaacg
    11521 tctgccgatt tgcacgaaat cggcacctct agcacccttc aggatggcgg acgttatccg
    11581 ttcttgggat tctgcaagac ggtcgacggc attatacaga cgctcggtct gatacccttc
    11641 cgaagcaacc tgcttcaggt attccaaata accgtaaccc aacgcccctc cgacaagcag
    11701 ggtcgtcaac gctaccagcg ttgccgaacg gattttaggg ggcatatctt gaagcatatc
    11761 tctaccgaac cgaaccaaag tctctttaaa gtcggactct acacgcgtag aaccctcgga
    11821 aatcttgaag ttcaactcat actgcttccg tttgtccgct gtcaaccgct tgaggttgtc
    11881 atccccgtat tggacggttg acacaaccct gtacagactg tcctgtattt cgaccagcgt
    11941 ctgtgcaaag ttggcggtca taactggatt cccaaccctt gccgccgatt ctgatactca
    12001 aaacggtatc caggcgttcc agcagggctt cgggagacag cagtgcgtat tcttcaatat
    12061 tttccatagg ttgattatag cagaacctta tacctgttac agacaaggtt gtcgggattt
    12121 gaacgtccgt cgagcttggt tcgtatagag ccgtaggggg tgtttagggc tttggcggca
    12181 gcttgtacgc tggggaacgt gagtgtttcg cctgtggcgg tgtcgaggat ggagacaggt
    12241 ttttggtttt ggggaggcgt attttccttc attttaagtt tcccgcactc cggacaccca
    12301 tactttgact ttatagctgt gtcgtaatac aaaagttgga caaccccgtg cgtaggacat
    12361 ctaacactgg aaggtttata aatgccactg aactccaaca attctaaatg tggaaatttc
    12421 tcttgaaagc gtgatttggc ggtatcgaaa gtcattcgct tacccataat ttgtctccat
    12481 aggttatgtg caaatggatt acacaaccaa aatatagaaa ttttcaaatt ttttgagacc
    12541 tacctgaaat cctgcgcaag cacaatgtaa agaaaaatgg tatacgtctt tactaaatct
    12601 ttacataaat taactctaat cgggatttga acgtccgtcg agcttggttc gtaggattta
    12661 gggggttgtg aaccttacct atcgtaccca agcactttgt acctgtttga aataaggttg
    12721 tcgggcgacg ttcgaccctt gagcctgtga ttgatttgtt ggaaatgtac acctaaagca
    12781 gcacctgcgg cagtaacgct tgggaacgtg agtgtttcgt tggtcgttgt gtcgaggatg
    12841 aggaggggct tccctacatt tggaggtgtt tgggtttttg acatcttagc acactcagga
    12901 cacccgtact ttgactttat aagggcatta aatgtcgaat aacgaacgtt cccgtgcata
    12961 ggacaattaa cggttactgg gtaattcaca ccgtcaaagc cggttagaga gatattaggg
    13021 aatatatcag taagttcaga agctgcttgg ttgaaagatt tggccatttg agactccaaa
    13081 attgattgtc aaatggattt aatagcaaat ttataaaaat gtcaaatttt tcgagaagca
    13141 cctgatagtg gcgaggggta tacactgtta aaaagtgtat acgtcattta gtgcagatgt
    13201 gaaccttata cctccctgca agtaaagtct ctgtgtgaac ccgacctttt atacggtcag
    13261 tgatagctgc tgggtttata cccaatgacc ttgcagcaga tgctcttgag gggaatgtaa
    13321 gtgtttcgcc agttacagta tcctccaata ctgtattttt agataattta tctattgtat
    13381 cttctggaat tttgtgggaa ttgacaccat aagatgcaca ttttggacac ccacttttag
    13441 agtccaacat acttttgaat gtagagcaag taaccctccc gtgtatagga cagacgatta
    13501 ccgtcgggta acgaacgcca ttgaactcca caagattcaa atgtggaaat ttagaggtta
    13561 gcttagaaac tgcttgagta aatgtaagtg ccatagtggt tgtgaactta ctttaccaac
    13621 ctataacgat acctaatcaa tcggtcaaac ggagtgcgtc cgcttaaacg tacagctaaa
    13681 gtgctgttgg agcaaccgat aaatttactg gcagccagtg tacttgcaaa ctcgtagatt
    13741 tcccctgtct ctgtgtcctc caacctaatg gcaacggcgt ttggagaggg cttttcggga
    13801 tttcgagtac attcaggaca tcctgttgag gatttcatgg cagcttgtag attcccgtaa
    13861 acaaccgacc catgcaaagg gcattggatt gttaccggtt cgtagttttt agtgaacttc
    13921 aaaaccgtct tatcaggaaa tttactggaa aaccttaact gaacatcttg tagcgagagt
    13981 gattttggca ttatagacct ttttaaaatg aaagcattat acaaccaaaa tatagaaatt
    14041 ttcaaatttt ctctgaacgc actggtatcc gatggagcta aatgtaaaga aaaagggtat
    14101 acgtctttac taaatcttta cacattttaa ctgtatagta tttgacaaac aacaggcata
    14161 ggcgcataat gcacccgtag ttagatagat agatagatag taaggagata accaatgact
    14221 tagcacctgc cccctctctc tcgcgcaccc cgcccctcgc ttgcggctaa tgggctttgc
    14281 gcgacatata cactttcatc tcctgcatgg cttaaccgcc tatgcaatag tacacacatc
    14341 aacaaatcag gctggcacgt cttggcattg gctgacgtac cattgtagcc cgaaatgttg
    14401 ataccctact atttatgacc aacggcggat tagggcttca gacggcaatt ttactgcaaa
    14461 accttatgcg aacggatgat gcagcacaat cgtttcttct cggtcggggc cggtggagac
    14521 gatggcgacc ggcgcgccgc agacttcttc aatccgtttc aaatatgctt tggcgttttc
    14581 gggcaatgcg ccgtagtcct tcacgccgaa agtggattca cgccagccgg gcatggtttc
    14641 gtaaatcggc ttgcaggctt ctaccgcatc agagccgcaa ggcaggatgt cggttttgcc
    14701 gccgtcgggc aattcgtagc cgacgcagat attgatggtt tcaacgccgt ccattacatc
    14761 gagtttggta atgcacatac cggaaatgcc gttgatttgg atggagcgtt tcagggcggc
    14821 ggcatcaaac cagccgcagc ggcgcgcacg accggttaca gaaccgaatt cgtgtccgcg
    14881 ctccgccaaa cctgcgccta cttcgtcgaa caattcggtc gggaacgggc ccgaaccgac
    14941 gcgcgtggta taggctttga cgatgcccaa aacataatcc agcatttgag ggcctacgcc
    15001 cgcgcctgcc gaagccgcgc cggcgaggca gttggacgag gtaacgaagg gataagtgcc
    15061 gtagtcgatg tccaacaacg caccttgcgc gccttcaaac agcagttttt cgccgttttt
    15121 gtttttctcg ttcaacacgc gggacacgtc ggtaatcatc ggcgcaatgc gcggcgcgac
    15181 tttttcgata accgccatca cgtcttccgc tttaaccggt tcggcattgt gcagatgttg
    15241 cagttggacg ttgtaataag caaggacgac atccagtttt tcacgcagtt tttcaggatg
    15301 cagcaaatcg gcggcgcgaa tggcgcggcg tgccactttg tcttcgtagg cagggccgat
    15361 gccgcggccg gtcgtgccga ttttgccttt gccgcgcgat gcttcgcggg cttggtcgag
    15421 cgcgatgtga taaggcagga tcagcgggca ggtcggcgcg attttcagac ggccttcgac
    15481 gtttttcacg cctgccgcgt tcaactcgtc gatttcgccc aacagggctt cgggggagac
    15541 gacaacgccc gaaccgatga agcagtccag actttcatgc aggatgccgc tcggaatcag
    15601 gcgcaaaatg gtttttttgc cgccgacaac caaggtatga cccgcattgt ggccgccttg
    15661 gaagcgcacc acgcctccgg cttcttccgc cagccagtca acgattttac ctttaccctc
    15721 gtcgccccac tgtgcgccga ttactacaac atttttagcc atagccatat aaccttcgat
    15781 attaaaaatt attgcggaaa tccccaaacc ggtgcggctt tgcgccccgc cacgatttgc
    15841 ctttcatccg ccatgaacgg gtatttagcg tttcacgacc tgccaaacgc cgtccgtctt
    15901 tttcagacgg cctgcaagct cttccgaaac attgtgtccg ataccgtaat cgattacgac
    15961 acactgccct tgttcacgca aggcttcgac cgcttcgtgc gccgcttcgg catcttccgc
    16021 atcgaccaac acggcgggct gccgttcgat ggcgggcaaa cgcccgataa agctgcgcaa
    16081 gtcgaaactg aatcccgttg ccgggcgcgc cctgccgaaa tatccgccca atccgtcata
    16141 acgcccgccg cgcgcgaccg cgtcgtggaa atcggcggca taggcggcat acagcaagcc
    16201 cgtgtggtaa ttgtcgacgc gcagctcgga caagtcgata tggatttcac aatcggggaa
    16261 tgcgtcgcac accgcctgca attcgcccaa cgcgccgccg accgccgaca aatccggcaa
    16321 ccgtccgcgc gcgtcggaca acacttcacg cccgccgtac aggcgcggca gcagcgagaa
    16381 tgcttttgcc cacataccgt ccagcttcca agccttgacc tgcgcttcga ccgtctcggt
    16441 atctttatcc tgcatcaagg caagcagcgt tgcagactgc cccgcatcca aatgcgccgc
    16501 atcggacaag gcgcgaaata tgccgatatg ccccagcgaa agcagcactt tgcccatatc
    16561 ggcaattttc atgcttttca gcatcaggtc tatcagctcg atgtcgccac ggatgtcggc
    16621 aaaaccgtac atttccgccc ctgcctgcaa gggttcgcgc atattcagca gaccgtcgga
    16681 ctgcgcgtgc aacaccggac cggcataaca caaccggtta atcccttggt tggcggataa
    16741 aagatgggca tcgatacgcg ccacctgcgg cgtgatgtcg gcgcgtatgc ccaactgcct
    16801 gccgctgagc ctgtccgtta ccaaaatggt tttcagggaa agccccgcat cgatatgcgt
    16861 cagcagggaa tgtgcgtact ccatcagcgg aggctgtacc agttcataac cgtgtacgcg
    16921 gaacagtgcc aacaactgct ccctcgcgct ttcaagctgc cgcgcgttcg tgggcagtac
    16981 gtcggcgata tgttccggaa gctgccatgt ctgcatgaga atctgccttc tattttatcc
    17041 tgtaaacaca aaagactgcc cgatccgcaa tcagacggca tctttgccgc aacgcatcac
    17101 gccgctgtca aaacggcgat gcttctttct gattcagaat ccgaacagcc cctgtccgac
    17161 ggctcaatgc cgtcaagtcg ttaaaaccaa actttaccat aaaatacaca caatctgaat
    17221 atacttttat accctgtatc cgccgtctga cggcacggca tttttttact atataatgtg
    17281 caccattatt tctcatcact tcctgctgcc gttttctgct tcagacggca tttttgttga
    17341 ttgaacactt atgctgctcg acctcaaccg cttttccttt cccgtcttcc tgaaagaaat
    17401 ccgcctgctg accgcccttg ccctgcccat gttgttggca caggttgcgc aggtgggcat
    17461 cggttttgtc gataccgtga tggcgggcgg tgcgggtaag gaagatttgg cggcggtggc
    17521 tttgggcagc agcgcgtttg ccacggttta tattaccttt atgggcatta tggcggcgtt
    17581 gaacccgatg attgcccagc tttacggcgc gggtaaaacc ggtgaagtgg gcgaaacggg
    17641 gcggcagggg atttggttcg ggctgatctt ggggattttc ggcatggtct tgatgtgggc
    17701 gacgattacg ccgttccgca actggctgac cttgagcgat tatgtggaag gcacaatggc
    17761 gcagtatatg ctgttcacca gcttggcgat gccggcggca atggtacacc gcgcactgca
    17821 cgcctacgcc tccagcctga accgcccgcg cctgattatg ttggtcagct ttgcggcgtt
    17881 tgtgttgaac gtgccgctga actatatttt cgtttacggc aaattcggta tgcccgcttt
    17941 gggcggcgca ggctgcggac tggcgacgat ggcggtgttt tggttcagcg cgctggcatt
    18001 gtggatttat atcgccaagg aaaatttctt ccgcccattc ggactgacgg cgaaattcgg
    18061 caaaccggat tgggcggtgt tcaaacagat ttggaaaatc ggcgcaccca tcgggctgtc
    18121 ttattttttg gaagccagcg cgttttcgtt tatcgtgttt ttgattgcgc ctttcggcga
    18181 ggattatgtg gcggcgcagc aggtcggcat cagtttgtcg gggattctct atatgattcc
    18241 gcaaagcgtc ggctcggcgg ggacggtgcg catcggcttt tcgcttgggc ggcgcgaatt
    18301 ttcgcgggcg cgttatattt cgggcgtgtc actggtgtta ggatggatgc tcgccgtgat
    18361 taccgtgctt tccttggtat tattccgttc gccgctggta agtatgtaca acaatgatcc
    18421 ggcggtttta agcatcgccg ccaccgtctt actgttcgcc ggcttgttcc aaccggcaga
    18481 cttcacccaa tgtatcgcct cctacgcctt gcgcggctac aaagttacaa aggtgccgat
    18541 gttcatccac gccgccgcct tttggggctg cggtctgctg ccgggctacc tgctcgccta
    18601 ccgtttcgat atgggcattt acggcttctg gacggcattg attgcctcgc tcaccatcgc
    18661 cgccatcgcc ttggtgtggt gcttggaatt gtgcagtagg gagatggtca gatcgcataa
    18721 ggccgtctga aaactccgcc gattaaaaat atagtggatt aacaaaaacc agtacggcgt
    18781 tacctcgcct tgccgtacta tttgtactgt ctgcggcttc gttgccttgt cctgattttt
    18841 gttaatccac tatagaaacg atgggctgaa gcccgccact ggcaatactc attttaaagt
    18901 tcaaacccat gcaacccatc cgataccgaa ccgaccttac cccctacaac actttcggcc
    18961 tgcgcgccca agcccgagcc tttattgcgc ttgaacacgc cgacgggttg cgcgacatcg
    19021 tccggctacc cgagttcaac cgagatactg ttttatggct gggcggcggc agcaatatcc
    19081 ttttgatgga ggactacgcc ggtctggtcg tacatatgga aaacaaaggc atacgcgaaa
    19141 ttgctcgttc agacggcatg gttctgattg aagcgcaggc gggcgaaatc tggcacgatt
    19201 ttgtcctgca cgccgtcgcg ctgggtttga acggtttgga aaacctgagc ctgattccgg
    19261 gtacggtcgg cgcgtcgccc gtgcagaaca tcggcgcata cggcgtagag gcgaaagatg
    19321 tgattcacag cgtgcgctgc tttgatttgg atacggaggc ctttgtcgag cttgccaatg
    19381 ccgactgccg cttcgcctac cgcgaaagcc tgttcaagca ggaaggtaaa gggcgttatg
    19441 tgattgtttc ggttgtgttt gcattaaaag agcattttgt gccgaacttg ggctacggcg
    19501 atttggcggc agcggttgcc gaacggtgcg ccggcaggga aataacggcg aaagaagttt
    19561 ccgatgcagt gtgcgccgtc cgccgccgca aactgcccga cccgggcatt ttgggcaatg
    19621 tcggcagttt ctttaaaaac cccgtcgtcg gcgcgggaaa agccgccgcc ctgttgcagc
    19681 agcatcccga tatgccgcat tatccacagc cggacggttc ggtcaaactt gctgccggct
    19741 ggctgatcga ccaatgccgt ctgaaaggct tccaaatcgg cggcgcggcg gtacacgaca
    19801 aacaggcatt ggttttggta aacaaaaaca acgcctcggc aaacgatgtc cggcaattgg
    19861 cgcaacacat caaatttaca gtatttgctc agtttcaggt agaattgcac gccgaaccta
    19921 attggctgcc tgcttcgttc agcctgtaaa tccaaggagt atgcccgtga cccgccccgc
    19981 caaaatcaat acttacacac gcatcatcga cgccagcctt gcgctcttca acgaggaagg
    20041 cgagcgcaac atcagcacca accatattgc cgcccacttg ggcatcagtc cgggcaacct
    20101 ctattaccac ttccgcaaca aagacgaaat catcgtccaa ctgttcaaac gttacagcga
    20161 agccctgctt gcctacctga atgaagctgt gttgccgtct gatgtggaag actccatcaa
    20221 ctatatggcg ggcatttacg acgtgatgtg ggaataccgc ttcctattca gcgacgtgaa
    20281 caccctgctt gcacgcagtg ccgaactatt aggcgaacac aatactttca cccaagccaa
    20341 agtctccccg ctcttggtca acctgctgac ccagctcaac ggtctgaaca tcatccaagc
    20401 cgaccaaacc gctatgaacg atctcgccgt caatatgtgg atggttacga aatactggtt
    20461 cgacttcgac agctccctgc gcggccgcac caagctgacc gaagactcca aagcacgcgg
    20521 catccgccgc accttaagcc tccttcgtcc ttatcttttg cccgaacacc gcaagaaata
    20581 cgaccggaaa atcggcaacg gcaacccgta aacccacagc gtccgaatca gccttcagac
    20641 ggcacttacc cgacggtatc agcgaatgcg cgcagtcccc ccgccccata tctccatcac
    20701 aggcctaggt tacctcggcc tgccgctggc acaaaagttt taccaacacg gcagccgcgt
    20761 cgccgccata aaacgcagcc tgacttcgga cgacatcaac ctgcccatac acctcgatac
    20821 catcgacctc aatcaagaca gcgcgtttca aagcgcgaac cttgcccgag atacaagctt
    20881 ttggcggcac catgccaaca aacccgtttg gttctgcctc ttgccgccat catcgctgac
    20941 acattacgcc gataccgtca aacaatgggc agaacttgcc cgggcgtgca acgtgcaaca
    21001 cctgattttc acaagcagta ccagcgttta cggcgataca gcgcgcgaat gcgacgaaat
    21061 cgccctaccc gatccgcaaa ccgagtccgc ccgccaaatc ctcgccgccg aacaacacct
    21121 gctcgacagc ggcgttccga acatcgacat cctgcggctg ggcgggcttt attgcgccga
    21181 acgccatccc gtcagccgcc ttgttcaaaa gcaaaacatc ccgggcggca accgccccat
    21241 caacatcgtc caccgtaata tcgccgtcga aagcctgttt cagacggcat ttaaccccag
    21301 cggcaggcgg ctgaaaaaca ttatcgaacc gcgccacccg acacgccgcg aattttttac
    21361 ggaagaagcc gccaaactcg gcctgcccgc gccggatttc gcacccgacg acagcgtggg
    21421 caaaatcatc cgtaccgttt gcgataacgg cttaagcctg taaaataagc ggcaacagca
    21481 acaaacaggc attctccgcc ccaatcagaa aatatgtccg ccttcctccc catcatcaac
    21541 cgcctgattc tgcaaagccc ggacagccgc tcggaacttg ccgcctttgc aggcaaaaca
    21601 ctgaccctga acattgccgg gctgaaactg gcgggacgca tcacggaaga cggtttgctc
    21661 tcggcgggaa acggctttgc agacaccgaa atcaccttcc gcaacagcgc ggtacagaaa
    21721 atcctccaag gcggcgaacc cggggcgggc gacatcgggc tcgaaggcga cctcatcctc
    21781 ggcatcgcgg tactgtccct gctcggcagc ctgcgttccc gcgcatcgga cgaattggca
    21841 cggattttcg gcacgcaggc agacatcggc agccgtgccg ccgacatcgg acacggcatc
    21901 aaacaaatcg gcaggaacat cgccgaacaa atcggcggat tttcccgcga atccgagtcc
    21961 gcaaacatcg gcaacgaagc ccttgccgac tgcctcgacg aaataagcag actgcgcgac
    22021 ggcgtggaac gcctcaacga acgcctcgac cggctcgaac gcgacatttg gatagactaa
    22081 ccttcagacg gcatccgaca tgaacagccc ttttcacaac atcggcatcg taacccgccc
    22141 caacacgccc gacatccaag acaccgcaca cacgctgatt acctttttga agcagcacgg
    22201 ctttaccgtc tatctcgacg aagtcggcat aaaggaaggc tgcatctata cccaagacac
    22261 cgtcggctgc catatcgtca acaagaccga actggggcaa tactgcgacc tggtcgccgt
    22321 tttaggcgga gacggcacct ttctctccgt cgcccgcgaa atcgccctgc gcgccgttcc
    22381 gattatcggc atcaaccaag ggcatttggg cttcctgacc caaattcccc gcgaatatat
    22441 gacggacaag ctattgcccg ttttagaagg gaaatacctt gccgaagagc gcatcctgat
    22501 tgaggccgca ctcatccgcg aaggcaaaac cgccgaacgc gccatcgccc tcaacgatgc
    22561 cgtcctctcc cgtggcggtg ccggacagat gattgagttt gaagtcttcg tcaatcggga
    22621 attcgtctat acccagcgtt cggacgggct gattgtctcc acccccaccg gatcgaccgc
    22681 ctattcgctt gccgccggcg gccccatcat gcaggcagga ttgcacgcct tcacgctcgt
    22741 ccccatctgc ccgcaatcca tgaccaaccg ccccatcgcc attccagaca cgtccgaaat
    22801 cgaaatcctc gttacccaag gcggcgacgc gcgcgtccat ttcgacggtc aaacccatat
    22861 cgacgtgcaa aacctcgacc gcatcaccat ccgccgctac cgaaacccct tacgcatcct
    22921 acatccgacc gactaccaat atttcaaaac cctgcgccaa aaactgcact ggggcgaaca
    22981 attggtctga accgaccctt accggaaaac acctatgaat ccaaaaactc cccccgacca
    23041 tacagaagat gccgtgcgcc tgtccaaacg catggcgcaa ctggggcttt gttcgcgccg
    23101 cgaagccgac ggctatatcg aacagggttg ggtaacggtc aacggcaaaa ccgccgtact
    23161 cggtcagaaa gtttcgccgg cagaccgtat cgaactaaac aagaaagccc acgaacagca
    23221 ggcggcacgc attaccatcc tgctgaacaa acccgtcggc tatgtcagcg cacaagcgga
    23281 aaaaggctat aaatccgccg ccgaactgat tacctctgaa aaccgctggg aaagtgacac
    23341 cagccgcatc cgtttcgatc cgaaacacaa aatcggtctt gcccccgccg gcaggctcga
    23401 tatcgattca gtcggattac tggtgttgac gcaggacggc cgtatcgcca agcagcttat
    23461 cggcgaaaac agcggcagtg aaaaagaata tttggtgcgc gtgcgcggaa aattggacga
    23521 aaaaggactt gccttactga atcacggatt gagtttggac ggtgagaaac tgcgtcccgc
    23581 ccaagtagaa tggcaaaacg aagaccaact gcgcttcgtg ttgaaacagg gcaaaaagcg
    23641 gcaaatccgc cgtatgtgcg aactggtcgg actgcgcgtc gtcgggctga aacgcatccg
    23701 catgggtaag gtcaagctcg gcaggctgcc gccaggcaaa tggcgttatc ttgctcccgg
    23761 cgaatcgttt taaataagca ttaaaaaatg ccgtctgaac gtccttacgt tttcagacgg
    23821 cattgcctta tgcccaaata acggtttctt ccaagggcct gcgcgctttc gtggcgattt
    23881 cctgaacgcg gtagccgaat gtcgcggcaa cggacacgcc ccattctgcc gcatcgaaca
    23941 aaccgaactg cccggacaat acgcgttcca tctcggcata gttgaaacct tccaccgggc
    24001 aggaatcgat acctgccatc gccgcacccg tcatcatgtt gcccaacgcg atataggtct
    24061 ggcggcaaca ccagtcaaac aaggcgcgcg aatcgtccaa aatcttgatg tcgtcggctt
    24121 gaaacgcctg atacctcgcc aaagattttg ccatggcatc cggttcggta acgccgcgcc
    24181 gtttgaggct ttccaacata aacgggctgt cgaagcgggc atttttcttt gccaaaaaca
    24241 ccaccaaatg actggcggta tccaaagcat ccgccatacc ccaagaaaac ggcttgattg
    24301 cctgtcggat ttcggggttt tgaaccacaa caaactgcca aggctccgaa ccgaccgaac
    24361 tgggcgacaa acgcccgagt tctaaaataa actgaaaatc ctcggcactg attttacgtg
    24421 ccgcatcgta atgccggcat gatttgcggt ttttaaatgc ggatagaacc tgctctttgc
    24481 ttaatactgc catcgcacat cctttcatta cttgtattgc aaattgattt caaaccgata
    24541 cggcactgcc gcaccataca atccgtcctc gccatcaagc ttcatccgga ctttacccat
    24601 ctctctacgg ctgggaaaac aaagcggcgg cagactcggg aataacgccc caatgccttt
    24661 cagacggcat ttgggcatca ttgcaaacgc gcctacgggt aggcgatata ggcataagcc
    24721 gaatggttgt ggatagactc gaaattctcg ctctcgacaa cgaaactctt gatgcgtttg
    24781 tcggcgatca gcgaagtagc gacatcacgc accatatctt ccacgaattt cgggttttcg
    24841 taggcttttt cggtaacata tttttcatcg gggcgtttga gcaaaccgta gagttggcag
    24901 cttgcctgcg cctccacata atcaatgact tcctcaatac cgacttcggc atcggcagtc
    24961 aggctgacgg taacatgcga acgctggttg tgcgcgccat attgggaaat ttctttggaa
    25021 cacgggcaaa gcgaggttac gggaatcatg accttcatac tgtggccgta tgccccgtct
    25081 ttgatttcgc ccgtgagaca gacatcataa tccagtaagg accgaatacc ggaaaccggc
    25141 gcggttttct tgcggaaaaa cggaaaagaa acgctgattt tgccggcgcg ggaatctaaa
    25201 agcgcgacca tttcggcagt cagcttgcgc aattgtgcaa aatccaaggc ttcggcatgt
    25261 tgctccatca atgcgacaaa acgcgacata tgcgtcccct tctgctcagc aggcaggtaa
    25321 accgtcatgg tcagacgggc aatggtggac tggatgcctt ctgcagtttg cagggtaatc
    25381 ggaaagcgca ggtctttgat accgacctga ttgatcggca gattgcgcaa atctcggctg
    25441 gattgcacgt ctgcaatagt gttcatgagt tgtttttcct taatattcat gtaattgttg
    25501 agatgtgtgc atggtatggc gtttccgccg gggaatatac cgtcaatctg caaatgcgag
    25561 attatatcac tcgcttttag cagctgcatt gattgtttct atttttcaga tagtgataaa
    25621 atcttcgatt attcacatct acataggcag agaccaaatg aaattcgcca cgaaagccat
    25681 tcattccagc tacgattgcg acgaacacaa ccgcgcgctg atgccgccga tttatcaaaa
    25741 cagtatgttt gcgttgcacg agattggcga aaatgtgcct taccgttatt cgcgcctgag
    25801 caacccgacc cgtcagattt tggaagacac cgttgccgat ttggaacacg gtgcggcagg
    25861 gtttgcgttt tccagcggta tggcggggat tgatgccgta tggcgtacct tcctgcaaca
    25921 gggcgacacc atcgtcgcgg tcgccgatat ttacggcggc gcgtatgact tattggtcga
    25981 tgtttatcaa aaatgggggg tgaacgttgt ttttgccgat ttgggcaatc ccgataatct
    26041 ggacgagctg ctcaaagcgc acaaggtcaa actggtttgg ctggaaacgc cgtccaatcc
    26101 gcttttacgc ttggtagaca tcaaagtcct tgccgcaaaa gccaaagcga ccggcgcgct
    26161 ggtcggcatc gacaacacct ttgccacgcc gtatctgcaa cagccgttgg atatgggttg
    26221 cgattttgtg ttccattccg ctaccaaata tttgtgcggc cattccgacg tattgatggg
    26281 catcgtcgtt gccaaaacca aagagctggc tcagcctttg cacgatatga tggtgcatac
    26341 cggtgcgatt gcaggcccaa tggactgctg gctggtgttg cgcggcatca aaacgcttgc
    26401 cctgcgtatg gaggcacact gcaaaaacgc actcgaaatc gcgcgccgtt tggaagccca
    26461 tcctgccatt gaaaaagtgt tccatcccgg cctgccgtct cacgaacatt acgaactggc
    26521 gaaaacacaa atgcccaaag gcataggcgg cgtggttgcg gtttatctca aaaacgacac
    26581 gcgtgaagcg gcaaacagcg tgattaaaaa catgaaactg gtcaaaatgg cttccagcct
    26641 cggcggcgtg gaaagtttgg tcaaccattg ctattcccag tcccacagcg gcgtgccgca
    26701 taatgtgaaa atggaaatgg gcatcagggt cggcctgctg cgtttctctg tcggtatcga
    26761 agatgtagat gatatttgga atgatatttc cgccgcactc gatacaactt tgtaaaccgt
    26821 aaaaatgccg tctgaaacca tggtttcaga cggcatttca atattgcgaa tcaaatatca
    26881 acgcttcaac atctttgccg cctcaatagc gtaataggtc aaaatcccgt ccgcacccgc
    26941 acgtttgaat gccagcaggc tttccaaaac cactttgccg ccgtccagcc agccgttggc
    27001 aaccgccgcc tgcagcatcg cgtattctcc cgaaacctga taggcataag tcggcacgcc
    27061 gaactcgtcc ttcacgcggc ggacaacgtc caaatacggc aaaccgggct tgaccatcac
    27121 catatccgca ccttcctgaa tgtccaacgc cacttcgtgc aacgcctcat cggtatttgc
    27181 cggatccatc tggtaggtct ttttatctgc cttgcccaaa ttgcccgaac tgcctaccgc
    27241 atcacggaaa gggccgtaaa acgccgaagc atatttggcg gaatacgcca taatccgcgt
    27301 gtggatatgc ccggcatcct ccaacgcctc gcgaatcgca ccgatacgcc cgtccatcat
    27361 atcggaaggg gcaaccacct gtgcgcccgc ttcagcgtgg cacaaagcct gcttgaccaa
    27421 aacctctacg gtttcatcgt tcatcacata accgttttcg tccgtcagcc cgtcctgacc
    27481 gtgaaccgta taaggatcga gcgcgacatc cgtcataatg cccagttcgg gaaacctctc
    27541 gcgcaaggcg cggacagttg acggcacgag tccttcggga ttgtacgcct cctgcgcacg
    27601 ctcggttttg tttgccgtaa ccacggggaa cagtgccaac atcggaatac cgagctttac
    27661 cgcctcttcc gccgtaaaca gcagcctgtc caaactttga cgcttcacac ccggcataga
    27721 aggcacatcc tcctcgcgcg ccgacccctc caatacgaac accggataaa tcaaatcatc
    27781 ggcggtcagc gtgtgttcgc gcatcaggcg gcgtgaaaaa tcgtccctgc gcatacggcg
    27841 catacgcgaa gccggaacat tgcggtaagg aaactgcata agccctccaa tcatcctgtc
    27901 aacaattcaa accatacgga agccgccgca acttgcagac agcatcgggt ggcaatcaaa
    27961 atccgttttc accggaaagg gtttcggccc gccgaaatgc cgcgccgaag gacggcgtcc
    28021 cgcccattaa agaacaatag caaaacaaca gcttcaggct gtcagccttc gatattctta
    28081 cgccacaata ccaaaagttt cccgatatgc tgaacaggtt gcgcgtcaac cgcctcacat
    28141 aaggcagtgc agatttcgat acgttcggca cggtcgtcgc cgaatacgcg cactttaatc
    28201 agctcatgcg ccgtcaatgc cgcatcggtt tccttgatga ccgcgtccgt cagaccctgc
    28261 tgaccgacca tcacaacagg atggagatgg tgcgcgcgcg ctttcagttc caaaatttct
    28321 ttggtgttca atttggtatc cgtcattttc ctactgcttg aataaaaaga ataatgcggc
    28381 attgtacgcg atttggcacg acatcggcaa aattaacgta caatacgcgg tttccattcc
    28441 gacccgcgaa ccactatggc tgtacgttcc aaatcctcaa aagcgtggct gcacgaacac
    28501 gtcaacgacc actacgtcca tatggcgcaa aaagacggct accgcgcccg tgccgcatac
    28561 aaacttttgg aaatcaacga caaagacaaa ttaatcaaac ccggcacggt acttgccgac
    28621 ttgggcagcg cgccgggaag ctggtcgcag gttgccgcca agctgacggg ttcttccgga
    28681 gcagttttcg ccttggacat cctgcctatg gaagccatag ggggcgtctc cttcattcag
    28741 ggcgacttcc gcgagaacga cgtactggca caattcgaaa ccttgttgga caaccgcccg
    28801 ctcgaccttg taatttgcga tatggcgccc aatatgtcgg gaaacgccgt aagcgatcag
    28861 gcacgcagct tttatctgtg cgaactggct ttagacttcg cctcgcaaca cctgaaaacc
    28921 ggcggcagct ttttggtcaa agtctttcag ggtgcaggct atcaggaata catggcagcc
    28981 atgcgcgaaa ttttcggcac ggtgcagacg cgcaaacccg aagcctcgcg caatcgctcc
    29041 agtgagattt atttattggg caaaaataaa cgctgacaat acagacggcg tgctttacaa
    29101 tcatttccgt tttacacctc aattatggag ccttgctaag tggggaacac ctttaaatca
    29161 atccttgtct gggtcgcctt gggtatcggc ctgatggctg cgttcaacgc tttagacggt
    29221 aaaaaagaag acaacgggca aatcgaatat tctcagttca tccaacaggt caacaacggc
    29281 gaagtatccg gcgtcaacat cgaaggatcc gtcgtcagcg gctacctgat taagggcgag
    29341 cgcaccgaca aaagcacctt cttcaccaac gcgcctttgg acgacaacct gattaaaaca
    29401 ctgctcgaca aaaacgtccg tgtaaaagta acgccggaag aaaaaccgag cgcgctggct
    29461 gccctgtttt acagcctgct gcccgtcctg ctgctgattg gcgcgtggtt ctactttatg
    29521 cgtatgcaga cgggcggcgg cggaaaaggc ggcgcattct cattcggcaa aagccgcgcc
    29581 cgcctactgg acaaagatgc caacaaagtt acctttgccg atgtcgccgg ctgcgacgaa
    29641 gccaaagaag aagtgcagga aatcgtcgat tacctcaaag cgccgaaccg ctatcaaagc
    29701 ctgggcgggc gcgtgccgcg cggcatcctg ctggcgggca gcccgggtac gggtaagacg
    29761 cttttggcga aagcgattgc aggcgaagcc ggcgtgccgt tcttcagcat ttcaggttcc
    29821 gactttgtcg aaatgttcgt cggtgtcggt gcaagccgcg tccgcgatat gttcgagcag
    29881 gcgaagaaaa acgccccctg catcatcttt atcgacgaga ttgacgcagt cggccgccaa
    29941 cgcggcgcag gtttgggcgg cggcaatgat gagcgcgagc aaacattaaa ccaattgttg
    30001 gttgaaatgg acggttttga gagcaatcag actgtaattg tgattgcggc aaccaaccgc
    30061 cccgacgtac tcgatcctgc gctgcaacgc cccggccgtt tcgaccgcca agtcgtcgtc
    30121 cccctgccgg acatccgggg gcgcgaacag attttgaacg tccattctaa aaaagtgcct
    30181 ttggacgaat ctgtggattt attgtccctc gcgcgcggca cgccgggttt ttccggtgcg
    30241 gatttggcaa acctggttaa cgaagccgcc ctgtttgccg gccgccgcaa caaagtcaaa
    30301 gtcgatcaaa gcgattttga agacgcaaaa gacaaaatct atatgggtcc ggaacgccgc
    30361 agtatggtga tgcacgaaga cgaaaaacgt gcgacggcgt atcatgagtc cggacacgcg
    30421 attgttgccg aaagcctgcc ctttaccgac cccgtccaca aagtaaccat tatgccgcgc
    30481 ggacgtgcgc tgggtctgac ttggcagctt ccggagcgcg accgcatcag tatgtataaa
    30541 gatcagatgt tgagccagct ctccatcctg ttcggcggac ggattgccga agacatcttc
    30601 gtcggacgca tctccaccgg cgcatcaaac gactttgaac gcgcaaccca aatggcgcgc
    30661 gaaatggtaa cgcgctacgg catgagcgac aaaatgggcg tgatggttta tgcggaaaac
    30721 gaaggcgaag tcttcttagg acgcagcgta acccgttcgc aaaacatttc cgagaaaacc
    30781 cagcaggaca tcgatgcgga aatccgccgg attttggacg agcagtatca ggttgcctac
    30841 aaaatcctcg atgaaaaccg cgacaagatg gaaaccatgt gcaaagccct gatggaatgg
    30901 gaaaccatcg accgcgatca ggtactggaa atcatggcgg gcaaacaacc cagtccgccc
    30961 aaggattaca gccacaacct gcgcgagaat gcggacgcgg cggaagataa cgcgccgcac
    31021 gctccgactc gggaagaaac cgaagcacct gccccggcag acaccgcttc gacagagtcc
    31081 gagcagcagc ctgaaaacaa ggcttaactt cccgaacaaa cggcagcccg caagctgccg
    31141 ttttcccatc ctgttttcag acggcatttt ccgctcaatg ccgtctgaaa cgccaaagcc
    31201 gtatcggttt ttgcggatct gcgatatggc ggtttaaatt gaaatcagac gaggcaaggc
    31261 tgtaccggtt taaaattaaa ccgctataat accgcccttc gaatacacgc ccgcattggt
    31321 gatgcctgtg aaaaaagttg aaaaaaacat cttggtgctg cacggcgcgg acaaaatgtt
    31381 cgagctggtc gataaggttg aagactatcc gcactttctg ccgtggtaca gcaagaccga
    31441 ggtcatcggg cgtagcggca acgaactgaa ggcgcggctg tttatggact atatgcacgt
    31501 tcgccaatca ttcgccacgc acaaccgcaa cattccgggc agggaaatcc gtatggaact
    31561 gctcgagggt ccgttcaaaa ccttacgtgg aacgtggaaa tttatcgatt tgggcgacga
    31621 tatgtgcaaa atcgaattca atttggaata cgatttttcc aatgccgttt tgtccgcctt
    31681 aatttccccc gtcttcaacc acctttccgc cacgctggtc gaagcgttcg tcaaagaggc
    31741 agaccgccgt tatgcttgaa attgagattg tgtacgggct gcccgaccga caggttttga
    31801 aaaccatgca gcttgccgag ggaacaaccg tccgcgccgc cgcactgcaa agcggtttgg
    31861 acggcatatt tgaagattta aacctgcatt ccgcgccttt gggcattttc ggcaaagccg
    31921 tcaaagacga cacgcccctg cgcgacggcg accgcatcga agtgtaccgc ccgctgttga
    31981 tcgaccccaa agaagcgcgc cgcaaacgcg ttcaaaatca agaagaataa ccatgccgtc
    32041 tgaagccttc agacagcatt cgacagaaac acggaaaata tcatgtcaaa caaaatcaaa
    32101 atgcttgtcg gattgggcaa ccccggcaaa gaatacgaac aaacccgaca caatgcaggc
    32161 ttttggttcc tcgacgaact ggcttggaag tggaaggctt catttaaaga agaaaaaaaa
    32221 ttcttcggcg aagtcgcccg tgccgccctg cccgacggcg atgtctggct gctcaagccg
    32281 accacgttca tgaaccgttc cggacaggcg gttgccgccc ttgcgcagtt ctacaaaatc
    32341 aaacccgaag aaatcctcgt cgtccacgac gaactcgaca ttccctgcgg acggattaaa
    32401 ttcaaactcg gcggcggcaa cggcggacac aacggcttga aagacattca ggcaaaactc
    32461 ggcacggcag actattaccg cctgcgcctc ggtatcgacc acccaggcga ccgcaacctc
    32521 gtcgtcggct atgtcctgaa caaacccagt acggaacacc gccgacagat tgacgatgcc
    32581 gtcgccaaat ccctgcaagc catacccgac atccttgccg gcaaatggga agaagcaacc
    32641 cgcttcctgc acagcaaatg acccgatgcc gtctgaagcc ctttcagacg gcatgttccc
    32701 gatttccata tccgaacagt catgaccgaa ctcaagcagc ttatccaaac cgaatccatc
    32761 cccgtcatcg aagaaaccct cgatttcctg ctgtacgaat gcagcatcga cgacgcacca
    32821 tccgccgaag aagtggcaca atggcgcgac atacttgccg cacgcggcgg caaattcctg
    32881 cgcctgtcca aaatctgcca aacgtggctg gacgaggagg cggcatgaag ctgccgcgca
    32941 accgcttcag cctgctttcc gcattgtggt ttgccggcgg catctattcg ctgctcttca
    33001 aagctgccga caccgcgccg ccgccgtttc cgcatttcga caaagcagca caccttgccc
    33061 tgtttttcgc acaaatctgg cttttgacca aagcattcaa aaccggaaaa cttcccatcc
    33121 cctaccgcag cctgatggtc tttgccctct gtttcgccct cttcagcgaa tgcgcgcagg
    33181 catggtttac cgcaacgaga accggcagtt tgggcgatgt tcttgccgat atggcaggta
    33241 cggttctcgc actctttgcc gcccgcgccg ccgaccgccc ggactgaatc ggtttatttc
    33301 ccccaaacag gatgcacctc ttcccgatac atcctatttt tccccttaca tatcaatccc
    33361 atctcataaa caaaaccgac aaatcgttta caatatattt acactacatc agattacaaa
    33421 tatactcgaa ccagttgcag aatcggcggt tccacaaacc gtttcggatt gcacgacaca
    33481 aaagaaaaac cgattttatt gccttaaagg agtattcatg aacctgcatg caaaggacaa
    33541 aacccagcat cccgaaaacg tcgagctgct cagtgcgcag aagccgatta ccgactttaa
    33601 gggcctgctg accaccatta tttccgccgt cgtctgtttc ggcatttacc acatcctgcc
    33661 ttacagcccc gatgccaata aaggtatcgc gctgctgatt ttcgttgccg cactttggtt
    33721 taccgaagcc gtccacatta ccgtaaccgc actgatggtg ccgattctcg ccgtcgtact
    33781 cggtttcccc gacatggaca tcaaaaaggc gatggctgat ttttccaacc cgattatcta
    33841 catttttttc ggcggcttcg cgcttgccac cgccctgcat atgcagcggc tggaccgtaa
    33901 aatcgccgtc agcctgttgc gcctgtcgcg cggcaatatg aaagtggcgg ttttgatgtt
    33961 gttcctcgtt accgcctttc tgtccatgtg gatcagcaac accgccaccg ccgcgatgat
    34021 gctgcctcta gcaatgggta tgctgagcca cctcgaccag gaaaaagaac acaaaaccta
    34081 cgtcttcctc ctgctcggca tcgcctattg cgccagcatc ggcggcttgg gcacgctcgt
    34141 cggctcgccg cccaacctga ttgccgccaa agccctaaat ctggacttcg tcggctggat
    34201 gaagctcggc ctgccgatga tgctgttgat tctgcccttg atgctgctct ccctgtacgt
    34261 catcctcaaa cctaatttga acgaacgcgt ggaaatcaaa gccgaatcca tcccttggac
    34321 gctgcaccgc gtgatcgcgc tgttgatttt ccttgccaca gccgccgcgt ggatattcag
    34381 ctccaaaatc aaaaccgcct tcggcatttc caatcccgac accgttatcg ccctgagtgc
    34441 cgccgtcgcc gtcgttgtat ttggtgtggc gcaatggaaa gaagtcgccc gcaataccga
    34501 ctggggcgtg ctgatgctct tcggcggcgg catcagcctg agcacgctgt tgaaaacatc
    34561 cggcgcgtcc gaagccttgg gacagcaggt tgccgccacc ttttccggcg cgcccgcatt
    34621 tttgatgata ctcatcgtcg ccgccttcat catcttcctg accgagttca ccagcaacac
    34681 cgcctccgcc gcattgcttg taccgatttt ctccggcatc gccatgcaga tggggctgcc
    34741 ggaacaagtc ttggtattcg tcatcggcat tggtgcatct tgtgccttca tgttgccggt
    34801 tgccacaccg cccaacgcga ttgtgttcgg tacaggcttg attaagcaac gcgaaatgat
    34861 gaatgtcggc ttattgctga acatcctctg cgtggtattg gttgcgctgt gggcttatgc
    34921 tgtactggtg taaaccatcg acctaaacaa caaggccgtc tgaaagaata tttttcagac
    34981 ggccttgaag tttgtcgttc agacacaatt taacgaatga tttaaaaccg gattctaacg
    35041 aaaggaaacc catgattatc ctgcacacca acaaaggcga catcaaaatc gaactcgatt
    35101 tcgacaaagc ccccgttact gctaaaaact tcgagcaata cgttaaagac ggcttctacg
    35161 acggcgtaat cttccaccgc gtcatcaaag gcttcatgat tcaaggcggc ggcatggatg
    35221 aaaacatgaa cgaaaaagaa acccgcgatc cgattcaaaa cgaagcgtcc aacggtttgc
    35281 ctaacgaaaa atacaccatc gccatggcgc gtacttccga tcctcactct gccagcgcac
    35341 aattcttcat caacactgcc gacaacgctt tcctgaactt ccgttctaaa gagttgtacg
    35401 gcaaaaccgt cgtccaagac tggggctatg ccgtattcgg taaagtcgtt gacggttttg
    35461 acgttgtcga tgccatcgaa ggcgtttcta ccaaacgtca tggttaccac gacgacgtac
    35521 cgagcgaacc tgtcgtcatc attaaagccg aagcggtata aaccgacaat ccgaaagcag
    35581 cctgcacaaa ggctgctttt atttcagacg gcatgttatt tgatgtaacc gtgctatgcc
    35641 gtctgaaaac cggacgcaag ccttcagacg gcataccgct atgttaaaat atgcccgttt
    35701 ttcctaaacg gacacaaagg aaaccttatg gcaagcatcg cccgcgacat cttcaaagcc
    35761 tacgacatcc ggggtattgt cggcaaaacc ctgaccgacg aagccgccta ccttatcggc
    35821 aaagccatcg ccgccaaagc cgccgaaaaa ggcattaccc gcatcgcgct cggacgcgac
    35881 ggacgcttga gcggtcccga actgatggaa cacatccggc gcggctttac cgacagcggc
    35941 atcaatgtcc tcaatgtcgg tatggttgcc actcctatgc tctacttcgc cgccgtcaac
    36001 gaatgcggcg gcagcggcgt gatgattacc ggcagccaca atccgcccga ttacaacggc
    36061 tttaaaatga tgctcggcgg cgacacgctt gccggcgaag ccatccaaga acttttgtcc
    36121 atcattgaaa aagacggttt tgctgccgcc ggcaaacaag gcagcgtcac cgaaaaagac
    36181 atctccggcg aatacctcaa acacattacc ggacacatca ggctcaaacg cccgatgaac
    36241 atcgccattg acgcgggcaa cggcgtgggc ggcgcgtttg ccggcaaact ctacaaaggc
    36301 ttgggcaacg aagtaaccga gcttttctgc gacgtggacg gcactttccc caaccaccat
    36361 cccgacccat ccaaaccgaa aaacctgcaa gatttgattg ccgcgctgaa aaacggtgat
    36421 gccgaaatcg gcttggcgtt tgacggcgat gccgaccgct tgggtgtggt caccaaagac
    36481 ggcaacatta tttatcccga ccgccaactg atgcttttcg cgcaagacgt gttgagccgc
    36541 aatcctaaag ccaaagtgat tttcgacgtc aaatccaccc gtctgcttgc gccttggatt
    36601 aaagaacacg gcggcgaacc tgtgatggaa aaaaccggcc acagctttat caaatccgcc
    36661 atgaaaaaaa ccggcgcgcc ggttgccggc gaaatgagcg gacacatctt cttcaaagaa
    36721 cgctggttcg gcttcgacga cggtctgtac gccggcgcac gcctcttgga aatcctgtct
    36781 gcctccgata atccgtccga agtgttaaac aacctgccgc aaagcatttc cacgcccgaa
    36841 ctcaacatcg ccctgcccga aggcagcaac ggccatcagg ttatcgacga actcgccgcc
    36901 aaagccgaat ttgaaggcgc aaccgaaatc atcaccatcg acggtctgcg cgttgaattt
    36961 cccgacggct tcggtctgat gcgtgcttcc aataccacgc cgattctggt gttgcgtttt
    37021 gaggcggata cgcaagaagc catcgagcgg attcaaaacc aattcaaagc cgtcatcgaa
    37081 agcaatccga atctaatctg gcctctgtaa acacaggaaa aatgcttaat caaatcttgg
    37141 tagattggat ttggcttaaa aatctccgcg tccgttcgtg tttggggtgg tcgaacaact
    37201 ctttcgggct gccctgctct acgataacgc cgccgtccat cacgacaacg gtcgtggcaa
    37261 cttccagcgc gaacttgatt tcgtgggtaa cgacgaccat cgtccaacct tcccgcgcca
    37321 attccttcat ggcgttcaac acgtcttgca ccaactcggg gtcaagcgcg gaagtgggtt
    37381 cgtcaaacaa catcagctcg ggctgaatcg ccaatgctcg ggcaatgccg acgcgctgct
    37441 gctgaccgcc ggaaagctgg tagggataca aatccacttt gtcgcccaag ccgacttttt
    37501 ccagcagttt cagagcctct tcgcgcgctt gggcggcagg cttgccctgt acggcaaccg
    37561 gtccttccat cacgttttcc aaggcggttt tgtgcggaaa gaggttgtat tgttgaaaca
    37621 ccatgcctga tttgcggcgc agtgccaaaa tatcgtgttt gcttggtttt ttagaaaaat
    37681 cgattttcag cggtcgctcg ttgtcgaact cgatttgtcc gtcttcgggc atttccaacg
    37741 cgtttaggca gcgcagaaac gtcgttttgc ctgagccgga aggcccgagg atgacgacca
    37801 cctgcccttt gcacacatcc aaatcgatgc cgcgcaaaat ggtattttcg ccgaaggtct
    37861 tatggatatt gcggatttta atcatgacaa ctcctcattt ggcgacatag cggtcgaaac
    37921 gtttttccaa acgcgcctga atcagaaaca gcactttgca gaaacaccag taaaccaaag
    37981 cggcttcgat atagacgggc aaaaagtcat aagtgcggtt tgccgtctct tgggcgacac
    38041 gaaaaagctc tgttaccgtt accaccgccg cgagcgaggt gtttttgaac aagccgataa
    38101 attcgttgct caaaggcggc acggcaacgc gaaatgcctg cggcgcgacg atgcggcgga
    38161 acgtctgcat ataggtcatg ccgatggaga aacctgcttc ccattggcct ttcggtacgg
    38221 acaaaattgc cgcgcgtatg gtttcggaag catatgcgcc gacattgagc gaaaagccga
    38281 tgatggcggc aggaatcggg tcgatataga tgccgacgga aggcagcccg taaaacacaa
    38341 tcacaagctg aaccaacagc ggcgtaccgc gaatgacgga aatataaaat tccaccaatt
    38401 tcagcaggat tttccgcacg atgccgccgg cgggcataat ccgcaccaaa gccacggcta
    38461 ccgcaatcat cataccgata acgaaagaag ctgccgccaa aggcagagag accgcgaagc
    38521 cggctttgac cataggcaaa aacgcgctga caatcatatc ggcgcgtgtt tccgtcataa
    38581 acggcagcga agcaaggaaa ttattgaaca ctgatgtctt ttccgaagaa ttgttcgccc
    38641 agttttttca gcgtaccgtc ggctttcagc tcgttgattg ccgtactgaa tttcgccacg
    38701 gcttcgtcat tgcccttgtt gacaatcagg ccggaaccga ctttttcatc ggcaggtgcg
    38761 gaccaaacga ttttcacgcc cgcattcggg tttttcttca gatagtccaa aaccgccaat
    38821 tcgtcgttca gggttgcatc ggcacgtttt tgttcaatca gggtcagcga ttgcgccaaa
    38881 ccgtcaacag ccaccaaatc tgcgcctgca gctttggctt tttcgccgta gttgctggtc
    38941 agggattgtg cggttttcac gcctttgatg tcgtcgatag atttgatgtt gctgtcgtta
    39001 cgggcaacca atacggcacc gctccagctg taaggatcgg atttgtcgaa tgtcgcttgg
    39061 cgttcggggc tggtcagacc gacttggttt gccaccacgt cgaaacgccc cgccttcaaa
    39121 cccgccatca tcgaatccca ttgcgtttct ttaaactcga ctttcacgcc cagtttttcc
    39181 gccacggcgc gggttacttc cacatcgtaa ccggtcagtt tgccgtcctt gtcgtggtag
    39241 gtaaacggtg cgtaagtgcc ttccgtgccg acggtaaccg tgcctttatt gttgatgcgc
    39301 tcgattaaag aaccggaaac tgccgattgt gcaggcgcgg aagatgctcc gctgccgcct
    39361 tccgaaccgc cgcaggccgc caaaaccaat gcggcaatac cgccgagtac gaattttttc
    39421 aacatcattc tctcctgtaa aaagtgtgca agtgcggcat tctaagtgaa attgcggcaa
    39481 acacaaagaa tccttttttt atatggttat tccaaatcgg aatggaaaag atatgccgaa
    39541 gccgccggaa gcggaaataa agggggcggg aaaggcggcg ggcggcacga aaccgaaaag
    39601 cggcatcagg tatgcaaacg gcggattcac gcacgccgtt ccggtaaaaa tccgcctgcc
    39661 gattcggtgc tataatccat ccgaaacaga tgacaccaaa aaggaacatc tcatgaacac
    39721 gccccaatcc gccatcattc ccgaccacgc ccaagccggc atctttatcg aagccgactt
    39781 cgccgccaac cgcctcaacg atattaaagc cgcctgccgc gcttcgctcg acgcgttaac
    39841 tgccttgaaa gcccgctttc cggacgatat tttgggtctg accatcgcct tcggcagcaa
    39901 agcctgggca acattcggac atacggacga aggcagtgaa atcaaaccct tctccgaaat
    39961 gggcaacggg cttgcgccgt ccacgcagca cgatatgtcc atccacatcc aatccttccg
    40021 ccaaaacgcc gcctacgcgc ttgcccaatc cgttttgggc gcgttcggcg acagcatatg
    40081 cgtcgcgtcc gaagaacacg gtttgcgcct gtatcaggat cgcgggctgg acggtttcgt
    40141 cgacggcacg gaaaacccgc agggcgatga aaatgtccgc gaagtcgcca tcatccccga
    40201 aggaaaaccc gatgcgggcg gcagctatgt cctgctgcaa aaatacctgc acgatttgaa
    40261 aaaatgggat gccgtccccg tcgccgaaca ggaggcctcg gtcggacgcg gcaaggaaac
    40321 cgacgacgaa ttcggccgcg atgtccgcct gcccgattcg cacctcggcc gcgtcaacct
    40381 gaaagaaaac ggagtcggcc tgaaaatcgt ccgccgcagc ctgcccttcg gcaaaatcag
    40441 cggcgaacac ggtttgatgt ttaccgcata ctgccgcacg ctgcacaata tcgaagcgca
    40501 attattgagt atgttcggcg atacggacgg caaaaccgac ctgctgctcc gacatctctc
    40561 cgccgccgtt tcgggcggat actactacgc gccgtctgtc gaacgcctgc aaaacctcta
    40621 agccggacga tgccgtctga aaccattttt cagacggcat ttt
//
LOCUS       DAWGBY010000006        36449 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.006, whole genome shotgun sequence.
ACCESSION   DAWGBY010000006 DAWGBY010000000
VERSION     DAWGBY010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36449
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.006"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            114..189
                     /locus_tag="WHG62_000283"
     tRNA            114..189
                     /locus_tag="WHG62_000283"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:147..149,aa:Thr,seq:cgt)
     gene            265..1392
                     /locus_tag="WHG62_000284"
     CDS             265..1392
                     /locus_tag="WHG62_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ1724455.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEENMAKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            1572..2129
                     /gene="frr"
                     /locus_tag="WHG62_000285"
     CDS             1572..2129
                     /gene="frr"
                     /locus_tag="WHG62_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ1724456.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAVKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            2185..2931
                     /locus_tag="WHG62_000286"
     CDS             2185..2931
                     /locus_tag="WHG62_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ1724457.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFSRQILKGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAKGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            2934..3731
                     /locus_tag="WHG62_000287"
     CDS             2934..3731
                     /locus_tag="WHG62_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ1724458.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLSGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            3736..4971
                     /locus_tag="WHG62_000288"
     CDS             3736..4971
                     /locus_tag="WHG62_000288"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ1724459.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPD
                     QAVKHPNWRMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            5006..6346
                     /gene="rseP"
                     /locus_tag="WHG62_000289"
     CDS             5006..6346
                     /gene="rseP"
                     /locus_tag="WHG62_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ1724460.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPITSWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            6403..8796
                     /gene="bamA"
                     /locus_tag="WHG62_000290"
     CDS             6403..8796
                     /gene="bamA"
                     /locus_tag="WHG62_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ1724461.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKQYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEIGYANGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            8862..9362
                     /locus_tag="WHG62_000291"
     CDS             8862..9362
                     /locus_tag="WHG62_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ1724462.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKVQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            9395..10438
                     /gene="lpxD"
                     /locus_tag="WHG62_000292"
     CDS             9395..10438
                     /gene="lpxD"
                     /locus_tag="WHG62_000292"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ1724463.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKAHGGI
                     HPTAVVEPSATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVMHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVHIHRLSEMNKRLK
                     TLEQQLSDGKDTQ"
     gene            10474..10923
                     /gene="fabZ"
                     /locus_tag="WHG62_000293"
     CDS             10474..10923
                     /gene="fabZ"
                     /locus_tag="WHG62_000293"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ1724464.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFESMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            11010..11786
                     /gene="lpxA"
                     /locus_tag="WHG62_000294"
     CDS             11010..11786
                     /gene="lpxA"
                     /locus_tag="WHG62_000294"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ1724465.1"
                     /translation="MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCH
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFTQSTRGIIR"
     gene            12144..13535
                     /locus_tag="WHG62_000295"
     CDS             12144..13535
                     /locus_tag="WHG62_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ1724466.1"
                     /translation="MQVFLDNPKAFFETVSGWVWGPLMLMLLVGTGILLTVLLKGLQF
                     TMLGYALKQAFMPPKKHKSGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            13614..14870
                     /locus_tag="WHG62_000296"
     CDS             13614..14870
                     /locus_tag="WHG62_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ1724467.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTSKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLHIKAVETETGRFEADAVVCALGCFSRTVLAQLDLELPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            15051..15860
                     /gene="zupT"
                     /locus_tag="WHG62_000297"
     CDS             15051..15860
                     /gene="zupT"
                     /locus_tag="WHG62_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ1724468.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            15957..18794
                     /locus_tag="WHG62_000298"
     CDS             15957..18794
                     /locus_tag="WHG62_000298"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ1724469.1"
                     /translation="MLDKYNPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHTFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLF
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAINPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLINVFDLEAKVLANAEVFNFKGEAQPGFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGTVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEVALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESEDAPIAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNTKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            18936..19127
                     /locus_tag="WHG62_000299"
     CDS             18936..19127
                     /locus_tag="WHG62_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724470.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            complement(19124..20044)
                     /gene="oxyR"
                     /locus_tag="WHG62_000300"
     CDS             complement(19124..20044)
                     /gene="oxyR"
                     /locus_tag="WHG62_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ1724471.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(20048..20311)
                     /gene="minE"
                     /locus_tag="WHG62_000301"
     CDS             complement(20048..20311)
                     /gene="minE"
                     /locus_tag="WHG62_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ1724472.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            complement(20315..21130)
                     /gene="minD"
                     /locus_tag="WHG62_000302"
     CDS             complement(20315..21130)
                     /gene="minD"
                     /locus_tag="WHG62_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ1724473.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            complement(21158..21871)
                     /gene="minC"
                     /locus_tag="WHG62_000303"
     CDS             complement(21158..21871)
                     /gene="minC"
                     /locus_tag="WHG62_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ1724474.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPNHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            complement(22018..22386)
                     /gene="rplQ"
                     /locus_tag="WHG62_000304"
     CDS             complement(22018..22386)
                     /gene="rplQ"
                     /locus_tag="WHG62_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ1724475.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            complement(22410..23396)
                     /gene="rpoA"
                     /locus_tag="WHG62_000305"
     CDS             complement(22410..23396)
                     /gene="rpoA"
                     /locus_tag="WHG62_000305"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ1724476.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            complement(23422..24042)
                     /gene="rpsD"
                     /locus_tag="WHG62_000306"
     CDS             complement(23422..24042)
                     /gene="rpsD"
                     /locus_tag="WHG62_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ1724477.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            complement(24062..24457)
                     /gene="rpsK"
                     /locus_tag="WHG62_000307"
     CDS             complement(24062..24457)
                     /gene="rpsK"
                     /locus_tag="WHG62_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ1724478.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            complement(24477..24839)
                     /gene="rpsM"
                     /locus_tag="WHG62_000308"
     CDS             complement(24477..24839)
                     /gene="rpsM"
                     /locus_tag="WHG62_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ1724479.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            complement(24905..25018)
                     /gene="rpmJ"
                     /locus_tag="WHG62_000309"
     CDS             complement(24905..25018)
                     /gene="rpmJ"
                     /locus_tag="WHG62_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ1724480.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            complement(25039..25257)
                     /gene="infA"
                     /locus_tag="WHG62_000310"
     CDS             complement(25039..25257)
                     /gene="infA"
                     /locus_tag="WHG62_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ1724481.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            complement(25262..26572)
                     /gene="secY"
                     /locus_tag="WHG62_000311"
     CDS             complement(25262..26572)
                     /gene="secY"
                     /locus_tag="WHG62_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ1724482.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            complement(26584..27018)
                     /gene="rplO"
                     /locus_tag="WHG62_000312"
     CDS             complement(26584..27018)
                     /gene="rplO"
                     /locus_tag="WHG62_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ1724483.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            complement(27020..27205)
                     /gene="rpmD"
                     /locus_tag="WHG62_000313"
     CDS             complement(27020..27205)
                     /gene="rpmD"
                     /locus_tag="WHG62_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ1724484.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            complement(27198..27716)
                     /gene="rpsE"
                     /locus_tag="WHG62_000314"
     CDS             complement(27198..27716)
                     /gene="rpsE"
                     /locus_tag="WHG62_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ1724485.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            complement(27735..28088)
                     /gene="rplR"
                     /locus_tag="WHG62_000315"
     CDS             complement(27735..28088)
                     /gene="rplR"
                     /locus_tag="WHG62_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ1724486.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            complement(28102..28635)
                     /gene="rplF"
                     /locus_tag="WHG62_000316"
     CDS             complement(28102..28635)
                     /gene="rplF"
                     /locus_tag="WHG62_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ1724487.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            complement(28649..29041)
                     /gene="rpsH"
                     /locus_tag="WHG62_000317"
     CDS             complement(28649..29041)
                     /gene="rpsH"
                     /locus_tag="WHG62_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ1724488.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            complement(29057..29362)
                     /gene="rpsN"
                     /locus_tag="WHG62_000318"
     CDS             complement(29057..29362)
                     /gene="rpsN"
                     /locus_tag="WHG62_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ1724489.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            complement(29365..29904)
                     /gene="rplE"
                     /locus_tag="WHG62_000319"
     CDS             complement(29365..29904)
                     /gene="rplE"
                     /locus_tag="WHG62_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ1724490.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            complement(29914..30237)
                     /gene="rplX"
                     /locus_tag="WHG62_000320"
     CDS             complement(29914..30237)
                     /gene="rplX"
                     /locus_tag="WHG62_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ1724491.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            complement(30249..30617)
                     /gene="rplN"
                     /locus_tag="WHG62_000321"
     CDS             complement(30249..30617)
                     /gene="rplN"
                     /locus_tag="WHG62_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ1724492.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            complement(30839..31102)
                     /gene="rpsQ"
                     /locus_tag="WHG62_000322"
     CDS             complement(30839..31102)
                     /gene="rpsQ"
                     /locus_tag="WHG62_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ1724493.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            complement(31102..31293)
                     /gene="rpmC"
                     /locus_tag="WHG62_000323"
     CDS             complement(31102..31293)
                     /gene="rpmC"
                     /locus_tag="WHG62_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ1724494.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            complement(31293..31709)
                     /gene="rplP"
                     /locus_tag="WHG62_000324"
     CDS             complement(31293..31709)
                     /gene="rplP"
                     /locus_tag="WHG62_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ1724495.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            complement(31693..32385)
                     /gene="rpsC"
                     /locus_tag="WHG62_000325"
     CDS             complement(31693..32385)
                     /gene="rpsC"
                     /locus_tag="WHG62_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ1724496.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            complement(32395..32724)
                     /gene="rplV"
                     /locus_tag="WHG62_000326"
     CDS             complement(32395..32724)
                     /gene="rplV"
                     /locus_tag="WHG62_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ1724497.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            complement(32733..33011)
                     /gene="rpsS"
                     /locus_tag="WHG62_000327"
     CDS             complement(32733..33011)
                     /gene="rpsS"
                     /locus_tag="WHG62_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ1724498.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            complement(33018..33851)
                     /gene="rplB"
                     /locus_tag="WHG62_000328"
     CDS             complement(33018..33851)
                     /gene="rplB"
                     /locus_tag="WHG62_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ1724499.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     SNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            complement(33857..34171)
                     /gene="rplW"
                     /locus_tag="WHG62_000329"
     CDS             complement(33857..34171)
                     /gene="rplW"
                     /locus_tag="WHG62_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ1724500.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            complement(34168..34788)
                     /gene="rplD"
                     /locus_tag="WHG62_000330"
     CDS             complement(34168..34788)
                     /gene="rplD"
                     /locus_tag="WHG62_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ1724501.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            complement(34788..35432)
                     /gene="rplC"
                     /locus_tag="WHG62_000331"
     CDS             complement(34788..35432)
                     /gene="rplC"
                     /locus_tag="WHG62_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ1724502.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            complement(35676..36001)
                     /locus_tag="WHG62_000332"
                     /pseudo
     CDS             complement(35676..36001)
                     /locus_tag="WHG62_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(36122..36433)
                     /gene="rpsJ"
                     /locus_tag="WHG62_000333"
     CDS             complement(36122..36433)
                     /gene="rpsJ"
                     /locus_tag="WHG62_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEZ1724503.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
BASE COUNT         9632 a         9937 c         8263 g         8617 t
ORIGIN      
        1 aaggcgaggc aacgacgtac tggtttttgt taatccacta taccgcgcac tgccttgccg
       61 cccgcccgaa aagttgcaca aacaaccgtt catatatatc atgacgaaaa aacgccggtg
      121 tagctcagtc ggtagagcag cgcattcgta acgcgaaggt cgggggttcg attcccttct
      181 ccggcaccaa taccaagcac agaccctccc ttcctcggga agcctgtgct ttttcacatt
      241 tccgcttcag acggcacaac cgatatgaac acctcgcaac gcaaccgcct cgtcagccgc
      301 tggctcaact cctacgaacg ctaccgctac cgccgcctca tccacgccgt ccggctcggc
      361 ggggccgtcc tgttcgccac cgcctccgcc cggctgctcc acctccaaca cggcgagtgg
      421 atagggatga ccgtcttcgt cgtcctcggc atgctccagt ttcaaggggc gatttactcc
      481 aaggcggtgg aacgtatgct cggcacggtc atcgggctgg gcgcgggttt gggcgtttta
      541 tggctgaacc agcattattt ccacggcaac ctcctcttct acctcaccgt cggcacggca
      601 agcgcactgg ccggctgggc ggcggtcggc aaaaacggct acgtccctat gctggcgggg
      661 ctgacgatgt gcatgctcat cggcgacaac ggcagcgaat ggttcgacag cggcctgatg
      721 cgcgcgatga acgtcctcat cggcgcggcc atcgccatcg ccgccgccaa actgctgccg
      781 ctgaaatcca cactgatgtg gcgtttcatg cttgccgaca acctgaccga ctgcagcaaa
      841 atgattgccg aaatcagcaa cggcaggcgc atgacccgcg aacgcctcga agagaacatg
      901 gcgaaaatgc gccaaatcaa cgcacgcatg gtcaaaagcc gcagccacct cgccgccaca
      961 tcgggcgaaa gccgcatcag ccccgccatg atggaagcca tgcagcacgc ccaccgtaaa
     1021 attgtcaaca ccaccgagct gctcctgacc actgccgcca agctgcaatc tcccaaactc
     1081 aacggcagcg aaatccggct gctcgaccgc cacttcacac tgctccaaac cgacctgcaa
     1141 caaaccgtcg cccttatcaa cggcagacac gcccgccgca tccgcatcga caccgctatc
     1201 aaccccgaac tggaagccct cgccgaacac ctccactacc aatggcaggg cttcctctgg
     1261 ctcagcacca atatgcgtca ggaaatttcc gccctcgtca tcctgctgca acgcacccgc
     1321 cgcaaatggc tggatgccca cgaacgccaa cacctgcgcc aaagcctgct tgaaacacgg
     1381 gaacacggct gacggtcgga cacgatgccg tctgaaacgc ctgtcgcttc agacggcatc
     1441 cccaatccgc ctaccttgtc gttatgcccg aataacggta ctattcgcgg ttaacggtct
     1501 ttatgccgtc tgaacggctt gaaacgcgtt cagacggtct cccgcccacc ttatcccacc
     1561 gaaagaacaa tatgatcaac gatattcaaa aaacagccga aggcaaaatg cagcgttcgg
     1621 tcgaagtact gaaagaaaat ctggcgaaag tgcgtaccgg ccgcgcgcat accggcctgc
     1681 tcgaccaagt ggaagtcgaa tactggggca gcatggtccc cgtcagccaa gttgccaacg
     1741 taacgcttct ggacgcgcgc accatcggcg tgaaaccgtt tgagggcaat atggcggtca
     1801 aagtcgagaa agccatccgc gattcaaact tggggctgaa cccggcagct gtcggcgacc
     1861 tgatccgcgt gccgatgccc atgctgaccg aagaacgccg caaagacctg attaaagtcg
     1921 tacgcggcga agcggaagaa ggccgcgtct ccatccgcaa cgtgcgccgc gatgccaacg
     1981 accacatcaa aaaactcctc aaagacaaag aaatttccga agacgaggca cgtcgcggcg
     2041 aagaagcggt tcaaaaactg accgacaaat acattaccga agccgacaaa ctcctgactg
     2101 ccaaagaaga agatttgatg gcaatttaac ctgcacggtt cggcgttcag acggcatttg
     2161 aatgccgaac cgcgaaaggc agacatgaaa agcagcacgc aggccgtttt ggaacacacc
     2221 gccattccca agcatatcgc cgtgattatg gacggcaacg gccgttgggc gaaaaaacgt
     2281 ttcctcccgc gcataatggg acacaaacgc ggtttggacg cattggaaaa tatggtgaag
     2341 cattgcgcca aactgggtgt gcaatatctg accgtgtttg ccttttcaac cgaaaactgg
     2401 cgccgccccg aagacgaagt ttcgttcctg atggggctgt ttttacaggc tttgcaaaaa
     2461 caggtacgcc gcctgcacga aaacaatatg cgcctgaaaa tactgggcag ccgcgaacgc
     2521 ttcagccgtc aaatcctgaa gggcatcgaa gaggcggagg cgttgacggc aaacaatacc
     2581 ggtctgaccc tgagcattgc cgccgattac ggcggcagat gggacatttt gcaggcggca
     2641 aacaaactga ttgccaaagg cgtatccgag attacggaag acacgctggc gaaacacttg
     2701 atgctgggcg atgcgcccga gccggatttg ttcatccgca ccggcggcga aacgcgcatc
     2761 agcaatttcc tactctggca aatggcttat gccgaactgt atttcaccga tattttgtgg
     2821 cccgattttg acggcaaggc tttggacgat gccgtcgctt cgttccaaaa acgcgaacgg
     2881 cggttcggac gcacctccga gcaactgcct atcgaacagc aaaggaactg aatatgctga
     2941 aacaacgggt aataaccgcc atgtggctgc tgccgctgat gctgggcatg ctgttttacg
     3001 cgccgcaatg gttgtgggct gcattttgcg gactgattgc cctgattgcc ttgtgggaat
     3061 atgcccgtat gggcggtttg tgcaaaatta aaaccaacca ttacctcgcc gcaaccttgg
     3121 ttttcggcgt ggttgcctat gcgggcggct ggatgctgcc taatttggtt tggtatgttg
     3181 ttttggcatt ttggctcgcc gttatgcctt tatggttgag attcaaatgg aggctcaacg
     3241 gcggttggca ggtttatgcc gtcggctggc ttctggtcat gccgttttgg ttcgcgctcg
     3301 tatccctgcg cccgcatccc gatgatgccc tgccgctgct cgccgtgatg ggtttggtgt
     3361 gggttgccga tatttgcgcg tatttcagcg gcaaggcgtt cggcaaacac aaaatcgcac
     3421 cggcaatcag ccccggcaaa agctgggaag gtgcaatcgg cggcgcggtt tgcgtggcag
     3481 tgtacatgac cgccgtacga agtgccggct ggctggcatt cgatacaggc tggttcgata
     3541 ccgtgttaat cggtttggtg ctgaccgttg tcagcgtatg cggcgacctg ttggaaagct
     3601 ggctcaagcg cgcggcgggc attaaagaca gcagcaacct gctgtccgga cacggcggcg
     3661 tgttcgaccg taccgacagc ctgattgccg ttatcagcgt ctatgcggcg atgatgtcgg
     3721 ttttaaattg attctatgcc gtctgaaaac gcttcagacg gcatccggta taaagttatc
     3781 ctcattatga caccacaagt cctgaccata ttaggcagta ccggcagcat aggcgaaagc
     3841 acgctggacg ttgtctcccg ccaccccgaa aaattccgcg tattcgcgct ggcagggcat
     3901 aagcaggtcg agaaattggc ggctcaatgt caaacgttcc gccccgaata tgccgtcgtt
     3961 gccgatgcgg aacacgccgc ccggcttgaa gccctgttga aacgcgacgg cacggcgacg
     4021 caggttttac acggcgcgca ggcattggtt gacgttgcgt ctgccgacga agtcagcggt
     4081 gtcatgtgcg ccatcgtcgg ggcagtgggg ctgccttccg cgctcgcagc ggcgcaaaaa
     4141 ggcaaaacca tttatctggc gaacaaagag acgctggtgg tttccggcgc gttgtttatg
     4201 gaaaccgccc gtgcaaacgg cgcggcagtg ctgcccgtcg acagcgaaca caacgccgtt
     4261 ttccaagttt tgccgcgcga ttacgccggc cgtctgaacg aacacggcat cgcttcgatt
     4321 atcctgaccg cttccggcgg cccgtttctg accgccgatt taaacacgtt cgacagcatt
     4381 acgcccgacc aagcggtcaa acaccccaat tggcgtatgg gacgcaaaat ctccgtcgat
     4441 tccgccacca tgatgaacaa aggtttggag ctgattgaag cgcattggct gttcaactgt
     4501 ccgcccgaca aactcgaagt cgtcatccat ccgcaatccg tgatacacag catggtgcgc
     4561 taccgcgacg gctccgtgct ggcgcaactg ggcaatcccg atatgcgaac gcccattgct
     4621 tattgtttgg gcttgccgga acgcatcgat tcgggtgtcg gcgacctgga tttcgacgca
     4681 ttgtccgcgc tgaccttcca aaagcccgac tttgaccgct tcccctgcct gaagctcgcc
     4741 tatgaagcca tgaacgcagg cggagccgcg ccctgcgtat tgaacgccgc caacgaagcc
     4801 gccgtcgccg cctttttgga cggacagatt aagtttaccg acattgccaa aaccgtcgcc
     4861 cattgtcttt cacaagactt ttcagacggc ataggcgaca taggggggct cttggcgcaa
     4921 gatgcccgga cacgcgcaca agcgcgggca tttatcggca cactgcgctg atgccgtctg
     4981 aacaccgtta tcaaaggaaa accatttgca cacccttcta gcttttatct tcgccatcct
     5041 gattttggtc agcctgcacg agttcggaca ctacatcgtt gccagattgt gcggcgtcaa
     5101 agtcgtacgc ttttccgtcg gcttcggcaa accgtttttc acccgaaagc gcggcgacac
     5161 cgaatggtgc ctcgccccga ttccgttggg cggttacgtc aaaatggtcg atacgcgcga
     5221 aggcgaagta tcagaagccg atttacccta cgcttttgac aaacaacacc ccgccaaacg
     5281 catcgccatc gtcgccgccg gcccgctgac caatctcgca ctggcggttt tgctgtacgg
     5341 actgagcttt tccttcggcg taaccgaact gcgcccctat gtcggcacag tcgaacccga
     5401 caccattgcc gcccgcgccg gcttccaaag cggcgacaaa atacaatccg tcaacggcac
     5461 acccgttgca gattggggca gcgcgcaaac cgaaatcgtc ctcaacctcg aagccggcaa
     5521 agtcgccgtc ggcgttcaga cggcatcagg cgcgcaaacc gtccgcacca tcgatgccgc
     5581 aggcacgccg gaagccggta aaatcgcaaa aaaccaaggc tacatcggac tgatgccctt
     5641 taaaatcaca accgttgccg gtggcgtgga aaaaggcagc cccgccgaaa aagcaggcct
     5701 gaaaccgggc gacaggctga ctgccgccga cggcaaaccc attacctcat ggcaagaatg
     5761 ggcaaacctg acccgccaaa gccccggcaa aaaaatcacc ctgaactacg aacgcgccgg
     5821 acaaacccat accgccgaca tccgccccga tactgtcgaa cagcccgacc acaccctgat
     5881 cgggcgcgtc ggcctccgtc cgcagccgga cagggcgtgg gacgcgcaaa tccgccgcag
     5941 ctaccgtccg tctgttatcc gcgcattcgg catgggctgg gaaaaaaccg tttcccactc
     6001 gtggacaacc ctcaaatttt tcggcaaact aatcagcggc aacgcctccg tcagccatat
     6061 ttccgggccg ctgaccattg ccgacattgc cggacagtcc gccgaactcg gcttgcaaag
     6121 ttatttggaa tttttggcac tggtcagcat cagcctcggc gtgctgaacc tgctgcccgt
     6181 ccccgttttg gacggcggcc acctcgtgtt ttatactgcc gaatggatac gcggcaaacc
     6241 tttgggcgaa cgcgtccaaa acatcggttt gcgcttcggg cttgccctca tgatgctgat
     6301 gatggcggtc gccttcttca acgacgttac ccggctgctc ggttagattt tacgtttcgg
     6361 aatgccgtct gaaaccgcat tccgcaccac aaggaactga caatgaaact gaaacagatt
     6421 gcttccgcac tgatggtctt gggcatatcg cctttggcac ttgccgactt caccatccaa
     6481 gacatccgcg tcgaaggctt gcagcgtacc gagccgagca ccgtattcaa ctacctgccc
     6541 gtcaaagtcg gcgacaccta caacgacaca cacggcagtg ccatcatcaa aagcctgtac
     6601 gccaccggtt tctttgacga cgtacgcgtc gaaactgcgg acgggcagct cctgctgacc
     6661 gttatcgaac gccccaccat cggctcgctc aacatcaccg gcgcaaaaat gctgcaaaac
     6721 gacgccatta agaaaaacct cgaatcgttc gggctggcgc agtcgcaata ctttaatcag
     6781 gcgacactca atcaggcagt cgccggcctg aaagaagaat acctcgggcg cggcaaactc
     6841 aatatccaaa tcacgcccaa agtaaccaaa ctcgcccgca accgcgtcga catcgacatc
     6901 acgattgacg agggcaaatc cgccaaaatc accgacatcg aatttgaagg caaccaagtc
     6961 tattccgacc gcaaactgat gcggcagatg tcgctgaccg aaggcggcat ttggacatgg
     7021 ctgacacgaa gcaaccaatt caacgagcag aaatttgccc aagacatgga aaaagtaacc
     7081 gacttctacc agaacaacgg ctacttcgat ttccgcatcc tcgataccga catccaaacc
     7141 aacgaagaca aaaccaagca gaccatcaaa atcaccgtcc acgaaggcgg acgtttccgt
     7201 tggggcaaag tctccatcga aggcgacacc aacgaagtcc ccaaagccga actggaaaaa
     7261 ctgctgacca tgaagcccgg caaatggtac gaacgccagc agatgaccgc cgttttgggt
     7321 gagattcaga accgcatggg ctcggcaggc tacgcataca gcgaaatcag cgtacagccg
     7381 ctgccaaacg ccgaaaccaa aaccgtcgat ttcgtcctgc acatcgaacc gggccggaaa
     7441 atctacgtca acgaaatcca catcaccggc aacaacaaaa cccgcgacga agtcgtgcgc
     7501 cgcgaattgc gccaaatgga atccgcgcct tacgacacct ccaagctgca acgctccaaa
     7561 gagcgcgtcg agcttttggg ctacttcgac aacgtacagt ttgatgccgt cccgcttgcc
     7621 ggcacacccg acaaagtcga tttgaacatg agcctgaccg aacgttccac cggctcgctc
     7681 gacttgagcg cgggctgggt acaggatacc ggcctggtca tgtccgcagg cgtttcccaa
     7741 gacaacctgt tcggtacggg caagtcggcc gccctgcgcg cctcacgaag caaaaccacg
     7801 ctcaacggct cgctgtcgtt taccgacccg tacttcacgg cagacggggt cagcctaggc
     7861 tacgatgttt acggaaaagc cttcgacccg cgcaaagcat cgaccagcat caaacaatat
     7921 aaaaccacca cggcaggcgc aggcatccgc atgagcgtgc ctgttaccga atacgaccgc
     7981 gtgaatttcg gtttggtggc agaacacctg accgtcaaca cctacaacaa agcgcccaaa
     8041 cactatgccg actttatcaa acaatacggc aaaaccgacg gcacagacgg cagcttcaaa
     8101 ggctggctgt acaaaggtac cgtcggctgg gggcgcaaca aaaccgacag cgcgttatgg
     8161 ccgacgcgcg gctacctgac gggcgtgaac gccgaaatcg ccctgcccgg cagcaaactg
     8221 caatactact ccgccaccca caaccaaacc tggttcttcc ccctgagcaa aaccttcaca
     8281 ctgatgcttg gcggcgaaat cggctatgcc aacggctacg gcaaaaccaa agaaatcccc
     8341 ttctttgaaa acttctacgg cggcggcctg ggttcggtac gaggttacga aagcggcaca
     8401 cttggtccga aagtctatga cgaatacggc gaaaaaatca gctacggcgg caacaaaaaa
     8461 gccaacgtct ccgccgagct gctcttcccg atgcccggcg cgaaagacgc gcgcaccgtc
     8521 cgcctgagcc tgtttgccga cgcaggcagc gtgtgggacg gcaaaaccta cgacgacaac
     8581 agcagttccg cgaccggcgg cagggttcaa aacatttacg gcgccggcaa tacccataaa
     8641 tccaccttta ccaacgaatt gcgctattcc gccggcggcg cggttacctg gctctcgcct
     8701 ttaggcccga tgaaattcag ctacgcctac ccgctgaaga aaaaaccgga agacgaaatc
     8761 caacgcttcc aattccaact cggcacgacg ttctaatccc gcaaatgccg tctgaagccc
     8821 ttcagacggc atttcgcggc aacattcgaa ggagttttac catgacccgt ttgacccgcg
     8881 cgtttgccgc ggctctgatc ggtttgtgct gcaccgcagg cgcgcacgcc gacaccttcc
     8941 aaaaaatcgg ctttatcaac accgagcgca tctacctcga atccaagcag gcgcgcaaga
     9001 ttcaaaaaac gctggacagc gaattttccg ctcgtcagga cgaattgcaa aaactgcaac
     9061 gcgaaggtct ggatttggaa aggcagcttg ccgaaggcaa actcagaaac gcaaaaaagg
     9121 tgcaagccga agaaaaatgg cgcgggctgg tcgcagcgtt ccgcaaaaaa caggcgcagt
     9181 ttgaagaaga ctacaacctc cgccgcaacg aagagtttgc ctccctccag caaaacgcca
     9241 accgcgtcat cgtcaaaatc gccaaacagg aaggttacga tgtcattttg cagaacgtga
     9301 tttacgtcaa cacccaatac gacgttaccg acagcgtcat taaagaaatg aacgcccgct
     9361 gaccctttca gacggcatac cgaacaggaa aaccatgatt ccggccacct acaccctgtc
     9421 ccaaatcacc gcgcggctcg gcggcgaatg gcgcggcgag gacatttccg ttaccgccgt
     9481 gcgcccgctc gcagacgcgc aggcggaaca catcagcttc cttgccaatc cgaaatacaa
     9541 agccgaagtc cacgacagca gcgcgggcgc ggtcatcgtt tccgccaaag cggcagacgg
     9601 atttgaaggg cgcaacctga ttgtcgccga cgacccctat ctctatttcg ccaaagtcgc
     9661 ccgcctgttt tcacccgtcg tcaaagcgca cggcggcatc catccgaccg ccgtcgtcga
     9721 accgagtgcc accgttcccg caagctgcga aatcggcgcg aacgcctaca tcggcgcaaa
     9781 caccgtgctc ggcgaaggct gccgcatctt ggcaaacgcc gtcgtccaac acgattgcaa
     9841 actgggcgac gaagtcgtca tgcaccccaa cgccgtcgtt tattacggct gtacactggg
     9901 cagacgcgtc gaaatccaca gcggcgcagt catcggcgcg gacggtttcg gactcgcctt
     9961 cgccggcgat tcgtggttta aaatcccgca aaccggcgcg gtaacgctgg gcgacgacgt
    10021 ggaaatcggc tcgaacacca acatcgaccg gggcgcgatg agcgacacca ccgtcggcaa
    10081 cggcaccaaa atcgacaacc aagtccaaat cggacacaac tgcaaaatcg gttcgcacac
    10141 cgtcatcgcc gccaaaaccg gcatctcagg cagcgtaacc ataggcagct actgcatcat
    10201 cggcggcggt gtcggcacgg tcggacacat cgaaatcgcc gacaaaacca ccatcggcgg
    10261 cggcacgtcc gtcacccaca gcattaccga aagcggcaaa cacctcgccg gcatcttccc
    10321 gatgtccacc cataaagaat gggcgcgcaa cgccgtccat atccaccgct taagcgaaat
    10381 gaacaaacgc ctcaaaacgc tggaacagca gctttcagac ggcaaagaca cgcaataaat
    10441 ccaaaccgat tttattcaag gaatacgaca gacatggacg tacaactccc catcgaagcc
    10501 aaagacatcc aaaaactcat cccccaccgc tatccgtttc tccagctcga ccgcatcacc
    10561 gccttcgagt ccatgaaaac cctgaccgcc atcaaaaacg tcaccataaa cgaaccccag
    10621 ttccaaggcc atttccccga cctgcccgtg atgcccggcg tactcatcat cgaagcgatg
    10681 gcgcaagcct gcggcacact cgccatcctc agcgaaggcg ggcgcaaaga aaacgaattc
    10741 ttcttcttcg ccggcataga cgaagcccgt ttcaaacgcc aagtcatccc cggcgaccaa
    10801 ctcgtctttg aagtcgagct gctgaccagc cggcgcggca tcggcaaatt caacgccgtt
    10861 gccaaagtgg acgggcaagt cgccgtcgaa gccatcatca tgtgtgccaa acgcgtggtt
    10921 tgagtgttca gaaaaaggtc gtctgaaagt tttcagacga cctgttgccg tcgcgcatct
    10981 tcgcggcaac acgacaggaa aggaaaaaca tgaccctcat ccacccgacc gccgtcatcg
    11041 accccaaagc cgaactcgac tccagcgtca aagtcggcgc gtacaccgtc atcggcccca
    11101 acgtccaaat cggcgcgaat accgaaatcg gcccgcacgc cgtcatcaac ggccacacca
    11161 gcatcggcga aaacaaccgc attttccaat ttgccagcct cggcgaaatc ccgcaggaca
    11221 aaaaataccg cgacgagccg accaagctga ttatcggcaa cggcaacacc atccgcgaat
    11281 tcaccacctt taatttaggc acggtaaccg gcatcggcga aacccgtatc ggcgacgaca
    11341 actggattat ggcgtactgc cacctcgcgc acgactgcgt ggtcggcaac cacaccatct
    11401 tcgccaacaa cgcctcgctt gccggacacg ttaccatcgg cgactacgtc gttttgggcg
    11461 gctacacgct ggttttccaa ttctgccaca tcggcgacta cgctatgacc gccttcgccg
    11521 caggcgtaca caaagacgta ccgccctact ttatggcatc gggctaccgc gccgaaccgg
    11581 cggggctcaa cagcgaaggc atgcgccgca acggttttac cgcagaacag atttccgccg
    11641 tcaaagacgt gtacaaaacc ctctaccatc gcggcattcc gtttgaagag gccaaggcag
    11701 acatcctccg ccgcgccgaa acccaagccg agcttgccgt attccgagac tttttcacac
    11761 aatcgacgcg cggcatcatc cgctgaccgt acccttttga tgccgtctga aaccccgaaa
    11821 gcgtttcaga cggcatcggt ttttttaaag cggtatattg tttgatcgat gcatcatttt
    11881 gtagatttca gaagtatggc agtcggcagc attgatgatt tctgccgccc gccacatccc
    11941 tattcggaca tttcattgtg acctccgccg ctgcttttaa agaattgcaa acaatttccg
    12001 cagcttgaac cggcctgttt tcggcgaaaa aaaccaaaag tatttttcaa aagaacatat
    12061 tgtcttattg gatattctgt gctgaaatta ctggacacta caaaagtggt gttttaaaaa
    12121 taaaacagac aaaggagaaa gccatgcaag tgtttttaga caatcccaaa gccttttttg
    12181 aaaccgtcag cggctgggtt tggggacctt tgatgctgat gctgctggtc ggcacgggta
    12241 ttttgctgac tgttttatta aaaggtttgc agttcacgat gttgggttat gcgctgaaac
    12301 aggcgtttat gccgccaaag aagcataaaa gcggcgaagg ccacgaaggc gatatttccc
    12361 atttcgcggc gttgatgacc gcgctgtccg ccaccatcgg tacgggtaac atcgccggcg
    12421 tggcgactgc ggtggtaacc ggcggcccgg gcgcggtatt ttggatgtgg atgaccgcca
    12481 ttttcggcat ggccaccaaa tacggcgaag gcgtgttggc ggtgaaatac cgcgtcaaca
    12541 attccaaagg cgaaatgtcc ggcggcccga tgtattacat cgaaaaaggc ttgggcaaaa
    12601 actggaaatg gatggccgtt gcatttgcgc tgttcggcac attcgcttcc ttcggtatcg
    12661 gcagctcggt gcagtccaac tcggttgcac aggcggtgca aaccagcttc ggtatcgaac
    12721 ctgcctatac cggcattacg ttgaccgttc tgactgccgt tgtcgtttta ggtggtatta
    12781 aaggcatcgc caaagccgct tctttcatcg tgcctgctat ggcggtgttt tatgtgttgg
    12841 gcggtctttc cattatcgcg attaattccg atgcactgat gcctgccgtc aagctgattt
    12901 tctccgatgc gttcagcgcg caggcagtgg cgggcggtgc tatcggtaca gtcatccgct
    12961 acggcgtggc gcgcggcgtg ttctccaatg aggcgggtat gggttctgcg cctattgccg
    13021 ccgcagccgc gaaaaccgac catcccgtcc gtcaggcctt ggtttctatg accggtacgt
    13081 ttttggatac catcgtcgtt tgctcgatta ccggcatcgt gttggtaatg ggactgctcg
    13141 gcgcgggcgg cgagtttgtc aaacctgaag tgagcggcgc ggcactgaca accgtcacat
    13201 tccaaaaaat gctgcccggc atcggcggct ggattgtcac catcggcctg attttctttg
    13261 cctactcaac cattctcggc tggtgctatt acggcgaaaa atgcgcggtg tatgttttcg
    13321 gcgagaaatt tgccggtttg taccgcgtcg gttatgtttc ttccgttatg ctgggtaccg
    13381 tgttgagcct tgatttggtg tggctggctt cggacacatt caacggcttg atggcattgc
    13441 ccaacctgat tgcactttta ttgatggcga aagtcatcgt caatgaaacg cgcgacttca
    13501 aacaaaaaat cacaaacggc gaattgccgc attaatatcc gaggccgtct gaatccgaat
    13561 cttcagacgg cacggcatat taagtctgtt ttgaaaaagc cggagggaga aacatgaaag
    13621 tgcttgtttt aggtgcgggt gttgccggcg tgtcttccgc gtggtatctg gcagaggcag
    13681 gacatgaagt aacggtcatc gaccgcgccg agggtgtggc gatggaaacc agttttgcca
    13741 acgcaggcca gctttcttac ggctatacca cgccttgggc tgcacccggt atcccgacca
    13801 aagcgctgaa atggctgttt aaaagccatc cgcctttgct gtttcgcccc gacggcagcc
    13861 tgtatcaaat cgaatggctg tggcaaatgc tgcaaaactg cacggcagcg cactatcaaa
    13921 ccaataaaga gcgcatggtc aggatttccg aatatagccg tgaaatgttc cgccgttttg
    13981 aagcgcaaac cggcatgaat tttgaggaac gcaaaaaagg gacgttgcag attttccgcc
    14041 aaaccaaaga agtcgaagcg gcagaacaag acattgccgt tttggaacgc tacggcgtgc
    14101 cgtaccgccg tctgaaaccc gaagaatgtg cagaatttga gcctgcgctg gcacgcgtta
    14161 cctccaaaat tgccggcggc ctgcacctgc ctgcagatgc gaccggcgac tgccacctct
    14221 tcactgaaaa cctatacaaa ttgtgtcagg aaaagggcgt acagtttcat ttcaaccaaa
    14281 ccatcagccg catcgaccat aacgggctgc acatcaaagc cgttgaaacc gaaacagggc
    14341 ggtttgaagc agatgccgtt gtctgtgcgc tcggctgctt cagtaggact gtgttggcgc
    14401 agttagacct cgaactgccg atttatcccg tcaaaggcta ttccttgacc ctgccggtca
    14461 ccaattcaga cggcgcgccg gtgtccaccg ttttagatga aagctacaaa gtcgccatca
    14521 cgcgctttga caacagaatc cgcgtcggcg gtatggcgga attgtcgggc tacgaaatca
    14581 aactgcccga aaaacgccgc gaaaccttgg ctttggtcgt caacgacttg ttcccggaag
    14641 gcggcgattt gagccaagca tcgttctgga gcggcctcag gccgatgacg cccgacagca
    14701 cgccgttaat cggtcgcacc cgctttgaca acctgtttct gaataccggc cacggtactt
    14761 tgggctggac catgtcgctg ggttcggcaa aattaaccgc cgatatcgtg agcggcaaag
    14821 acaccgaaat ccgcagcgac gatttgagcc tgtcgcgtta tcaggcttaa gctggaaagc
    14881 actaaggttt agcggcattt caaatttaaa ggccgtctga aaatcatttt tcagacggcc
    14941 ttttgtttca aaatccgtgt atccaatcaa taaaataaat aataactatt atcatataca
    15001 ttaaaaagtg ttagtctgaa cctgtcccag cttttagcgc aggttttctc atgcccgatt
    15061 tttcgatgtc caatttggcc gttgcctttt ccatcacatt ggctgccggt ttgtttaccg
    15121 tattaggcag tggcttggtg atgttttcca aaacgcccaa tccgcgtgtg ttgtcgtttg
    15181 gtttggcgtt tgccggcggt gcgatggtat atgtttccct gacggagatt ttcagtaagt
    15241 ccagcgaggc gttcgctgaa atttatgata aagaccacgc gtttgcggcg gcgaccatgg
    15301 catttttggc cgggatgggc ggcattgcgc tgattgaccg tctggtgccg aacccgcatg
    15361 aaactttaga cgcgcaagac ccgtcgtttc aagaaagcaa acgccgccat atcgcgcgag
    15421 tcggcatgat ggcggcgttt gcgattactg cgcacaattt ccccgaaggc ttggcgacgt
    15481 tttttgccac attggaaaat ccagcagtcg ggatgccttt ggccttggcg attgccatcc
    15541 ataatattcc ggagggcatt tccatcgccg cgccggttta ttttgccacc cgcagccgta
    15601 agaaaacggt gtgggcgtgt ctgctatccg gcttggccga gccgttgggg gcggctttgg
    15661 gctatttggt tttgcagccg tttttgtcgc ctgccgtgtt tggttcggta ttcggcgtga
    15721 tagccggtgt gatggtgttt ttggcgttgg acgagctgct gccggctgcc aaacgctatt
    15781 cagacggcca tgaaaccgtt tacggcctga caatgggcat ggcggtgatt gccgtcagcc
    15841 tggtattgtt ccatttttaa aacctgtatg ccaaaggccg tctgaaatga ttcagacggc
    15901 ctttttgcgt tataatccgc acatcaaaaa taaccttaat ttcacaaagt tccatcatgt
    15961 tagacaaata caatccagcc gaaatcgaat ccaaacatta tcaaaactgg gaagagcagg
    16021 gctatttcca acctgatatg gatttgacga aaccgtcttt ctccatccaa ctgccgccgc
    16081 ctaacgtaac cggcacgctg cacatgggtc ataccttcaa ccaaaccatt atggacggcc
    16141 tgacccgcta ctaccgtatg aaaggctgca acaccgcctg gattcccggc accgaccacg
    16201 cgggcatcgc cacgcaaatc gtggtcgagc gtcagcttgc cgcgcaaaac gtgtcccgtc
    16261 atgacttggg tcgcgaaaaa ttcttggaaa aagtgtggga atggaaagaa gtttccggcg
    16321 gcacgattac gcagcagatg cgccgcgtgg gctgttccgc cgactggacg cgcgagtatt
    16381 tcacgatgga cgacgtgcgt gccgaaaccg taaccgaagt gttcgtgcgc ctgtttgagc
    16441 aaggcttgat ttaccgtggc aaacgcttgg tgaactggga tccggttttg ggtacggcgg
    16501 tatcggattt ggaagtggaa agcgtggaag aacaaggctc tatgtggcac atccgctatc
    16561 cgctggcgga caatcctgcc gaagccgtta tcgtggcgac tacccgtccc gaaacgctgc
    16621 tgggcgacgt tgccgttgcc atcaatcctg aagacgaacg ttacacccat ttgattggca
    16681 aggaattaat cctgccgctg accggccgca ccattccggt tatcgccgac gaatacgttg
    16741 aaaaagactt tggtaccggc tgcgtgaaaa tcacgcctgc gcacgacttt aacgactacg
    16801 aagtcggcaa acgccacgac acgcgcctga ttaatgtgtt cgatttggaa gccaaagtgc
    16861 tggctaacgc cgaagtgttc aacttcaaag gcgaagcgca accaggcttt gccctgcctg
    16921 aaaaatacgc aggtttagac cgctttgccg cgcgcaaaca aatggttgcc gatttgcagg
    16981 aacaaggttt cttggtcgaa atcaaagcgc acacgctgat gacgccgaaa ggcgaccgta
    17041 ccggttcggt gattgagccg atgctgacca gccaatggtt tgtcgccatg tccgccacac
    17101 cgaacggcgg cgagcctgac agcgaattca aaggcttgag cctcgccgac aaagccaaaa
    17161 aagccgtcga cagcggcacg gtacgcttta tccccgaaaa ctgggtcaac acttacaacc
    17221 aatggatgaa caacatccaa gactggtgta tctcgcgcca actgtggtgg ggacatcaaa
    17281 tccctgcatg gtacgacaac gaaggcaatg tgtacgttgc ccgcaatcag gaagaagccg
    17341 aaaaacaagc cggcaaaacc ggtttgaccc gcgaagaaga cgtattggac acatggttct
    17401 cctccgcgct cgtgccgttc tccacgctcg gctggccgtc tgaaaccgac gaactcaaag
    17461 ccttcctgcc gtccaacgtc ttggttaccg gctacgaaat catcttcttc tgggtggcgc
    17521 gcatgattat gatgaccacc cacttcaccg gcaaagtacc gtttaaagac gtgtacatcc
    17581 acggcatcgt gcgcgaccac gaaggcaaaa aaatgtccaa atcagaaggc aacgtcatcg
    17641 accctgtcga tttgattgac ggcatcgact tggacaagct gctggtaaaa cgtaccaccg
    17701 gcctgcgcaa acccgaaacc gcgccgaaag tggaagaagc caccaaaaaa ctctttcccg
    17761 aaggcatccc cggtatgggc gcggacgcat tgcgcttcac tatggcgagc tacgccagcc
    17821 tcggccgcag cgtcaacttc gacttcaaac gcgccgaagg ctaccgcaac ttctgtaaca
    17881 aaatctggaa cgccaccaac ttcgtcttga tgaacaccga aaaccaagac tgcggctacg
    17941 gcgcaaccgc tgccgaaccg cgcggctatt ccttccccga tatgtggatt gtaggccgtc
    18001 tgaatcagac catcgagcag gttacgcaag cctacgaaac ctaccgcttt gatttggcgg
    18061 cagaaaccct gtacagcttc gtatggaacg actattgcga ctggtatttg gaacttgcca
    18121 aagtgcagct tcaaaccggc tgcgccagcc gccaacgcgc cacacgccat accttattgc
    18181 gcgtactcga agtcgccctg cgcctgctgc acccgattat cccgttcatt accgaagaac
    18241 tgtggcaaac cgtcgcccct atgtgcgacg cgaaaaccgc cgacagcatc atgctcgccc
    18301 gcttccccga agccgacggc ggcgatattg ttcagacggc attcgagcaa atgactgtgt
    18361 tgcaggattt gattggcgca gtccgcaacc tgcgcggcga aatgggcatc cagcccaacg
    18421 tgaaagcccc gctgtttgtc gaaagcgcag acgacttggc ggactacctc aaatacctgc
    18481 cgatgatgac ccgcctgacc gaagcacggc aagtcgccgc cctgcccgaa agcgaagacg
    18541 cgcccatcgc cgtctgcaac ggtgcgcgcc tgatgctgaa agtcgaaatc gacaaagccg
    18601 ccgaaaccgc ccgcttgagc aaagaagccg agaagctgca aaaagccttg gacaaactca
    18661 acaccaaact ctccaaaccc ggctacaccg aaaaagcccc ggcgcatctg gtggaaaaag
    18721 acaaagccga tttggcggag ttggaagaca aaatggcaaa agttcaaaat cagttggcga
    18781 agttgaaaga ctgatttgat tgaataaaca aggccgtctg aaaaatgttt ttcagacggc
    18841 ctcttttata gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaaa
    18901 tagtacggca aggcgaggta acgccgtatt ggtttttgtt aatccactat acatggcatt
    18961 gcatcggcac tgatgaaaac attcacagtg atgcaaaagt cgaatatctt caggacggca
    19021 gtttccgtgg cgatgctata ctcaaaatcg atgatgacgg caatatcttg gcataccgtg
    19081 ttgtcggctc agggaaatgg cgttttgaaa acaatgcctg cgcctagtcg cggataaaac
    19141 ttaccccgtg aagctgcgac tgcataatcg ccgccttcat cgccgacaac gccttcggac
    19201 ggacaaaatt gcggcggtac gccaatacga cccgccggct tggcggcgta ccttcaaacg
    19261 gaataatgct gaacagcata tgatcgtttt cggtcagcgc ggttgccggt aacacgctga
    19321 ttgccaaacc gctggcgacc atatggcgga ttgtattgat cgagctgccc tgcaatgtat
    19381 tggtcaaccc ctgtatacgt tgtttcgccg ccaattcgga acagcttgag agtacctgat
    19441 cccgcataca gttgccttcc gtcagcagca aaacctgctc ctcacccagc atccgtggcg
    19501 aaacggcatc cagttcctca aatgaatgcc ctttcgggac aatcacgaaa aacggttcgt
    19561 catacaaggg ttcggtaaca atgcccggct cttgaaacgg ttcggcaacg ataatcgcgt
    19621 caacgtcccc gcgtttgagc gactcggtca aagtatgcgt gtaattctct tccaacatca
    19681 aaggcatttt cggtgcagta cggcgcaacg agacaatcag tttcggcagc aggtacggcg
    19741 caaccgtaaa aatcagcccg agtttgaacg caccctccag ctcgttttgt tcttcatttg
    19801 ccaaatgcct gataagctct gcctcttcca acaccttacg cgcctgtgca acgatacgtt
    19861 cccccgcctc ggtcgtaata atatcgttgc tgctccggtc aaacaaagag acggcaagct
    19921 cttcttccaa tttcttaatg gcaatagaca aagtgggctg gctgacaaaa caacgccgcg
    19981 ccgccctgcc gaaatgacgt tcttgggcga ctgcgacgat gtaccgcaat tcggttaagg
    20041 tcatgtccta tacctttttc tgttccggca aagtaatgtt caactcaagc acatccatac
    20101 catcctgttt ttcctgggaa atacggatat tgtctaatga aacattcaca tatttggaca
    20161 ggacttccat taactcttta cgtaaagtcg gcaggtaatc cggagcctga ccttcttggg
    20221 cgcgctcttg ggcaatgatg atttgaaggc ggtcgcgggc aacggttgcc gttttctgct
    20281 ttctgccgaa taaaaattcg attaatgaca tatcttatcc tccaaacaga cgtttgaaga
    20341 agcttttttt ctcagcttcc aagaaacgca tttcacggtt ctcgcccaaa agacgggcaa
    20401 taacgtcctt atatgcctcg gaagccgcca cgctgtcctg atggatgacc ggttctccgg
    20461 aattggatgc ctgcaagacg ttttgggatt caggaatcac acccagcaaa ggaatatgca
    20521 gaatatcgca aatatcctgt acagacagca tttcgccttt tgccactcgt tcgggagaat
    20581 aacgcgtaat caacagatgt tctttaaccg aaccgccttg ctctgcctta tgggatttgc
    20641 tttgcaaaat tcccaaaatc ctgtcggagt cacgcacact ggaaacctca ggattggtcg
    20701 ttacaatggc ttcatcagca aaatacaacg ccatcaatgc accctgctca ataccggcag
    20761 gagagtcgca aataatatac tcaaagccca ttttcttgcc ggacagctcc tgcatcactt
    20821 tttctacgcc ctcgcgtgtc aaagcgtctt tatcccgagt ctgggaagcc ggcaaaataa
    20881 acaggttttc acaattttta tctttaatca aagcttggtt gagcgtcgcc tccccctgaa
    20941 tgacattgat caggtcataa acgacacgac gctcgcaacc cataatgagg tcgaggttac
    21001 gcaaacccac atcaaaatca attaccgcag ttttatatcc gcgtaatgcc aaacctgtcg
    21061 caatactggc actggtagtc gttttaccga caccgccctt acctgaagtt actacaataa
    21121 tttttgccac aatatttcct ttttaaatat caaacaatta ctctgagcca attgcactga
    21181 taaccaatcg gttatcctgc aacaatatct gtaccggctg cttgtgcaga tggttcggca
    21241 aatcctgttc aaaattacgg taaatacccg ccacagaaac cagttctgcc tgcatggagt
    21301 ggataaatat gcgggcagaa gtatcaccct tggcaccggc caaagcacgc cccctcatcg
    21361 gcgcataaat atgtatattg ccatccgcaa tcaattccgc cccctggctg accgcccccg
    21421 taacaatcaa atcgccatct tcggcataaa cctgctgacc ggtacggaca ggggatgtaa
    21481 tcaatactgt tttccttgct ttctgaccat cctccgtgtt ctgcacctca acctgaccca
    21541 gttctttaac attttccgaa tgagacagac aaaacagcaa atgatacttc atagccgcag
    21601 cagcccaacg ttcattagaa tgcttcagac ccaaaatttg cataccatgc cttgaaaaca
    21661 acgaaaccaa tgcagcaaga tccaaagact cgggataatc aaactcttga acatccagca
    21721 caaatggaac aacaccagac tcttgaaact tcttgcccaa tttgaccagc acatcttcca
    21781 aatcaaacaa gtctgacgta tgcaaagata tagacaatac gtccatcttt gtcgacttta
    21841 tatcgaaggc attcattata taaaccatca tagaattttt taatgatgta agtttaccgc
    21901 gcaaacctta gctattcaat taatatttta aacatgatag ccaataccct attacctatc
    21961 agatattgca aaaataacgc cacctgcttt tcggcagatg gcgttatatg actaaaatta
    22021 ctcagcagcc ggtttgtcaa ccaattcaac cagtgccaga ggtgcattat cacctttacg
    22081 gaatccgtat ttcaacaccc gaacataacc accgttacga gcagtaaaac gaggacccaa
    22141 atcgccaaac agttttacta caacatcacg gtcgcgagta cggtcaaatg ccaaacggcg
    22201 gtttgccaat gacggctttt tacccaatgt aatcaacggc tctactacac ggcgcaattc
    22261 cttggcctta ggcagagttg ttacaatagt ttcgtgagtc aataatgaat tcgccatatt
    22321 acgcagcatt gcagcacgat gactgctggt acggtttaat ttgcgattgc cattacgatg
    22381 acgcatatca attatccttt aattcttcat taaggctttt ccaagcctac aggtggccat
    22441 gcttccaact tagaacccag tgtcaaacct ttagatgcca atacttcctt aatctcattc
    22501 aaagatttac gtcccaaatt cggcgtttta agaagctcgg tttcagtgcg ttgaatcaaa
    22561 tcgccaatat aataaatatc ctcagctttc aaacaattag ctgaacgtac tgtcaattcc
    22621 agatcatcca ccggacgcaa aagaacaggg tcgataggag gtgctttttc ttcaacctcc
    22681 tccacaggcg taccctgcaa atcagcaaaa atagacatct gatcaatcaa aatacgtgcc
    22741 gcactgcgta cagcttcctc aggatcaata gaaccgtcgg tttcgatatc caaaaccaac
    22801 ttatcaagat ccgtccgctg ctctacacgt gcaggttcaa cctcaaagct aacacggctg
    22861 atgggcgaaa agctcgcatc caactggatt gcaccaatct gacggttctc atcacgaact
    22921 acctgacgac ctgaaacaga ttgataacca cgaccttgct ctactttaat ttccatctca
    22981 atttgaccgt tatcagccaa atgacaaatg acatgaccag gattcagaat ttctacatca
    23041 tgcggcaact caatatcacc ggcagatacg acacctgaac ctgatttctt caacacaagt
    23101 tgaacttggc tacgaccatg gagtttaaac acaatacctt taatattcag caaaatgtca
    23161 acaacatctt cctgaatacc atcaacagta gaatattcgt gtaatacacc ggcaatagct
    23221 acttcagtag gagcaaaacc attcatggat gacagtaaga tacggcgcaa agcattacct
    23281 aaggtatgac cgaaaccacg ttcaaatggc tgcatagata cttttgcacg agttgcagaa
    23341 aaagtattta catcaatttg acgaggtttc aaaaattcgg ttgtgctatt ctgcatttaa
    23401 ctgtccctca ctgagctagc attatttaga gtagaactct accaccagct gttcattaat
    23461 atcaccggtc aattccgagc gatccggcat gtttttgaac acaccctcaa gtttatccgc
    23521 atctacagaa acccaacccg gcaagccgat ttgagttgcc aaacccaatg cttcttgaat
    23581 acgtacctgt tttttggctt tttcacgaac tgagacaaca tcaccagctt tcacttggaa
    23641 agaaggaata ttgacaactt gtccattcac aactatcgcc ttatgagaaa caagctgtct
    23701 tgcttcagct cgggtagaac cgaaacccat acgataaacg acattatcca aacgagattc
    23761 cagcaactgc aacagcaact cgccggtaga acctttacga cgatcagctt ctgcgaaata
    23821 acgacggaac tgacgttcta atacgccata aatacggcgg attttttgtt tttcacgcaa
    23881 ctgcaaacca tagtctgaca aacgcggttt ttttgcacca tgctgaccgg gagcggaatc
    23941 aattttacat ttagaatcca aagagcggcg cgcactcttc aaaaacaaat ccgtaccttc
    24001 gcgacgtgcc aacttacatt tagggccaat ataacgtgcc atgtttcaaa tcactccaat
    24061 attaaatacg acgtttttta ggcggacggc aaccgttatg aggcaacggg gtaacgtcag
    24121 taatgctggt aatcttgaaa ccaagagcat tcaaagcacg tacagaggat tcacgacctg
    24181 gacctggacc tttaatacga acctctaaat ttttaacgcc atactcttgg gcaactttac
    24241 cagctgcttc tgctgcaact tgtgctgcaa atggtgtact tttacgagaa cctttaaaac
    24301 cagcgccgcc agaggtagcc caagacaacg cattgccttg acggtcagtg attgtaatga
    24361 tggtattgtt gaaagatgca tgaacgtgca caataccctc actcacggtt ttacgtactt
    24421 ttttacgtac acgtgaagct gtgtttgctt tagccattaa taaaattcct taaaatttat
    24481 ttcttaccag caatcgcttt acgcggacct ttgcgggtac gcgcatttgt acgagtgcgt
    24541 tgaccgcggc atggtaagcc gcgacgatga cggaagccac gatagcagcc catgtccatc
    24601 aatcgcttga tactcatagt tacctcacga cgcaaatcac cttctacttc atacttggca
    24661 acttggtcac gcaaagcatc taattgagtc tcgtccaaat cttttgcttt agtatcaggc
    24721 gcaatatttg cagcctcaca aatcaattta gcacgagtag caccaatacc gtaaatagcc
    24781 tgaagaccaa ttacgatgtg tgcgttatta gggatattta cccctgcaat acgagccata
    24841 ttttttcctt tttagggcaa agtgtgtcac tatatcacag aatcacatta aaagaaatat
    24901 tccattaacc ttgacgctgt ttgtgacgga gatcagtaca aattacacga actacacgat
    24961 ttcgacgaat aatcttgcaa tttcggcaaa ttttcttaac agatggttgt acacgcattt
    25021 tattttcctt ttattggttt atcttgctct gaaaacgatt cgagccctag ttagatcata
    25081 aggtgtcagc tctactgtga ccttatctcc cggagaaata cgaatgtaat gcatccgcat
    25141 cttcccagaa atatgaccca atacaatatg gtcattctca agttttactt taaatgttgc
    25201 attaggtaaa gtttcaagaa tttcaccttg catttggata gtatcttctt tcgccataat
    25261 tctatttccg agaaaatgat ttcatttctg aacgagtcat taacttatca tactgttgag
    25321 taagcctata cgaatttatt tgtgtactaa aatccatcgt tacaacaact agaatcaaca
    25381 aagacgtgcc acccaaataa aaaggtacat ttaaaaccgt agttaagaac tctggaatta
    25441 aacaaatagt tgtaatataa agagctccaa acaatgtcaa acgtaataca actttttcta
    25501 aatacctaga ggtctgctca ccaggtctaa tcccaggaac aaaagcacca ctctttttta
    25561 aattctctgc catttcttta gggctaaaaa ccaaagccgt ataaaaataa caaaagaaaa
    25621 taactgtcgc tgcaaataaa gccatataca gcaattgacc gtgttgtaac aatccagcta
    25681 ttttgtgcaa aacactattt gtatcagccg aaccaaacca acctaaaaga gtagatggaa
    25741 atagaataat actggaagca aaaattgggg gaataacacc agccatattc aacttgaaag
    25801 gcatatgcgt attttgacta cccgccctac cattaaactg gcgttttgca taatgaatag
    25861 gaatcttccg ctgtgcactt tcaaagtata caaccaaata aattaataat aaggcaccaa
    25921 atacaataaa caacgccgta agcatgctca tagaaccttg gttcgtcagt gtaaccagct
    25981 ttgcaatacc cgaaggaata cctgaagcaa tacctgccgt aatgattaaa gaaataccgt
    26041 tcccgatacc cctttcagta atttgctccc caagccacat aagaaacatg gttcccgtta
    26101 ccaaagaaac taccgtggaa acatgaaact caaatgaact tgttacaaca attccttgct
    26161 gaaatacgaa agatgcaaca cctagacttt gaagaattgc taacaaaaca gtaccatacc
    26221 tagtatattt cgtaattacc tttctaccag cctccccttc tttttttaaa gccttcaatg
    26281 atggcaaaat ttcagaagcg agctgtacaa taatagaagc tgaaatatat ggcataattc
    26341 ctattgcaaa tatactaaag cgctctaacg acccaccgga aaacatattc aatattccca
    26401 ggatgccgtt tccagcgctt tcgtataatt tagctaaagc aacagcatca actccaggta
    26461 cgggtatatg ggcaccaatt cgaaaaacaa tcaatgctcc aaatagaaac aaaagacgtt
    26521 tcttaagatc tccaaatttg gatgaacctg atgacgtttg ttgattagcc acaatattaa
    26581 accttacatt tcaatcttac caccaacagc ctcgatagca gctctcgcac ctttggtaac
    26641 tttaataccc ttcaaagcaa ctgccttaga aatttcacca gaagcaataa ctttaacatt
    26701 agagactgta gatgcaatca gacccgcttg ctttaagacc aaaatatcaa tctcattaac
    26761 agcaattgat tccagttcac ttaaacgaag ctgtgcatta gctgatgctg ttaaagattt
    26821 aaaacctctt ttagggaggc gtcgttgcaa gggcatttga ccaccctcga aacccacctt
    26881 atgaaaccca ccagaccggc tcttttgacc tttatgacca cgaccacccg ttttgccaag
    26941 accactacca ataccgcgtc caacacgacg accagcatgc gtagcaccaa cagcaggttg
    27001 aattgtattc aaaaacatat caagactcca ctttcaacaa gtagctgatt ttattaatca
    27061 taccacggtt ttcaggggta tctaaaacct ctaccgtatg ctcgcgacga cgcaaaccta
    27121 aaccgcgtgc acatgcacga tgagattcaa ttgtaccaat caggctttta accaatgtaa
    27181 ccctaatctt tttttgttca gccatggtta actcccaaaa tgtcttccac tgtcaagcca
    27241 cgtttggctg cgatatcagc aggagtatgc aacttagaca aaccatctaa tgttgcacgt
    27301 acgatattat atgggttagt agatccgtgc actttggcgg agatattatg aatgcccata
    27361 gcatcaaaaa ccaaacgcat aggtccaccg gcttttacgc cactaccctc tttagcaggc
    27421 tgcataaata ctttagtagc accatgtcga ccaataacct catgatgaat cgtaccattt
    27481 tttaatggta ccttaatcat agagcgtcgt gcttgatcca tcgccttttg gactgcaaca
    27541 ggcacttctt ttgacttacc tttacccata ccaatacgac catctccatc accaacaaca
    27601 gttagcgcag agaaagccat aatgcgacca cctttaacta ctttggttac acggttaact
    27661 gcgaccatct tttcaatcag accgtcaccg cgttcttcaa tttcatgttt tgccatctga
    27721 aagtctccaa atatttagaa gcttaaacca ttttcacgag cagcttcagc caaagccttc
    27781 acacgaccgt gatattggaa acctgaacga tcaaaagcaa ccttttctac acctgctgct
    27841 ttagccttct cagcgatacg tttaccaact attgcagctg cttcaacatt gcttccagat
    27901 ttcagactac cgcgcacctc agcttccaat gtagaggctt gagccaatac tttatcacct
    27961 tcagcactaa ttacttgagc ataaatatga ttattgcttc ggaacacaca taatcttacc
    28021 attttcaagt ccgcaatacg agcacgggtt ttgcgtgcac gacggagtcg ggttgtatgt
    28081 ttatccatta gtgaacctca attatttttt cttggcttct ttcattacca ctacttctcc
    28141 tacatagcga acacctttac ctttataagg ctcaggagca cggaacgcac gaatctcagc
    28201 agcaacttga ccaacaactt gtttatccga gccggttaaa acaatctctg tttggctagg
    28261 agtttgaacg gagacacctt caggcatttc atatacgatc ggatgagaaa aacccaaaga
    28321 cagattcaag attttacctt gtgcttgagc acgataaccc acacctatca attgcaatct
    28381 tttctcaaaa ccttctgaaa cacctttaac catattgctg actaatgcgc gagcagtacc
    28441 agacattgca tttgcttgtt tactgctgtt attcgcaaca aaagccaatt tgccatcatt
    28501 aaattcaatg gctacatcag aatgcaaagg aaaagacaat tcaccgttct tacccttaat
    28561 aactaatgcc tctgttccaa attttacttc tacaccagcg ggaacagtca ctgggttttt
    28621 tgcgacacgt gacatttctt ttcctccact aggctacaat gcataacaac tcaccaccaa
    28681 caccttgaga acgtgcttta cgatcagtca ttacaccttt agaagtacta acaatagcaa
    28741 tacccaagcc attcataaca cttggaatct cactagacgc tttataaata cgcaaaccgg
    28801 ggcgagatac acgcttgatt tgttcaatta caggacgacc tgcatagtat tttaattgaa
    28861 tttccaatat agactttacg tcagatgaaa ctgcgaagtc ctcaatatat ccttcttctt
    28921 tcaatacctt tgcaatagca cactttaatt ttgaagaagg cattgcaacc gctgctttat
    28981 tagcacgttg cgcattgcgg atacgagtca acatatcgga aataggatca tgcatactca
    29041 ttcttaatta ctcctattac cagctggctt taacaacacc cggaatttcg ccacgcatgg
    29101 cgatttcacg gattttaata cgacccaaac caaatttacg gaaagtacca cgagggcgac
    29161 ctgtcaaagc acaacgacga cgttgacgca caggtgccgc attacgagga atggattgaa
    29221 acctcaaacg agcctcaaaa cgctcttcct cagttgcatt cgaatcattg attaccgctt
    29281 taattgccgc gcgtttagcc gcatattttt tagccaaagc ttgacgtttc agattacgat
    29341 taataagtgc tttcttagcc atgattatcc tttgaacgga aatttaaaca atgacaataa
    29401 agctttcgct tcctcatcgg tttttgctgt agtagtaata gtaatattca aaccacgcaa
    29461 agcatcaatt ttatcgtatt caatttccgg aaaaataatt tgctcacgaa cacccatatt
    29521 gtaattgcca cggccatcaa atgatttacc gctcacacca cggaagtcac gtacgcgagg
    29581 taatgcaata gtaatcaaac gatccaagaa ttcaaacatt tgatcacgac gcaatgttac
    29641 tttgcaacca accggatagt tatcacggat tttaaaacct gcgatagatt tacgggcaac
    29701 agtaacaacc ggtttttgac cggcaatttt ctctaaatcg gaaacagcat gttccataac
    29761 ttttttgtca gcaacagcct cacccacacc catattcaag gtgatttttt caatacgcgg
    29821 gacttccatt actgatttgt aaccaaattg tttaaccaat tcaggaacaa ctgtctcttt
    29881 ataaaactct ctcaaccgag ccatgttatc tccttatgcc ccaatgatag agccatttga
    29941 tttgaagaaa cgaacgcgtt taactttgcc ttcattttca atcagcttaa taccaacacg
    30001 gtccgcttta ttagtttccg gattcaggat tgcgatatta gaaatatcca aaggcatttc
    30061 tttagtaata ataccgccct caatgccacg cattggatta ggtttttgat ggcgttttac
    30121 aacattaacg ccctcaacaa caactttatc acccaacact cgaactactt gaccctgctt
    30181 acctttatcc ttaccagcaa ttactacaac cctatcgcct ttaatgattt tattcatcgt
    30241 gccattcctt ataatacttc aggtgccaat gaaacgattt tcataaatcg ctcagtacgc
    30301 aattcacggg ttaccggacc aaagatacga gtacccaaag gttcaagttt attattcagt
    30361 aacacggcgg cattgttatc gaatttaatt aacgcaccat caggacgacg tacaccctta
    30421 gcagtacgaa caactaccgc attatataca tcgccttttt tgacacgacc acgcggagcc
    30481 gcatctttaa ctgccacttt aataatatcg ccaacagaag cgtagcgacg cttagatccg
    30541 cccaatacct tgatacacat tacgcgacgc gcaccagagt tatcagccac atctaagatg
    30601 gtctgcattt gaatcatgtt attaccttta aattaaccaa cttaatttac cactttcaga
    30661 taacttacag caaagccgct gcttattaaa tgaaaccttg cggttcaagt aaaccagtct
    30721 tggaccccga aagggaagaa acttccagaa gaaactgaaa gacaggaaac gaagtttaca
    30781 cgcaaattaa atttgctgca atacttcgtt tcccattcca agcacgttgc tttaattctt
    30841 aaatagaacg tgctttctca accagctcac tgacaaccca agatttagtt tttgacaatg
    30901 gacgggattc cgatataaca accacatcac caattccata ttgattattt tcatcatggg
    30961 catggatttt agtagataac cgaataatct taccatacag cggatgtttt actttacgct
    31021 caaccaatac tgttacggtt ttatccattt tgtcgcttac tactttgcct tgcaaagtac
    31081 gaacattttt agtttcgctc attacttagc acctttttca gttaaaacgg ttttaatacg
    31141 agcaatatcg cgacgtacac gtttcaattc acttggtttg cctaattgac cggtagcgtt
    31201 ttgcatacgt aagccaaact gagctttcaa caagtccaac aaatctgcat tcaactgctc
    31261 aacggatttg tctttcaatt catttgcttt cattattgac ccacctgtct tactacaaag
    31321 gttgtaggaa taggcaattt ggcagcagcc aactcgaatg cttcacgagc cagttcctct
    31381 ggaacgccat ccatttcata caacacttta cctggtttaa tttcggcaat gtaatattcc
    31441 acgttacctt taccgccacc catacgaact tgaataggct tttcagtaat cggtttatca
    31501 gggaatacac gaatccaaat acgaccacca cgtttgatat gacgggtcat tgcacgacga
    31561 gcagcttcga tttgacgggc agtcaaacga ccacgaccta cggctttcaa gccgaactca
    31621 ccgaaactta ccttattacc gcgagtagcg atgccagtat tgcgaccctt ttgttgctta
    31681 cggtatttca gtctagttgg ctgcagcatt acgtctacct gcctttcttt gtttactctc
    31741 atgttcaggt ttggaagatt taatattgcc ttccgtataa acccaaactt tcagacccaa
    31801 tacaccatat gtggtgtgcg cttcgctggt tgcataatct acatttgcac gtaaagtatg
    31861 cagtggcaca cgaccttcac gataccattc gctacgggca atatccgcac cattcagacg
    31921 gcctgaagtc ataatcttaa tgcctttagc accagaacgc attgcatttt gcattgctcg
    31981 tttcatagca cgacggaatt gaacgcgctt ttccaactgc tgggcaatac cgtcagcaat
    32041 aatttgagca tccaactcag gacggcgaat ctcttcaata tttacatgaa caggtacacc
    32101 catcaagact tgcaagtcac gtttcaaaac ctcgatatcc tcaccttttt taccgataac
    32161 cacacccgga cgagcggagt gaatggtaat gcgtgcagat tttgcagggc gttcaataac
    32221 cactcgacca accgaagcat tggccaattt ttgacgcaaa taattgcgaa catcgatatc
    32281 ctgcttcaaa acagtagaaa agtcggtgct tttagcaaac cattttgaag cccagtcttt
    32341 agttaccgcc aggcgaaagc ctgtagggtt aatcttttgt cccatagctt ttccttagtt
    32401 acccactgtc acattgatat gacaagtttg tttttcgatg cggttaccgc gacctttggc
    32461 gcgagcttga aaacgtttca agcttgggcc tttgtcaaca aagatagtta ccactttcag
    32521 ttcatcaatg tccgcaccgt tattgtgctc ggcattagca atagctgact ccaatacttt
    32581 tttaatcagc tcggcacctt ttttaggact gaaagccaaa atattcaaag cttgggcaac
    32641 gtctttacca cgaatcaaat cagctaccaa acgagccttt tgagcagaga tacgggcatt
    32701 tttatgttgt gcatttactc tcatgattca ccttatttct ttttagcctt tttatcggcc
    32761 aagtggcctt taaaggtacg ggtcaatgag aattcgccta atttatgacc aaccatattg
    32821 tcgctgataa acacaggcac atgggtgcgg ccgttgtgca cagcaatggt cagaccgata
    32881 aaatcaggca gaatggtaga acgacgagac caggttttaa tcgggcgttt gtcgttgctt
    32941 gcgcgagcag catctacttt tttcagcaaa tgcaggtcta catatgggcc ttttttcaat
    33001 gaacgagcca tactaaatta acctttattt gagtaacggc gacgaacaat catgttatcc
    33061 gtgcgtttgt tattacgagt gcggtagcct ttagcaggag taccccatgg gctgaccggt
    33121 tcgcgggcct cgcccgtacg gccttcacca ccaccatgcg ggtgatcgac aggattcatg
    33181 acaacaccgc gtacggtcgg acgaataccg cgccaacggt tggcaccggc tttaccgatt
    33241 tttttcaggc tttgctcttc gttaccaact tcaccgatgg tcgcacggca atttacgttg
    33301 attttacgaa cttcgccaga gcgcagacgg acttgagcgt acgcgccttc tttagccagc
    33361 aataccgcag aagcaccggc agaacgtgcg atttgagcac ctttaccggg tttcatttcg
    33421 atacagtgga tagtcgtacc aacgggaatg ttgcggatcg gcagggtgtt gcctactttg
    33481 atggcagctt cagcaccgga aaccaatacg gcaccgactt gaataccgcg aggagcgatg
    33541 atgtaacgac gctcgccgtc tgcatagcac aacagtgcga tgaaggcagt acggttagga
    33601 tcgtattcga tacgctctac cttagcagga atgccgtctt tgttacgttt aaagtctaca
    33661 acacggtaat ggtgtttatg accgccgcct ttgtgacggg tggtgatatg accattactg
    33721 ttacgaccgg cagtagaatt tttcttttcg agcaaaggtg cataaggcgc acctttgtgc
    33781 aaaccttctg ttaccacgcg aaccatgccg cgacggcctg cagaggtcgg cttcatttta
    33841 acgattgcca ttttgtttat tccttatctg cagctgcagc agcggcttcc aaatccaact
    33901 cttgaccggc agccaagctt acataagctt ttttaacatc gctgcggcgg cccaaagtac
    33961 gaccaaaacg cttagttttg cctttagttg taacggtagt tacagaagca acttgaacac
    34021 caaacagcag ctcaacagcc gctttgattt caggtttggt tgcatttgcc aaaactttaa
    34081 acgtcatttg gttgcgtttt tcagccaata cgttgctttt ttcagaaacg ataggtgcca
    34141 aaatcacttg agtcaaacgt tgttgattca tacccattgc tcctctaatt gtgcaactgc
    34201 atctttagtg atgattactt ttttgtaacg cagcaagctg taaggatcaa cttgttgagc
    34261 ttccaaaacc aacacgtttg gcaagttgcg tgaagccaag taaacattct cgtcgagctg
    34321 tttggttaca aacaacactt gctctagacc cagatttttc acttgttcag caaaaacttt
    34381 ggttttagga gtttcggcag tcaacgcctc aatcgcaaac aaacgctcgt cacgagtcaa
    34441 ttgggacaga atagtcgcca taccggcacg gtacattttg cggtttactt tttgagtgaa
    34501 gttttcgtcg ggtttgttcg ggaacgcgcg accaccttta cgccacagcg gagaagaagt
    34561 cataccggaa cgggcacggc cggtaccttt ttgacgccat ggttttttgg ttgagtgttt
    34621 tacttcggca cgggtttttt gagcgcggtt accggagcgg gcgtttgcca agtaggcatt
    34681 taccagctga tgaaccaacg cttcattgta ttcgcgggcg aacaaagcat cagaaacaga
    34741 caggctgcct gaaacttgtc ctttagcgtc aattactttc aattccatta cgcacctact
    34801 ttcacgctgg gacgaactac aacatcgctg ttgaccgcac ccggaacagc acccttaacc
    34861 aacagcagtt ggcgttctgc atcaacacgg acaacttcca atttttgaac agttgccttg
    34921 gtgttgccgt attggccggc catgcgctta ccggggaaca cgcgacccgg gtcttgtgcc
    34981 ataccgatag aacctggaac gcggtgagag cgggagttac cgtgggaagt acgttgggcg
    35041 ccgaagttat gacgtttaat cgtgccggag aaacctttac ctttagaggt accggttaca
    35101 tcgaccagtt gaccgacttc aaacatagaa acggtgattt cgtcaccagc tttcaattca
    35161 gccagttttt cttcagtcaa agcaaactca atcaaaccgc gaccggcttc aacacctgct
    35221 tttgcaaagt gcccggcttc ggctttgttg acacgattgg cttttttctg accaaaggta
    35281 acttgaacgg cagtatagcc gtcagtatct ttggatttta cttgtgtaac gcggttggca
    35341 gacatatcca aaacggttac cggaacagaa acaccctgtt cgtcgaacac gcgggtcata
    35401 ccaactttgc gtccaaccag acctaaagtc atgattattt tccttttaaa gtaaagggac
    35461 aggctacgat tggcctgtct ttcagacaaa gttaaacttg gcacaaatgt accaagctcg
    35521 gcattatatc tgacaagtta aagaaatatc aacagaaata tcagaaatat cttcaatatg
    35581 ccgtctgaag cgttttgaat tttcagacgg catagggtca gactctttta aagggtcggt
    35641 atccggtcat cacagcgtat gcatctttct ccgacaaacc ggaatatggt tgatgactgt
    35701 aatcggggat gctcagttcg tcaaagcggc aaaacaggtt gaaatcgatg cgggtgatga
    35761 ggctgtgttc gagttcggga tcggagaggc tgtgccattg tccgagcaga acggctttga
    35821 acatggacaa cagcgggtag gcgggacgac cgcggtggtc tcggaggtaa cgggtttttt
    35881 gacggttcag gtattgttcg atcggttgcc aatcaatcac ctggtccaac ttcaatagtg
    35941 ggaaacggtc gatgtgtttg gcaatcatgg cttgggcggt ttgctgaaag aaggtgctca
    36001 tgagaaatct cctaaatgtc ttggtgggaa tttaggggat tttggggaat tttgcaaagg
    36061 tctcggcata acataaaaaa tccccaagca ttgattgctt ggggattttc aatagtccga
    36121 attattggac tttgatttct acatcaacac cggccggcaa atccagcttc atcagcgcat
    36181 cggtagtttt atcggtccaa tccacgatgt ccatcaggcg caagtgggtg cggatttcca
    36241 attgttcacg ggaagttttg ttcacgtgcg gagaacgcag aatgttgaaa cgttcgattt
    36301 tggtcggcaa cggaatcgga ccttttacaa cggcaccggt acgttttgca gtttcaacga
    36361 tttcttgtgc agaacggtca atcagggcgt aatcataagc tttcaggcgg atacggattt
    36421 tttggtttgc catttatcaa tatccttca
//
LOCUS       DAWGBY010000007        35783 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.007, whole genome shotgun sequence.
ACCESSION   DAWGBY010000007 DAWGBY010000000
VERSION     DAWGBY010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35783
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.007"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            80..1045
                     /locus_tag="WHG62_000334"
     CDS             80..1045
                     /locus_tag="WHG62_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1724504.1"
                     /translation="MLRLTALAVCTALALGACSPQNSDSAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1209..2177
                     /locus_tag="WHG62_000335"
     CDS             1209..2177
                     /locus_tag="WHG62_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ1724505.1"
                     /translation="MTAKPFSLNLTNLLLLAALFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMLISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFVAY
                     ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDILGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAYAV"
     gene            2167..3141
                     /locus_tag="WHG62_000336"
     CDS             2167..3141
                     /locus_tag="WHG62_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ1724506.1"
                     /translation="MPSENKIEFMQGSPRPLWAAFALLLICCGLFLTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTLGGV
                     GYTSLPAVGKFGFELAVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCIGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3186..3812
                     /locus_tag="WHG62_000337"
     CDS             3186..3812
                     /locus_tag="WHG62_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724507.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGIQGRFARRNLLSFGAGEINGTLTLRRKDNGKTVAVSLNAALQPFAPE
                     MRELMPKAVSGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3895..4653
                     /locus_tag="WHG62_000338"
     CDS             3895..4653
                     /locus_tag="WHG62_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ1724508.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLADTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPNDIFTAANIKTLFDMDVDVLDYEGKKLVIHHI"
     gene            4969..6186
                     /locus_tag="WHG62_000339"
     CDS             4969..6186
                     /locus_tag="WHG62_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HEZ1724509.1"
                     /translation="MKHFPSKVLTTAILATFCSGALAATNDDDVKKAATVAIAAAYNN
                     GQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQ
                     NVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFAEETKTN
                     IVKIDEKLEAVADTVDKHAEAFNDIADSLDETNTKADEAVKTANEAKQTAEETKQNVD
                     AKVKAAETAAGKAEAAAGTANTAADKAEAVAAKVTDIKADIATNKDNIAKKANSADVY
                     TREESDSKFVRIDGLNATTEKLDTRLASAEKSIADHDTRLNGLDKTVSDLRKETRQGL
                     AEQAALSGLFQPYNVGRFNVTAAVGGYKSESAVAIGTGFRFTENFAAKAGVAVGTSSG
                     SSAAYHVSVNYEW"
     gene            complement(6252..6590)
                     /locus_tag="WHG62_000340"
     CDS             complement(6252..6590)
                     /locus_tag="WHG62_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ1724510.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            6742..10704
                     /gene="purL"
                     /locus_tag="WHG62_000341"
     CDS             6742..10704
                     /gene="purL"
                     /locus_tag="WHG62_000341"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ1724511.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFVG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDRQKQQWAALLHDRMTESVLTDIDAAAQLFHHIQSET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDAFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVKDVRKTVTPELKNVEDSVLLFIDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTSRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVNNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGITNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLFAGARKALG
                     "
     gene            10799..11557
                     /gene="gloB"
                     /locus_tag="WHG62_000342"
     CDS             10799..11557
                     /gene="gloB"
                     /locus_tag="WHG62_000342"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ1724512.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            11871..16344
                     /gene="mspA"
                     /locus_tag="WHG62_000343"
                     /gene_synonym="ausI"
                     /pseudo
     CDS             11871..16344
                     /gene="mspA"
                     /locus_tag="WHG62_000343"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
     gene            16576..18030
                     /gene="mgtE"
                     /locus_tag="WHG62_000344"
     CDS             16576..18030
                     /gene="mgtE"
                     /locus_tag="WHG62_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ1724513.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLAELHPADVADVLESLPPRERNIVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITIDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTDMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMVAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLSLATLFLL"
     gene            complement(18116..19024)
                     /gene="hslO"
                     /locus_tag="WHG62_000345"
     CDS             complement(18116..19024)
                     /gene="hslO"
                     /locus_tag="WHG62_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ1724514.1"
                     /translation="MNQTAINRADARTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRCALGELLAAGVLLSGNLKNEGTLIVQVQGQGKLKMLVAEATSDRTVRATARWDET
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGGSIAQMLVNYMKRSEQLDT
                     HIALSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFESSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            19269..20024
                     /locus_tag="WHG62_000346"
     CDS             19269..20024
                     /locus_tag="WHG62_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ1724515.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPVNRAPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNADELIGSAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            20043..20261
                     /locus_tag="WHG62_000347"
     CDS             20043..20261
                     /locus_tag="WHG62_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724516.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            20406..20750
                     /locus_tag="WHG62_000348"
     CDS             20406..20750
                     /locus_tag="WHG62_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ1724517.1"
                     /translation="MNIIRALLIILGCLATGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLI
                     TGKVHRWIRSII"
     gene            20750..21442
                     /locus_tag="WHG62_000349"
     CDS             20750..21442
                     /locus_tag="WHG62_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ1724518.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTVVL
                     IAYLKILGIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            21509..22729
                     /gene="argJ"
                     /locus_tag="WHG62_000350"
     CDS             21509..22729
                     /gene="argJ"
                     /locus_tag="WHG62_000350"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ1724519.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLSFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIASGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVVD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            22789..24198
                     /locus_tag="WHG62_000351"
     CDS             22789..24198
                     /locus_tag="WHG62_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ1724520.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETTAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            24389..25780
                     /gene="hrpA"
                     /locus_tag="WHG62_000352"
     CDS             24389..25780
                     /gene="hrpA"
                     /locus_tag="WHG62_000352"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ1724521.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKAIAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSQHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARHGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            25881..27008
                     /locus_tag="WHG62_000353"
     CDS             25881..27008
                     /locus_tag="WHG62_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724522.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKIATEPPSALRENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            27185..28762
                     /gene="lpt3"
                     /locus_tag="WHG62_000354"
     CDS             27185..28762
                     /gene="lpt3"
                     /locus_tag="WHG62_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HEZ1724523.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKTSRLLIALFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRHKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSRIGQGSIQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLSIRDGKAEYVYPQ"
     gene            28864..32073
                     /locus_tag="WHG62_000355"
     CDS             28864..32073
                     /locus_tag="WHG62_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ1724524.1"
                     /translation="MDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEVA
                     FRRPPEIRQLTSSENQGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEAR
                     EIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLP
                     EMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWV
                     ENPTSAATAKTVGFDNPTYATQQPTPSPEREGRGEGKTVAAQTNFSATAANPLPQERE
                     QSASASTFSDDLRPANLQQTAPSPVGEGWGESKTVATQTNFSATSTLSDDPKPKKQPA
                     PQKGRLKPLPLADIRTFEAWLKTAERNNPRLLFLSRDDLMQHAAVHITEEQFPKFWQT
                     ADGKFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPK
                     QIRRICVPVPDFITKFLESNPDRQATIIPQLAHFIAKSASDMRILEQIDQDAWAAQEL
                     PEHCYLNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTFRDNTQEFERDNVTTWDIGT
                     LPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQ
                     VKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKR
                     ARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAPGFATRTPWA
                     QWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKNDGLVKQGLPISDGL
                     AAFKWMIEELRVSLFAQELKTPYPVSVKRLMKEWERLNK"
     gene            32132..33739
                     /locus_tag="WHG62_000356"
     CDS             32132..33739
                     /locus_tag="WHG62_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ1724525.1"
                     /translation="MKSENNYERIVQNSKKFQHSQKNEMQKRITDLLQQLTNGIHERD
                     QIMAVSLLGAIAGHNTFLFGPPGTAKSLISRRLACAFENPQYFEYLMNRFSTPEEVFG
                     PVSIKALKEDRYLRKIEGYLPTADFAFLDEIWKSSPAILNNLLTIINEHIFKNGDERF
                     NVPLKALIAASNEIPPENQGLEALYDRFIIRLLVPPIEQEENFNRLLDSKPSSDKPEI
                     SEDLRISYHELAKWREQLHKVRLSTDTLLIIKYIREELAAQFDKLGVYVSDRRWQRAA
                     VLLKASAFCNGRKETNHSDVILLKYCLWTTPENRESVEQIVMNAIKSCGFDTGIDLAE
                     LDREKESLDKEINKELYHSQDVYETVEMSGKKYFPVQAVFKNVHNSHANKELKIYVPY
                     SKFRSKEKFYPIDSTGNEIQEIECEFDGQGCCKLELKVRGGHWNEQYKPLKFKPNILF
                     HKGDKKSDVNERLIHSLTQSISDIRKQLIDTQKQVEKKYEKYQQYLQSPFVAQADIDV
                     AISGILDQIDKLNLRIKDCERLESLCR"
     gene            33730..35190
                     /locus_tag="WHG62_000357"
     CDS             33730..35190
                     /locus_tag="WHG62_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEZ1724526.1"
                     /translation="MSLNRKLSEQIRWIKASLQIDYADLFKQHGSLNGQIQQRLSDWQ
                     YQAKLALLQKNPFILHEEKLKKHQQTEIFNQQSVDDYRYFCKLAGVPFEKEFWQQELT
                     QSKNSKPNKQNLPLKLLTGKWQQQLDYAKSQWYLKQLNQLRQEFIDKLKQELDTIRQL
                     AEQLEQFGFEAGLWFDNSIGNLSQQNIEEMKRWLNYLTQDKNAQQIAELLGKMRQIEQ
                     SEKIEQVKQTVYTKSPQIDVNSREEIIGLRLGKDLEYVLPSELALMADEETSTLFDLK
                     FLESKLMCFELQGMTYCDAPTEIIVEQKSQEDEKLGPMILCVDTSGSMVGLPENIAKA
                     MALFLGAKAKSENRSCFVINFSTGIETFELTSKTGISNLIAFLRQSFHGGTDAAPALR
                     HALKMMEQEIYQKADLLMISDFVMNSLPDDLLASIEIQRETGNQFNSLVIGDAFMSKR
                     LKTHFDREWIYNPNVQTIQELVQFKKDIFNKQVVNS"
     gene            complement(35544..35783)
                     /locus_tag="WHG62_000358"
                     /pseudo
     CDS             complement(35544..35783)
                     /locus_tag="WHG62_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         9179 a        10454 c         8664 g         7486 t
ORIGIN      
        1 tatcatttat cctttctaaa gccgttccgg tttgtccgac cggcggcttt gccccaatat
       61 ccccattttg gagacaccta tgttacgttt gactgcttta gccgtatgca ccgccctcgc
      121 tttgggcgcg tgttcgccgc aaaattccga ctctgcccca caagccaaag aacaggcggt
      181 ttccgccgca caatccgaaa gtgcgtccgt taccgtcaaa accgcgcgcg gcgatgttca
      241 aataccgcaa aaccccgaac gtatcgccgt ttacgatttg ggtatgctcg acaccttgag
      301 caaactgggc gtgaaaaccg gtttgtccgt cgataaaaac cgcctgccgt atttagagga
      361 atatttcaaa acgacaaaac ctgccggcac tttgttcgag ccggattacg aaacgctcaa
      421 tgcctacaag ccgcagctca tcatcatcgg cagccgcgca gccaaagcgt ttgacaaatt
      481 gaacgaaatc gcgccgacca tcgaaatgac cgccgatacc gccaatctca aagaaagtgc
      541 caaagagcgt atcgacgcgc tggcgcaaat cttcggcaaa caggcggaag cggacaagct
      601 gaaggcggaa atcgacgcgt cttttgaagc cgcgaaaact gccgcacaag gcaaaggcaa
      661 gggtttggtg attttggtca acggcggcaa gatgtccgcc ttcggcccgt cttcacgact
      721 gggcggctgg ctgcacaaag acatcggcgt tcccgctgtt gacgaagcca tcaaagaagg
      781 cagccacggt cagcctatca gctttgaata cctgaaagag aaaaatcccg actggctgtt
      841 tgtccttgac cgcagcgcgg ccatcggcga agagggtcag gcggcgaaag acgtgttgaa
      901 caatccgctg gttgccgaaa caaccgcttg gaaaaaagga caagtcgttt accttgttcc
      961 tgaaacttat ttggcagccg gtggcgcgca agagctgctg aatgcaagca aacaggttgc
     1021 ggatgcgttc aacgccgcga aataatgaaa cggcggcatt cgatgccgtc tgaaacacgg
     1081 atgcaaaccg cctcctgtgt ttcagacggc attgcccgat acggaggctt caaacaaggc
     1141 tttccgctcc gacggttcgg actgccttgt ttgaatcttc tacgccttaa cgcttttccc
     1201 ttctgtttat gactgccaaa cctttttccc tcaacctgac caacctcctg ctgctggcgg
     1261 cgttgtttgc cgtcagcctg tcggtgggcg ttgccgattt ccgctggtct gatgtgtttt
     1321 cactgtccga cagccagcag gttatgctca tcagccgcct gccgcgcacg tttgcgattg
     1381 tgctgacggg cgcgtcgatg gcggtggcgg ggatgattat gcagattttg atgcgcaacc
     1441 gttttgtcga gccttctatg gcgggcgcgg gtcagagtgc ggctttgggt ttgcttctga
     1501 tgtccctgct gctgcctgcc gcgccgctgc cggtcaaaat gtcggttgcc gccgttgccg
     1561 cgttaatcgg gatgttggtg tttatgctgc tgatccgccg cctgccgccg acggcgcaac
     1621 tgatggtgcc gctggtgggg attattttcg gcggcgtggt tgaggcagtg gcgacgtttg
     1681 tcgcgtatga aaacgaaatg ctgcaaatgc tcggcgtgtg gcagcagggc gatttttcga
     1741 gcgtgctgct ggggcggtac gagctgcttt ggattacggg cggtttggcg gtgtttgcct
     1801 atctgattgc cgaccggctg acgattttgg ggctgggcga gacggtcagc gtaaatttgg
     1861 gtttgaaccg gacggcggtg ttgtggtcgg ggctgattat tgtggctttg attacgtcgc
     1921 tggttatcgt tacggtcggc aatattccgt ttgtcgggct ggtcgtgccg aacatcatca
     1981 gccgcctgat aggcgacagg ctgcgccaaa gcctgcctgc ggtggccttg ctgggcgcgt
     2041 ctttggtgct gctgtgcgat attttgggac gcgtgattgt gtttccgttt gaaattccgg
     2101 tatcgaccgt cttcggcgta ttgggtacgg cgttgttttt atggcttttg ttaaggaaac
     2161 ccgcctatgc cgtctgaaaa caaaattgaa tttatgcagg gttcgccgcg cccgttatgg
     2221 gcggcattcg cacttttact gatctgctgc ggactgtttt taacgctcaa cgtcaaaggc
     2281 gattgggatt ttgttttgca cctgcgtctg accaaacttg ccgcgctgct gatggtcgcc
     2341 tatgcggtcg gcgtgtccac ccagcttttc caaacgctga cgaacaatcc gattctgacc
     2401 ccttcgattt tgggtttcga ttcgctgtat gtgtttttgc agaccttgct ggtgtttacg
     2461 ctcggcggcg tgggctatac gtccctgcct gcggtcggca agttcggctt cgaacttgcc
     2521 gtcatgatgg gcggctcgct gctgttgttc tacacgctca tccgtcaggg cggacgcgat
     2581 ttgccgcgta tgattttaat cggcgtgatt ttcgggattt tgttccgcag cctgtcgtcg
     2641 ctgctttcgc gcatgatcga tcccgaagaa tttaccgccg cgcaggcgaa tatgtttgcc
     2701 ggattcaata ccgtccacag cgagcttttg ggcataggcg cgctgatcct gctcgtcagc
     2761 gcggcggtcg tttggcgtga acgctaccgc ttggacgtac accttttggg gcgcgaccaa
     2821 gccgtcaatt tgggcatcag ctacacgcgc aacaccttat ggatactgct ttggattgcc
     2881 gcattggtgg cgacggcgac cgccgtagtc ggcccggtaa gctttttcgg gcttctcgcc
     2941 gcctcgcttg ccaaccactt ttccccgtcc gtgcgccatt ccgtccgcct gccgatgacg
     3001 gtttgtatcg gcggcatcct cctggtcggc ggacagaccg tattcgaaca cttcttgggc
     3061 atgaaggcgg tattaagcgt ggtggtcgaa tttgcgggcg gactcgtttt cctctatctc
     3121 gttttaaaac acaaaaaatg acggatgccg tctgaacggc agcccgcccc gaaaggacaa
     3181 accatatgac gcaagaacgt ttacccgaat ttttcgaccg cgccccgacg ctgaccgtac
     3241 aagacccgct tgccgcattc ctcggcgcgg ccgaaaacgg catcctcact taccgctacg
     3301 ccgatgccgt gcgcctgtgc ggacattcct gcccgaccgt cgcgggcgcg tacctgatgg
     3361 ttatcaaagg tctgaaagcc ctttacggcg aagagctgcc cgaacgcggc ggcatcgaag
     3421 ccgccatgca gggagcgcgc gacgaaggca cggtcggcgt aaccgcatcc gtcgtccaac
     3481 tcctcaccgg cgcagccccc gaaaccggct tcggaggcat cggaatacag ggacgcttcg
     3541 cccgccgcaa cctcttatcc tttggtgcag gcgaaatcaa cggcacactg accctgcgcc
     3601 gcaaagacaa cggcaaaacc gtcgccgtca gcctcaacgc cgccctgcaa ccctttgcac
     3661 ccgaaatgcg cgaacttatg cccaaagccg tcagcggcag cgcaagcgca gaagaactcg
     3721 aacgcttcgg acaactctgg caggcacgcg ttaaagcatt tttaaccgaa tcggcggacg
     3781 acccgcagtt cgtcatcgtc cgcgaagtgt gagcgttcag acggcattcc gaatttcaaa
     3841 tgccgtctga accccgccaa acaacaacaa acctacgccc gacaagcatc cgccatgatt
     3901 accatccgca acgtcagcta ccgcatcggc acacgcccca tcctcgacaa cgtcagcctc
     3961 gacatccccg aaggcggcat taccgccctc gtcggcccca acggtgcggg caaatccacc
     4021 ctgttttcct ttatggcgcg gctgcgaccg cttgaaagcg gcagcatcgc ctaccgaggc
     4081 aaaaatcttg ccgatacccc caccgccgaa ctcgccaaaa ccctgtccat cctcacccaa
     4141 gaaaacagca tcatgagccg catcaccgtg cgcgacctgc tgatgttcgg ccgttacccc
     4201 taccatcaag gcagaccgac tgccgaatgc cgccgtatcg ttaacggtgc aatcgaagaa
     4261 ttccacctgc aagacctctc cgaccgctac ctgaccgagc tttccggcgg ccaacgccaa
     4321 cgcgccatga ttgcgatggt gttctgccaa agcaccgact acgtcctttt ggacgaaccg
     4381 ctgaacaacc tcgatatgta tcacgcccgc tcgctcatgc aaatcctgcg ccggctgacc
     4441 gacgaacaca agcgcaccac cgtcgtcgta ttgcacgaca tcaaccaggc agcagcctac
     4501 gccgaccacg tcgtcgccat gaaaaacggc caagtcgcca tgcagggcaa acccaacgat
     4561 attttcaccg ccgcaaacat caaaacccta ttcgatatgg acgtcgacgt cctcgattac
     4621 gaaggcaaaa aattggttat ccaccatatc taaatccgac aaaaaggccg tctgaacatt
     4681 cagacggcaa cccatatcct gacaaaatta agacacgaca ccggcagaat tgacatcagc
     4741 ataatatgca catattaaca gatattaatg ccgaaccacc taactgcaag aattaaataa
     4801 ataaataaat aaataaataa ataaataaat aaataaataa attgcgacaa tgtattgtat
     4861 atatgcctcc tttcatatat actttaatat gtaaacaaac ttggtgggga taaaatactt
     4921 acaaaagatt tccgccccat tttttatcca ctcacaaagg taatgagcat gaaacacttt
     4981 ccatccaaag tactgaccac agccatcctt gccactttct gtagcggcgc actggcagcc
     5041 acaaacgacg acgatgttaa aaaagctgcc actgtggcca ttgctgctgc ctacaacaat
     5101 ggccaagaaa tcaacggttt caaagctgga gagaccatct acgacattga tgaagacggc
     5161 acaattacca aaaaagacgc aactgcagcc gatgttgaag ccgacgactt taaaggtctg
     5221 ggtctgaaaa aagtcgtgac taacctgacc aaaaccgtca atgaaaacaa acaaaacgtc
     5281 gatgccaaag taaaagctgc agaatctgaa atagaaaagt taacaaccaa gttagcagac
     5341 actgatgccg ctttagcaga tactgatgcc gctctggatg caaccaccaa cgccttgaat
     5401 aaattgggag aaaatataac gacatttgct gaagagacta agacaaatat cgtaaaaatt
     5461 gatgaaaaat tagaagccgt ggctgatacc gtcgacaagc atgccgaagc attcaacgat
     5521 atcgccgatt cattggatga aaccaacact aaggcagacg aagccgtcaa aaccgccaat
     5581 gaagccaaac agacggccga agaaaccaaa caaaacgtcg atgccaaagt aaaagctgca
     5641 gaaactgcag caggcaaagc cgaagctgcc gctggcacag ctaatactgc agccgacaag
     5701 gccgaagctg tcgctgcaaa agttaccgac atcaaagctg atatcgctac gaacaaagat
     5761 aatattgcta aaaaagcaaa cagtgccgac gtgtacacca gagaagagtc tgacagcaaa
     5821 tttgtcagaa ttgatggtct gaacgctact accgaaaaat tggacacacg cttggcttct
     5881 gctgaaaaat ccattgccga tcacgatact cgcctgaacg gtttggataa aacagtgtca
     5941 gacctgcgca aagaaacccg ccaaggcctt gcagaacaag ccgcgctctc cggtctgttc
     6001 caaccttaca acgtgggtcg gttcaatgta acggctgcag tcggcggcta caaatccgaa
     6061 tcggcagtcg ccatcggtac cggcttccgc tttaccgaaa actttgccgc caaagcaggc
     6121 gtggcagtcg gcacttcgtc cggttcttct gcagcctacc atgtcagcgt caattacgag
     6181 tggtaagcag catctcccga taaagaaacc gcagccctgc aaggctgcgg tttttatttt
     6241 ctatccggcc gtcagactgc tgcgtccgca cgttcgcccg tgcggatacg gattgcctcc
     6301 tcgaccggca gcacaaaaat cttgccgtcg ccgatttttc ccgaacgcgc cacctcgaca
     6361 atcacgtcaa tcgcgcgttc cacagcatca tccgccaaca caagctcgat tttgaccttg
     6421 ggcaggaaat cgacagcgta ttccgcgccc cggtaaatct ccgtatgccc cttctgcctg
     6481 ccgaaccctt tgacctcgct gacggtcatg cccgtaatgc cgatttccgt caacgcctcg
     6541 cgcacgtcgt cgagtttgaa cggtttgaca atcgcctcga tttttttcat aaaatttcct
     6601 ttgaacaaac aatacaaaca catccgaaaa acgggaacct cccgtcagat tgtcaacatt
     6661 ttaagccaaa atatccaagc aatacaaacc tgtccggcgt ataatccctc tttttcccaa
     6721 ccgcatttga gagccgaatc catgtctgtc gttttgccct tgcgcggcgt taccgccctt
     6781 tccgatttcc gtgtcgaaaa actcttgcaa aaagccgccg cactcggtct gcccgaagtc
     6841 aaattaagca gcgaattttg gtatttcgtc ggcagcgaga aagcacttga tgccgcgact
     6901 gtcgaaaaac tgcaagcctt gttggcggcg caaagcgttg aacaaacgcc aaaagcgcgc
     6961 gagggcttgc atttgttttt ggtcacgccc cgtttgggta cgatttcgcc gtgggcttcc
     7021 aaggcgacca atatcgcgga aaactgcggt ttggcaggca ttgagcgtat cgaacgcggc
     7081 atggcggtgt ggctggaagg tgcgcttacc gacaggcaaa aacaacaatg ggcagccctg
     7141 ttgcacgacc gcatgaccga aagcgtgttg accgacatcg atgcggcggc gcaactgttc
     7201 caccacatcc aatcggaaac tttctccacc gttgatgttt tgggcggcgg taaagaagct
     7261 ttggtcaaag ccaataccga aatgggcttg gcactctccg ccgacgaaat cgattatctg
     7321 gttgaaaact atcaggcttt gcagcgcaat ccgtccgatg ttgaattgat gatgttcgcg
     7381 caggcaaaca gcgaacactg ccgccacaaa atcttcaacg ccgatttcat cctcaacggc
     7441 gaaaaacaac cgaaatccct cttcggtatg atacgcgaca cgcacaacgc gcatcccgaa
     7501 ggcacggtcg tcgcttataa agacaactcg tccgtaatcg aaggcgcgaa aatcgagcgt
     7561 ttctatccga atgcggcgga aaaccaaggt taccgtttcc acgaagaaga cacgcatatc
     7621 atcatgaaag tggaaacgca caaccacccg accgccatcg cgccgtttgc aggcgcggca
     7681 acaggcgcgg gcggcgaaat ccgcgacgaa ggcgcgacgg gcaaaggttc gcgtccgaaa
     7741 gcaggcttga ccggctttac cgtctccaac ctcaacatcc ccgacctcaa acagccgtgg
     7801 gaacaagact acggcaagcc ggaacacatt tcctcgccgt tggacatcat gattgaaggc
     7861 cccatcggcg gcgcggcgtt caacaacgaa ttcggccgcc ccaacctctt gggctacttc
     7921 cgcacttttg aagagaagtt tgacggtcag gttcgcggct accacaaacc gattatgatt
     7981 gccggcggct tgggcagcat tcaggcgcag caaacacaca aagacgaaat ccccgaaggc
     8041 gcgttgctga tccaactggg cggcccgggt atgcttatcg gcttgggcgg cggcgcggct
     8101 tcttcgatgg ataccggtac aaacgacgct tctttagact tcaactccgt acaacgcggc
     8161 aaccccgaaa tcgaacgccg cgcgcaagaa gtcatcgacc gctgctggca gcttggcgac
     8221 aaaaacccga ttatttccat ccacgacgtc ggcgctggcg gcttgtccaa cgccttcccc
     8281 gaactggtca acgatgccgg acgcggcgcg gtattcaagc tgcgcgaagt gccgttggaa
     8341 gaacacggtt taacgccttt gcaaatctgg tgcaacgaat cgcaagagcg ttatgtcttg
     8401 tcgattttgg aaaaagattt ggatgccttc cgcgccatct gcgaacgcga acgctgcccg
     8461 tttgccgtgg tcggcacggc gaccgacgac ggtcatttga aagtgcgcga cgatttgttc
     8521 tccaacaatc ccgtcgattt gccgctgaac gtcttgctcg gcaaaccgcc caaaaccacg
     8581 cgtaccgaca aaacggttac gccgtccaaa aaaccgtttc acgccgacga tatcgacatc
     8641 accgaagccg cctaccgcgt tttgcgcctg cctgccgtag ccgccaaaaa cttcctgatt
     8701 accatcggcg accgcagcgt cggcggcatg acccaccgcg accaaatggt cggcaaatac
     8761 caaacccccg tagccgactg cgccgttacc atgatgggct tcaataccta tcgcggcgaa
     8821 gcgatgtcta tgggcgaaaa accgaccgtt gccctgtttg acgcgcctgc ttcaggcaga
     8881 atgtgcgtcg gcgaagccat caccaacatc gcggcggtca acatcggcga catcggcaac
     8941 atcaagctct ccgccaactg gatggcggcg tgcggcaacg agggcgaaga cgaaaaactc
     9001 taccgcaccg tcgaagcggt ttccaaagcc tgtcaggcat tggatttgag cattcccgtg
     9061 ggcaaagaca gcctgtcgat gaaaactgtg tggcaggacg gcgaagagaa aaaatccgtc
     9121 gtctcgccat tgagcctgat tatctctgcg ttcgcgccgg tcaaagacgt gcgcaaaacc
     9181 gttacgcccg aattgaaaaa cgtcgaagac agcgtattgt tatttatcga tttgggcttc
     9241 ggcaaagcgc gtatgggcgg ctctgcattc ggtcaggtat acaacaacat gagcggcgac
     9301 gcgcccgatt tggacgatac aagtcgtctg aaagcgtttt acaacgtgat tcaacagctt
     9361 gtcgccgaag acaaactctt ggcataccac gaccgcagcg acggcggttt gtttgccgtt
     9421 ttggtagaaa tggcgtttgc ggggcggtgc ggcttggata tagatttaaa tttattgctt
     9481 gcacaaacat ttattaccaa ccataccgct ctgtctcaat cattgcggac tgaagaggta
     9541 aaagcgttgg ctgaatggca agaaaccatt gcccgcacat tatttaatga agagttgggt
     9601 gctgttatcc aagttagaaa acaagatgtt gccgatatta tcaatttatt ctatcaacaa
     9661 cagctgcatc ataatgtctt tgaaatcggt acgttaactg atgagaacac gttaatcatc
     9721 cgcgacgggc aaacgcacct tatttctgac aacctaatca aactgcaaca aacctggcaa
     9781 gaaaccagcc atcaaatcca acgcctgcgc gacaaccccg cctgcgccga cagcgagttt
     9841 gccctgattg gcgacaacga acgcagcgca ttgtttgccg acgtgaagtt cgacgtgaac
     9901 gaagacatcg ccgcgccgtt tatcaacagc ggcgcgaaac ccaaaatcgc catcctgcgc
     9961 gaacagggcg taaacgggca aatcgaaatg gccgccgcgt tcactcgcgc cggtttcgat
    10021 gcctacgacg tgcatatgtc cgacctgatg gcaggccgct tccgccttgc cgacttcaaa
    10081 atgctggcgg cgtgcggcgg cttcagctac ggcgacgtac tcggcgcggg cgaaggctgg
    10141 gcgaaatcca tcctgttcca ccctgccttg cgcgaccaat ttgccgcctt ctttgccgat
    10201 ccggacacgc tgacattggg cgtgtgcaac ggctgccaga tggtcaacaa cctcgccgag
    10261 attatcccgg gtgcagaggc atggcctaaa ttcaaacgca acctgagcga acagtttgaa
    10321 gcacgcctga gcatggttca cgttccgaaa tcagcgtcgc tgattctgaa cgaaatgcaa
    10381 ggctccagcc tgcctgtcgt ggtcagccac ggcgaaggcc gcgccgactt cgcgcttcac
    10441 ggcggcaata tttccgccga tttgggcatc gcgctgcaat atgtggacgg tcaaaaccag
    10501 gttacccaaa cctatccgct caaccccaac ggctcgccgc aaggcatcgc cggcattacc
    10561 aacgccgacg gccgcgtgac catcatgatg ccccaccccg aacgcgtgta ccgcgccgcg
    10621 caaatgagct ggaaaccgga aggctggacg gaactgtccg gctggtaccg cctctttgcc
    10681 ggcgcacgta aagccttggg ctaaccgccc tactcaaacc aatgccgtct gaagaatatt
    10741 tcagacggcg ttccggcata ccatccttta aacggtatcc gtccaccgag gaacactcat
    10801 gaaaatcacc cccgtcaaag ccctaaccga caactacatc tggatgatac agcacggcaa
    10861 ccatgccgtc tgcgtcgacc cttccgaacc ctcgcccgtc ttagaattcc tcgtccgcaa
    10921 ccgcctcatg cttgcccaaa catgggtaac tcacccccac cccgaccacg agggcggtgc
    10981 ggcggcactc tggcgcggct acatggaatc gcccgtttac ggcgaatccg acatcgaagc
    11041 agcaacccac accgtaaccg ccggcaccca attcaccttc ggcgacggac aggttaccgt
    11101 ttgggcaaca cccggccaca cagaccgcca caccagctac cttctcgaaa cttcagacgg
    11161 catacacgtc ttttgcggcg acaccctttt ttccgccggc tgcggacgcg tgtttaccgg
    11221 cacaatcgaa cagctttacg acagcttcca acgcttcaac cgcctgcctg aaaacaccct
    11281 gttctacccg gcacacgaat acaccgccgc caacctgcgt ttcgccgccc atatcgagcc
    11341 ggacaacgcc gacattcaga cggcactgaa agcggcggcg catacgccta ccctgcccgt
    11401 taccctcgcg cacgaacgcc gcgtcaatcc gtttttgcgc gtcgacctgc cgcacgtcag
    11461 agaccgcgcc gaggcattga gcgggaaaac gttaaacagc agcctcgata cctttgtcgc
    11521 gctgcgtgaa cttaaaaacc aataccggac gaaataaaac aatgggaaaa cgcagccatt
    11581 cctaggattt ttattaaaat cttaaataaa atcatacaat catcgccaat agacgaaagg
    11641 acaccgttgc cttataatca aacaaaaaca aaatatataa tatagtggat tgaatttaaa
    11701 tcaggacaag gcgacgaagc cgcagatagt acggcaaggc gaggcaacgc tgtactggtt
    11761 tttgttaatc cactatattg ttaatccact atataaatcc agcacaaaac gggatcggtg
    11821 attcttgtcc gcaagaatcg ttgattttct ctattacacg gataatcatc atgcgcttca
    11881 cacacaccac cccattttgt tccgtattgt ccaccctcgg tctttttgcc gtttcccctg
    11941 cttactcatc cattgtccgc aacgatgtcg attaccaata ttttcgcgac tttgccgaaa
    12001 ataaaggcgc gttcgccgta ggtgcaagca atatttccat ccaagacaag caaggcaaaa
    12061 tattaggcag ggttctcaac ggcatcccca tgcccgactt ccgcgtcagc aaccggcaaa
    12121 ccgccatcgc caccctgatt cacccccaat acgtcaacag tgtcaaacac aacgtcggct
    12181 acggttccat acaattcggc aacgacaccc aaaatccaga agaacaagcc tatacctacc
    12241 gcctcgtatc acgcaacccg cacccggact acgactacca ccttccccgc ctcaacaaac
    12301 tggttaccga aatctcacct gccgcactca gcagcgtacc cttgcttgga aacggccagc
    12361 caaaggccaa tgcctacctc gataccgacc gcttccccta ctttgtacga ctcggctcag
    12421 gcacgcaaca agtccgcaaa gcagacggca cgcgcacaca aaccgccccg gcataccaat
    12481 acctgaccgg cggcacgccg ctgaaagtat tgggtttcca aaaccacggc ttactcgtcg
    12541 gcggcagcct gaccgaccaa ccccttaaca cctacgcaat cgccggagac agcggttccc
    12601 ccctgtttgc cttcgacaag catgaaaacc gctgggtgct tgcgggcgta ctcagcacct
    12661 acgccggctt cgacagcttc ttcaacaaat acatcgtcac gcaacccgaa ttcatccgtt
    12721 ccaccatccg ccaatacgaa acccggctgg atgtcgggct gaccaccaac gaactcatat
    12781 ggcgcgacaa cggtaatggc gacagcaccc tgcaagggct caacgaacgc atcaccctgc
    12841 ccattgcaaa cccttcgctt gccccacaaa acgacagcag gcacatgccg tctgaagatg
    12901 ccggcaaaac gctcatccta tccagcaggt tcgacaacaa aacactgatg ctggcagaca
    12961 atatcaacca aggcgcaggc gcattgcagt tcgacagcaa cttcaccgtc gtcggtaaaa
    13021 accacacatg gcaaggtgca ggcgttatcg tagccgacgg caaacgcgtc ttctggcaag
    13081 tcagcaaccc caaaggcgac cggctctcca aactgggcgc aggcacgctt atcgccaacg
    13141 gacaaggcat caaccagggc gacatcagca tcggggaagg cactgtcgta ctcgcccaaa
    13201 aagctgcttc agacggcagc aaacaagcat tcaaccaagt cggcatcacc agcggcaggg
    13261 gcacggccgt cctcgccgac agccagcaaa tcaaacccga aaacctctat ttcggcttca
    13321 ggggcggacg gctcgacctc aacggcaaca accttgcctt tacccatatc cgccatgcgg
    13381 acggcggcgc gcaaatcgtc aatcacaacc ctgaccaagc cgcgacactg acgctgaccg
    13441 gcaaccccgt cctcagtccc gagcatgtcg agtgggtgca atggggcaac cgtccgcaag
    13501 gcaacgcggc ggtttacgaa tacatcaacc cgcaccgcaa ccgtcggacc gactacttca
    13561 tactcaaacc cggcggcaac ccgcgcgaat ttttcccgtt aaatatggaa aactcaacaa
    13621 gctggcaatt tatcggcaac aacaggcaac aggccgccaa acaagtcgcc caagccgaaa
    13681 atgcccgccc cgacctaatt accttcggcg gatacttggg tgagaacgcg caaacgggca
    13741 aagccgcacc gagttacagc aaaaccaata tcgaatgggt gaatggtcca aacaccccac
    13801 acaagccctc gccctatacg aatacgccaa cccgcacagg ggcaggcgta ccgacgatta
    13861 ccgcctcaaa gaaggcggca accccggcgc ctacttccca tggaatgcct acagcaccca
    13921 agactgggaa tttctcggac atgaccggcg aagcagccat agaaaaaacc cgccatatcg
    13981 caaatgccgc cgtatacggc cggcccgaat accgttacaa cggcgcactc aacctgcact
    14041 atcgtcccaa acgcaccgac agcacgctgt tgctcaacgg cggcatgaac cttaacgggg
    14101 aagtcttgat tgagggcggc aatatgattg tgtcaggcag gcccgtaccc catgcctacg
    14161 accaccaggc caaacgcgaa cccgttcttg aaaacgaatg gaccgacggc agcttcaagg
    14221 ctgcacggtt caccctgcga aaccatgccc gactgacggc agggcgcaat accgcgcatc
    14281 tggacggcga cataaccgca tacgatctgt ccggcatcga cctcggcttt atccaaggca
    14341 aaacaccgga atgctaccgc tcctaccata gcggcagcac ccactgcaca cccaacgccg
    14401 ttttaaaagc cgaaaactat cgtgcactac ctgcaacgca agtacgcggc gacattaccc
    14461 ttaacgaccg ttcagagctc cgcctgggca aagcacacct gtacggcagc atccgtgccg
    14521 gcaaagacac cgcagtccgc atggaagcag acagcaactg gacactttcc cagtccagcc
    14581 acaccggcgc actgacgctt gacggcgcac aaattaccct gaaccccgat ttcgccaata
    14641 atacacacaa caaccgcttc aacacactga ccgtcaacgg cacacttgac gggttcggca
    14701 cattccgatt cctgaccggc atcgtccgaa aacaaaatgc ccccccctca aactggaagg
    14761 ggacagccgc ggcgcattcc aaatccacgt caaaaacacc ggacaagaac ctcaaacaac
    14821 cgaatcgctt gcacttgtga gcctcaatcc gaaacacagc caccaagccc gattcaccct
    14881 ccaaaacggc tatgccgatt tgggtgccta ccgctacatc ctccgcaaaa acaacaacgg
    14941 atacagcctg tacaacccgc tcaaagaggc cgaacttcaa attgaagcca cgcgtgcgga
    15001 acatgagcgc aaccaacagg catacaacca attacaggca accgacatca gcagacaggt
    15061 tcaacatgac tctgacgcga ccaggcaggc actacaggcc tggcagaaca gtcaaaccga
    15121 acttgcccgc atcgacagcc aagtccaata tctgtccgcc caattgaaac agacagaccc
    15181 gctgaccggc attctgacgc gtgcccaaaa cctgtgtgcc gcacaaggat acagtgtcga
    15241 tatctgccgt caggttgcca aagccgccga cacgaacgac ctgacactct tcgaaaccga
    15301 actggatacg tatatagaac gtgtagaaat ggccgaatcc gaacttgaca aagcacggca
    15361 aggcggcgat gcgcaagccg tcgaaacagc ccggcacgcc tacctgaacg cactcaaccg
    15421 tctgtcccga caaatccaca gtttgaaaac cggcgttgcc ggcatccgta tgccgaacct
    15481 ggccgaactg atcagccggt cggccaacac cgccgtttcc gaacaggccg cctacaatac
    15541 cggccggcaa caggcgggac gccgcatcga ccgccacctt accgatccgc agcagcaaaa
    15601 catctggctg gaaaccggta cgcaacaaac cgactaccat agcggcacac accgtcccta
    15661 ccaacaaact accaactatg cacatatcgg catccaaacc ggcatcaccg accgtctcag
    15721 tgtcggtacg attttaaccg atgagcgcac aaacaaccgt tttgatgaag gcgtatccgc
    15781 ccgaaaccgc agcaacggcg cacatctgtt cgtcaaaggg gaaaacggcg cactctttgc
    15841 cgcggcagat ttaggctaca gcaacagccg tacccgattt accgattatg acggggctgc
    15901 cgtccgccgc cacgcatggg atgcaggcat caacaccggc atcaaaatcg ataccggcat
    15961 caacctcaga ccctatgccg gcatccgtat aaaccgcagc aacggcaacc ggtacgtact
    16021 cgacggcgca gagataaaca gcccggcgca aatccaaacc acatggcatg ccggcatccg
    16081 tctcgataaa accgtcgaac tgggtcaagc caagctgacc cccgctttca gcagcgatta
    16141 ctaccatacc cgccaaaaca gcggttccgc cctcagcgtc aacgaccgta ccttactgca
    16201 gcaagccgcc cacggcacac tgcataccct gcaaatcgac gccggataca aagctggaac
    16261 gccaaacttc atgccgctta cggcaaagac agcaacaccg cccgccacaa acaggcagga
    16321 atcaaaatag gctacaactg gtaacaagcc gataaaaatg ccgtctggaa cccgcgtttc
    16381 agacggcatt tgcgttaaaa atagtaaacc gtttcaaaag ggagtagaat agtgctgttt
    16441 ccaatcccgt gcctgatttt tcgggctttt attatggacc ttcccagttc gtttttactg
    16501 aacacccctt ccgattccaa acgacaataa ccatcccgcc ggaatgcctc cccgcacacg
    16561 gcgggcggag catttatgag catcgaacac actcctccga cacacgacgg cgaaaccggt
    16621 caaaaccatg ccgaacgccc ttccgccgat ttcgaccgtg tccactccct ctgcgaaatc
    16681 ctcgaacctg cttttgaaca aatcgaaaac ggcacaccgc tcgaagatgc gccgctgcgc
    16741 gacaaactga ccgagctgac cgtcctcttg gccgagttgc accctgccga cgtggccgac
    16801 gtcttggagt ccctgccgcc gcgcgaacgc aatatcgttt ggcttctggt caaacccgaa
    16861 gacgacggcg aagtattgct ggaagtatcc gacgcggtgc gagaaacgct gatcgagtca
    16921 atggacaagg acgaattgtt ggcggcggtc gatgatttgg atgcggacga attggcggag
    16981 ctggcagacg atttgccgca ccaagtggtt tatgaagcct tacagacgcg cgatgaggaa
    17041 gagcgcgccc aagtcaaggc ggcaatgtcg tatgaagaca accaagtcgg tgcgattatg
    17101 gacttcgagt tggtcagcat ccgcgccgat gtcgcctgcg aagtggtgct gcgttatctg
    17161 cgccgcttcg acagcctgcc cgaccatacc gacaagattt ttgtcgtcga tgaaaacgac
    17221 gtgctgcagg gcgtgctgcc catccgcaaa cttttggtcg ccgatcccga agatttggtg
    17281 gaaaacgtga tggcgaaaga tgtcgtgcgt ttccgcgccg aggacgacgt ggaagaagcg
    17341 gcgcaggcgt ttgaacgcta cgacttggtt accgcgcccg tcgttgatga aaacaaaaag
    17401 ctcatcggca ggattaccat cgacgagatg gtggacgtga tccgcgaaga atccgaagcg
    17461 gatatgttga acatggcagg tttgcaggaa gaggaagacc tgttcgcccc cgtcttggat
    17521 tccgtcaaaa accgctggat gtggctcgcc gtcaacctct gcaccgcctt cctcgccagc
    17581 cgcgtcatcg gcgcgtttga aggcagtatc gaaaaaatcg tcgcactcgc cgcgctgatg
    17641 cccatcgtcg ccggcatcgg cggtaactcg ggcaaccaga cgattaccat gattgtccgc
    17701 gcgatggcga tggggcagct gacggatatg caggcgggaa ggctgttgaa aaaagaagtc
    17761 ggcgtcgcct tggtcaacgg cattatttgg gggacggtga tgggagcggt ttcgtggctg
    17821 ctttacggca gcctcggcat cggtttggtc atggttgccg cgatgacgct caacctcctg
    17881 ctggcggcaa cggtcggcgt attgattccc gtggtaatgg aaaaattcgg acgcgatccc
    17941 gcgctgggca gctcggtgct gattaccgcc gttaccgact ccggcggctt cctcattttc
    18001 ttgagtctcg ccaccctgtt cctgctttaa atgccgtccc gacccgcgca aaaatgccgt
    18061 ctgaagcaga agctgcttca gacggcattt gaccattcat ccttgttgct caagattatt
    18121 ggacggtatg tcggggcagc cctttggcaa cgccgaccac atcctccccg aacagcgcgt
    18181 tgacatcggt ttcatcaaac acgtatttgc tgtggcagaa gtcgcaatcg acttcgatgc
    18241 tgccttgttc cgccaccacg ccgccgactt cttccccgcc cagcatcaac agcatatcgc
    18301 tgaccttgcc ccgagaacag gtacatgagg attcaaacgt ttccggctcg aacacgcgcg
    18361 gcggcgtttc gtggaacagg cggtataaaa cgtgttgcgc gtccaattct gccagctcct
    18421 ccgccgtcag cgtgcgcgcc agcgtactga cgtgttccca tgcctcttca tccaacacct
    18481 cttcaggcag acgctgcacc agcagcccgc ccgccgcttc atcgcttgca gacagggcga
    18541 tgtgcgtatc aagctgttcg gaacgtttca tatagttcac caacatttgc gcgatgctgc
    18601 cgccttccaa aggcactacg ccctgccagg gttcgccgtc tttgggttgc agggtcaata
    18661 cgaacacgcc gttgccgccc aaaaggtcgc cgaggctttc gtcatcggct atttctgcgg
    18721 tttcgtccca ccgcgcggtt gcacggacgg tacggtcgga agtcgcttcc gcaaccagca
    18781 ttttcagttt tccctgcccc tgaacctgca caatcagcgt gccttcgttt ttaaggttgc
    18841 ccgacagcag aacgccggca gccagtagct ctcccaaggc gcagcggatg gcggcgggat
    18901 agtttttctg ttttacaatg tgctgccaca cgttttccag acggacgtgc agcccgcgca
    18961 cgggcatatc gtcgaagata aagcgggtac gcgcatcggc gcggttgatg gcggtttgat
    19021 tcatgatttt ctctgactga ttgttcggat ggcggctata tggttgcggt cggcgcgaaa
    19081 acaaggcgga cggcggatgc gcttcccaaa ttctcaataa attatataaa aatcaacata
    19141 ttaactcaat ctaacaagcc gttttttgcc aaacagccgt ttttttatat acaatcaaca
    19201 agatattttc gactgataca gcataacatc gcacggcggc acgatgcctc ctgcgcggaa
    19261 acaccgatat ggattctttt ttcaaaccgg cagtttgggc ggttttgtgg ctgatgtttg
    19321 ccgtccgccc cgcccttgcc gacgagttga ccaacctgct cagcagccgc gagcagattc
    19381 tcagacagtt tgccgaagac gaacagcccg ttttacccgt caaccgagcc cccgcccggc
    19441 gggcgggcaa tgccgacgaa ctcatcggca acgcgatggg gcttaacgaa cagcccgttt
    19501 tacccgtcaa ccgagccccc gcccggcggg cgggcaatgc cgacgaactc atcggcagcg
    19561 cgatggggct taacgaacag cccgttttac ccgtcaaccg agcccccgct cggcgggcgg
    19621 gcaatgccga cgaactcatc ggcaacgcga tgggactttt gggtattgcc taccgctacg
    19681 gcggcacatc ggtttctacc ggttttgact gcagcggctt catgcagcac atctttaaac
    19741 gcgccatggg catcaacctg ccgcgcacgt cggcagaaca ggcgcggatg ggtacgccgg
    19801 ttgcccgaag cgaattgcag cccggggata tggtgttttt ccgcacgctc ggcggcagcc
    19861 gcatttccca tgtcggactt tatatcggca acaaccgctt catccacgcg ccgcgcacgg
    19921 ggaaaaatat cgaaatcacc agcctgagcc acaaatattg gagcggcaaa tacgcgttcg
    19981 cccgccgggt caagaaaaac gacccgtccc gctttctgaa ctgatttccc aaggaatacg
    20041 caatgagtat gcccgaaatg cccaaatggt acgacgatga cggacagatc gtgtcctgta
    20101 ccgaaaaggt caaagtgatg tccgaaaata tggccgagct gtatcagacg gcacaagacg
    20161 cgtttgaaga cgcgctgctg atgggttgcg gcgaacgtca gttgcgcgat tacctgctcg
    20221 cgctgattga aggtttggaa aatccctacc gcaaagtctg aacacgcccc ggttgctgcg
    20281 gcacggttta tccgtgccgt ttttgcgttt gtgcgcggct tcggcttttc agacggcata
    20341 tttgacgtta tgattaaaca gttaacaaga tttatcacaa cgccgtcaaa agacagacac
    20401 acaacatgaa catcatccgc gcgctcctca tcatcctcgg ctgcctcgcc accggcgaaa
    20461 ccgccgtttt cctagcaggc atcaaactgc ccggcagcat cgtcggcatg ggcgtgctgt
    20521 ttgcgctttt gcaggcgggt tgggtcaaaa cgtcttggct gcaacagctt accgacgcgc
    20581 tgatggcgaa tctgacgctg tttctcgtgc cgccctgcgt ggcggtcatc agctatttgg
    20641 atttgattgc cgacgattgg ttttcgatac tggtttccgc ctccgccagc actttgtgcg
    20701 tactgctgat tacaggcaag gttcaccgct ggatacggag cattatctga tgaacgaaat
    20761 cctcaggcag cccagcgttc tgcttttcct cacgcttgcc gtgtacgcgc ttgcgattat
    20821 cgtgcgcacg cgcacgggca atatcttctg caaccccgta ctcgtcagca ccgtggtgct
    20881 gattgcctac ctgaaaatcc tcggtatcga ttacgcggtg taccacaacg ccgcgcagtt
    20941 tatcgatttc tggctcaagc ccgccgtcgt cgtgcttgcc gtgccgctct accaaaaccg
    21001 ccgtaaaatc ttcaaccaat ggctgcccgt catcgtttca cagcttgcgg gcagcgttac
    21061 gggcattgtt acggggatgt attttgccaa atggctgggc gcggaacgcg aagtcgtcct
    21121 ctcgctcgcg tccaaatctg ttaccaaccc catcgccatt gaaattaccc gctccatcgg
    21181 cggcattccc gccattaccg ccgccaccgt catcattgcc ggtctagtcg gacagattgc
    21241 cggttacaaa atgctgaaga acacagtcgt catgccctcg tccgtgggta tgtcgctcgg
    21301 cacggcttcg cacgcgatgg ggattgccgc ctcgctcgaa cgcagccgcc gcatggcggc
    21361 atacgcggga ctggggctga cgttcaacgg cgtactgacc gcgctgattg cgccgctgct
    21421 catccccgtt ttgggatttt gaacccgttt cagacggcat ttcagcccat gctgtctgaa
    21481 cgccgacaca ctcgcaagga gaaccgttat ggctgtcaac ctgactgaaa aaaccgccga
    21541 acaactgccc gacatcgacg gcattgccct ctacaccgcc caagcaggcg tgaagaagcc
    21601 cgggcatacc gacctgacac tgattgccgt agccgccggc agcaccgtcg gtgcagtctt
    21661 cacgaccaac cgtttctgtg ccgcgcccgt ccacatcgcc aaatcgcacc ttttcgacga
    21721 agacggcgtg cgcgccctca tcatcaacac gggcaacgcc aacgcgggta cgggcgcaca
    21781 gggcagaatc gatgctttgg cagtgtgtgc cgccgccgcc cggcaaatcg gctgcaaacc
    21841 gaaccaggtg ctgcccttct ccaccggcgt gattctcgaa ccgctgcccg cagacaaaat
    21901 catcgccgcg ctgcccaaaa tgcagcctgc cttctggaac gaagcggcac gcgccatcat
    21961 gaccaccgac accgtgccca aagccgcctc gcgcgaaggc aaggtcggcg acaaacacac
    22021 cgtccgcgcc acgggcatcg ccaaaggctc gggcatgatt catcccaata tggcgaccat
    22081 gctcagtttc atcgccaccg atgccaaagt ttcccaaccc gtcctccaac tgatgacgca
    22141 ggaaatcgcc gacgaaacct tcaacaccat caccgttgac ggcgacacca gcaccaacga
    22201 cagcttcgtc atcatcgcct ccggcaaaaa cagccaaagc gaaatcgaca acatcgccga
    22261 cccgcgttac gcccaactca aagaattgtt gtgcagcctc gcgctcgaac tcgcccaagc
    22321 catcgtccgc gacggcgaag gtgcgaccaa gttcatcacc gtccgcgtcg aaaacgccaa
    22381 aacccgcgac gaagcccgcc aagccgccta cgccgtggca cgttcgccgc tggtcaaaac
    22441 cgcctttttc gcctccgacc ccaacctcgg caggctgctc gccgccatcg gttatgccgg
    22501 cgttgtcgac ctcgatactg acctcgtgga aatgtatctc gacgatattt tggttgccga
    22561 acacggcgga cgcgccgcaa gctacaccga agcacaaggg caggcggtga tgtcgaaggc
    22621 cgaaatcacc gtccgcatca agctgcatcg cggacaagcc gccgccaccg tctatacctg
    22681 cgacctgtcg cacggatacg tttccatcaa cgccgactac cgttcctgac ccgacacggc
    22741 ttcagacggc atacataaaa tgccgtctga accgccggac aacataccat gacctccaca
    22801 ttcccccgcc gcctcgcccg caaaatccgc caaacccgcc gcctgtcgcg caaaagcatc
    22861 gcctttctgt tccttttggc aggttcggca ctcgtcgccc tgaccgcgct gttttttgcc
    22921 catcttgccg attttgcgct ggaactgaac gccaaactgg ttcaacaata cccgtggttc
    22981 gcgtgggtcg cgcttccttt gggtttgccg cttattgcgt ggctcacacg caaattcgcc
    23041 cccttcaccg ccggcagcgg catcccgcag gtcatcgcct cactgtcgct gccctacggc
    23101 gcacagaaaa cgcggctgat ccgcctcggg cagacgctgc tgaagattcc gctgaccttt
    23161 ttgggtatgc tgttcggcgc gtccatcgga cgcgaaggtc cgtccgtgca ggtcggcgcg
    23221 gcagtgatgg gcgcgtgggg cgcgtggtgc aagaaacacg gcttggcatt caaagggatg
    23281 caggaaaacg atttgatggc ggcgggcgcg gcgggcggtt tggcagccgc gttcaacgcg
    23341 ccgctggcgg gcgtgatttt cgccattgag gaactcgggc gcggcatcat gttgcgctgg
    23401 gagaggcaaa ttcttttggg cgtgctcgcc tccggtttca tacaggtcgc cattcagggc
    23461 aacaacccgt atttttccgg cttcaacggc ggcgtattgg aacatatctt tctgtgggtc
    23521 gcactgtccg gcctggtttg cggcgcggcg ggcgggctgt tcggacgttt gctctatcgc
    23581 ggtgcggcgg cgtttgcacc gcgcaagata cgcggcttca tccgcaaccg tccgctgctg
    23641 ctggcggcac tgatggggct gctgctcgcc ctgctcggca cgttctacca aggcaaaacc
    23701 tacggcaccg gctaccacga agccgcccaa gccctgcacg gcatctacga agcccccttc
    23761 ggactcgccg ccgccaaatg gctcgccacc gtattcagct attgggcagg cgttccgggc
    23821 ggcattttca ctccctcgct gaccataggc gcggttttgg gcgagcatat cgccgccatc
    23881 gccgacatat cgcagggtgc aaacatcatc gtcctcatct gcatggcggc atttctggcg
    23941 ggcgcgacac aatccccgat tacttccgcc gtcgtcgtca tggaaatgac gggcggacaa
    24001 agcctgctgt tttggatgct aattgcctgc attttcgcct cgcaggtttc gcgccagttt
    24061 tcgccgcgtc cgttctacca cgcatcggga atgcgcttcc gccagcgcgt gcttcaggaa
    24121 accaccgccc aaaccggcaa tgcgcccgca agaccgcaaa cagcaaacag caaaacggga
    24181 atgccgtctg aaaattaaaa cgcccccgat caaacgccgg cagccgcctt gatttgaata
    24241 ccgttcctcc gccgcttgaa atttcagcaa caatgccgtc tgaacgacag aatgcggttt
    24301 tcagacggca tttccccatc ccgatattgc ccgaacccaa ccaaagcgtt tgctataatt
    24361 ctattttttt accgcacacg caccaatcat gtttcccgat ttctcccaaa ccctctccaa
    24421 agaccgccac ttcctgcaat ccgccttcaa aaatcccaac aaatacggcg gcttgtccaa
    24481 agtcgaagaa aaataccgaa aatcgcacga aatctttttg aaacgtttgg ccgccttgcc
    24541 caaacccgaa ttcgacaaca ccctgcccgt tcacgagaaa cttgacgaaa tcaaaaaagc
    24601 cattgccgag catcaggtaa cgattatttg cggcgaaacc ggttcgggca aaaccacgca
    24661 gctgcccaag atttgtttag aactcgggcg tggggcggcg gggctgatcg ggcataccca
    24721 gccgcgccgt ttggccgcgc gctccgtggc agagcggatt gccgaagagc tgaaatccga
    24781 aatcggcagc gcggtcggct ataaagtacg cttcaccgac cacacctcgc gcgatgcctg
    24841 cgtcaagctg atgaccgacg gcatcctgct ggcggaaacg cagaccgacc gttatctcgc
    24901 cgcctacgac acgattatca ttgacgaagc gcacgagcgc agcctgaaca tcgacttcct
    24961 tttgggctat ttgaaacaac tgctgccgcg ccgccccgat ttgaaagtca tcatcacctc
    25021 ggcaaccata gacgcagaac gcttctccca acacttcaac ggcgcgcccg tgctggaagt
    25081 gagcggacgc acctatcccg tcgaaatcct ctaccgaccg ctgaccggca aagacgaaga
    25141 cgatgcagaa gtcgagctga ccgacgcgat tgtcgatgca gccgacgaat tggcgcgaca
    25201 cggcgaaggc gatatcttgg tattcctgcc gggcgagcgc gaaatccgcg aagccgccga
    25261 agccctgcgc aaatccacgc tacgccgcaa cgacgaaatc ctgcccctgt tcgcacgcct
    25321 gtcgcacgcc gagcagcaca aaatcttcca cccctcaggc gcgaaacgcc gcatcgtgct
    25381 ggcaaccaac gtcgccgaaa cctcgcttac cgtgccgggc atcaaatacg tcatcgacac
    25441 cggcctcgca cgcgtcaaac gctattccgc acgggcgaaa gtggagcagc ttcatatcga
    25501 aaaaatctcc caagccgccg cccgccaacg ctccggccgc tgcggacgcg tctccgcagg
    25561 cgtatgtatc cgattgtttt cagaagaaga tttcaacaac cgccccgaat ttaccgaccc
    25621 cgaaatcgcc cgcagcaacc tcgccgccgt catcctgcgc atggcatcgc tgaaactcgg
    25681 cgacgtagcg gcattcccat ttttagaaat gcccgattcg cggtatatta atgatgggtt
    25741 tcaggtgttg ctggaattag gggcagtgga ggccgcctga aaacaagtag gatatacact
    25801 tctacctgac aaagaccaac aaacgataaa actacggcac atctagatgc ccaacctaca
    25861 acattgcaca cggtaaaaac atgaaacact tactcatcga ttttgaaaac gtccagccgc
    25921 aaaacttaga caaattacta accgaaaata cccatatttg gctatttata ggtgtattac
    25981 acaaaatgtt acctattagt ctggtgcaat ccctactacg tttcggcgaa cgtgtccatc
    26041 ttgtccagtt acaaaaaacg gggaaaaacg cattggattt ttacctgtcc tattacctcg
    26101 gacaaattac cgccacagac cccaatgccc aaatcggcat actctcgcgt gatggaggat
    26161 acgatgttct ggtcgaacat attttgaaaa accaccaggc gaagggtatc gtgcgcctag
    26221 ccaatataga tgaagtacaa catcagaaaa ttgctaccga accgccgtca gcattgcggg
    26281 aaaacactcc tcagcctgaa accaccctca aaccacagca accattaact tcctatttcc
    26341 aagcagccct aactgcactg cgccgccccg acgctttccg cccctgccgc ctgcataacc
    26401 tgcgacaaaa tctgcgtaag catattttga gtgatttgtt taaagaaaaa accgatgaag
    26461 aatgcgaaat aaccactgct aacgttatca ataaactcaa agcacaaaac ttcatcagca
    26521 ttgatgaaca ggaaaccgtt tcctaccatc tcagtgataa tgatttgtta caaagaatcc
    26581 aacgccatat tttaagccaa cgtcccaaaa cctacgctga ttttcaagcc gtcgtgcaaa
    26641 accgagcaga tgcacttcac ttaacagtcg gtaccaacga cattcaatcc tttgcgcgac
    26701 atttgcgcga ccaaaacctg atccgccaaa acaatgggaa aattgaatat gcaccgttta
    26761 ctgaacctaa accacagcca acacccaagc agcctaaaaa aaccgcatgg gaacctgatg
    26821 aaattatttg gaaaaaagtg attgccgcgt tatcgttaaa gaaccgtcct aataaaacca
    26881 aaactttacg caatacaatc caggcactca caaaatccaa tgcacaagaa actgacaaac
    26941 tgctacaaca tttacaagat acccaagtcc tacgtattga cggtactaaa attgtgtata
    27001 tcaagtagga tgggcattta tgcctgacct acaaaaccaa aaacaaccta ccacccttaa
    27061 tcaactccac aaaccctctt cagacaacct cgttttttga aaaacaatct gtaaacagat
    27121 aactgctgaa gaataccgtt gccgagcccc aaaacctgcc tgcaactttt attgtgaact
    27181 tcccattatg aaaaaatccc ttttcgttct ctttctgtat tcgtccctac ttactgccag
    27241 cgaaattgct tatcgctttg tattcggaat tgaaacctta ccggctgcaa aaatggcaga
    27301 aacgtttgcg ctgacatttg tgattgctgc gctgtatctg tttgcgcgtt ataaaacttc
    27361 gcggctgctg attgcgctgt ttttcgcgtt cagcattatt gccaacaatg tacattatgc
    27421 ggtttatcaa agttggatga cgggtattaa ctattggctg atgctgaaag aggttaccga
    27481 agtcggcagt gcgggcgcgt cgatgttgga taagttgtgg ctgcctgcgt tgtggggcgt
    27541 ggcggaagtc gtgctgtttt gtagccttgc caagttccgc cataagacgc atttttctgc
    27601 cgatatattg tttgccttcc taatgctgat gattttcgtg cgttcgttcg acacgaaaca
    27661 agagcacggt atttcgccca aaccgacata cagccgcatc aaagccaatt atttcagctt
    27721 cggttatttt gtcggacgcg tgttgccgta tcagttgttt gatttaagca agattcctgt
    27781 gttcaaacag cctgctccaa gcagaatcgg gcaaggcagt attcaaaata tcgtcctgat
    27841 tatgggcgaa agcgaaagcg cggcgcattt gaaattgttt ggctacgggc gcgaaacttc
    27901 gccgttttta acccggcttt cgcaagccga ttttaagccg attgtgaaac aaagttattc
    27961 cgcaggcttt atgacggcag tatccctgcc cagtttcttt aacgtcatac cgcatgccaa
    28021 cggcttggaa caaatcagcg gcggcgatac caatatgttc cgcctcgcca aagagcaggg
    28081 ctatgagacg tatttttaca gtgctcaggc tgaaaaccaa atggcaattt tgaacttaat
    28141 cggtaagaaa tggatagacc atctgattca accgacgcag cttggctacg gcaacggcga
    28201 caatatgccc gatgagaagc tgctgccgct gttcgacaaa atcaatttgc agcagggcag
    28261 gcattttatc gtgttgcacc aacgcggttc gcacgcccca tacggcgcat tgttgcagcc
    28321 tcaagataaa gtattcggcg aagccgatat tgtggataag tacgacaaca ccatccacaa
    28381 aaccgaccaa atgattcaaa cagtattcga gcagctgcaa aagcagcctg acggcaactg
    28441 gctgtttgcc tatacctccg atcatggcca gtatgttcgc caagatatct acaatcaagg
    28501 cacggtgcag cccgacagct atctcgtgcc gctggtgttg tacagcccgg ataaggccgt
    28561 gcaacaggct gccaaccagg cttttgcacc ttgcgagatt gccttccatc agcagctttc
    28621 aacgttcctg attcacacgt tgggctacga tatgccggtt tcaggttgtc gcgaaggctc
    28681 ggtaacgggc aacctgatta cgggtgatgc aggcagcttg agcattcgcg atggcaaggc
    28741 ggaatatgtt tatccgcaat aagcgacgtg aaaaccaata aaaacaaatt tagatgatgt
    28801 cggggaagat gcccgaccga caagactatg caaaatatga aaaaccaagt acgcggatca
    28861 ggcatggatg cccgatccaa tccggccaat gtttcagacg gcctgcaaaa cagttcgggt
    28921 catatcggta ccaacacgcg ctaccgcctg accaaactcg gcgaacaaat ggcgcgcctg
    28981 cccatcgacc cgaaaatcgc gcgcattttg ctggcggcga agaaacacga ctgcatggcg
    29041 gaaatattgg tgatagcgtc cgcgctgtcg attcaagacc cgcgcgagcg gccgttggaa
    29101 gcgcgcgatg ccgccgccaa ggcacacgag cgttttaccg acaagcaatc cgacttcctt
    29161 gcctatctga acatttggga cagcttccag cgcgagcgcg acaaaggttt gtccaacaag
    29221 cagttggtgc aatggtgccg tcaatatttc ctgtcgcacc tgaggatgcg cgagtggcgc
    29281 gagctgcacc accagcttgc ccaaaccgcg attgaaatgg gtttgaccac caaggaagtc
    29341 gctttcagac gacctcccga aatcaggcag ctcacgtcgt ctgaaaacca aggcgaccaa
    29401 gacctatccg ccaaactcaa gcaaaaacaa ctggataaaa agcaacaccg cgcccaaatc
    29461 cgcgccgcca aagaagcggg ctacgaacaa atccaccgcg ccctgctcac tggccttatc
    29521 gccaacgtcg gcatgaaatc gcccgacggc aacgactaca ccggcgcgcg cggcagccgc
    29581 ttccaccttt tccccgcctc cgccctgttc aaagccaagc ccaaatgggt gatggcggca
    29641 gaattggttg aaaccacgcg cctttacgcg cgcgacgtcg ccgttatcca gcccgaatgg
    29701 atagagcagg aagcgccgca cctcgtccgc tatcattatt tcgagccgca ttgggaacaa
    29761 aaacgcggcg aagtcgtcgc cagcgaacgc gtgacgcttt acggtctgac cgtattgccg
    29821 cgccgccccg tgtcttacgg caaagttgcc cccgaagaag cgcgcgaaat ctttatccgc
    29881 agcgcgttgg tggcgcagga atgcgatttg aaagcggatt tttttgtcca caacaaaaag
    29941 ctgattaaag aaattaccga actcgaacac aaatcgcgca agcaagacgt gctggtcgat
    30001 gacgaagccc tgtttgcgtt ttataacgaa cgactgcccg aaatggcttg gaaagacgcg
    30061 caaggcagcg tttggggaag tgaagattcc gtacggatta ttgaatctga caaagccgag
    30121 aggtcgtctg aaaatgagcg caacgagttt cgtaaaaaca agcgtaatgg gtctcgccaa
    30181 aatgaaaatc acggcaacac cgtaggttgg gttgaaaacc caacatcagc cgcaactgca
    30241 aaaactgttg ggtttgacaa cccaacctac gctactcagc aacccacccc ctcccccgag
    30301 agggagggtc ggggagaggg caaaacagtt gccgcacaaa ccaacttttc cgcaaccgca
    30361 gcaaaccctc tcccgcagga gagggaacag agtgcctcag cttcaacgtt ttcagacgac
    30421 ctgcgtcctg caaatctgca gcaaaccgcc ccctcccccg tgggggaggg ctggggagag
    30481 agcaaaacag ttgccaccca aaccaacttt tccgcaacct caacactttc agacgacccc
    30541 aaacccaaaa agcagcctgc acctcaaaaa ggccgtctga aacctttgcc ccttgccgat
    30601 atccgcacct ttgaagcctg gctcaaaact gccgagcgca acaatccgcg cctgctgttc
    30661 ctcagccgcg acgatttgat gcaacacgcc gccgtgcaca ttaccgaaga gcagttcccc
    30721 aaattctggc aaaccgcaga cggcaagttc aaactttcct accgcttcga gccacaccat
    30781 ccgcttgacg gcgtgaccat gaccgtgccg ctgaccgtcc tcaaccgcct gcacgcgcca
    30841 tcgctcgaat ggctggtgcc cggtatgttg cgcgaaaaaa tccagctgct gattaaagca
    30901 ctgccgaagc aaatccgccg catttgtgtg cccgtacccg atttcatcac caaattcctc
    30961 gaaagcaatc ccgaccgcca agcgaccatc attccccagt tggcgcactt tatcgccaaa
    31021 agcgccagcg atatgcggat tctcgagcaa atcgaccaag acgcatgggc ggcgcaagaa
    31081 ttgcccgaac actgctatct gaatctgcgc attatcgacg acggcggaca agagcttgcc
    31141 ggcggccgca aactgcacga attgcaacaa cagctcggcc aagccgccgc cgtcaccttc
    31201 cgcgacaaca cccaagaatt cgagcgcgac aacgttacca catgggacat cggaaccctg
    31261 cccgaatcca tcaaattcgc ccgcggcaaa caacagctca ccggctacct cggcctgcaa
    31321 aaagaaaaag acggccgcat cgccctgcgc ctgtttgaca ccaccgaagc cgccgaacag
    31381 gcacaccgtc aaggcgtcat cgaattgatg aagctgcaat taaaagagca ggtaaaagac
    31441 ctgaacaaag gcatccaagg cttcacccaa gccgccatgc tgctcaaaca catcaacgcc
    31501 gacaccctgc gcgacgacct cacccaagcc gtctgcgacc gcgcctttat cggcgaagac
    31561 gagctgccgc gcaacgaaaa agccttcaaa gaacaaatca aacgcgcccg tagccgcctg
    31621 cccgccgtca aagaagccct cagccgctac ctgcaggaaa ccgcagccgc ctacgccgaa
    31681 ctcaacggca aactcggcaa acatccattg acccacctcc taagactacg cctgcaaacc
    31741 ctgcttgccc ccggcttcgc cacccgcacc ccgtgggcac aatggccgcg cctccccatc
    31801 tacctcaaag ccatgaccct gcgcctcgaa aaatacagca gcaaccccgc ccgcgacgca
    31861 gcccgcgaag ccgatataca ggaattggaa caaatgtggc aggaaaaaaa cgacggtttg
    31921 gtgaaacaag gtctccccat ttcagacggc ctcgccgcgt ttaaatggat gattgaagaa
    31981 ttgagggtgt cgctgttcgc gcaggaattg aagacgcctt atccggtgtc ggtgaagcgg
    32041 ttgatgaagg agtgggagag gttgaataag tagtgatatt atccaataca tttacaggaa
    32101 aatttctaac ttacataaaa ggtacaactc aatgaaaagc gaaaataatt atgaacgtat
    32161 tgttcaaaat tctaaaaaat tccaacactc tcagaagaat gagatgcaga aacgcataac
    32221 agatttgctg caacaactca caaatggcat tcatgaacgc gaccaaatta tggcggtttc
    32281 cctacttggt gcgattgccg gacataatac tttcctattt ggaccgccgg gaaccgcgaa
    32341 aagtctgatt tcccgccgtt tggcatgtgc atttgaaaat ccgcaatact ttgaatactt
    32401 gatgaaccgt ttcagcacac ctgaagaagt attcggacct gtatctatta aggcattgaa
    32461 agaagaccga tatctccgaa aaatcgaagg ctatttgcca actgccgatt ttgcattttt
    32521 ggatgaaatt tggaaatcca gtcctgcaat tttgaataac ctgctgacca ttatcaacga
    32581 gcatattttt aaaaacggcg atgagaggtt taatgtgcca cttaaagccc tgattgcggc
    32641 ttccaacgaa attccacctg aaaatcaagg tttagaggca ctgtatgacc gctttattat
    32701 ccgtctgctt gtgccgccga ttgaacaaga agagaacttc aaccgtttgc tggatagcaa
    32761 gccaagcagc gacaaacctg aaatcagtga agatttacgg attagttatc atgagcttgc
    32821 caaatggcgt gaacaactcc acaaagtcag gctaagtaca gatacattac tgattattaa
    32881 gtatatcaga gaagaattag cagcccagtt tgataagtta ggcgtttatg tatccgaccg
    32941 acgttggcaa cgtgcagccg tattattaaa ggcttctgct ttttgcaatg gacgcaaaga
    33001 aaccaatcat agcgatgtga tcttgctgaa atattgtctg tggacaacac ctgaaaatcg
    33061 agagtcagtg gaacaaattg tgatgaatgc cattaaatcc tgtgggtttg atacaggtat
    33121 tgatctggct gaattagata gagaaaaaga gagtttggat aaggaaataa ataaggaact
    33181 ttatcattca caagatgttt atgagacggt tgaaatgagt ggaaaaaaat attttccagt
    33241 acaggctgtt ttcaaaaacg tacataatag tcatgctaat aaagaactta agatttatgt
    33301 tccatatagc aaatttcgta gtaaagaaaa attttatcca atagatagta caggaaatga
    33361 aattcaagaa attgaatgtg aatttgatgg gcaaggttgc tgtaaattgg aattgaaagt
    33421 gcggggtggt cactggaatg agcaatataa gccattaaaa tttaaaccca atatcttatt
    33481 tcacaaagga gataaaaaat cagatgttaa cgaacgtcta attcattcac taacccaatc
    33541 tatatctgat attcgcaaac aattgattga tacacagaaa caagttgaga aaaaatacga
    33601 aaaataccag cagtacctgc aaagcccctt tgttgcccaa gcagatattg atgttgctat
    33661 atcaggtatt ctagaccaaa tcgataaact caatttgcgg attaaagact gcgaacgttt
    33721 ggagtcttta tgtcgttaaa cagaaaatta tccgaacaaa taagatggat taaagcttct
    33781 ctacaaatag attatgcaga tttatttaaa cagcatggtt cgttaaatgg acagattcag
    33841 caacgtttat cagattggca atatcaggcc aaactggctt tgttgcagaa aaacccattt
    33901 atattacatg aagaaaagct aaaaaaacac caacaaacag aaatttttaa tcaacagtct
    33961 gttgatgatt atcggtattt ttgcaaatta gcaggcgtgc catttgaaaa agaattctgg
    34021 cagcaggaat taacacaaag caaaaattca aaacccaata aacagaattt gcctttgaaa
    34081 ttgctaacag gaaaatggca gcagcaatta gactatgcca aatctcaatg gtatttaaag
    34141 caacttaatc aattacgaca ggaatttata gataagttaa aacaggaact cgacactatc
    34201 cgacagcttg cagaacagtt agagcaattt ggttttgaag cagggctgtg gtttgataac
    34261 agtatcggca atttaagcca gcaaaatatt gaagaaatga aacgctggct gaattacttg
    34321 acccaagata agaatgccca acagattgct gaattactag gcaaaatgcg ccaaatcgaa
    34381 caatctgaaa aaatcgaaca ggtaaaacag actgtttaca caaaaagccc acaaattgat
    34441 gtgaattcgc gtgaagaaat tatcggatta cgtttaggta aagatttaga gtatgtattg
    34501 ccgtctgaat tggctttaat ggcagatgaa gaaacatcga ctttatttga tttgaagttt
    34561 ttggaatcca aattaatgtg ttttgaattg caaggaatga cctattgcga tgccccaact
    34621 gaaattatag ttgaacaaaa aagccaagag gatgaaaagc tcggaccaat gattttatgt
    34681 gtagatacca gtggttcaat ggttggtcta cctgaaaata ttgccaaagc aatggcttta
    34741 tttttaggag caaaagctaa aagcgaaaac cgttcttgtt ttgttatcaa tttttccact
    34801 ggaatagaaa cttttgaatt aacaagtaaa acagggattt ccaatttgat tgctttttta
    34861 cgtcaatcct ttcatggtgg tacagatgct gccccagctt tacgtcatgc gctaaaaatg
    34921 atggagcaag aaatctatca aaaggcagac ttattaatga tttccgattt tgtgatgaac
    34981 agcttacctg atgatttgtt ggcatcaatc gaaatacaac gagaaaccgg taatcagttt
    35041 aattctttgg ttattggtga tgcttttatg agtaaacgcc taaaaacaca ttttgatcgt
    35101 gagtggatat acaatcctaa tgttcagaca attcaagaat tagtacagtt caagaaagat
    35161 attttcaata aacaagttgt caactcataa cactatccta ctcatatgta tttttggaag
    35221 ataccaccct atacaacttg gaatccatac gcagaatatg tgtggacttt ctaaactact
    35281 cccctttcca ccctaaaaaa ggtcgtctga aacccatttt cagacgacct ttttccactt
    35341 cgcaaaacaa gaattcccac ccctctcccc aaacgtcgcc cgaaccagta aactccccat
    35401 atttcaacaa cttcttggaa gccaaccatg ccccgtatcc accctcctca cctgttcccg
    35461 ccccatatcg ccgaacgcgg ccttttgtat tttcagcagg gcaaggttcg cgatgtccga
    35521 aaaacttccg ccgggcgtta tcgggcctgg cgccgtttgc tgccggcggt ctgaataatg
    35581 gtggcgtcaa cgacggcagc ggatgctttc tctactttta ggtttttttc ggtcagttgg
    35641 cggttaatca gtttgagcaa ttcggacagg gtgtcgtctt gcgccagcca gttgcggtaa
    35701 cggcataagg tgctgtaatc ggggatgctc agttcgtcaa agcggcaaaa caggttgaag
    35761 tcgatgcggg tgatgaggct gtg
//
LOCUS       DAWGBY010000008        33227 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.008, whole genome shotgun sequence.
ACCESSION   DAWGBY010000008 DAWGBY010000000
VERSION     DAWGBY010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 33227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33227
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.008"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(68..814)
                     /locus_tag="WHG62_000359"
     CDS             complement(68..814)
                     /locus_tag="WHG62_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ1724527.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(993..1664)
                     /locus_tag="WHG62_000360"
     CDS             complement(993..1664)
                     /locus_tag="WHG62_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ1724528.1"
                     /translation="MQIKKIMKWFPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WHG62_000361"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WHG62_000361"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ1724529.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFICIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /locus_tag="WHG62_000362"
     CDS             complement(2481..2963)
                     /locus_tag="WHG62_000362"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ1724530.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /locus_tag="WHG62_000363"
     CDS             complement(2995..3684)
                     /locus_tag="WHG62_000363"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ1724531.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFER
                     HEGVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLEIGLASAD
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIRPLLVQGDARNLKLTQPQD
                     AYIVRLLLDAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WHG62_000364"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WHG62_000364"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ1724532.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGEAEEEEPAAKPVASAEMKLGAKLKVIKADEAELAAHG
                     QYLDGLGEACIWRKEAVPSENGGADA"
     gene            complement(4571..5881)
                     /locus_tag="WHG62_000365"
     CDS             complement(4571..5881)
                     /locus_tag="WHG62_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1724533.1"
                     /translation="MKVEQGVRGLCKSRRFVPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLSEMVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WHG62_000366"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WHG62_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ1724534.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLLEKKEEKDEG"
     gene            complement(6056..6355)
                     /locus_tag="WHG62_000367"
     CDS             complement(6056..6355)
                     /locus_tag="WHG62_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724535.1"
                     /translation="MHYFSIHDQSGQHIGFFILLADDESEARPQSGRFAVKLEDGAGN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLAVSGQTFVLNDLTGNM"
     gene            6706..7902
                     /locus_tag="WHG62_000368"
     CDS             6706..7902
                     /locus_tag="WHG62_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ1724536.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            complement(8312..10153)
                     /locus_tag="WHG62_000369"
     CDS             complement(8312..10153)
                     /locus_tag="WHG62_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ1724537.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            10244..10714
                     /locus_tag="WHG62_000370"
     CDS             10244..10714
                     /locus_tag="WHG62_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ1724538.1"
                     /translation="MYDVNTHDVRRFFAHVWQQRLNPLQLSALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAENQARLNPHEIA"
     gene            complement(10786..11598)
                     /gene="hpnC"
                     /locus_tag="WHG62_000371"
     CDS             complement(10786..11598)
                     /gene="hpnC"
                     /locus_tag="WHG62_000371"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ1724539.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKKALWK"
     gene            complement(11685..12167)
                     /locus_tag="WHG62_000372"
     CDS             complement(11685..12167)
                     /locus_tag="WHG62_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ1724540.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            12640..12891
                     /locus_tag="WHG62_000373"
     CDS             12640..12891
                     /locus_tag="WHG62_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724541.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPAAEAPAAEAPATEAPAA
                     EAPAAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAAK"
     gene            13001..14368
                     /locus_tag="WHG62_000374"
     CDS             13001..14368
                     /locus_tag="WHG62_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ1724542.1"
                     /translation="MPDLHTEFSRLLPTDEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGERVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWTLRENISASQRKLGTSIKHD
                     IAVPIGHVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPDILSNEAYRYED
                     DINSTVYRNVLACNGTVAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(14549..16276)
                     /locus_tag="WHG62_000375"
     CDS             complement(14549..16276)
                     /locus_tag="WHG62_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEZ1724543.1"
                     /translation="MKKITTFSPLGYFYSDDGYGGSWLYEFYKNNIFNSYATVKHSNI
                     NSEILAVGNVADLYYKHYIRSPIALYADWSTFSLPLPRLKVSENSHVIGQIIHLYRVD
                     LESSLWEPRWDSDVSYLNLDNSSIRFNTKNESLVVGESRIRPTPDDALFNEKYLKREF
                     GDYTGYRSNHNSRILFAYDLSEREADKPVLTLKSKVTGKTAIVFEEKALNNLKNLTYR
                     QLIKTETDVKPNAFYLLEEYKKGRYRLFLRQCPNGFCIGVEKLAIPTHLVASYAQQAQ
                     AANTLFALRLNDKNSDIFDRTLPRKGLWLRVIDGHSNQWVQGKTAPVEGYRKGVQLGG
                     EVFTWQNESNQLSIGLMGGQAEQRSTFRNPDTDNLTTGNVKGFGAGVYATWHQLQDKQ
                     TGAYADSWVQYQRFRHRINTEDGTERFTSKGITASIEAGYNALLAEHVTKKGNSLRVY
                     LQPQAQLTYLGVNGKFSDSENAHVNLLGSRQLQSRVGVQAKAQFSLYKNIAIEPFAAV
                     NALYHNKPFGVEMDGERRVINNKTAIESQLGVAVKIKSHLTLQASFNRQTGKHHQAKQ
                     GALNLQWTF"
     gene            complement(16246..16635)
                     /locus_tag="WHG62_000376"
     CDS             complement(16246..16635)
                     /locus_tag="WHG62_000376"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724544.1"
                     /translation="MAVDYVYDKTKLTDDEIIRLKKLRDRNSEYWKDDLFRLDVPKET
                     GLRHDIEGAATGNFSYPIFYIPIDDKPIDPDKKISFFDSPYTPSYTAAFVQGFGVKER
                     NGDTEEQAKQFIDKFRTRLKKLLHSLR"
     gene            complement(17099..17545)
                     /gene="smpB"
                     /locus_tag="WHG62_000377"
     CDS             complement(17099..17545)
                     /gene="smpB"
                     /locus_tag="WHG62_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ1724545.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(17600..18610)
                     /gene="waaF"
                     /locus_tag="WHG62_000378"
     CDS             complement(17600..18610)
                     /gene="waaF"
                     /locus_tag="WHG62_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ1724546.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLDIGKPVLAFCPGAEFGPAKRWPTRYFAELGKHYSAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            complement(18741..18816)
                     /locus_tag="WHG62_000379"
     tRNA            complement(18741..18816)
                     /locus_tag="WHG62_000379"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18781..18783),aa:Asn,seq:gtt)
     gene            complement(19007..19759)
                     /locus_tag="WHG62_000380"
     CDS             complement(19007..19759)
                     /locus_tag="WHG62_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ1724547.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETQVFECEVMPYPNLTEHEAKQF
                     ERDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            20070..20837
                     /locus_tag="WHG62_000381"
     CDS             20070..20837
                     /locus_tag="WHG62_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ1724548.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGGNASPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHRVVADIPADVHRRN
                     ATSLQLSRCANIADRTGLDALGGRRHSRRCPPPQRGLAAIKPLRQHRRRPVRSHIGGN
                     QFADLPHQVDAFVHGKTDAVMLQPRQHAAKRDLRRIVRHFFIRQHRRRIIKRRAHPPG
                     VRQLHRIAHCLRRPVLCGKPFYGFLFESNPLRLIEAV"
     gene            21052..21162
                     /locus_tag="WHG62_000382"
                     /pseudo
     CDS             21052..21162
                     /locus_tag="WHG62_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(21491..21652)
                     /locus_tag="WHG62_000383"
     CDS             complement(21491..21652)
                     /locus_tag="WHG62_000383"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724549.1"
                     /translation="MPSEKKMGCRIWMSDHLIRPNVGLRYSGLNSNQYGVASPCRTIC
                     TVCGFVALS"
     gene            complement(21642..22787)
                     /gene="dapE"
                     /locus_tag="WHG62_000384"
     CDS             complement(21642..22787)
                     /gene="dapE"
                     /locus_tag="WHG62_000384"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ1724550.1"
                     /translation="MTETRSLELAKELIARPSVTPDDQNCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARAAIAETCGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNAV"
     gene            complement(22887..23507)
                     /locus_tag="WHG62_000385"
     CDS             complement(22887..23507)
                     /locus_tag="WHG62_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenosine tetraphosphatase"
                     /protein_id="HEZ1724551.1"
                     /translation="MLTPKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPDYNRWLDNFDTEKYASFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGRQDVVKWIAETVEDLLSLYEACHGA"
     gene            complement(23541..24050)
                     /locus_tag="WHG62_000386"
     CDS             complement(23541..24050)
                     /locus_tag="WHG62_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ1724552.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQITRYFNVAAPLHHEDEEEDFFPLLLQYAPQAREGVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDAEAFKRFVAGYDVHLAIEEPLFDMGKMFIPKEKLTEIG
                     EIMAARRRR"
     gene            complement(24145..24696)
                     /gene="azu"
                     /locus_tag="WHG62_000387"
     CDS             complement(24145..24696)
                     /gene="azu"
                     /locus_tag="WHG62_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ1724553.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAVGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEEASLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(24978..25400)
                     /locus_tag="WHG62_000388"
     CDS             complement(24978..25400)
                     /locus_tag="WHG62_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ1724554.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDVSIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAAKLEKRHPELAAVLAELVRKHGA"
     gene            25531..28281
                     /gene="secA"
                     /locus_tag="WHG62_000389"
     CDS             25531..28281
                     /gene="secA"
                     /locus_tag="WHG62_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ1724555.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWIDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            28427..30199
                     /locus_tag="WHG62_000390"
     CDS             28427..30199
                     /locus_tag="WHG62_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ1724556.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIEALKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            30386..32314
                     /gene="rpoD"
                     /locus_tag="WHG62_000391"
     CDS             30386..32314
                     /gene="rpoD"
                     /locus_tag="WHG62_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ1724557.1"
                     /translation="MSRNQNHEEYQDDTRPLSIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGGDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            32461..33227
                     /locus_tag="WHG62_000392"
                     /pseudo
     CDS             32461..33227
                     /locus_tag="WHG62_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT         8491 a         9451 c         7800 g         7485 t
ORIGIN      
        1 ataaatttgc cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa actttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcgctgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg cccggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcataat cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ctgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgca cgctgacttt cctgccttcc
     1321 gccgccgcgc gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacagggcga cgggaaacca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatatcgga atcggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tattccgttt tcgagtacgc cggtgatttt gttgatttcg tcttccatcg
     1861 tcagcggttt gtcgatattc aagccgtgga catcgacgat ttggttgccg taaaaagtgg
     1921 tgtagccgat acgcaattca ggctgtccgc ccatagcgag cagtttgcgc gaaacaaggg
     1981 aacgcgcgct ttcgacgact tccacgggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcatc cgcaatgcag atgaattttt ctgatgcgct ggcgacgatt ttttcgttga
     2101 ggtgcgcgcc gccgccgccc ttaatcattt gcagggcgtg gttgacttcg tccgcaccgt
     2161 cgatatagac cgccaaaccc gatacttcgt tcagggaaac gacgggaatg tcgtactggg
     2221 caagcagttc gctggatttt ttggaggttg aaaccgcgcc tttgattttt ttgccgcttt
     2281 tgcccaaggc ttcgatgaaa aagttgatgg tcgagccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatcctt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacggcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg gtttgaattg aagttcagac
     3001 ggcatcgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cgcgtcgccc tgcaccagca aagggcggat gcccaatttt tccacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagcccgg cgcggaaaag
     3181 ctgcggcgtt tgtgcctgcc aaaggctcgt ccgctcgacg gttgcactaa tgttcccacc
     3241 gtccgcgcgc ttgagcgtat cggcaacggg aattgccaaa atcccgcctt cggcggcgtt
     3301 gcccgcctgt tctatcaaac gcgtcagagc ttcagacggc aggcagcagc gcgcggcatc
     3361 gtgtaccaga atattgtcat ccgccgatgc caagccgatt tccaacagtt ttgccacacc
     3421 gtttcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacgccctca tgccgttcaa aaatcccaat cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatac tgcttaggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagcgcgata tttttgcgct tcatgcgtcc gccccgccgt tttccgacgg cacggcttcc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatt gcccgtgcgc cgccagttcg
     3781 gcttcatccg ccttaatcac tttcagtttg gcaccgagtt tcatttcggc agatgcaaca
     3841 ggtttggctg ccggctcttc ctcctcggcc tcccccatca ggtcgaactg ccgccgcgtc
     3901 atagcaagat agacttcgcc caaaagttcg cagtcgatca atgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac agggcatcta ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattgtgg
     4141 ataatcagtt ccgcaccgcg caggaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctgtatc gtcaagccgt ggacgcgtgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcca aaccggcaaa ctcaaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tgtctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc ggcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgcta ctggcggttt
     4801 gcagccaggt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcaggc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgatg gaaaacaggg caagcatcag gttaaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atggcggtaa aaacgggctt gtgccgcacc atttcactca
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg tgtatcggca gccttggcgg
     5281 gtacagacgg cataaacagg ctgccgaccg tgcctccgac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac agcaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtgg
     5821 cgaaaagcgg gacgaaacgg cggcttttgc acaatccccg gacaccctgc tcaaccttca
     5881 tctttttcct ctttcttttc aagcaatttg cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggccaga tattcgttac
     6121 gcaaagttcc gacgggagct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg gatttccgtc tgaccgaacg gcgacaggac atggttgccc gctccatctt
     6241 ccaatttaac ggcaaaacgt ccgctctgcg gccgcgcctc cgactcatcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc tgtcccgatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 cgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt ccgtcaaaat acccgacttc cgccattttc acgcaaacgc ccgattaagc
     6541 caagcaattg caaagatttt ttgctagaat agcctgcttc ttttatcaac cttttcagac
     6601 ggccccacta ctttcccgcc caggaaggca aaacggattc ggcacgaatc cggttagtat
     6661 ccgtgtccga ttccaatgcc gtctgaaact ttccggagta agaaaatgtc ccaaaaattg
     6721 atcttggttt tgaactgcgg cagctcgtcc ctcaaaggcg cggtcctgga taacggcagc
     6781 ggcgaagtcc tgctcagctg ccttgccgaa aaactcaacc tgcccgatgc ctacatcaca
     6841 ttcaaagtaa acggcgaaaa acacaaagtc gatctgtccg cacatcccga ccacaccggc
     6901 gcggtcgaag ccctgatgga agaactcaaa gcccacggcc tcgacagccg catcggcgcc
     6961 atcggccacc gcgtcgtcag cggcggcgaa ctgtacagcg aatccatcct cgttgacgac
     7021 gaagtcattg ccggcatcga aaaatgcatc ccgctcgccc ccctgcacaa ccccgcccac
     7081 ctcttgggcc tgcgtgccgc gcaaagcatt ttcaaaggcc tgcccaacgt cgtcgtattc
     7141 gatacctcct tccaccaaac catgcccgaa gtcgcctaca aatacgccgt tccgcaggag
     7201 ttgtatgaaa aatacggcct gcgccgttac ggcgcgcacg gtaccagcta ccgcttcgtc
     7261 gccgacgaaa ccgcgcgctt cctcggcaaa gacaaaaaag acctgcgtat ggtcattgcc
     7321 cacttgggca acggcgcgtc catcactgcc gtcgccaacg gcgaatcgcg cgacaccagt
     7381 atgggcctga ccccgctgga agggctggta atgggtacgc gcagcggcga catcgatcct
     7441 tccgtattcg gcttcctcgc cgaaaacgcc aatatgacca tcgcccaaat cactgaaatg
     7501 ctgaacaaaa aatccggtct gctcggcatt tccggcctgt ccaacgactg ccgcaccatt
     7561 gaagaagaag ccgccaaggg gcataaaggc gcgaaattgg ccttggatat gtttatctac
     7621 cgccttgcca aatacatcgg cagtatggcg gttgccgcag gcggcttgga cgcactggtc
     7681 tttaccggcg gcatcggcga aaactccgac atcatccgcg aacgcgtaat cggctacttg
     7741 ggcttcctcg gtctgaacat cgaccaagaa gccaacctga aagcccgctt cggcaacgcc
     7801 ggcgtgatta ccactgccga cagcaaagcc gttgccgtgg tcattccgac caacgaagag
     7861 ctgatgattg cccacgacac tgcccgtttg agcggtctgt aaggttttat ccgcacacga
     7921 actgcctccg gaaatggagg cagttttttt atccggcttt ccatgcttaa acagcaccgc
     7981 ctcttttcag acgttgacgg ttgcagccga ctacctgaac cttaatgatt gactattttt
     8041 taatcatgtt attattttcc ataaaataca tgacattaag atgtttttcc acaaaagata
     8101 cacacaccgg caaacaccgg ctgtgtttat cttttcttat gcctattttt taatcatcgt
     8161 atttttatct tttaatttca atacgcaaac taacttatac acacggtttt cacatctttg
     8221 gactgcttcc gtgtgtatag cggatattgc cgttttcctt tctgacaaaa atgccgtctg
     8281 agaacttcag acggcatttg aaacatcgga atcagcggtt ttgttcatac cactcgataa
     8341 acttgtctgc tttgacaaaa cccagcagcg gctcgctgcg gctgccgtcg gagcggacga
     8401 caaacacgcc cggcggcccg aacagaccgt attctttcaa caacgcctga tgttcgggcg
     8461 tgttggcggt tacgtcgatt tggaaaaagc gttccatatc gactgcctga tgcacttccg
     8521 gctgattaag cgtgtaagcc gccatttctt tgcaggaaat gcaccagtcg gcataaaaat
     8581 ccaaaacgac gggtttgtcg ggatgttctt tcaacgccgt atccatcgct gccttcagcg
     8641 cggcagtatc ggcaaacatt tttccgtgtt ccgaagattt gcctgcttcg gccggcggat
     8701 tgagggtcag gaaatggtgc agcgcggtcg ttttgccgtt tgcgccctgc cagccgaacc
     8761 acgcgccgcc tatcagcaat atgccgccca atgcgaatgc cacagctttc ggacggcgtt
     8821 tctgcctgcg tccgttgacc agcagcatac aggcaggaac cagcatcagc agcgtgtaca
     8881 gcgcgacgac gagataatag ggcaagtgcg gcgtggcgag gtaaacggcg acggcaagca
     8941 ggataaagcc gaaagcgtat ttgacggcat tcatccaatc gcctgcctta ggcaggatat
     9001 gcccgccgaa cgtgccgatg gcaatcagcg gaacgccggt gcccaacgcc aaagtgtaaa
     9061 gtgccaaacc gcctaaaacc gcatcgcccg tctgaccgat gtagcccaaa gcaaatgcca
     9121 gcggcggggc gacgcacggc ccgacaatca gcgcggacaa tatgcccata ataaagacgg
     9181 aaacgatttt accgcctgaa agcctgctgc tttgattctg aaaatacgac tgcacggcgt
     9241 tgggaagctg gatgttgaac agcccgaaca tagacagtgc caagacgacc atcaaagccg
     9301 atgccgccaa cacgacccaa gcctgctgca accatacggt cagcagcgcg cccgtcagtc
     9361 cggcaacaat gccgaccagc gtataagtca gagccaaacc ctgaacataa acgacggaca
     9421 gcacaaacgc ccgcgccttg cccgcctttt tgtcgccgac cacaatactg gaaacaatcg
     9481 gcaacagggg atacatacag gcggtaaaac tcagacccaa accggcgaga aaaaacgcca
     9541 aaagattggc gttgagcgta tcccaagaca gcttgaaacg gctgtcgccg ccctcatccc
     9601 ccttcggggg cggcagcgcc ccgctgccgt tttgagagga aggctgcaaa aagcgatctt
     9661 tggcggatgc cggttcgtcg gtttgcggat ggtaagtgcc gttgccggaa atatcaaact
     9721 cggtatccac gggcggatag cacacgccgg cttcggcaca gccctgatag gtcaaaacca
     9781 atttatacgg ttcgccgaca gcctttgcat aaggaaaggc aacctgcgct tcgtgatggt
     9841 aaaccgtctg cctgccgaaa aactcgtctt ccttctcttc gcccttgctg aaagaaggct
     9901 gtcccaacaa atccgccgga tcggtcttgc cgacgatttt cgcctgatac atatagtatc
     9961 cgtcggcaat cctgaaacgg acgttcacac cgtcgtcggc aacggcaagc tccggcacga
    10021 atgccttttc cggcggcagc agatcgttcg catccagcgc gaaagctcgt ccgcacaaca
    10081 tcaaaaatac ggcgaacagg caaatcagtt ttttcataat cgaatccgtt tcagacaaat
    10141 aatttgtctg cattataaat ggtaaggttg acggtgggat ttaatttatg taaaacccgc
    10201 cattatccga acctatttcc ataaacatct tatcgaaccc gccatgtacg atgtcaatac
    10261 ccacgatgtc cgccgctttt tcgcccacgt gtggcagcag cggctcaatc cgctgcaact
    10321 gagcgcactg gaacagaaag ccctccgcat tgtcgaagcc catcccgaat accaccgcta
    10381 tctcgaacgc atcgaagacc atctggacac cgactggctg cccgaaaacg gcgaaagcaa
    10441 ccccttcctg catatgtcgc tgcatctgtc cgtccaagaa caggcgggca tagaccagcc
    10501 gcacggcata cgcgccatcc acgacaccct gtgcgccaaa cgcggctggc tggaagccga
    10561 acacgaaatg atggaggcac tggcggaaac actgtggacg gcgcaacgct acggcaccgg
    10621 tttggatgtc aatttctaca tgacccgact gcgcaaactc atcggcttgg gtgcagaaaa
    10681 tcaagccagg ttgaacccgc atgaaatcgc ctgaccatac caaccgcctg caaaatgcca
    10741 tctgaagcgg aacaacccct ttcagacggc atgcatttcc cccaatcatt tccacaacgc
    10801 ctttttcagc ataatcaacc aatccttctt atccaaaacg gggcgttgtg caaacacatc
    10861 gtatcggcac gcgtccagtt tctgcaaaat caactgcgcc cccaacacaa tcatacggag
    10921 ttccaaaccg atacgcccct tcagttccct tgccaaaggc gaacccgcct tcagcatacg
    10981 gaatgcgcgt cggcactcat acgccatcag ccgctgaaac gccgcatccg cccgtcctgc
    11041 cgcgatctgt tcctcagaaa caccgaattt caacaaatcg tcctgcggga tataaaccct
    11101 gcccttttgc caatccacag ccacatcctg ccagaaattg accagttgca aagccgtaca
    11161 aatgccgtcg ctttgcgcca cgcacaccgc atccgttttc ccgtacaaag ccagcataat
    11221 gcgtccgaca gggttggcgg aacgccgaca ataatcggcc agctcgccga aatgcgcgta
    11281 ccgcgttttg accacatcct gagaaaatgc agaaagcaaa tcataaaacg gctgcaaatc
    11341 caaaccgaac ggcacaaccg cctcggcatc caatcgtgca atcaaaggat gcgccgaccg
    11401 gccgcccgat gccaacacgt ccaactcgcg ccgcaaaccc tccaaccccg ccaacctggc
    11461 ttcagacggc atactgccct cgtccgccat atcgtccgcc gtccgtgcaa acgcatacac
    11521 cgcatgaacc ggcttcctca acctgcgcgg caaaatcagc gaaccgacgg gaaaattttc
    11581 ataatgccca accgacatac cttctccatc catcaaacaa aatgccgtct gaaacggaac
    11641 aaaccctttt cagacggcat cagatacctc caagctgccg gcaatcagtg gtggtgatga
    11701 ccgtgcgggc cgtggacatg accgtgtgcg atttcctcat cggatgcatc gcgcacgctt
    11761 tcaaccgtag ccttaaagcg gattttcatg cctgccaaag gatggttgcc gtccaccacc
    11821 gccttgccgt cggcaacatc ggttacacga tagacgacaa catcgccggt ttcaggatcg
    11881 tcggcttcaa acatcatgcc gacttcgact tcaacaggga acacgcccgc atcttcaata
    11941 cggaccaact ccggatcctg ctcgccgaac gcatcgtcgg gcgacagcgc cacatcgacc
    12001 gtatcgccgg catccttacc gtgcaacgcc tcttccacca aagggaaaat gccgtcgtaa
    12061 ccgccgtgca gatacgcaat cggttcttcg gttttgtcca aaagctgatt gttggcatca
    12121 tacatctcat aatgcagcga aaccacggaa tttttcacga tagccatatt tgtcctttca
    12181 ggaacagcag attgattaca ggcgcattct aacacaaccg ccgcgccggc cgattaccgt
    12241 taacctgttc ataaactgta cagcacatat ttcaatgtaa atttttgtta ttttattgcg
    12301 gtgtaacttt tttacaacat tcttaaaacc attccgacct gtctgccgac tttcccaatc
    12361 cgccttaata aatcatacaa gatactgaaa ttatattaat ctctataata tttatcccta
    12421 tcgaattttt aacagcaaaa ccgttttaca ggatttatca atccgcccgc cagaaaactt
    12481 ttcattcaaa cctttttccc atctgtacga cattgcaatc ccttattcca tagtgcataa
    12541 ttacgcaaat tcagcgatga atttccaacc cggtttgtag tatggtcgat aaagacctat
    12601 ttgtttcaat aatttaaatt ggttctaaag gttactaaaa tgaaaaaatc cctgtttgcc
    12661 gctgctttgt tgtctttggt tctggcagcc tgcggcggtg aaaaagccgc tgaagctccc
    12721 gctgctgaag cacctgccgc tgaagctccc gctaccgaag cacctgccgc cgaagctccc
    12781 gctgctgaag ctgccgctac tgaagcacct gccgccgaag ctcccgctgc tgaagctgcc
    12841 gctaccgaag cacctgccgc tgaagctcct gctgccgaag ctgcaaaata agcattttcc
    12901 gcttgcaaaa aagcaggata cgttcagtat cctgcttttt tgatttttca gacggcatca
    12961 gattcccttc ctcaatcttc tccctaccct tccgacaaac atgcctgacc ttcataccga
    13021 attttcccga ctcctgccga cagatgaaat tgccgaactt tctccgacgc ttttaaaaga
    13081 ccagcgcaac cgctttacgt ctgcaccaga catcattttg cagccgcgca gcgttgaaag
    13141 tgtgcaaacc attatgcgtt tttgttacga acaccgtatt ccggttacgc cgcaaggcgg
    13201 caataccggt ttgtgcggcg cggcagtatc ggaaaacggc gtattgctga acctttccaa
    13261 actcaaccgc atccgcagca tcaatttgtc agacaactgc ataaccgtcg aagcaggttc
    13321 cgtactccaa accgtccaac aggcagccga agcctcaaac aggctgtttc cactcagtct
    13381 cgccagcgaa ggctcgtgcc aaatcggcgg caacatcgcc tgcaatgccg gaggtttgaa
    13441 cgtattgcgt tacggcacga tgcgcgacct ggttatcggt ttggaagtcg tcctccccaa
    13501 cggcgaacgg gtttcccatc tccatcccct gcataaaaac accaccggct acgacctgcg
    13561 ccatctgttt atcggcagcg aaggcacact gggcatcatc actgccgcca cactcaagct
    13621 ttttgcccgt ccctcggaca aggcaacggc atgggtcggc atacccgaca tcgaatccgc
    13681 cgtccgcctg ctgaccgaaa cccaagctca ctttgccgaa cgcctatgca gttttgagct
    13741 gatcggccgt tttgccgccg agttgtcttc cgaattcagc aaattccccc tgccgacaca
    13801 ttcagaatgg catattttac ttgagttgac cgactcatta cccgacagca atcttgatga
    13861 tcggcttgtc gaatttcttt ataaaaaagg atttaccgac agcgtattgg cacaaagcga
    13921 acaagaacgt atccatatgt ggacactgcg tgaaaacatc tccgcatcgc aacgcaaact
    13981 gggcaccagc atcaaacacg atattgccgt ccccatcggg cacgttgccg actttgtccg
    14041 ccggtgtgcc aaagatttgg aacagaattt caaaggcata caaatcgtct gcttcggaca
    14101 tctgggcgac ggcagcctac actacaatac ttttctgccg gatatactca gtaacgaggc
    14161 atatcgttac gaagatgaca tcaacagcac agtctatcgc aacgttcttg cctgcaacgg
    14221 tacagttgcc gccgaacacg gcataggcat catcaaaaaa cagtggctgg acaaagtacg
    14281 cacgcctgcc gaaatcgccc tgatgaaaag catcaaacaa caccttgatc catataacat
    14341 tatgaatccg ggcaaactgc ttccgtaacc ggcatttctg atttgcatac acaacaaaga
    14401 aagggacaat agatccgatt gtcggtttag cgcgagctcg tgagtgcggt aaaaaattgg
    14461 tggaaatgac acgaaaaatg accgcatttt taaaataaaa aaatcggcag tgaatttccc
    14521 tgccgatttt attttgttac aacttaactt aaaacgtcca ctgcaaattc aacgcacctt
    14581 gtttagcctg atgatgtttg cctgtttggc ggttgaatga ggcttgtaag gttaagtgag
    14641 atttgatttt cactgctaca cctaattggc tctcaattgc cgtcttattg tttatcactc
    14701 gacgctctcc gtccatttcc acaccgaaag gtttgttgtg gtaaagcgcg ttcacagcgg
    14761 cgaaaggttc aatagcgata tttttataga gtgaaaattg cgctttagct tgaacgccca
    14821 ctcggctttg taattggcgg gagccaagta aattcacgtg ggcattttcg ctatcgctga
    14881 attttccgtt tacccccaaa taagtcaatt gtgcctgtgg ttgtaggtaa acacgaaggc
    14941 tgttgccctt tttagttacg tgttccgcca ataaagcgtt gtaacctgct tcaattgagg
    15001 cagtaatacc ttttgaagta aaacgttctg taccatcttc agtgttgata cggtggcgga
    15061 aacgttgata ttgtacccag ctatccgcat acgcacctgt ctgtttgtcc tgaagctgat
    15121 gccaagtggc gtaaacgcct gcaccaaagc ctttcacatt tcccgttgta agattgtctg
    15181 tatctggatt gcggaaagta ctgcgttgtt ctgcctgtcc gcccattaag ccaatagaaa
    15241 gttgattact ttcgttttgc catgtgaata cttcgccgcc gagttgtaca cctttacgat
    15301 agccttctac aggtgctgtt ttgccttgca cccattgatt ggaatgtccg tcaatcacac
    15361 gcaaccacaa gcctttgcgt ggtaaagtgc ggtcaaaaat atcgctgttt ttgtcgttca
    15421 aacgcaaggc gaataaggta ttggcggctt gagcctgttg tgcataggag gcgacaagat
    15481 gagttggaat ggcgagtttt tctacaccga tacaaaaacc gtttggacat tgtcgtaaaa
    15541 ataaacgata tctgcctttt ttatattctt ctaaaagata aaatgcattc ggtttaacat
    15601 cggtttctgt tttgatgagt tgtcggtaag tcaggttttt taaattgttt aaggcttttt
    15661 cttcaaaaac aatagccgtt ttccctgtta ccttgctttt taacgttaat acgggcttgt
    15721 cagcctctct ttcgctcaaa tcataagcaa acagaattct gctattatgg ttactacgat
    15781 agcctgtata atcgccaaac tctcttttta aatatttttc gttgaataag gcatcatcgg
    15841 gggttggtct aatgcgactt tcgcctacaa caaggctttc attttttgtg ttaaaacgaa
    15901 tactgctatt atccaaattt aaataactga catcagaatc ccaacgaggc tcccaaagag
    15961 aactctctaa gtctactcgg taaagatgaa taatttgccc aataacatgg gaattttcgg
    16021 aaacttttaa tctaggaagg gggagggaga atgtagacca atctgcatat aacgctattg
    16081 gactacgtat gtagtgttta taatacaaat cagcaacatt accaacagca agaatttcac
    16141 tgttaatatt gctatgtttt actgttgcat aagaattgaa gatattattc ttataaaatt
    16201 catacagcca ggagccgcca tatccatcat ctgaataaaa atatcctagc ggagagaatg
    16261 tagtaatttt tttaatcttg ttctaaattt atcgataaat tgtttagctt gttcttccgt
    16321 atcgccattt ctttctttaa cgccaaatcc ctgcacgaaa gcagccgtgt agctgggtgt
    16381 ataagggctg tcaaaaaaag agatcttttt gtcaggatca ataggtttat catcaattgg
    16441 gatataaaaa attggatacg agaaatttcc tgttgctgcc ccctcaatgt catgacggag
    16501 accagtttct tttggcacat caagcctgaa tagatcatct ttccaatatt cactatttct
    16561 atcgcggagt ttttttaagc ggataatttc atcatcagtg agcttggttt tgtcgtaaac
    16621 gtaatcaaca gccaaaagcg gggaagaata aagaacagaa aacaatagac ttaaaataaa
    16681 tgatttttta aacttctgct tgcttgcttg cttgcttcga gtttcataat aaattttcct
    16741 ttgtcaagta aaaataaata gggcgtggat tttagcataa aactgaacaa aaaatgtcat
    16801 ttagttcaaa ttttctctat ttatttctta tttattaaaa gtaaacgttt gctttttgct
    16861 attttgtcaa gccagtttga aaatgtgtat aattgccctc gttatttaca aaaatttcag
    16921 gaaaaatgac cgcactttac ccttggctaa tgccaattta tcatcaaatt gctcaaacct
    16981 ttgacgaagg tttggggcat catgccgtac tgattaaagc ggatgctggt ttaggtgtag
    17041 aacgtttaca catcaggcgg cagccttgcc cataccgtct gaagcactgt ttccacaatc
    17101 agcgcgtatg cttaatcaac cgctgtttct cgcgtttcca atccgcctct ttcatactct
    17161 gacgtttgtc gtgctgtttc ttaccttttg ccaaaccgat ttccatcttg atttttccgc
    17221 gcgaaaaatg caaatccagc ggcacgatgg tgtagccggc acgttcggtt ttgccgatta
    17281 atttgttgat ttccgactgg ttcaacaaga gcttgcgcgg acgtacggca tctggtttaa
    17341 tgtgtgtcga ggctgtgggc aaagccgtaa tatggcagcc gaccagataa aacgcgtctt
    17401 ttttccaata gatataactc tctttaagct gtacgcgcgc ggcgcggatt gctttgactt
    17461 cccagccttc caagaccaaa ccggcttcaa tccggtcttc aatgaaaaaa tcgtgaaatg
    17521 cttttttatt gttcgcaata gccataaaca tcctatcaat atccgccgtc agacggcata
    17581 aacccgaaaa cagaacccat cataccgcct cttcaaccgc ctgcacaatc ttctcgggat
    17641 acagcctgtt gaggcagtcg gtatgcccca gcggacattc ccgcttaaaa cagggcgaac
    17701 attccaagtg caggctgacg attttcgccc tgtcgctcaa aggcggcgta tgcgtcgggc
    17761 tggaagaacc gtaaaccgcc accaccttcc tgcccaatgc cgccgccaag tgcatcagcc
    17821 cgctgtcgtt gcacacgacc gtgtccgcca acgacagcaa atccattgcc tgcgacaaat
    17881 cggtctttcc gcataaattc acacacatac cgtctgaaag gcagttgatt tcctcggcaa
    17941 tttcatcatc tttttgcgaa ccgaacagcc aaacctgcca acccgccgcc gaataatgtt
    18001 tgcccaactc ggcaaaatac cttgtcggcc aacgctttgc cggcccgaat tccgcacccg
    18061 gacaaaaagc cagaacaggc tttccaatat ccaagccaaa ggtttcgaca gaaatttccc
    18121 gccgccgttc atcaatggaa aactcgggga atcccgaatg cccgtcaaaa tcctcctggc
    18181 tcggatgcgc gagagccgta tatctgtcca ccatcaaagg cagacgttcc ttatccagcc
    18241 tgcgtatatc gttcaacaga aaataacggc tttcaccgac ataacccgtc cttttggcaa
    18301 tacccgttgc tagcgcgatg actgccgatt tcaaagaacc gggcaacacg ataacctgat
    18361 cgtatccgcg ccgccccaaa tccctgccga cccgccagcg gcgtttcaac tccaacgcac
    18421 cgtgtccgaa cggattctca agaatttcat tcacttccgg catacgctcg aacaccgcca
    18481 tcgaccactt cggcgcgaac acatcaatcg tgcaaccggg gtgaagttcc ttcaaacggc
    18541 ggaacaaggg ctgggtcatc acgcagtcgc ctatccaact gggagaaata atcaggattt
    18601 tgatggacat aacaagaaac cgaaatcaga caggcggaat tttaccgcga aaccgttgga
    18661 aaacctatct cgccgcattc cgaacgccgg acgtgcaaat atgaaaaagc ccgaacattc
    18721 aagttcgggc ttcaaaattc tggctccccg acctgggctc gaaccaggga cctgcggatt
    18781 aacagtccgt cgctctaccg actgagctat cggggaatgg ggcgtattat agcgtccgga
    18841 aaaaatgtgt caatccttaa ttttggaaaa atgggcgaca aaacgacaag catatgaatc
    18901 agaaagacat taagaccgat gccttaaaag gattgccgtt gtatgaattt ccacagccgt
    18961 catcacacca tatttaagcc cgatgagccg ttctgccctc ccccgcttaa aacaatgccg
    19021 tctgaacttc gccgcgttcc aaagccagta aaaactgttt gcggttcaac ccgcccgcgt
    19081 agccggtcag tttgccgtcg ctgccgatga cgcggtggca gggaatcagg atagatactt
    19141 tgttctgccc gttggcggcg gcaacggcgc ggacggcttt ggggttgccc aaacgctgcg
    19201 cctgctcctt gtagctgcgc gtttcgccgt aaggaatcgc caagagcgcg tcccatgcct
    19261 gcttttgaaa ctcggtgcca atctgctcca aaggcgtggc aaaggttttc agacgaccct
    19321 tgaagtataa gtccaattcc tgccgcaaaa gttgcgtccg ctcatcctcc cgaaacacaa
    19381 accgtccgcg caaggctttt tggacggcgg caatttcctg ttccaaatgc ttctgtccga
    19441 caaactccag cagacacaat cccttatttc cgaacaccgc cagcatctcg cccaaaggcg
    19501 tggcaatggc ggcacacacc agctcgttca agctgtcggg ataacgcgct tccaacaaac
    19561 ggatggcgcg gcggatgcgg acatattctt caggcgcgca gccgatattg tcccaaaaat
    19621 cccgctcgaa ctgcttggct tcgtgttccg tcagattggg atacggcata acttcgcact
    19681 caaaaacttg ggtttcgagc caatagcgga tttcatccca ttttgacggc agattgttta
    19741 aggaaggcag ggtaatcatt cgtttgctcc gtatctctat catggatttg acggcaaaat
    19801 tcccaatttt cgccattccc gcacgctgat gcaggaacgg gctacgacgt aaatcttgag
    19861 ggttaggttg cggcaatgcc taaatatgcg atatttccaa agcctcaggg aaaggaatta
    19921 aagacttcag acgacctgca aaggctcgtc tgaaaccacg atttttgcat ttgcgcattc
    19981 tggcacatca tccaaccgtt tcggcacatt cctgccgccg ttgacagcct ataatgaatc
    20041 cacttattca tcaagcaaag gaatcatcta tgcaaacccg cattctctcc gccgtactgc
    20101 tggctttttc aaccgctgcc tttgccgggg gcgcattcac gctgcaattc gacaacccgt
    20161 ccgaagacgg cggcttcacg caaaaccagc ttttgagcgc gccttacgga tttggctgtt
    20221 cgggcggcaa tgcttcgccc gcgctgtcgt ggaaaaatcc gcccgccggg acaaaaagtt
    20281 tcgtcctgac cgtttacgat aaagacgcgc cgaccggact gggctggatg caccgggtgg
    20341 tcgccgacat tcccgccgat gtccaccgcc gcaacgcgac ctcgctgcaa ttaagccgct
    20401 gcgccaacat cgccgaccgg actgggctgg atgcactggg tggtcgccga cattcccgcc
    20461 gatgtccgcc gccgcaacgc ggcctcgctg caattaagcc gctgcgccaa catcgccgac
    20521 gaccagtccg cagccatatc ggcggtaatc agtttgcgga tttgccgcat caggttgacg
    20581 ccttcgtaca cggcaaaacc gatgccgtca tgctgcaacc acgccaacac gccgcaaagc
    20641 gcgacctccg ccgcattgtg cggcacttct tcatccgtca gcaccgccgc cgcataatca
    20701 aacgccgcgc ccatccgccc ggggtgcggc agcttcaccg catcgcacac tgcctgcgcc
    20761 gtcccgtatt gtgcggcaaa cctttctatg gcttcctgtt cgaaagcaat ccattgcgcc
    20821 tgatagaggc cgtctgaatc gggaatatta ataacgtcaa acgtctgtcc gcctgccaac
    20881 gcaaccgcct cacccgccgc aatcctcaat tcgcgcctcg cccaccgcag cttcttgctt
    20941 ccgcgccgca cgataagcac agctggttca tataccgcca cgctgcggta caaggcggta
    21001 tgatgttgca cgatgccgcc caaagcaccc aatcgttcgc gcgtatgaaa gtatagtgga
    21061 ttaaatttaa atcaggacaa ggcgacgaag ccgcagacag tacaaatcgt acggcaaggc
    21121 aaggcaacgc cgtactggtt taaatttaat ccactatatc tcaaacccac gttaggtcta
    21181 agcaaatggt cggacatcct tatccgacag cccatcttct tttcagacgg cattgcaaat
    21241 ttaagtttga cgtgcgttca aaataaggca gttaatgcga agccaaattc cgtcggcgtg
    21301 cctgcaactt gactccctcc cctgtggggg agggttgggg agagggtaaa acggggcaga
    21361 tacagacaat atttccgtta ccgccccgat gccctctccc taaccctctc ccacgggaga
    21421 gggaatggat tgccgtttaa ataaaaaaat ctacataaaa atcaatgttt tatagtggat
    21481 taaatttaaa tcaggacaag gcgacgaagc cgcagacagt acaaatagta cggcaaggcg
    21541 aggcaacgcc gtactggttt gaatttaatc cactatatct caaacccaca ttaggtctaa
    21601 tcaaatggtc ggacatccat atccgacagc ccattttctt ttcagacggc atttccagcc
    21661 aacaagcgcg ccaatatccc ctcatacacc gccgacagct tcggaatgtc gtttagccgc
    21721 acgttttcgt tgatttggtg gatggtcgca ttggacgggc ctaattcgat gagttctttc
    21781 gcaatggctt taatgaagcg tccgtccgaa gtgccgccgg tggtggacag ttcggtctcc
    21841 acgccgcagg tttcggcaat ggctgcgcgt gccacgtcgg tcagtttgcc cgcatgggtc
    21901 agaaaaggct gccccgaaca cgaccactgt aaatcgtatt gcacgccgtg tttgtccaaa
    21961 atggcgtgaa cgcgttgttt cagccctgct tcggtggact cggtggagaa gcggaaattg
    22021 aatttgacat tcagctcgcc cggaatgacg ttggtcgcgc ctgtaccgcc gttgatattg
    22081 gaaatttgaa agctggtcgg cggaaagtat tcgttgcctt cgtcccagac ttcctgcgtc
    22141 agctctaaca aggccggggc aaaagtgtgg acgggattga ttgccaaatg cggataggca
    22201 atatgtcctt gcttgccttt tacggtcagg ttgcccgaca gcgagccgcg ccggccgttt
    22261 ttaatcatat cgcccaattt gtccacggct gtcggttcgc cgacgatgca gtagtcgata
    22321 agctcgtcgc gcgctttcaa tacatcgacg actttggtcg tgccgtccaa cgcgtcgccc
    22381 tcttcgtcgg aagtaatcag aagcgcaatg ctgccttggt ggtcgggatg ttcggcaacg
    22441 aagcgttcac aggcggtaac gaagcaggcg atgctggttt tcatgtctgc cgcgccgcgc
    22501 ccgtataatc ttccgtcgcg ctcggccggt tcgaacgggg gcgaatccca tttttcgaca
    22561 ggacctgtcg gtacaacgtc ggtatgccct gcaaaacaga cgacgggagc tttcgtgccg
    22621 cgtcgcaacc agatgttttt ggtgtcgccg aaatggagtt cttcagccgc aaaaccgatt
    22681 ttgtgcaggc gttcggcaag cagtttttgg caattttggt catctggcgt aacggacggt
    22741 cgggcaatca attctttggc gagttctagg gatcgggttt cggtcatttt tcggcttttc
    22801 tgtttgagat gccgtctgaa cggcgtttca gacggcattt gatgttgaat ggaacgggct
    22861 aacgatagcg aagcgggttc ttcaggtcaa gcaccatgac acgcttcata aagcgacagc
    22921 aagtcttcca ctgtttccgc tatccatttc acgacatcct gcctgcccaa atcgtcgcgc
    22981 tcgatgtgtt tgccgatgca gaagaaatct tcgtcgtttt gcaaccttcg gtcggattca
    23041 ttttgctgcg cgacagtgcg gtagtcgtcg tattcgcttt ccgcgccgtg ccacatatcg
    23101 aaagaagcgt atttttcagt atcaaaatta tccaaccaac ggttgtaatc aggcagcgca
    23161 atcggcgaca cgtcggcttt gtagcaatgc cagtccaagc tgacactcaa acggcggcgg
    23221 ttgagcagta tcgacaaaat cgcggcggaa tttttatatt gttcgtattt gaagtaggca
    23281 aagaaatggg cgcgaacctg ccagccgttg caccagcgtt cgatgtgcgg cggcgcaaac
    23341 ggcgcaccca attcggcggc aacctgctga atcagctgct gccatatctg ccagttttcc
    23401 ttgtagtcgg ctttgatttg cggaatgctt tcaggctggt attttttaag ctgggaaaat
    23461 tggaaaaacg ggatattgaa caaatcgcaa cttttcgggg tcagcataat atatccttga
    23521 gacgattgtt tcagacggca ttatctgcgc cggcgcgccg ccatgatttc accgatttcg
    23581 gtcagtttct ctttggggat gaacatcttg cccatgtcga acaagggttc ttcaatcgcc
    23641 aaatgaacat catatcccgc cacaaaacgt ttgaacgctt ccgcatcggg aacataagca
    23701 ttgtctgctt cgagcttggc aaattcggcg gaaacagccg cccagttgtc gtgcagcccg
    23761 atatgttggc gtaaaagctc gtccacacct tcacgtgctt gcggcgcgta ttgcagcagc
    23821 agcgggaaaa agtcttcttc ttcgtcctca tgatgcagcg gcgcggcaac gttgaaatac
    23881 cgggtgattt ggcggatggt ttgcaaaaca atttgattgc agccgttttc ggcgatgtag
    23941 tccgacagca tggcgacttg tccgcaaaaa cggcgcactt tgccgtggca ggcatacagc
    24001 atttcaatcg gttcggcaaa ggtaacgctt ttggtttcaa acggattcat gttttcgttc
    24061 tcaacgggca cttttcaagc agtcatttta taataaaaca gcctgcacaa agcaggctgt
    24121 ccgtcttttg agactttaag cggattaatc gaccaaagtc actttgccgt tcatcaaagc
    24181 accgtgacct gggaaggtac aagcgaattt atattcgccg tcggccaatt tagcaggatc
    24241 cagagtcagg gaagcttctt cgccgccgcc gatcagtttg gtatgggcaa caacgcgtgc
    24301 atcatcaggt ttgacatagt cggtatcggc agcacctacg ccgtctttaa atacgccgtc
    24361 catgtcttca gctttggcaa tcacgagatt gtgacccatg ctggctttgg gttgcgtacc
    24421 ggtatgtttc agagtgatgg taaactcttt acatgctttg ctgacttgga tgtctttggt
    24481 gttgaactgc atattgtcgt tggattcgac agttgccgca cagttgccga cagcaggggc
    24541 ttcggcagca tctgcaggag cagcttcggc ggcaggtgct tcggaagcgg gtgcttcagc
    24601 agcaggagtt gcctcggcag caggcgcggc aggttcttga gagcaggcag ccaaaccgat
    24661 aacggcagca gaaatcagag ccagatacgc tttcataaca aatctccaat cgataaaata
    24721 atattcggtt ttacagaaat caaagtgcaa ccgccattaa caaaaccttg aaaaagattc
    24781 cgccgcgttg cacaaacaga tgtttcggag cggtattttg ctacaaattt catttgaaat
    24841 caaagcctgt ctgcaagttt acaatcgttt actttaaaag gggcaatttt accccgaacc
    24901 tatttcttta gtattaggga agccgtcccc cgctgcgcaa atattaacgg atatttacaa
    24961 catccctgcc ggccgcctta tgccccgtgc ttcctgacca gctccgccag cactgccgcc
    25021 aattcgggat gccgtttttc caactttgcc gccgccgaac cgaaactctc cagcgcagcc
    25081 ttactcaaat gcagggtatt ggttttcggc ggtttttccg gtttcgggac cagcctgacc
    25141 gaaacagagc gtatcgaaac atcaagccct gccaactgcg gcaataccga cggtgcaatc
    25201 attttcaaac gcgatgccgc catattgttt gccgccaaaa ggacaagcct gccgtcttcg
    25261 atacatgccg tctgaaaatg cgggtgcagg ttggcaggca gcagtttttt cacggcggca
    25321 tccaaccgcc gccactgtcc cgcctgtttc aaaagtccgg aaagcagcgc gtcccgcctg
    25381 cccaactgtt ccaaattcat aaaacataca cccaaaaaga ttgaaatacc gcaaacacgc
    25441 ctttatttca gacggcatta gcactttgca caaacgcttg tgttaaaatc gcgttttcgc
    25501 ccactattat atcaggcgca ggaattattc atgctgacaa acattgccaa gaaaatcttc
    25561 ggcagccgca acgaccgctt gctgaaacaa taccgtaaat ccgttgccag aatcaacgcg
    25621 ctcgaagaac agatgcaagc cctaagcgat gctgatctgc aagccaaaac tgccgaattc
    25681 aaacaacgcc tcgccgacgg tcagactttg gacggcattt tgcccgaagc cttcgccgtc
    25741 tgccgcgaag cgtcccgccg caccctcggt atgcgccact tcgacgtgca gcttatcggc
    25801 ggtatggtgc tgcacgacgg caaaatcgcc gaaatgcgta ccggcgaagg caaaaccctg
    25861 gtcgccaccc tcgccgtcta tctcaacgcg ctggccggca aaggcgtaca cgtcgttacc
    25921 gtcaacgact acctcgcctc acgcgatgcg ggcattatgg agccgctcta caatttcctc
    25981 ggccttaccg tgggcgtgat tatttcagat atgcagccgt tcgaccgtca aaacgcctat
    26041 gccgccgata tcacctacgg caccaataat gaattcggct tcgactacct gcgcgacaat
    26101 atggttaccg accaatacga caaagtgcag cgcgaattga attttgccgt tgtcgatgaa
    26161 gtggattcca tcttgattga cgaagcgcgc actccgctga ttatctccgg tcaggcggat
    26221 gacaacatcc agttgtacca aatcatgaac accgttccgc cccacctcgt ccgtcaagag
    26281 acagaagaag gcgaaggcga ctattggatc gacgaaaagg cacatcaggt catcctgagc
    26341 gaagcaggtc acgaacacgc cgagcaaatc ctgacccaaa tgggattgct ggcagaaaac
    26401 gactccctct attccgccgc caatatcgcc ctgatgcacc accttatggc ggcattgcgc
    26461 gcgcattccc tcttccacaa agaccaacat tacgtcatcc aagacggcga aatcgtcatc
    26521 gtggacgaat tcaccggccg gctgatgtcc ggccgccgct ggtcggaggg tctgcatcaa
    26581 gccgtcgaag ccaaagaagg cgtggaaatc aaacgcgaaa accaaaccct cgcctccatc
    26641 accttccaaa actatttccg cctgtacacc aagctctccg gtatgaccgg tacggcagat
    26701 accgaggctt tcgagttcca aagcatttat aacctcgaaa ccgtcattat cccgaccaac
    26761 cgccccgtac agcgcaaaga cttcaacgac cagattttcc gttccgccga agaaaaattc
    26821 gaagccgtcg tcaaagacat cgaagaatgc cacaaacgtg ggcagcccgt cctcgtcggc
    26881 accaccagca tcgaaaactc cgaactggtc tcccaccttc tgcaaaaagc cggactgccg
    26941 cacaacgtcc tcaacgccaa agaacacgaa cgcgaagccc tgattgtcgc ccaagccggc
    27001 aaagtcggcg cgattaccgt tgccaccaat atggcgggac gcggtacgga catcgtttta
    27061 ggcggcaacc tgaagcacca aaccgatgcc atccgtgccg acgaaacctt gagcgacgaa
    27121 gagaaacagg cacaaatcgc cgcactcgaa aacggctggc aggcagaaca cgataaagta
    27181 atggaagcag gcggcctgca catcatcggt acggaacgcc acgaaagccg ccgtatcgac
    27241 aaccaattgc gcggacgttc cggccgtcag ggcgaccccg gatccagccg tttctacctt
    27301 tcgtttgaag acccgctgct gcgcttattc gcactcgacc gcgccgccgc catcctcaac
    27361 cgtctcgccc ccgaacgcgg cgttgccatc gaacacaacc tgctgacgcg ccaaatcgaa
    27421 ggggcgcaac gcaaagtcga aggcagaaac ttcgatatgc gcaaacaggt tttggaatac
    27481 gacgacgttg ccaacgaaca gcgcaaagtc atttacagcc agcgcaacga aattctgacc
    27541 agcaaagaca tcagcgacct gatgcaggaa atccgttctg atgtcgtcag cgacctcgtg
    27601 gatacctata tgcctcccga cagcatggaa gaacaatggg acatcccgac tttggagaac
    27661 cgtctggctg ccgaattcag actgcacgaa gacatccaat cttggctgaa ggcggacaat
    27721 gcgattgacg gtcaagacat caaagaacgc ctgatcgaac gcatcgaaaa cgaatatgcc
    27781 gccaaaaccg aactggtcgg taagcaggca atggccgatt tcgagcgcaa cgtgatgttg
    27841 caggtcatcg acaaccaatg gcgcgaacac ctcgccgcta tggactacct gcgacaaggc
    27901 atacacctgc gcagctatgc ccaaaaaaat ccgaagcagg aatataaacg tgaagccttt
    27961 accatgttcc aagacctgtg gaacggcatc aaattccata ttgcctccct gcttacctcg
    28021 gttcaaatcg aacaaaaccc tgtcgcggtg gttgaagagc aacccatcgg caacatccag
    28081 tccatccatt ccgaatcgcc cgatatggaa gaacttttgg gtcagtcgca aaccgatttg
    28141 gttaccgagg cctttaatcc cgatggaacg gatttcagcc ccgaagcctt ggaagcgcgg
    28201 ggacaaatcg tccaccgcaa cgacccctgc ccctgcggca gcggtttgaa atacaaacaa
    28261 tgccacggca aactggctta agcgtttgaa cgcaaatgcc gtctgaacat ccgatttccg
    28321 gtttcagacg gcattttgcc tgaaccgcca catccgactg ccattccgaa aaatcccgat
    28381 ttcgtaccgt ccgtaccaaa aacagacatc ccgtccgccc cacatcatga ttccatccga
    28441 cttcattgac gagcttttag ccaaaaccga tattgtcgat attatcgacg agcaggttcc
    28501 gctgaaaaaa ggcggggcga actatatggc gtgttgcccg ttccacaagg aaaaaacgcc
    28561 gtcgttttcg gtcagtccga ccaaacagtt ttaccactgt ttcagttgcg gggcgcacgg
    28621 ttcggcgatt ggttttgtga tggaacatca ggggctgtcg tttccggagg cggtgcagtt
    28681 ccttgccgac cgcgtgggta tgattgtgcc taaagtgcgc gggcaaaacg ataatcccga
    28741 agtccgtgcc gagcgcaaga aaaaacagca gacgctggag gaaacgacgg ctgcggcagc
    28801 tgatttttat gcgcaacagc taaaattcaa tccggcggca aaagcttatt tggacaagcg
    28861 cggcttgagt gcagaagtta tcgcgcatta tggtttgggc tacgcgcccg acggctggca
    28921 gcctttggcg caagtgttcc aaccgtatcc gaataccgcg ttggtggata cggggatggt
    28981 gattgacaat gaggggcggt attacgaccg cttccgccat cggattatgt tccctatccg
    29041 caatccgcgc gggcaggtca tcggtttcgg cggcagggtg ctggacgact ccaaacccaa
    29101 atatctaaac tctcccgata cacctttgtt tgacaaaggg aaaaaccttt acggcttgta
    29161 tgaggggcgt gccgctgtca aggaagcgga gcggattctg gtggtcgaag gctatatgga
    29221 cgtggtcgcg ctggcacagt tcggcgtggg ctacggcgtg gcggccttgg gcacggcaac
    29281 aacagcggaa cacgtcaaaa tcctgatgcg tcaggcggac agtatttatt tctgtttcga
    29341 cggcgacagc gcggggcgca aagcggcttg gcgcgcgctg gaaaacgcgt tgccgcagtt
    29401 gaaagacgac aaatcgctgc attttttgtt cctgcccgag gaacacgacc ccgacagtta
    29461 catccgtgcc tacggcaaag cgcaatttga agacgcgctt ctgaatcaaa gcaagccttt
    29521 gtcggagtat ttctgggaac acctttcaga cggcattcat ctcaatacgc aggaaggcaa
    29581 ggcggaattg gtgaaaacca gttcgccgct tttggcgcag attaccgcgc cggcattggc
    29641 ttatttgtta aaacaacggc ttagcgaact ggtcggcatc gaccccgaca acctcgcgca
    29701 actgctagga caggaagcgc cgaagcggca cgtcaaacaa aaaaactaca aactgcctcc
    29761 gatttccgtc aaacagcccg tcatgctgac gctggtacag cggcaaatcc gcagcctctt
    29821 gataaatccg gattgggctg catatataga cctgcccgat tatctggcgt tggacggtga
    29881 tttcgcctgc cttgccaatc ttgccgaatc gattaaaaac catgccgccg tacccgaaac
    29941 cgctcaggtt ttagagtata tgcgcggctc gccttacgaa gaaacgataa cccgaatctt
    30001 ccattcaacg caccaatcgg aagaaatgaa cagcagcagt gaagaagatt gcgagaattt
    30061 ccaaatcggc atgaaaaaac tgctcaatga gttaaaatac agccaaatcg aagcattgaa
    30121 acaaaaaagc ctgcaatccg gcttaaatga aagcgagaaa aaacttttgc tgtcgttgct
    30181 gaccgcaaaa caaaattgac cggcggattc cgccacccgt aaacccgtta tgccgtctga
    30241 aaagcactta ccccggctgc aacaacgaca cctgcagaac acccatccca aaaagccttc
    30301 agacggcatc agagtacccg ctctgccacg ccttcaggtg cgttcaaacg caaaccgtcg
    30361 gcaccttacc aacagaaagc agacaatgtc cagaaaccaa aatcacgaag aatatcaaga
    30421 cgacacccgt ccgttaagca ttgaagagca acgcgcgcgc ctgcgtcagc tcatcatcat
    30481 gggtaaagaa cgcggctaca tcacctactc cgaaatcaac gacgccctgc cagacgatat
    30541 gtctgatgcc gaccaaatag acaatatcgt cagcatgatt tccggtttgg gcatccaagt
    30601 taccgaacac gcccccgatg cggaagacat attgttaagc gacaatgccg ccgttaccga
    30661 cgatgatgcc gtcgaagaag ccgaggccgc cctttccagt gcagattccg agttcggcag
    30721 aaccaccgac cccgtccgta tgtatatgcg cgaaatgggg caggtcgacc tgctgacccg
    30781 cgaagacgaa atcatcatcg caaaaaaaat tgaaaacgcc ctgaaaaata tggttcaggc
    30841 catctccgcc tgcccgggat ccattgcgga aatcttagaa ctcatcgaaa aaatccgcaa
    30901 agacgaaatc cgcgtcgacg aagtcgtaga agccattatc gacccgaatg aagtattgct
    30961 caacgaattg ggcttggggc acttggaaac cacagcgccc gagaaacctt ccaacgacaa
    31021 ttcggacgaa aacgaagacg acgaagaatc ggaagaagat gcggatgaaa tctcggcagc
    31081 caatctcgcc gaattgaaac aaaaagtcat cggccacttt gcccaaatcg aaaaagacta
    31141 caaaaaaatg attggccgtt tggaaaaaca ccacagccgg cacaaagact atctcgccta
    31201 ccgcgacgcg attgccaaca aactgctgga agtccgtttc gccacccggc aaatcgacag
    31261 cctcagcagc agcctgcgcg ggaaagtaga aaacatccgc aaactcgaac gcgaaatccg
    31321 cgacatctgc ctcgaccgcg tccatatgga acgcgactac ttcatccaaa acttcctgcc
    31381 cgaaatcacc aatctagaat ggattgaaga agaaatcgcc aaaggcaggg tttggagcga
    31441 cgcgctcgac cgcttccgcc acgccatcct cgaaaaacaa accgagttgg cggatatgga
    31501 aaaagaaacc cgcatttcca tcgaagagtt gaaagaaatc aacaaaaata tggtgtcgag
    31561 cgaaaaagaa accgcagccg ccaaacagga aatgattcag gcaaacttgc gcctcgtgat
    31621 ttccatcgcc aaaaaatata ccaaccgggg cttacaattc cttgatctga ttcaggaagg
    31681 caacatcggt ttgatgaaag cggtcgataa gttcgaatac cgcagaggct ataaattctc
    31741 cacctacgca acctggtgga tccgccaggc aattacacgc tcgattgccg atcaggcgcg
    31801 taccatccgc attccggtac atatgattga aaccatcaac aagatgaacc gcatctcgcg
    31861 ccaacacctt caagaaaccg gcgaagaacc cgattccgcc aaacttgccg aactgatgca
    31921 gatgcccgaa gacaaaatcc gcaaaatcat gaaaatcgcc aaagagccga tttcgatgga
    31981 aacccccatc ggcggcgacg acgattcgca cttgggcgac ttcatcgaag atgccaacaa
    32041 tgttgcgccg gccgatgcgg caatgtacac cagcctgcac gaagtaacca aagaaatcct
    32101 cgaaagcctg acaccgcgtg aggcaaaagt cctgcgtatg cgtttcggca tcgatatgaa
    32161 caccgaccac acgctggaag aagtcggcag acagtttgac gtaacgcgcg aacgcatccg
    32221 acaaatcgag gcaaaagcac tccgcaagct gcggcatccg acaagaagcg accgtttgag
    32281 aagtttcttg gacagcgaag acagcaagct gtaaaccaaa aaaccgcagg tttcaaatac
    32341 ctgcggtttt ttcttacaca ataaacaacg cttccacata tcccacactc ctatcccgag
    32401 acctttgcaa aatcccccaa aatcccctaa attcccacca agacatttag gggattttcc
    32461 atgagcacct tctttcagca aaccgcacaa gccatgattg ccaaacacat cgaccgcttc
    32521 ccactattga agctagatca agtgattgat tggcaaccga tcgaacaata cctgaaccgt
    32581 caaagaatcc gttacgtccg agaccaccgc ggccgtcccg cctacccgct gttgtccatg
    32641 ttcaaagccg tcctgctcgg acaatggcac agcctctccg atcccgaact cgaacacagc
    32701 ctcatcaccc gcatcgattt caacctgttt tgccgttttg acgaactgag catccccgat
    32761 tacagcacct tatgccgcta ccgcaaccgg ctggcgcaag acaataccct gtccgaattg
    32821 ctggaactga ttaaccgcca actgaccgaa aaaaacctaa aaatagagaa agcatccgcc
    32881 gccgtcattg acgccaccat tattcagacc gccggcagca aacagcgtca ggccatagaa
    32941 gtcgatgaag aaggacaagt cagcggccaa accacaccga gtaaagacag cgatgcccgt
    33001 tggacaaaga aaaacggcct ctacagactc ggttacaaac aacatacccg taccgatgcg
    33061 gaaggctata tcgagaaact gcacatcacc ccagccaata cccatgagtg caaccacctg
    33121 ttgcctttgc tggaaggcat taccgaaggc acgaccatct atgccgacaa aggctatgac
    33181 agtgcggaaa accgaacatc tggaagaaca tcagttgtta gacggca
//
LOCUS       DAWGBY010000009        32834 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.009, whole genome shotgun sequence.
ACCESSION   DAWGBY010000009 DAWGBY010000000
VERSION     DAWGBY010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32834
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.009"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(223..525)
                     /locus_tag="WHG62_000393"
     CDS             complement(223..525)
                     /locus_tag="WHG62_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEZ1724558.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIAEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
     gene            complement(497..784)
                     /locus_tag="WHG62_000394"
     CDS             complement(497..784)
                     /locus_tag="WHG62_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEZ1724559.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            864..1469
                     /locus_tag="WHG62_000395"
     CDS             864..1469
                     /locus_tag="WHG62_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724560.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSDYHEWDGKKWKIGKAAAAARFAEQKTATAFRLAEKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNAIETAPGLDALEKEIEEWTLNIG"
     gene            1448..1744
                     /locus_tag="WHG62_000396"
     CDS             1448..1744
                     /locus_tag="WHG62_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HEZ1724561.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            1741..1950
                     /locus_tag="WHG62_000397"
     CDS             1741..1950
                     /locus_tag="WHG62_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724562.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(2060..3203)
                     /locus_tag="WHG62_000398"
                     /pseudo
     CDS             complement(2060..3203)
                     /locus_tag="WHG62_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236971.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            complement(3492..4139)
                     /locus_tag="WHG62_000399"
     CDS             complement(3492..4139)
                     /locus_tag="WHG62_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HEZ1724563.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(4136..4504)
                     /locus_tag="WHG62_000400"
     CDS             complement(4136..4504)
                     /locus_tag="WHG62_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ1724564.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGDNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(4514..5185)
                     /locus_tag="WHG62_000401"
     CDS             complement(4514..5185)
                     /locus_tag="WHG62_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ1724565.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(5350..6069)
                     /locus_tag="WHG62_000402"
     CDS             complement(5350..6069)
                     /locus_tag="WHG62_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ1724566.1"
                     /translation="MATLTDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGYPEPFAICFDLISAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            complement(6153..7466)
                     /locus_tag="WHG62_000403"
     CDS             complement(6153..7466)
                     /locus_tag="WHG62_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ1724567.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPYYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            complement(7545..8417)
                     /gene="hpnD"
                     /locus_tag="WHG62_000404"
     CDS             complement(7545..8417)
                     /gene="hpnD"
                     /locus_tag="WHG62_000404"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ1724568.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLLRVRYGSFEELKLYCRRVAGVVGCLIARILGFSDDQTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            8588..10450
                     /gene="hscA"
                     /locus_tag="WHG62_000405"
     CDS             8588..10450
                     /gene="hscA"
                     /locus_tag="WHG62_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ1724569.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAKELQQI
                     RQGIADLQGRLKDGKAEDIRSAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            10663..11286
                     /locus_tag="WHG62_000406"
     CDS             10663..11286
                     /locus_tag="WHG62_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ1724570.1"
                     /translation="MFVNSLYKIGISDVSNFEGRMRHLENNGYANVAGLERILAVKTD
                     NYKEKENLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKNETAESEFEKSV
                     HERRQEGNAGSGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSKIRLFKEAYSRK
                     SGRRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAEGRKPQ"
     gene            11322..12092
                     /locus_tag="WHG62_000407"
     CDS             11322..12092
                     /locus_tag="WHG62_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ1724571.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKVPFFQDGEDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGES
                     VCVPVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVY
                     EEKEHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQA
                     MLEYGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            12147..12488
                     /gene="fdx"
                     /locus_tag="WHG62_000408"
     CDS             12147..12488
                     /gene="fdx"
                     /locus_tag="WHG62_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ1724572.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(12588..13181)
                     /locus_tag="WHG62_000409"
     CDS             complement(12588..13181)
                     /locus_tag="WHG62_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ1724573.1"
                     /translation="MNNALTAKLSKLVYTAPDNPDFLSKIGEFDRLILLVRRLYQMLD
                     EQNALSRLTLCIRCQNQRGLIVLDGARADSDAATIRMKRWHIYTQIAERMANRYDQIS
                     VTVENETANPTQLEQYYLDIADKTIALFGLKEAKLQQQEYPEDKTQQQSILKKLSEKP
                     GRNLSMINTKAKIEQYAANQTQTPLKITRQRFICRPN"
     gene            13258..13455
                     /gene="iscX"
                     /locus_tag="WHG62_000410"
     CDS             13258..13455
                     /gene="iscX"
                     /locus_tag="WHG62_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ1724574.1"
                     /translation="MKWTDTQRIAEDLYDLHGETIDPKTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(13523..13924)
                     /locus_tag="WHG62_000411"
     CDS             complement(13523..13924)
                     /locus_tag="WHG62_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ1724575.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            14135..15094
                     /locus_tag="WHG62_000412"
     CDS             14135..15094
                     /locus_tag="WHG62_000412"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ1724576.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQVSQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            15162..16472
                     /gene="tilS"
                     /locus_tag="WHG62_000413"
     CDS             15162..16472
                     /gene="tilS"
                     /locus_tag="WHG62_000413"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ1724577.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPTVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEVVVQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            16546..17331
                     /locus_tag="WHG62_000414"
     CDS             16546..17331
                     /locus_tag="WHG62_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ1724578.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEGKMPSEEVRRLRAVVPEGKVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLARYKGRVFATALREEKQAVLYGEDLCGPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            17341..17538
                     /locus_tag="WHG62_000415"
     CDS             17341..17538
                     /locus_tag="WHG62_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724579.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            17800..18153
                     /locus_tag="WHG62_000416"
     CDS             17800..18153
                     /locus_tag="WHG62_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724580.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRFVVIANSAWGPLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSAHKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            18165..18470
                     /locus_tag="WHG62_000417"
     CDS             18165..18470
                     /locus_tag="WHG62_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724581.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPKENMHKDASNTGAKTH"
     gene            18532..19908
                     /gene="mpl"
                     /locus_tag="WHG62_000418"
     CDS             18532..19908
                     /gene="mpl"
                     /locus_tag="WHG62_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ1724582.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SKSPFFVIEADEYDTAFFDKRSKFVHYRPRTVVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIICNGQQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     TAGRVKWDLMGRHNRMNALAVIAAARHVGVGIQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRIGGARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNAEAGDHILVMSNGGFGGIH
                     GKLLDALR"
     gene            20115..21167
                     /gene="bioB"
                     /locus_tag="WHG62_000419"
     CDS             20115..21167
                     /gene="bioB"
                     /locus_tag="WHG62_000419"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ1724583.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLELVHQAA
                     EVHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(21246..21880)
                     /locus_tag="WHG62_000420"
                     /pseudo
     CDS             complement(21246..21880)
                     /locus_tag="WHG62_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
     gene            22088..22228
                     /locus_tag="WHG62_000421"
                     /pseudo
     CDS             22088..22228
                     /locus_tag="WHG62_000421"
                     /inference="COORDINATES: protein motif:HMM:NF021127.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
     gene            22203..22463
                     /locus_tag="WHG62_000422"
     CDS             22203..22463
                     /locus_tag="WHG62_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ1724584.1"
                     /translation="MTKAVRRKNVQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(22526..24385)
                     /gene="ilvD"
                     /locus_tag="WHG62_000423"
     CDS             complement(22526..24385)
                     /gene="ilvD"
                     /locus_tag="WHG62_000423"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ1724585.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHVGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTHAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVEHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(24558..26327)
                     /gene="cysI"
                     /locus_tag="WHG62_000424"
     CDS             complement(24558..26327)
                     /gene="cysI"
                     /locus_tag="WHG62_000424"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ1724586.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDESGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSGDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILSELDDLIGKWAAGRDTDEGFGDFAIRTGI
                     VKPVLDAPVDFWDASKAVPIARA"
     gene            complement(26354..28168)
                     /locus_tag="WHG62_000425"
     CDS             complement(26354..28168)
                     /locus_tag="WHG62_000425"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ1724587.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPAAEPFSVTVLSASQTGNAKSVADKASDSLEAAGIQVRRAELKD
                     YKAKNIADERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDRRFEELGAKRLLERVDADLDFAAAADGWTGRIVARLKEEAAKNRATP
                     APQTTPPAGLQTAPDGRYCKADPFPAALLANQKITARQSDKDVRHIEINLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYAPFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(28165..29451)
                     /locus_tag="WHG62_000426"
     CDS             complement(28165..29451)
                     /locus_tag="WHG62_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ1724588.1"
                     /translation="MTAQHQAPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNLVYPGGNMPWYRGEPLLVIL
                     ENLPGADETGRSAADFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(29490..30413)
                     /gene="cysD"
                     /locus_tag="WHG62_000427"
     CDS             complement(29490..30413)
                     /gene="cysD"
                     /locus_tag="WHG62_000427"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ1724589.1"
                     /translation="MTKTEPNNVQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPAEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(30451..31185)
                     /locus_tag="WHG62_000428"
     CDS             complement(30451..31185)
                     /locus_tag="WHG62_000428"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ1724590.1"
                     /translation="MKIFKPALWKIPPIENGSETALAEKTETLKQRLHRIAGSHRDAR
                     FASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRFQP
                     IREDALHYVESKGRFAFYDSVEARRECCRIRKTEPLDRAIAGADAWLTGQRREQSATR
                     TELPFAEYDAGRGIDKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCTRP
                     VKAGEDIRAGRWWWEDKNSKECGLHK"
     gene            complement(31201..32661)
                     /gene="cobA"
                     /locus_tag="WHG62_000429"
     CDS             complement(31201..32661)
                     /gene="cobA"
                     /locus_tag="WHG62_000429"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ1724591.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGSVAARKISLLLDAGAQVRVVANQ
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFQLAESCQKPVNV
                     VDDRDYCSFIFPSIINRNPIQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKGKLKSVTERRRFWEKQFNGRFATLVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGE
                     RTPQEDTNALMVRLAREGKRVVRLKGGDSFVFGRGGEELEVLARHHIPFSVVPGITAA
                     IGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGTLKAAQI
                     AERLQQYGRPPDTPAAVISHGTQSTQSTAIGTLANLARLAENAPKPALIVVGEVVELH
                     EKLAWFGENAKKASNPAEHAYFALDGLGTGQEQQAA"
BASE COUNT         7199 a         8597 c         9361 g         7677 t
ORIGIN      
        1 gaacggactg gattcccgcc tgcgcgggaa tgacggcggc aggggtttcg ggattcccgc
       61 cttcgcggga atgacggaaa gtggcgggaa taacgaaagg cgggaatgac cgcgcaaaaa
      121 gccgctgccc ccttcggacg gcaccggcaa caaaaaaccg cacggccgaa accgcgcggg
      181 aaaggatagt cgggcgcgcc cgataagcag cggccgcccc cgttatttca attgggcgac
      241 atattggcgc aaaacctcgt tgatgcgcgt ctgccagccc ttgccgccgg cgcggaattt
      301 ttcgaccaca tcggcggaca ggcgtatggt aacgagttgt ttcggggttt tgcctgtgtt
      361 tcgtttttgc attacgccct tttcttccaa ttgtttttga tgggaaaaaa gcacctgtgc
      421 caagtcttcg ggcagggctt cggcaatggg gcgggcaagc gcaaaatctt cggcggcaag
      481 ttcccgcact tcgccgtcag cgtttgttaa ggattgacgt tgcatatttt ttaacctctc
      541 ttttattcgc tttgcgaaaa ctgatgacac ggatgccgtc ttttatcggc gtaaaacaga
      601 caatgtgcag gcgttgcgta tcgcctagat aagcagcggc aacataacgc ggttcggggt
      661 aatcaaagca gacatcgggc acaataacgg ccgttgtcca gcgtatttgc ccgactgatt
      721 caaagggcaa attccgctct tcgatattgc gttgattttt ttcggagtca aattcaatct
      781 tcattgcagc ttgcagcgta ttttgtcgtt acattataag cggcaaaaaa ccaaaatgta
      841 aatacaaaaa aggaaacccc gaaatgacca tctatttcaa aaacggcttt tacgacgaca
      901 ccttgggcag catccccgaa ggcgcggttg ccgtccgcgc cgaagaatac gccgcccttt
      961 tggcaggaca ggcgcagggc gggcagattg ccgccgattc cgacggccgc cccgttttaa
     1021 ccccgccgcg cccgtccgat taccacgaat gggacggcaa aaaatggaaa atcggcaaag
     1081 ccgccgcagc cgcccgtttc gccgaacaaa aaaccgccac ggcattccgc ctcgcggaaa
     1141 aggcggacga actcaaaaac agcctcttgg cgggctatcc ccaagtggaa atcgacagct
     1201 tttacaggca ggaaaaagaa gccctcgccc ggcaggcgga caacaacgcc ccgaccccga
     1261 tgctggcgca aatcgccgcc gcaaggggcg tggaattgga cgttttgatt gaaaaagttg
     1321 tcgaaaaatc cgcccgcctg gctgttgccg ccggcgcgat tatcggaaag cgtcagcagc
     1381 tcgaagacaa attgaacgcc atcgaaaccg cgccaggatt ggacgcgctg gaaaaggaaa
     1441 tcgaagaatg gacgctaaac atcggctgaa aaaatacgtt taccacctgt tggtagccat
     1501 cgaccaactg ttcaacgccc taaccggcgg cgcggcggac gaaaccctct caagccgcac
     1561 ctatcgcggc gcgcggctcg cccaaaagcc caaaacccgc tggaaggttt tatataccct
     1621 gatcaacggc gtatttttcg accgccaaca ctgccggcag gcgtatatca gcgaactgaa
     1681 aggcaggcag cacgacgcgc ggttcaacca aagccgcgcc gccggggaaa aggggacgcg
     1741 atgaactact tcggcatggt agagtttctg cgcctgatgg caatggtgcg gccgccattt
     1801 gtcttcttct ccggcacccg cagcgaactg cctacttatc ttgacctcgt ggcagaactg
     1861 cgcctgaccg gatgggagcg ttttgcaggc agccaaacct tgactgtgag cagcacatca
     1921 acagcaattc aagctacgac gaccacctga tttataagtt ctgaccgcaa gtagcgtact
     1981 acttttaaag gcataagata atccccgttt aacagaccat taaacgggga taaatttgtg
     2041 caaaagctaa tacaatttcc tacgcttcgg cggtgcaaaa gctgccgcca attcgtgcaa
     2101 aagctgccgc cgccttacat tccagtgcaa tgccgtctga aacttcgcta atctcgggtt
     2161 gccgcgcgct gtgttgttct tcggtactca gcaaaaagcc gtacagacgc tccaatcggg
     2221 cggggtaggc ggtgaatttg ttgtagaaca tccggaaaaa agatagcgcg ttttgcagtc
     2281 gcgcaaaggc ttggacggtc tgctggatgt cgccgatttt gatttgtccg gcaaacaggc
     2341 gcggcgcttg caaaataatg gggaagagtt tgatgccgtt ggtgaacata tcgttaaagc
     2401 cgcttaagca gacgctttgc cgcgcgatgc gccaacggtt gcggataatg gctttaaagc
     2461 ggtcggaaag ccggccgtgt tcgtgttgtt cgccgttgta aaacgctacg ctttcggcgt
     2521 ggtcgcgtac gcggataagg gaataacggt agtcgccgtt gagtttttcg ttttcatagt
     2581 tgtaacgaat caaggggttg cctatccaca tcgcgataaa ggtcgccaaa atcacaaaaa
     2641 taaagacgag ccaaacaatg ccgcgcggaa tgtcgaagcc gaacacggtc aggatgccag
     2701 ccaagccccg caaaacaacg gcaaattcca gagaagtaac gaccgaattg accatgccgc
     2761 gcacaaattc gatggtcgaa gcgataaatt cctgcgcgtc ctgttggata cgctggtcga
     2821 tgttgtctgg cgcgtggcgg cgcatttgca ggcggtagta gtttttgtcg gcaagccagc
     2881 gtgctgtcag cacttcgttg agccgctccg accatttaat cgccaagcct tgatcgagga
     2941 agtcgttgac gacgttgtta aacgcccgta tcagcaccac gcccgcgttc attgcagcaa
     3001 acatccaaaa tgccgaagca tttcaaatcc tgcatcgagt cgtaaagccc tttggacata
     3061 aaggtactca acacattcag ccgcatttcg gttaacacca gcgtaatcat cgccgtaatc
     3121 agcagcaaga ctttgaccgc gcttttcagt gtcagacaaa gccaaagcgg tgtggaataa
     3181 agctcggttt gccatttctg catgggaaat ttcttacggt atcaatgccg tctgaaaaag
     3241 acgggttcag ttgatttttt gatgaagttt ggggaagttt tgcaggtcag ggcatattgc
     3301 gtgttaattt accatacaac cacgccggaa ttaagtttaa atttgaataa aaggttcggg
     3361 ttctgcaaaa tacagaaccc gaaccttgtt cggatattga aaccggccgc ccgattttgg
     3421 gcggtgcggc ttgcaagtat caagattcgc atatgccgtc tgaagctcgg agaggttcag
     3481 acggcatatg cttatttggg ctgctcttcg acgaatctcg gacctttcaa gatgccgttg
     3541 tgagaatagg gcgacagcag gttgtatgcg gcggttttgg aaacctgata accgcggtcg
     3601 gtcaggctgt tggcaatctg attgaccact gcgctgacca aagcccccaa caggccgctg
     3661 ttgctgttgt tgctgccttc gcggatgctg gccgaacccg accacaactc ttttccgttg
     3721 cgggaatcga ccagccgtgc tttggcggat acggtcgtca cgctgtctaa aatttgatat
     3781 gaagtgccgt attcggtaac cgtaatgtac aaaaccgcat cattgccgaa aatctgatgc
     3841 agtttttccg gccggacggc gtgaatatcg gcggcattgg tcaagccgtt ttgtttgaag
     3901 gtttcctcca cgactgcggc ggggaagacg taatagccgg cttcggaaag cggcgcggcg
     3961 gtcgaagcca gtacacccca tgttccgttg acatcgggcg attcgttcag cggcggaacc
     4021 accaaaattg aagccggttt gctttccttg aatgacgtgt agtcgaaatc gggagctttt
     4081 tgaacttggc aggcagacag cgccaacacg gcggcaagcc ctaaaatcaa aggtttcatc
     4141 gcttgcctcc tttaccggtt ttcatcagga agtccataaa tacgcccgat tcgggaaaca
     4201 gccttttctc ttcttcaaac tggcggaacg cgccctcttt gtctcccgaa cgggaaagca
     4261 gcagtcccag atgggcgtgc gcacccgggg cggcattcat ttttttgttg ccggcttcca
     4321 caaagtattt ttccatcttt tcggtctgct tgcccaacga agtgtcgtcg tttttcaaac
     4381 cttcatagac ggtatcggga tagccgccgt aataatacag ggatttttgc ccgttgtcgc
     4441 cgcaggcggt cagagccaag accgccgcac acagcgacaa acggctcaag gttttcggat
     4501 tcatcatttc tccttaacgg ttgggttgcc atgcgccgtt gtcaacagcc tgaaccaggc
     4561 tgttgacggc ttcgcggatt gccaagtcta aaactttgcc gttcaaagtc gcatcgtagc
     4621 cggaagtgcc gccgaaaccg atgatttcac ggttggaaag tgcgtattcg cccgcgccct
     4681 gtgcggaata gacgatttcg gaagtattga cgttgacgat attcagagcc acttttgcat
     4741 aggcgatttg cgatttgccg cgacccaaaa tgccgaagag ctgatgatcg ccgacatctc
     4801 tgcgtccgaa ttcggttaca tcgccggtaa cgacataatc tgcgcctttc aggttatgcg
     4861 ctttgccgga aatgccggat tcctgtttta atgcgttcaa attggtgcgg ttcagtacgt
     4921 tgaagcggtt ggtctgttgc aggtgcgtta ccagaatggt ttttgcctgg ctgcccaaac
     4981 ggtcttcccc gtcggagaaa atgccttttt ggaagctgga gcggttgtcg aatgttccga
     5041 cggaaatcgg ggtacgaaca ccgtgatatt gcgtattgta ggaggcgact ttctctacct
     5101 cgagactgcg tgaggattcg gtcgcacagc cggtcagtga aacggcagcg gcggcaagga
     5161 caacggcggt ggaaacggtt ttcataaaat ttaccctaag gtcaagttaa ggaaataacg
     5221 ggttgtcatt attgtcctta tgtaaattta agtcaaggtg tttgtctgtg cgggacggat
     5281 gcgcgcggaa ggtacggata tttttcaaac ggaatcgcgg cgcgggcggg atgcctgcct
     5341 tttccggatt tagaggtaaa cgatttcgcc actccgccct ttgctttcgg cacttgccca
     5401 ccagacaaat gcgggcagca cgtccccgta gcttttgcgt tcgcttttgg cttcgcccgg
     5461 atgggatttg atgcgttgcg gggaattgat ggggccgggg acgaggacgt tggcgcgcag
     5521 gttgccgaag cgttcccatt cgtcggcggc gactttgcac aggtagttca acgcggcttt
     5581 ggacgcgccg aagccgcccc agtaggcttt gggtgtttcg ccgtggcttt cgccgacgaa
     5641 gatgacggac gcgtcgggcg actgcttcag cagcgggaac agggcgcggg tcagccccat
     5701 aggtgcgacg gtgttgatgc ggtattggtt gacccattcg gcgacggttt ggaaatccag
     5761 cggcgagagg gcgtaaaaat agccggcgca gtggacgatg ccgtccagtt tgccttgcgt
     5821 ggcttcggca atggtggcgg cgaactgatt gaattctttt tcttccgcgc taataaggtc
     5881 aaagcagatg gcgaatggtt cggggtatcc ggcttcgaca atcgcgtcat acactttttc
     5941 cagttttttc tgatgacggg caaccaaaat cacagtcgcg cctgctgccg cataggcttt
     6001 ggcaacctgt tcgcccagcc cttgcgatgc gccggtaact aagatggttt tgtcggtcag
     6061 tgtcgccata ctttttcctt tttggtggtc ggtcgggggt attttagcgt tttgccgcac
     6121 cttgtaaagc gtcctgatgc cggccggcgt tttcagacgg catcgttcag gctttgcagg
     6181 caggcttccg cggaagcgaa acctgattgt acggcggctt cgagcgtggc ggggtagtat
     6241 gggtggaggt agtcgccggc ggggaagatg cggtgccggt gcagccacga caaatccggt
     6301 ggtggggcat cggctgcggt tgtggcgcgt ttttcggtga tgacgcgcac ggcttcgggt
     6361 tcgcccaaat gcggaaggat gcgtttgagg tcggcgtggg ctttgtccgc ccacgcccgg
     6421 tttgcaaacg cgccgacgcg gtcggaaacg ctgatgacgg cggacacttc gttttcaggc
     6481 agtccgagcc tgccccggca aagcagccat tgcaccgtgc cgtcggcaag gccggtcagc
     6541 ggggcgggca ggcggacggg ttcggcgtag cgcagataga cggtggtgat ggcgtgatag
     6601 cgaaggtttt gatatgccgt ctgaacgtgt tcgggcgtgc cttcgggcag gagcgcggcg
     6661 gcgtggtagg gcgcggtggc ggggacggcg gcatcgaaag cttcgccgtt gacgagcact
     6721 ttcccgtccg ggagggggtt cagacggcat acgcgcgttt cgaggcggat gtccgcgccg
     6781 agccgttgaa gctccgccaa ggcgggttcg gcgacgattg cgcccaaatc ctgcttgggt
     6841 aggagatagt cgctgccgga ttttttcgtc agcacgccgt cggacaaaac gttgcacaac
     6901 acgcgcaggc ttgcggtttc caaaggcgtg ttgagcgcac cccacaccag cggctgccaa
     6961 aactgcatca cggcggcacg cggcacgttc cgctgtttca gccattgtgc aactgtcgtg
     7021 tcgggctgtc cgaggcgtgc ggacttctgc aaatcggaca tatcggcaag cagtttggct
     7081 ttgaatgcag tcggtgcacg ccgggcaagc agcacgccgc ccaaaatatg cagcggcgcg
     7141 ggcaggggga gggcgcggaa ctgcaaaccg ccgtgcatat gccagtgcag cggtacgcgc
     7201 aaaaaggcgg cacggggatc cgaaccgatg gttttcatca ggcgcaacac gccccggtat
     7261 gcgccgagca aaatgtgctg cccgttgtcc aaaaaaccga aaccgtcggt atttccggcc
     7321 agtgtgcgcg ccctgccgcc cgcctgccgg ccggcttcaa acagggtaac gtcggcgtgc
     7381 cgcgccaagg tgacggcggc ggacagtcct gcccagcctg cgccgatgac ggcgattttc
     7441 gggcgcggat gcggcgtgtt catcatttat tcctccaatg gttgaaaccc cgtttttcgg
     7501 ggcggcgggg gttgggtttt cctgaagggc gggcggtatg cgccttatgc ccgttccggc
     7561 gtgccggggc gcggtttgaa tccgaataac caggttttca gggcaatgcg ttttttgcgc
     7621 ggcgaaggga gggcgatttt gtatttgagg acgttttgcg cgccgtcccg gtcgatttcg
     7681 tttaaaagcg cgtaataaac cgccgccatg accagtccga ctttttgggc ttttttatcg
     7741 gcatcaggca gcagcgatac ggcttcgcgg taggtttcac gggcgcgttt gatttggaac
     7801 gccatcaatt cggcaaaatt gcccgtcggg ctgcattgca aaatcacgct tgcggggaca
     7861 tcaaaccgcc gcatttcctc catcggcagg taaatccgtc ccctgcgcgc gtcttcgccg
     7921 acatcgcgga tgatgttggt cagttgcagc gcaagtccca tcttgtcggc gtattccagc
     7981 gtttggtcgt ctgaaaaccc caaaatccgc gcaatcaggc agccgaccac gcccgcgacg
     8041 cggcggcaat acagttttaa ttcttcaaaa ctgccgtaac gcacccgaag caaatccatc
     8101 tgcatcccgt cgattaaggc ttccagttca tatttcggca gcttgaaggt ttccttaact
     8161 tgccgcaagg cctgattgac ggggtgttcc ggcatcgcgc cgccgaatac cttgtccaaa
     8221 tcgccgcgcc accagttcaa tgtcgcctgt gcaacatcgg ggttggaaca ttcgtcaacc
     8281 acatcgtcca attcgcggca aaaagcatat aaaaccgtta ccgcatcccg tttttcctga
     8341 gtcaggaaac ggaagcccga caaaaaactg gagcggcttt cttctgcttt ttggcggcaa
     8401 tagtcgagtc ctttcacgat ttatattcct aatgatgggc gggaaaggcg gattttatcg
     8461 gcatttggcg gtagagggca atttcggcgg cacgacccaa tccttagcgg tttgctcaac
     8521 tatcggcgca aattctgtta aaatgccgct ttccttcctt tacacaccgc accgacaggc
     8581 agaatttatg gctcttttgc agatttcaga accgggtatg tccgccgccc cgcaccggca
     8641 ccgtttggcg gcaggcatcg atttgggtac gaccaacagc ttggtcgcca ccgtccgcag
     8701 cggcagtgcc gcctgtctgc ccgatgccga agggcgcgtt accctgcctt ccgtcgtccg
     8761 ctatctggaa aacggcggca ttgaagtcgg caaaaccgcc ctgtccgccc aaaaaaccga
     8821 cccgctgaac accgtcagct ccgccaaacg ccttatcggg cggacgcttg ccgatctgca
     8881 tcaaaatacg cattacctgc cttaccgttt cggcgacaat caacgcgtta tcgaactgca
     8941 tacgcggcag ggggtgaaaa cgcctgtcga agtgtcggcg gaaatcctca aaacccttaa
     9001 atcgcgcgcc gaagaaacct tgggcggcga tttggtcggc gtggtgatta ccgtccctgc
     9061 ctatttcgat gatgcccaac gccaagccac caaagatgcc gcgcgtctgg cgggtttgaa
     9121 cgtattgcgc ctgctcaacg aacccaccgc tgccgcaatc gcctacgggc tggacaacgc
     9181 ctcggaaggc acgtttgtcg tgtacgactt agggggcggc acattcgacg tatccgtatt
     9241 gcaactgacc aaaggactgt ttgaagtcaa agccaccggc ggcaacagcg cgttgggcgg
     9301 cgacgatttc gaccaccgcc tgttctgccg cctgctcgaa caaaacggac tctcccaact
     9361 caacgaacaa gacagccaac tcctgctctc gctcgtccgc gccgccaaag aacaattaac
     9421 cacgcaaacc gaagcgcgca ttcaggcgac gctttcagac ggcatggcaa tcgacacaag
     9481 catcagtcgc gccgagttcc acaacctgac gcagcatttg gtgatgaaaa cgctcgaacc
     9541 ggtcacacag gcgttgaaag atgccggtgt cggtaaaaac gaagtcaaag gcgtgattat
     9601 ggtcggcggt tcgacccgta tgctgcacgt tcaacaagcg gttgccactt tctttggtca
     9661 aaccccgctg aacaacctca atcccgacga agtcgtcgcg ctcggcgccg ccatacaggc
     9721 aaacgtcctc gcaggcaaca aaaccgacgg cgaatggctg ctgctggacg ttacaccttt
     9781 gtcgctcggt ttggaaacct acggcggctt ggcggaaaaa atcatcccgc gcaattccac
     9841 catccccacc gcgcgcgcgc aggactttac caccttcaaa gacggtcaaa ccgcgatgac
     9901 gatacacgtc gtgcaaggcg agcgcgagct cgtttctgac tgccgcagcc ttgccaaatt
     9961 caccctgcgc ggcattccac cgatggcggc gggtgcggcg cgtatccgcg taaccttcca
    10021 aatcgatgcg gacgggctgc tgtccgtttc cgcccaagaa caaagcaccg gcgtacaggc
    10081 gcaaatcgaa gtcaaacctt cctacggctt ggacgacggc gcgattaccc gaatgcttaa
    10141 agacagtatg gacaacgccg ccgaagatat ggcggcacgc gcccgcgccg aagccgtagt
    10201 cgaagccgaa agcctgaccg atgccgtcaa cgccgccctc gagttggaca gcgatttact
    10261 ggatgccaaa gaattgcaac agatccggca aggcatcgcc gatttgcaag gccgtctgaa
    10321 agacggaaaa gccgaagaca tccgctccgc cgtcgccaaa ctcagccgca gcaccgacaa
    10381 cttcgccgcc aaacgcatga accgcaatat ccaacgagca ttgacaggcc agagtgtcga
    10441 taatatttga tacttaaacg gtttcagacg gcatagatat aacctgatgc cgtctgaagg
    10501 ctcgaaaaca cttgaaaaac atcgatatgg aaaagtcagg cattgtctat tcgatgaaaa
    10561 ccgtcatcaa gggcgtgtat agtgaattaa atttaaaccg gtacagcgtt ggctcgcctt
    10621 gccgtactat ttgtactgtc tgcggctcgc cgccttgtcc tgatttttgt taattcacta
    10681 tataaaatcg gcatttcgga tgtaagcaat tttgaaggca gaatgcgcca tttggaaaac
    10741 aacggctatg cgaacgttgc cggattggaa cgcatcctcg ccgtcaaaac cgacaattac
    10801 aaagaaaaag aaaacctgct ccatgaaatt ttcagcaaaa gcaggatagg cgataccgaa
    10861 ttgttcgccg tggacgaaaa ccttgtaaaa cgtttgtttt tatcgcttcg cggcgaaatc
    10921 gtgtttccga aaaacgaaac ggcggaatcg gaatttgaaa aaagcgtcca cgaacgcagg
    10981 caggaaggga atgccgggtc cggccgcaaa caactgcttg atttggtacg gcgcggacac
    11041 cgggaatacc cttacgcgct gccccggctt ttggcgggcg cggcatccta caagccgaaa
    11101 aaatcgaaaa tccgcctttt taaagaagca tattcccgca aaagcggcag gaggctgacc
    11161 gacgaaattg cagacggcat ccatatttac acctgttttt cgcgggcgga tttggaaaaa
    11221 gcctattccg aatatttgga acttttcaaa tccgaatcgg atgccgaagg cagaaagccg
    11281 cagtaaggtg caaacagata ccgtacacgt tgaggagcaa tatgatgggc gattccgtca
    11341 tttattatgt agaacaggca gacgaaccgg taaaccgtgc cggcgaacgc gcccgcaaaa
    11401 cattcaaata cttttggcgc gagctttttt gggaacgccg ccgcatcatt cccgccctgg
    11461 attttgccat ggtcaaagtc ccttttttcc aagacggcga agacggcgaa gacggcgaaa
    11521 tttgcgaaca tatgtggatc gacgatattt attttgacgg tctttacatt tatggcgtgc
    11581 tgaacaatga acccggcgaa ctgaccaatg tcgaacaagg cgaaagcgtt tgcgttccgg
    11641 ttgacgacat cagcgactgg atgttcgtgt gcaacggcat tccctacggc ggctttacca
    11701 tacaggcaat gcgtggacag atgacggaag aggagcgtac cgaacacgat gccgcatggg
    11761 gaatcgattt cggcgatccc gggcaggtat tgctggtgta tgaagaaaaa gaacatcccg
    11821 aaaatctgga agagcatccg atgtgccgga actgtattga cgattttcgg caacagttgt
    11881 cccaaaatcc ggattttctg catgagcagg acgaagacgg ctatacgccg cttcatcatg
    11941 aagccatcgc aggaaatgca cttatggttc aagccatgct tgaatacggc gcaaatcctg
    12001 cctcaaagac atcggaaggc tataccgccc tcgattttgc ccgcctggcg ggctggcaaa
    12061 atgttgccga cctgctcgaa ccgcgacatt aggcggacag ttttccgaaa acgaacacaa
    12121 acacttttta cagaaagaca ataaaaatgc ccaaaatcac cgtacttcca cacacgacat
    12181 tatgccccga aggcgcggtt atcgaagacg cgcccgaagg caaaaccgtc cttgacgtgc
    12241 tgctcgacca tgatatcgaa gtcgatcacg cctgcgaaaa atcctgcgcc tgcacaacct
    12301 gccacgtgat tatccgcaaa ggtttcgaca gcctggaaga gccgaccgaa ttggaagaag
    12361 acctgctcga tcaggcttgg ggtttggaag ccgattcgcg cctgagttgt caggcggttg
    12421 tcgccggcga agatttgatt gtggaaatcc ccaaatatac tatcaatcat gcccgagagg
    12481 agcattgacg caatgccgtc tgaaacatca tgcggttcag acggcatcgg atatgcataa
    12541 gccggagcag aagggtaatc ccgtatttga taagggtaaa ccggagttta gtttggacgg
    12601 cagataaacc gttgtcgggt aattttcaga ggtgtttgtg tctgatttgc cgcatattgc
    12661 tctattttgg ctttcgtatt gatcatactc aggtttcgac cgggcttttc ggatagcttt
    12721 ttcaatattg attgctgctg cgttttatct tccggatatt cttgctgttg cagtttcgct
    12781 tccttcaatc caaaaagagc gatagtttta tcggcaatat ccagatagta ttgttcaagt
    12841 tgggtaggat tggcagtctc attttcaact gttacggaaa tctggtcata acggtttgcc
    12901 atacgttcgg caatttgggt ataaatatgc caccgcttca tacgtattgt tgcggcatcg
    12961 gaatcagccc gtgcaccgtc taggacaata agccctcttt ggttttgaca gcggatgcaa
    13021 agtgtcagcc gggaaagggc attttgttcg tcgagcatct gatacagtct gcggaccaat
    13081 aggatcagac ggtcaaattc ccctatcttg gaaaggaaat caggattgtc cggagcggta
    13141 taaaccagtt tggaaagttt ggcggttaag gcattattca ttcagctatc cttggcgggt
    13201 atacatttgg aacatgttct atacggttga aagaccggaa aatacaggaa aattaatatg
    13261 aaatggacag acacacaacg tatcgctgaa gacctttacg acctgcacgg cgaaaccatc
    13321 gatcccaaaa ccgtgcgctt tacccaactg cgcgacctga ttatggcatt gcccgaattt
    13381 gacgacgacc ccgcccgttg cggcgaacgt attctcgaag ccgtgcagca ggcatggata
    13441 gacgaggcag aataagtttc gggaatgccg tctgaaatac ggcggtacgc ggttcgtgct
    13501 tctgtttgca gtgggaacgg ttttaccagt ctcctttttt cagcctatcc agttggcggc
    13561 ggtcgcgctt ggtcggtctg ccgtcgggat gggcggaagt gatgcggctg aattggtcga
    13621 gctgtttgcg ctcttccctc aatgctgccg tttttgcgtc ttcttcatac agaagccgcg
    13681 cctcggatgc cgggcggcgt tggtggttca aacctttaac cttgatttta tagggaaggg
    13741 aattgagcgt caggtcgata atatcgccga tgtctatggt tttactgttt ttgaccttcg
    13801 agccgtttac ttgaacccta cccagttcga tgtgcttttg cgcaagggaa cgggtcttga
    13861 aaaaacgtgc cgcccaaagc catttgtcca gccgcatggc ggaagaatcg tgcttgtctt
    13921 tcatacgatt ttgtttgaaa taattgaatt tgtttcaagt ttagcataag atacgccgcc
    13981 tataactagt atatatgcac taatccactg ttttccatgc tgtccgaaca caaaaagagg
    14041 gtgtggaaaa gccgttttgg acaataaatt aactgcggaa tatgcacaaa tagcgtatga
    14101 tagcggcaga atctgttgat gagagcttca ttctatgaaa cctgtttttt tggattttga
    14161 acaacccata gccgaactga ccaacaaaat cgatgagctg cgtttcgtcc aagacgagtc
    14221 tgccgtcgat atttcggacg aaatacaccg tttgcagaaa aaaagcaacg acctgaccaa
    14281 atcgattttc agcaaactta cgcccgccca ggtttcacag gtttcccggc atccgcagcg
    14341 tccctatact ttggattaca ttgatgcgct gtttactgat tttgaagagc tgcacggcga
    14401 ccgccacttt gccgacgatc atgcgattgt cggcggattg gcgcgtttca acggacaaag
    14461 cgtgatggtc gtcgggcatc agaaagggcg cgacaccaaa gaaaaaatcc gccgcaactt
    14521 cggtatgccc cgtcctgaag gctaccgcaa agccctgcgc ctgatgaaga cggcagaaaa
    14581 attcggcttg cccgtcatga cctttatcga tacgccgggc gcgtatcccg gcatcggcgc
    14641 ggaagaacgc gggcagtcgg aagccatcgg caaaaacctg tacgaactga cgcgcctgca
    14701 cgtccccgtt ttgtgtaccg tcatcggcga agggggctcg ggcggtgcgt tggcggtcgc
    14761 cgtaggcgat tacgtcaata tgctgcaata ctcgacctat tctgttatct cccccgaagg
    14821 ctgcgcttcg attttgtgga aaaccgccga aaaggcggcg gatgcggctc aggctttggg
    14881 cattactgct gaccgcctgc aaaagctgga cttggtcgat accgtcatca aagaaccatt
    14941 gggcggcgcg catcgggatt ttgggcaaac catgaaaaac gtgaaagccg ttttggaaaa
    15001 acaactgcac gaagcgcaaa gcatcccgct tgccgatttg ctttcgcgcc gtttcgaccg
    15061 cattatggct tacggcaaat tttcggaaca ataattcagg tagaacaagc agcaagcagt
    15121 ttgtctgaaa ctgcttgctt tttctttatc gggacggaac cgtgctgact ttagatgcgt
    15181 ttgagcaatg cttgaaggat tgttttcctc aaggtctgaa tggaaaaaaa acagcggtgg
    15241 cattaagcgg cggcttggat tccgtcgttt tgctgcatct gcttgtccgc gccggaaaaa
    15301 agggcggttt tattccggat gcattgcata tccatcacgg cttgagtccc cgtgccgacg
    15361 attgggcaga tttctgccaa aactattgcg atatgctcgg ggtggggctg gaaacggtta
    15421 aggtctgcgt ggaaaaaaac ggtttgggca tcgaggcggc ggcgcggcaa aagcgttatg
    15481 ccgcgtttgc cgaaaaaggc tttgacgttt tggcgttggc gcaccacagg gacgatcaaa
    15541 tcgaaacctt tatgctggca gtcgctcgcg gcggcggttt gcgcgctttg gcggctatgc
    15601 ccaccgtccg cccttttggg gaaaaaggca tcatctggcg gcctttgctg cctttttcgc
    15661 gccaagacat atgggattat gcccaaaaac acggtttgcc gaatatcgag gacgaaagca
    15721 atagcgatac ggcttatttg cgaaaccgct tccggcaccg tattttgccc gaactttcgg
    15781 cgcagattcc ccatttcggg cggcatgtgc tgaacaatgt ccgcgctttg caggaagatt
    15841 tggctttgtt ggacgaggtc gtcgttcagg actgccgttg ggtctgtgag gaaggcagtt
    15901 tcgatacggt gcgttggcag gcgttttccc cacgccggaa aacccatatt ttgcggtatt
    15961 ttttgaagga aaacggcatt cccgtgccga atcagaatgc ccttgccgac attgcccggg
    16021 ttttgacgga ggcaaaaact ggacgttgga acttgcaagg ctttgaattg catcattatg
    16081 caggcaggct gtttgtgttc cgactggaaa aaacggataa actgcggttt ttgaaagaca
    16141 ggcagataag cggaaattta agggaaatat tgacggggca gggatttgtt ttaaaacgtc
    16201 atccgtttgg gcttcctgag catcttttgg agcaggacgg aattttgagg acggtagcgg
    16261 tatcggatac gttggctgtc ggcggcatcc ataaggatgt gaaaaaaatc cttcagggga
    16321 aacgggtttt gcctgtcctg cgcccaattt ggccgcttgt tgccgacagc ggaaaccgtc
    16381 cattggcgtt ggcaaactgt tgtgcggatt tccaatactc ggtttcagac ggcattttgc
    16441 ccgtccatcc tgactttccc attttatttt gataatatcg caaacagatt tcggcggcgt
    16501 tcagacgggt attgtccggt tgcatatttc taaaaggctt gtgaagtgaa acacatcagt
    16561 tcgaccaata atgaacacat ccggcacctg caccgcctgt tgtcgcaagg aaagttcaga
    16621 cggcaatacg cccaaaccgt tttggagggc gtgcacctgc ttcaggtttt cctgcaatcc
    16681 ggcagaaaac cggtcggggt atatattccc gagggcaaaa tgccgtctga agaagtccgc
    16741 aggctgaggg cggttgtgcc ggaaggcaag gttttttccg tttcagacgg catattgaaa
    16801 aaaatcagca gcttgacttg tgcggatgat gtgcttgcgc tgattgatat tccggatgcg
    16861 ggtgctttgc ctgccggcgg cgactgtgtg gttttggacg gcgtgcaaga tccgggcaat
    16921 gtcggcaccg tcttacggag tgcggcggcg gcaggggtag gtacggtcgt tttgggcagg
    16981 ggttgcgcgg acgcgtggtc acccaaggta ttgcgcgcgg ggatgggcgc gcatttcttg
    17041 tcgggcattt atccgcaggc ggatttggaa atatggttgg cgcgctataa aggccgtgtg
    17101 tttgccaccg ccttgcgcga ggaaaagcag gcggttttgt acggcgaaga tttgtgcgga
    17161 ccgacagcct gggtgtttgg caacgaaggc gcgggggtcg gtaaagcggt tttggacagg
    17221 gcggacaagt gtgtcaggat tccgatgcac gatgcaaccg agtctttaaa tgtcgcgatg
    17281 gcggcgacaa tctgcctgtt tgaacagatg cggcagcggt cggcgtattg aggaaaagaa
    17341 atgccgtctg aaaaaatcta ttacggcgta ttgattttct tatgtatcgc ttctatgctg
    17401 ctgtcgccgt ttttttatgc gggtgctttg aagcccaaga aggcggcatt gcggaaggac
    17461 gggcagtgga aactcatctt attgtccaat accgtggcgg cggcggtttt ggcttgggtg
    17521 tggtggaaat ggttttgaca gatattgctc aaaatcgtgc taatggaatc cgaacaaata
    17581 aagaatttgg taaaaaattt gttaaatcaa cgaattaaag ttttgtggaa aacaaaacag
    17641 ctctaagcaa atagggcgtt tgtcggtaaa tacggaagag ttgcggcatt atcgggcatc
    17701 tttaacaagt agtgccgtct tggcaggcaa tcggttttta tgggcagctt gcaaaatcgc
    17761 ggatataaaa ttgcgaatcg gttaaagtgt ggggacgcta tgaaaaattg cgaatttttt
    17821 tatgacccga caagggcaat ctatgatagc ggtgcagatt atttaaccag agaaaaacat
    17881 agattcgtcg taattgcaaa tagtgcttgg gggccattgc ttaatttatc ttgttattat
    17941 gacgaggttt tggaaaagcg gaaaataccg ttcggcaaac aggaaattga tgacgatatg
    18001 gacaaagtgt ccgcccataa gcggaagttt aaagatattt ctgaaatcaa agtaggggat
    18061 ggttgggaat acccgttcaa ttatgagcag ggaatgaaag aattagatga agtgctattg
    18121 aaatacattc ccttttttga agaagaacga taaaggaggt tgatatgcgc gtatctaaaa
    18181 taattggaag tatgttgctt gttacagcgg ttcagaccgt attttcggca aatgtttacg
    18241 cgtgccgcca taatggtaaa accagttaca gccaaactcc gggaaaacat tgtaccaacg
    18301 cgggtttggg gcgggaccgg gtgtacagtt cggttagacc ggcagtaaaa gacagggcgg
    18361 aagacgcagg ggtcggcgat tattcggaca cggtgaggga cgaacatgtc caaaatccga
    18421 aagagaatat gcataaggat gcttcgaata ccggtgcaaa gacgcattga ttgaaaccga
    18481 atcagccatg acggcattga ataatagaat ttgaacgatt agggaactct gatgaaacac
    18541 atccacatta tcggtatcgg cggcacgttt atgggtggga ttgccgccat tgccaaagaa
    18601 gcagggtttg aagtcagcgg ttgcgatgcg aagatgtatc cgccgatgag cacccagctc
    18661 gaagccttgg gcataggcgt acacgaaggc ttcgacgcgg cgcagttgga ggaatttaaa
    18721 gccgacgttt acgtcatcgg caatgtcgcc aagcgcggga tggatgtggt tgaggcgatt
    18781 ttgaaccgcg ggctgcctta tatttccggt ccgcaatggc tggctgaaaa cgtgctgcac
    18841 catcattggg tactcggtgt ggcggggacg cacggtaaaa cgaccaccgc gtccatgctc
    18901 gcatgggttt tggaatatgc cggactcgcg ccgggcttcc tcatcggcgg cgtaccggaa
    18961 aacttcagcg tttccgcccg cctgccgcaa acgccgcgtc aagacccgaa cagcaaatcg
    19021 ccgtttttcg ttatcgaagc cgacgaatac gacaccgcct ttttcgacaa acgctccaaa
    19081 ttcgtacatt accgcccgcg taccgtcgtg ttgaacaatc tggaattcga ccacgccgac
    19141 atctttgccg acttgggcgc gatacagacc cagttccacc acctcgtgcg caccgtgccg
    19201 tctgaaggct taatcatctg taacggacag cagcaaagct tgcaggatac tttagacaaa
    19261 ggctgctgga cgccggtgga gaaattcggc acggaacacg gctggcaggc cggcgaagcc
    19321 aatgccgacg gctcgttcga cgtgttactc gacggcaaaa cggccggacg cgtcaaatgg
    19381 gatttgatgg gcaggcacaa ccgcatgaat gcgctcgccg tcattgccgc cgcgcgtcat
    19441 gtcggtgtcg gcattcagac ggcctgcgaa gccttgggcg cgtttaaaaa cgtcaaacgc
    19501 cgcatggaaa tcaaaggcac ggcaaacggc atcaccgttt acgacgactt cgcccaccac
    19561 ccgaccgcca tcgaaaccac gattcaaggt ttgcgccaac gtatcggcgg cgcgcgtatc
    19621 ctcgccgtcc tcgagccgcg ctccaacacc atgaaactcg gcacgatgaa gtccgccctg
    19681 cctgtaagcc tcaaagaagc cgaccaagtg ttctgctacg ccggtggcgt ggactggaac
    19741 gtcgccgaag ccctcgcgcc tttgggcggc aggctgcacg tcggcaaaga cttcgatgcc
    19801 ttcgttgccg aaatcgtgaa aaacgccgaa gcaggcgacc atattttggt gatgagcaac
    19861 ggcggtttcg gcggaataca cggaaagctg ctggacgctt tgagatagcc cgggcgatgc
    19921 cgtctgaaag cccttcagac ggcatcgtcc ggctgcgcgg cacaaaggcg gaaaaaccgt
    19981 ttgccccgta ttttcaaacg cgttacactt gccgccgctg ttttcagcca tttgattacc
    20041 cgcaaccgcc gtcattgcgc cggcggtttg cctgtcagcg tcattgcgcc gctgtaaata
    20101 cgaaagaaca cattatgacc gtatcccccg tcgccttgcg ccgtaagacc gagtgcaagc
    20161 ctcatcccac cgcgcgctat tggaaaaaat gcgatgtcga ggcacttttc ggactgccgt
    20221 ttttagaact tgtccatcag gcggcagaag tccaccgcca aaatttcaac ccgcgcgaaa
    20281 tccagctttc cacgctgttg tccatcaaaa ccggcggttg tcccgaagat tgcgcctact
    20341 gtccgcaatc ggcgcaccac aataccaatc tgggcaaaga gcagatgatg gatgtggatg
    20401 aaatcgtcga aaaagccaaa atcgccaaat cgcgcggcgc aagccggttt tgtatgggcg
    20461 cggcatggcg cggccccaaa cccaaagacg tggagacggt ttccgcaatc atcaaagccg
    20521 tcaagggctt gggtatggaa acctgcggca cgttcggtat gctcgaagaa ggtatggcgg
    20581 aagacttgaa agaggcgggc ttggattatt acaaccacaa cctcgacacc gaccccgacc
    20641 gctacaacga catcatccat acacgccggc atgaagaccg tatggacacc ttgggcaaag
    20701 tccgcaacgc cggtttgaaa gtctgctgcg gcggcatcgt cgggatgaac gaaacccgcg
    20761 ccgaacgcgc agggctgatt gccagcctcg ccaacctcga cccgcagccc gaaagcgtgc
    20821 cgattaaccg gttggtcaaa gtggaaggta cgccgcttgc cgatgccgag gatttggact
    20881 ggacggaatt tgtccgcacc atcgccgtgg cgcggattac gatgccgcaa agttatgtcc
    20941 gactgtcggc agggcgcagc aatatgccgg aagcgatgca ggcgatgtgc tttatggcgg
    21001 gcgcgaactc gattttttac ggcgacaagc tgctgaccac gggcaatccg gatgaagacg
    21061 gcgacagaat cctgatggaa aagctcaacc tgtatccctt acagtttgag ctggaaggcg
    21121 aggtcgccga agtggaaaaa gcctctggga ttaaagtgga ttattgacga ttgcaaaaat
    21181 gccgtctgaa acccgaaaaa aggctttcag acgacatttg ttcggacggt atttccaata
    21241 tctttttacc ggcgcgtgat gttgccgtcg ggcgagacat ccagcccgtt cccgttgggg
    21301 aagtcgctgc ggttcagata aataatccgc ccgataacgg tttttcaggg tcgattttgg
    21361 ggattttatc gtcggcttgg gtaataggga tgatagttcc ggaaataaat ttaccctgtt
    21421 tgttggtgat aattttgaaa atcggcgcaa tgccgctgat gccggaggtg ttgattgcgc
    21481 cgtaggtggc aaagttgccg ccgctgtaag agatgaagcg gtcgcggtaa agttcgacgg
    21541 cgcgtgtaac gtgcggcccc tgcccgaata cgacatccgc gccggaatcg acggcaagcc
    21601 gtgcaaactc gacgacgttg cccctgtttt ccccatagaa gatttcggta tcgaacggca
    21661 ggtgttccgc ctgtttccct tccgcgccgc cgtggaacat tacaatgacg atgtcggctt
    21721 tctgtttggt tttggtaatc cgttttctaa ctttggcata atcgttcagt ttgacggcgg
    21781 caaggttggg ggcgaaggag acgaagccgg atcttacgcc gtttttcttc aggatggcgg
    21841 tttcaaacct gttttcgatg cccgaatatt tgatgttcaa ttcgtcaagg ttcgcccttt
    21901 atgccgtttc cgcaccgcaa accgccgggg tcaagccctc ggcgcatcct gccggaacgg
    21961 aatccccgtg ctgccgattg acggttcaaa ccccgcgccc gtttcaaata ccggcgatgt
    22021 ggacggacag gatgcgcctg acgaaaagac agccgatacc gtttccatta tcggcgtggg
    22081 cgacattatg ctcggcagca attatccggt cgattacctg cccgatacca atattctgaa
    22141 aaacgtcgaa tctgccttgc aagacgcgga cattaccgtc ggcaacctcg aaggcacgct
    22201 gtttgacgaa ggcggtacgc cgaaaaaatg tgcaaccccc caaaatatgc tatgcattcc
    22261 gaacgccctc cgcatacggg caataccttg ccgacgcggg attcgactac ctcagcttcg
    22321 ccaacaacca cagcaacgac ttcggcgcgc aaggcatcac ggcaacggcg gcgagcggca
    22381 gctcttttac atactcgatc gcgctaaagc cgctgccgat aacgaggcca aaattgcgga
    22441 aaataccgcc atcgcccaga taaatttgtc catcatcaga cctttactgt tcagacgaga
    22501 cagcatttgc cgcacgtttt ggggcttatc tttcgatttg cgctacgtcg cgcaccgcgc
    22561 ctttgtcggc ggaagtcgcc atcgcgccgt aagcacgcag ggctgcggag acgtagcggt
    22621 cgcggttttc cggtttccac gctttgctgc cgcgcgcttc catttcggca cggcgggcgg
    22681 caagctcttc atcggaaatg gcaaggtgga tgctgcggtt ggggatgtcg atttcgacgg
    22741 tatcgccttc gtgtaccaaa ccgatcgcgc caccttccgc cgcttcgggc gaggcgtgtc
    22801 cgatggacaa acctgatgtg ccgccggaga agcgtccgtc ggttaagaga gcgcaggctt
    22861 tgccgaggcc tttagatttc aggtaggaag tcggatacag catttcctgc atgcccgggc
    22921 cgcctttcgg gccttcgtag cggatgatga cgatgtcgcc ggcgacgatt tggttgccca
    22981 aaatgccttc tactgcgtct tcttggcttt caaacacgcg ggcgcggccg gtaaatttga
    23041 ggatgctctc gtccacgcct gcggttttta ccacgcagcc gcgctcggcg atattgccga
    23101 acaagaccgc caaaccgccg tcttgcgagt aggcgtgttc cacgtcgcgg atacagcctt
    23161 tttcgcggtc gaggtcgagg gttttccaca tacggttttg cgagaacgct tgggtggtgc
    23221 gtacgccgcc gggcgcggct ttgaagcgtt cgatggcgtg ggtgttttca gggttggtta
    23281 cgtcccattt ttcaatcgcg tctttcagcg tcggcgcgtg gatagtgtgc acgtcggtgt
    23341 gcagcttgcc cgctttgtcc aattctttca ggatggcgaa aatgccgccg gcgcggtgca
    23401 cgtcttccat atagtagtcg tggttgttgg gtgcggtttt gcagatgcag ggcacaacgc
    23461 ggcttaagcg gtcaatgtcg gccattttga aatcgacacc ggcttcgttg gcaacggcca
    23521 acaggtgcaa aatggtattg gtgctgccgc ccatcgcaat gtccatcgtc atagcgtttt
    23581 caaacgcttt tttggtggca atgctgcgcg gtaacacggt ttcatcgttt tgctcgtaat
    23641 agcgtttggt gatttcgaca atcatacggc cggcttcgag gaacagttct ttgcggccga
    23701 cgtgggtggc gaggtaagaa ccgttgcccg gcagggacag cccgagtgct tcggtcaggc
    23761 agttcatcga gtttgccgta aacatacccg aacacgagcc gcaggtcggg caggcgtttt
    23821 gttcgacttc ttcgacttgc cggttgctga cattgtcgtc tgccgattcg atcatcgcgt
    23881 caatcaagtc caagcggcgt tctggttgga tgtttgccac gccgataact ttacctgctt
    23941 ccatcgggcc gccggagacg aagatggtgg ggatgttcag gcgcatcgcg gcaatcagca
    24001 tgcccggggt gattttgtcg cagttggaaa tgcacaccag cgcgtcggcg cagtgggcgt
    24061 tgaccatata ttcgatagag tcggcaatca aatcgcggct gggcagggag tacagcatgc
    24121 cgctgtgtcc catagcgatg ccgtcgtcga tggcgatggt gttgaattct ttggcgattg
    24181 cgccggcttt ttcgatttcg cgggcaacca gctggcccat attgtgcagg tggacatggc
    24241 cgggcacgaa ttgggtgaag gagttggcaa cggcgatgat gggcttgccg aagtcggttt
    24301 ccatcacgcc ggtggcgcgc cacaatgcac gtgcgcccgc catattgcgg ccgtgggtgg
    24361 aggttttgga gcggtattct ggcatagtgt gtttccttgt ctgctatgcc gtctgaacgg
    24421 caaaaggctt tcagacggca tttttgttgt gttttgaaat gaaaaaaaag gtattttata
    24481 ccaagtatcg gaattttgcg gaatggaaac gcgtgcggca aaaaaggaca tcccccgcag
    24541 gaatgcgggg gacggtttca ggcgcgcgca atcgggacgg ctttggatgc gtcccaaaaa
    24601 tcgacgggcg catccaacac gggtttgacg atgcccgtcc gtatggcgaa atcgccgaaa
    24661 ccttcgtcgg tatcgcgtcc cgccgcccat ttgccgatca ggtcgtctaa ttcggaaagg
    24721 atttccggca gggtaatgtt ttctttgtag aggcggggga tgcgtacgcc ttcgcggtcg
    24781 ccgccgatgt ggaggttgta gcgtccgacg gctttgccga ccagtccgat ttccgccaac
    24841 atcgcccgtc cgcagccgtt ggggcagccg gtaatgcggg taacgatgta gtcgcccgac
    24901 gtgccgtgtt tcgccataat cttatccagc tcgccgatga agtccggcag cacgcgttcg
    24961 gcttccgcca ttgccagcgg gcaggtcgga aaggaaacgc aggacatcgc attttcacgc
    25021 agtttactga catcgttgcg gattaatccg tatgttcggg caagttcttc gatttttgct
    25081 ttgtctgctt cggcgacatt tgccacgatg aggttttggt tggcggtgat gcggaaatcg
    25141 cctttgtgga ttttggcgat ttccaacacg ccggtcagaa gctgtttccc gctttcgtca
    25201 accaaacgcc cgctttcgat gaaaagggtc aaatgccagt tgccgtctat gcctttcacc
    25261 cagccgatgc ggtcgccgcg cccggtaaat ttgaacgggc gtatgggttc gaacggcata
    25321 cccatacggc gttcgacttc ggcgcggaag ttgtccaagc ccatattttg aatggtgtag
    25381 cgggtgcggg cgtttttgcg gtcgctgcgg ttgccgaagt cgcgctgcgt ggttaccacc
    25441 gcttcggcgg ccttcagcgc gtgttccgga ggcacgaaac ccagttccag tgaaatgttc
    25501 ggataggttt tggtgttgcc gtgttccatc gaaagcccgc cgcccgccaa aacattgaat
    25561 ccggcaagct gtccgttgcc gtctgaaatg gcgacaaaat ccaagtcgtt gccgtagcag
    25621 tccacatcat ttaagggcgg gatgacgact gcggttttga atttgcgcgg cagataggtt
    25681 ttgcccaaaa tcggctcgtc ttcttgaagg aagtcgtcag aactttgaac ttttttgccg
    25741 tccacccaca catccagata accgcgcgtg cgcggcagca agtgttcgga aatctttttc
    25801 gcgtattcgt aagcctgccg gtgcagttcg gactcgatcg ggttggacgt gcaaagcacg
    25861 ttgcggttca tatccgccgc cgtggcgatg gaatccaaac ccagtttgtg caagaggcgg
    25921 tgcatcgtct gcaacttggc tttcggcacg ccgtgaaatt ggaaggtttg ccggttggtc
    25981 agccggatgg agcggtaatg actgttttcc cgggcaaatt tgtccagttc tatccattgg
    26041 gacggtttga tgatcccgcc cggcagccgg cagcgcaaaa gcataaattt caagggctcg
    26101 agttttgcct cggcgcgttc ggcgcggatg tcgcggtcgt cctgctcata cataccgtgg
    26161 aagcggatga gttggaagtt gtcgcctttg aagccgcccg tgagcgggtc tttcaaatcg
    26221 tccaaaatcg tgccgcgtaa aaaattgctt tcggttttca gacgttcgtt gtcggatagc
    26281 ggtttttctt gccacgccaa accttttgtc ttggtctgta cggtcatttt gtgttcctcc
    26341 cgattatatt taatcaataa acatcacgct gatagcgttt ttcttcgcgc agcatatcca
    26401 aatattcttc tgcgccctct tcgtccaaat gtcctgcccc gataatcaca tccagcaagg
    26461 cggcttccac gtcttttgcc atttttgccg catcgccgca cacatagata tgcgcgcctt
    26521 cctgcagcca ttgccaaagt ccttccgcct gttcgcggat tttgtcctgc acatagattt
    26581 tttcttcctg atcgcgggac caggcgaaat cgtacctgtg caggaaaccg tctttggcaa
    26641 actgctgcca ttcggtttga tagagaaaat cacgggcaaa atgcggattg ccgaaaatca
    26701 gccagttttt gccttccgca ttttctgcgg cacgttgttg gacgaaggcg cggaacggtg
    26761 cgacgccggt gcccgagccg atcatcacaa tcggcttgcg gctgtcttcg ggcagcctga
    26821 agccgtcgtt gcgttccaca aacacgcgca ccgtgccgtc ctcttccagc cggtcggcaa
    26881 ggaaacccga tgcgccgccc gccctggcgc gcccttcgtg ttcgaaacgc accgcgccga
    26941 cggtcaggtg cacttcgtcc cccacttccg cctgcgacga ggaaatcgaa tacaggcgcg
    27001 gcgcaagcgg gcgcagtagg ccggcgaatt gttccgccgt cagttttgcc gggaagcggt
    27061 gcagcacatc ggcaatcggc gtgctttgca caaagccttg caaaacggcg ttgtcggcag
    27121 caatacggtc gagttcgtca tcatcggcga acggggcata gcctttgaca aaggcggggg
    27181 tgttttgcgt gagttcaaaa tgggataaca gtgcggaggc aaccggcagg gtttttccgc
    27241 ccgcctgtat ttccgttgcc ggatcgatgc cgagcaggtc taggatttcc ctgaccagtg
    27301 ccggatcgtt gtcaaaccaa acgccgagcg cgtcgcccgg gaggtagtgc aaatccgaac
    27361 cgctcaaatt gatttcgatg tggcgcacgt ctttatcgga ttggcgggcg gtgattttct
    27421 gattggccag cagggcggcg ggaaaggggt ctgccttgca gtacctgcca tccggtgccg
    27481 tctgaaggcc ggcggggggc gttgtctgcg gcgcgggcgt tgcccggttt tttgcggctt
    27541 cttcttttaa gcgcgcgaca atgcggcctg tccatccgtc tgcggcggcg gcaaagtcca
    27601 aatccgcatc aacgcgttcg agcaggcgtt ttgcgcccaa ttcttcaaaa cgccggtcga
    27661 aatctttgcc cgcccggcag aaattcggat aggaactgtc gcccaaaccc agtacggcaa
    27721 attggagttt gtccaatttc ggggcttttt tgccgttcag cagtttgtgc agcacgacgg
    27781 cttcttccgg cggttcgcct tcgccctggg tggacgtaac cagcagcagg cggcgttcgt
    27841 cggcgatgtt tttcgcctta tagtctttca gttcggcgcg cctgacttgg atgccggcgg
    27901 cttccaggct gtccgacgct ttgtcggcaa cggatttcgc attgccggtt tgcgaggcgg
    27961 aaaggacggt tacggaaaaa ggttctgccg ccggcaatgc cgtctgaagc gcgggcagcc
    28021 ctgcggatgc cccgtttcct gcttttgccc aagcgtagcc ggacagccac gcccattgtg
    28081 ccgcgtccag ccccgacagg agctgcgtga tttcgggcgg cagaggcggt aatggcggat
    28141 ttgtgttctg catatcgtgt tcactcataa aatcatacct gccgcaacag tgccgtatgt
    28201 cgcttcgtct atcaggataa acgaaccggc ggcggtgttt tccgcataag gcgttgccgt
    28261 aacgggtttt tgaaggttga tgcggacttt ggcgatgtcg ttcatcttca aggattccgc
    28321 gccggcctct tgttccagcg tgcggacatc taaaacgctt tcaatttccc cgacttttgc
    28381 cggcacggtt tgcgtgccgt gcttgagcag gtatttgcgc gcggtgttga gcggacgttc
    28441 gtcaaaccag caaagcgtgg cttccagatg tttttgcggg gcgagcgggg aatttttatc
    28501 gacaaaaagg tcgccgcgcg aaacatcgat gtcgcggtcc agccggaggg ttgccgcctc
    28561 gccggcaaaa gcctgcgcca cttccccttt cggcgtgatg atttcggaca cttcggcggt
    28621 cagcccgttc ggttcgatgc ggacggtttg cccgacggcg accgaaccgc gttcgatgcg
    28681 cccctgatag cctcggaaat catcggcctt gtcggcatct tggcggacga ccagttggac
    28741 ggggaaataa aaatcggcag cggaacgacc ggtttcgtcc gcccccggca ggttttccaa
    28801 gatgaccagc agcggttcgc cccgatacca cggcatattg ccgccggggt aaacgaggtt
    28861 gtcgcccaag agtgcggaca ccggtacgaa atgcacgtct ttcaaaccga gctgttcggc
    28921 aagtcggcgg tatgcctcca caatggcgtt gaatttgtct tcgctgtaat ccagcaggtc
    28981 cattttgttg accgccacca caatatgcgg gcagttgagt tggcggagga tggcggaatg
    29041 gcgtttggtc tgcggcagaa gctgcaaggg ctgcgcgccg aaatccagtt gggatgcgtc
    29101 aaccagcacg actgccgccg aagcggtgct tgcgcccgta accatattgc gcgtgtattg
    29161 ttcgtgcccc ggcgtgtcgg cgatgatgaa tttccgtttc gccgtggaaa aatagcggta
    29221 tgccacatcg atcgtaatgc cctgttcgcg ttcggcttcc agtccgtcgg tcaggatgga
    29281 gaagtctatg gtttctttca aacctttgct tttgccggat tccaaggttt tgatttggtc
    29341 ggacagcagg gctttgctgt cgtagagcag tcgtccgatc agggtgcttt tgccgtcatc
    29401 gacgctgccg gcggtaatga agcggagcgg ggcctggtgt tgtgccgtca tattttcttc
    29461 ctcatatctg cttaaagggt ttttgaaatt tagaaatagc cttctttttt gcgtttttcc
    29521 attgccgcct cgcttgcctg atcgtctagc cgggtcgcgc tgcgttcgga aatgtcggca
    29581 accgccgttt ccctgataat ctccgccggc gtggacgcgg tgctttctac cgggcaggtg
    29641 cagctgatgt cgccgacggt gcggaagcgg acatcaagga tttcggaggt ttcagacggc
    29701 attttcgggg tgagcggcgt tacagggacc agcagccccc tgcgtctgac cacttcgcgc
    29761 ctgtggctgt aataaatcgg cggcagctcg aggttttcgc gggcgatgta ttgccagatg
    29821 tcgagttccg tccagttgga aatcgggaag acgcgcatat tttcgccttt gtgcagcctg
    29881 gtgttgtaca gcgaccacag ctcggggcgt tgcgccttcg gatcccattg tccgaactcg
    29941 tcgcggaacg agaaaatccg ttctttggcg cgggcttttt cttcgtcgcg ccgcgcgccg
    30001 cccatcagcg cgtcaaagcc gtttgcctcg atggtttcca acaaggtaac cgcctgtgcc
    30061 gcattgcgcg aatcggtttc tttgcgtaag accaccgtgc ctttagcgat ggagtcttcc
    30121 acgcgcccca ctatcaggcg ggcattgagt tttgccgcct gcgcgtcgcg gaaggcaatc
    30181 acttcggggt agttgtgtcc cgtgtcgata tgcaccagcg ggaagggcag ttttaccggc
    30241 ctgctgccca gccggaaggc tttgcaggcg agggcgagca ggaccacgga atctttgccg
    30301 ccggaaaaga gcagggcggg gttttcgcat tctgccgcca cttcgcggat aatgtggatg
    30361 gattcggatt ccaaccagtc gagttggacg ttgttcggtt cggttttcgt catacgatat
    30421 tccttatttc ttctgtttga tccttatgaa ttatttgtgc agcccgcatt ctttgctgtt
    30481 tttatcttcc caccaccacc tcccggcgcg gatgtcttcg ccggccttga cggggcgggt
    30541 gcaggggtcg cagcctatac tgggaaagcc ttgccggtac aaatcgttgt aaggcacatt
    30601 gttggcaagg atgtatgccc acacgtcgtg ttccgaccag tcgaaaatcg ggttgtattt
    30661 atcgatgccg cgcccggcat catattcggc aaacggcagt tccgtgcgtg tggcggactg
    30721 ttcgcggcgt tgcccggtaa gccaagcatc cgccccggca atggcgcggt cgagcggttc
    30781 ggtttttcgg atgcggcagc attcgcggcg cgcttcaacg ctgtcgtaaa aggcaaacct
    30841 gcctttgctt tccacataat gcagggcatc ttcccgtatc ggttggaaac gcttgatttg
    30901 catatgcgga taaacacgtt caatcctatc caacaggttt aaagtttccg cgtgcagcag
    30961 ccccgtatcc aaagtaaaaa taccgatatt gaggttttct ccggcgataa ggtcggtaat
    31021 taccatatct tccgcagcaa ggctgctggc aaaccgtgca tcccggtggc tgccggcaat
    31081 ccggtgcagg cgttgtttga gggtttccgt tttttccgcc aaagccgttt cactgccatt
    31141 ttcaatcggc ggaattttcc ataaagcagg tttgaaaatt ttcattttgt ccgccttgct
    31201 ttatgcggct tgttgttctt gtccggtgcc cagtccgtcc aatgcaaaat acgcgtgttc
    31261 ggccggattg cttgcttttt tggcgttttc gccgaaccaa gccagttttt cgtgcagttc
    31321 caccacttcg cccacaacaa ttaaagccgg cttcggcgcg ttttcggcga ggcgggcgag
    31381 gttggcgagc gtgccgattg ccgttgattg cgttgattgc gtgccgtggc tgatgacggc
    31441 ggcaggcgtg tcgggcgggc ggccgtattg ttgcagccgt tcggcaatct gcgcggcttt
    31501 gagcgtgccc atataaatca ccaaggtttg gcggctgcgg gcaagcgtct gccattcgat
    31561 atcgggcgca tccgccttgc ggtggccggt aacgaaaacc gcactttggg cataatcgcg
    31621 gtgcgtgagc gggatgccgg cgtaagccgt cgcaccgatg gcggcggtaa tgccgggcac
    31681 aaccgaaaac ggaatgtggt ggcgcgccag cacttccaat tcttcgccgc cgcgtccgaa
    31741 cacaaaagaa tctccgcctt tcaaacgcac cacgcgtttg ccctcgcggg ccagcctgac
    31801 cataagcgca ttggtgtcct cttgcggggt gcgctcgccc cgggcgcgct tgccgacaaa
    31861 aatccgttcc gcatcgcggc ggacgaggga cagtatgccg tctgaaacca gcgcgtcgta
    31921 aagcaccacg tctgcctgct ggatttcctg cagccctttg agcgtcagca gccccgcatc
    31981 gccgggaccc gcgccgacca gcgagacgga gccgccttga tcattttgac gactttgttc
    32041 caattggcct gccaattccc gttcggcaag ggtgttttgc cggtttttga cgagggtggc
    32101 gaaacgtccg ttaaactgct tttcccaaaa gcggcggcgt tcggtaacgg atttcagttt
    32161 gcccttgacg gcatcgcgcc accttcctga aatttccgcc atatcgccca aagacggcgg
    32221 cagcagggct tccagccttt cacgcagcag tcgggcgagg acgggcgcgc tgcccgaact
    32281 ggaaacggca atttgaatcg gattgcgatt gataatcgaa ggaaaaataa aactgcaata
    32341 atcgcgatcg tccaccacgt tgaccggttt ttggcagctt tcggcaagct ggaaaacgcg
    32401 ccggttgagg gcttggtcgc tgcttgccgc aatgatgagg aaaactgtgc gaatgtgttc
    32461 ggcacgaaat tcttcggcaa gccacaggat tttgttttct gccgccagtg cacttaattc
    32521 agcattcaac tgatttgcaa caactctgac ttgtgcgccg gcatccagca acaagctgat
    32581 tttgcgcgcg gcgaccgaac cgccgcctac gaccaatacg gggcggccgg cgaggttggc
    32641 gaaaatgggg aaataattca ctggcgaact cctttgctgt ttgcacgcac cttgtttccg
    32701 atatgatgcg tcgcggtatt tttgtcggaa tgcgggtcat tttagacaaa aggattttcc
    32761 cggttaaata ataaaaaggc atttgttaga agctgaaagc tatatgaggg cggctgcgga
    32821 tgcggcggtt ttcc
//
LOCUS       DAWGBY010000010        29000 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.010, whole genome shotgun sequence.
ACCESSION   DAWGBY010000010 DAWGBY010000000
VERSION     DAWGBY010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29000
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.010"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            25..1107
                     /locus_tag="WHG62_000430"
     CDS             25..1107
                     /locus_tag="WHG62_000430"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ1724592.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVAGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            1222..1494
                     /locus_tag="WHG62_000431"
     CDS             1222..1494
                     /locus_tag="WHG62_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ1724593.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            1584..2921
                     /locus_tag="WHG62_000432"
     CDS             1584..2921
                     /locus_tag="WHG62_000432"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ1724594.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            3058..4371
                     /locus_tag="WHG62_000433"
     CDS             3058..4371
                     /locus_tag="WHG62_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004465726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ1724595.1"
                     /translation="MTGGFLKISEVLVKVGDGVHTLLLDRQIVRDGRKFDAPLLWMVV
                     LMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRL
                     VPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRRE
                     EVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLI
                     MVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAF
                     LDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFG
                     FFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGA
                     LPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            4375..5442
                     /gene="murG"
                     /locus_tag="WHG62_000434"
     CDS             4375..5442
                     /gene="murG"
                     /locus_tag="WHG62_000434"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ1724596.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFEGREGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            5597..7006
                     /locus_tag="WHG62_000435"
     CDS             5597..7006
                     /locus_tag="WHG62_000435"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ1724597.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENIGAQMKFTVHVQMKGHGQEPFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            7119..8033
                     /locus_tag="WHG62_000436"
     CDS             7119..8033
                     /locus_tag="WHG62_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ1724598.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRNDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAESCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            8023..8751
                     /locus_tag="WHG62_000437"
     CDS             8023..8751
                     /locus_tag="WHG62_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ1724599.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKTLGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            8837..10081
                     /gene="ftsA"
                     /locus_tag="WHG62_000438"
     CDS             8837..10081
                     /gene="ftsA"
                     /locus_tag="WHG62_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ1724600.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            10200..11378
                     /gene="ftsZ"
                     /locus_tag="WHG62_000439"
     CDS             10200..11378
                     /gene="ftsZ"
                     /locus_tag="WHG62_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ1724601.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            11517..12827
                     /locus_tag="WHG62_000440"
     CDS             11517..12827
                     /locus_tag="WHG62_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ1724602.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            13452..14327
                     /gene="prpB"
                     /locus_tag="WHG62_000441"
     CDS             13452..14327
                     /gene="prpB"
                     /locus_tag="WHG62_000441"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ1724603.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            14412..15566
                     /gene="prpC"
                     /locus_tag="WHG62_000442"
     CDS             14412..15566
                     /gene="prpC"
                     /locus_tag="WHG62_000442"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ1724604.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            15978..16700
                     /locus_tag="WHG62_000443"
     CDS             15978..16700
                     /locus_tag="WHG62_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEZ1724605.1"
                     /translation="MDKDKGSYAGIPVQNTKELVWQKIQEIPISECGEPLVSVGNTGR
                     IRVNPVYFSQGIEGAINTVLLRRSVADRLTQVVSLLPEMYGLEIFDGWRPVIVQRALR
                     ENMKQEIEKRHPEYDEVQVREALDCFAADPDRAGMPLPHLTGGSVDVGLFDIKSGKSL
                     DMGSEFDATGHLSYSDALEKEGEYFSSARNLRRILIHAMKEAGFSNLPTEWWHFDYGN
                     QNWAYFTQQSNAVFGAVEEQDT"
     gene            16726..17931
                     /locus_tag="WHG62_000444"
     CDS             16726..17931
                     /locus_tag="WHG62_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 domain-containing protein"
                     /protein_id="HEZ1724606.1"
                     /translation="MQTLISADNHLLLWAFVMLAAAAAIFIEQNSRLAGKVPGAVLAL
                     LIALIASNLGVIPTDAPVFDAVWSYIVPLAIPLLLFQLDLHALFKESGRMLFIFLISS
                     LGTVIGTLVSFALLKNYIPELDKVAGMISASYTGGGVNFAAMSAKLNPAKDVIAATIV
                     ADNLMMACYFFILIGISSSYWVRKVWGSPYQDKLEQEYHDPSVNKAAEYWKPKSISLQ
                     SIALSLAASILLVAVSFSLSSFLQNHFQSVDGVALKMLTGLISDKYLLLTTFTLAVVL
                     FFRKGIQKLDGSQELGTYCIYLFFVVIGVPASIPLIIKTAPLLFVFTLIIAVLNLLLT
                     LVLGKLFKFSIEEIVLACNANIGGPTTAAALAISKGWRDLVGAILLIGTVGYIIGNYI
                     GSFVYALLS"
     gene            18035..20641
                     /gene="acnD"
                     /locus_tag="WHG62_000445"
     CDS             18035..20641
                     /gene="acnD"
                     /locus_tag="WHG62_000445"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ1724607.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRQPGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAGKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVIGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            20994..22163
                     /gene="prpF"
                     /locus_tag="WHG62_000446"
     CDS             20994..22163
                     /gene="prpF"
                     /locus_tag="WHG62_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ1724608.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFSIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            22577..23776
                     /locus_tag="WHG62_000447"
     CDS             22577..23776
                     /locus_tag="WHG62_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ1724609.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVACGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            23884..24504
                     /locus_tag="WHG62_000448"
     CDS             23884..24504
                     /locus_tag="WHG62_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ1724610.1"
                     /translation="MAQFFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRRGCGDTAVFGL"
     gene            complement(24631..25074)
                     /locus_tag="WHG62_000449"
     CDS             complement(24631..25074)
                     /locus_tag="WHG62_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ1724611.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            25248..25616
                     /locus_tag="WHG62_000450"
     CDS             25248..25616
                     /locus_tag="WHG62_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ1724612.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFA
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            25661..26815
                     /locus_tag="WHG62_000451"
     CDS             25661..26815
                     /locus_tag="WHG62_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ1724613.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(26872..27744)
                     /locus_tag="WHG62_000452"
     CDS             complement(26872..27744)
                     /locus_tag="WHG62_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ1724614.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATFPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALIENLWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLADILTADDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            27829..28641
                     /locus_tag="WHG62_000453"
     CDS             27829..28641
                     /locus_tag="WHG62_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ1724615.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGDVPHLSAEGVSVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         6713 a         7342 c         8013 g         6932 t
ORIGIN      
        1 gacaaaacaa aaaaaggaag ccccatgttt ttatggctcg cacatttcag caactggtta
       61 accggtctga atatttttca atacaccaca ttccgcgccg tcatggcggc gttgaccgcc
      121 ttggcgtttt ccctgatgtt cggcccgtgg acgatacgca ggctgaccgc gctcaaatgc
      181 gggcaggcag tgcgtaccga cggcccgcaa acccacctcg tcaaaaacgg cacgccgacg
      241 atgggcggtt cgctgattct gaccgccatt accgtgtcca ccctgttgtg gggcaactgg
      301 gcgaacccgt atatctggat tctcttgggc gtattgctcg ctaccggcgc actcggtttt
      361 tacgacgact ggcgcaaagt cgtctataaa gaccccaacg gcgtgtccgc caaattcaaa
      421 atggtgtggc agtcaagcgt tgccattatc gccggtttgg cattgtttta ccttgccgcc
      481 aattccgcca acaatatttt gattgtcccg ttcttcaaac aaatcgccct gccgctgggc
      541 gtggccggct ttttggtgtt gtcttacctg accatcgtcg gcacatccaa cgccgtcaat
      601 ctcaccgacg gcttggacgg ccttgccgcc ttccccgtcg tcctcgttgc cgccggactc
      661 gccattttcg cctacgtcag cggacactac caattttccc aatacctgca attaccttac
      721 gttgccggcg caaacgaagt ggtgattttc tgtaccgcca tgtgcggcgc gtgcctcggt
      781 ttcttgtggt ttaacgccta tcccgcgcaa gtctttatgg gcgatgtcgg tgcattggca
      841 ttgggtgccg cgctcggtac cgtcgccgtc atcgtccgcc aagagtttgt cctcgtcatt
      901 atgggcggat tatttgtcgt agaagccgta tccgttatgc ttcaggttgg ctggtataag
      961 aaaaccaaaa aacgcatctt cctgatggcg cccatccatc accactacga acaaaaaggc
     1021 tggaaagaaa cccaagtcgt cgtccgcttt tggattatta ccatcgtctt ggtgttgatc
     1081 ggtttgagta ccctcaaaat ccgctgaacc tatgccgtct gaacaccttt cagacggcat
     1141 ttgaacgcgc aataaacctg cggcgacaat ccgcccagcc ctatcgttaa cggcggctta
     1201 tactaaaaca gaagtaaaac catgaaacag acagtcaaat ggcttgccgc cgccctgatt
     1261 gccttgggct tgaaccaagc ggtgtgggcg gatgacgtat cggattttcg ggaaaacttg
     1321 caggcggcag cacagggaaa tgcagcagcc caatacaatt tgggcgcaat gtattacaaa
     1381 ggacgcggcg tgcgccaaga ccttgtgctc gctcaagaat ggtttggtaa ggcttgtcaa
     1441 aacggagacc aagacggctg cgacatttac caacgcctga aggcaggtta ttgaacagcc
     1501 cgcgatgccg tctgaaagcg gcttgggcag gggcggacat ccccccacct gcccaatatg
     1561 atttgtttta ggacaaaacc aaaatgacgc ttgaaaacaa aaaaatcctc gtcgccggac
     1621 tcggcggtac gggtatttcc atgattgcct atctgcgcaa aaacggcgcg gaggtggccg
     1681 cttatgatgc ggagttgaag cccgagcgcg tgtcgcaaat cggtaagatg tttgacgggc
     1741 tggtgtttta cacaggccgt ctgaaagatg cgctggacaa cggtttcgat attttggcac
     1801 tcagccccgg catcagcgag cgtcagccgg atattgaggc gttcaagcaa aacggcggac
     1861 gcgtgttggg cgacatcgaa ttgctggcgg acattgtgaa ccgccggggc gacaaggtaa
     1921 ttgcgattac cggcagcaac ggcaaaacca cggtaacgag cctggtcggc tatctctgta
     1981 tcaagtgcgg gctggatacc gttatcgcgg gcaatatcgg cacgccggtt ttggaggcgg
     2041 aatggcagcg cgaaggcaaa aaggcggacg tgtgggtgtt ggagctttcc agcttccaac
     2101 tggaaaacac cgaaagcctg cgcccgacgg cggcgacggt actgaatatt tccgaagacc
     2161 atctcgaccg ctacgacgac ttgctcgact acgcgcatac caaagccaag attttccgtg
     2221 gcgacggtgt gcaggttttg aatgcggacg atgcgttctg ccgtgccatg aaacgtgccg
     2281 ggcgcgaggt aaaatggttt tcgttggaac acgaagccga tttttggttg gaacgtgaga
     2341 caggccgcct gaaacaaggc aatgaagatt tgattgccac gcaagatatt ccgttgcaag
     2401 gcttgcacaa cgccaccaac gtgatggctg ccgttgcctt gtgcgaagct gtcggtttgc
     2461 cgcgcgaagc attgctcgaa cacgtcaaaa cctttcaagg cctgccgcac cgcgtggaaa
     2521 aaatcggcga gaaaaatggc gtggtgttta tcgatgacag caaaggcacg aacgtcggtg
     2581 cgaccgccgc cgcgattgcc ggtttgcaaa atccgctctt cgtgatttta ggcggcatgg
     2641 gcaaagggca ggacttcacg cctctgcgcg acgcgcttgc cggcaaggca aaaggcgtgt
     2701 tcctgatcgg cgttgatgcg ccgcaaatcc gccgcgattt ggacggctgc ggtctgaata
     2761 tgaccgactg cgccactttg gaagaagccg ttcagacggc atatgcccaa gccgaagcgt
     2821 gcgatatcgt gctgctcagc ccggcttgtg cgagttttga tatgtttaaa ggctacgcgc
     2881 accgttcgga agtgtttatc gaagcgttta aggctttgtg atgccgtctg aaatgcaaac
     2941 gccgtcattg ttgggcggca agtaaagatt tagaataccg atttgggatg tatcgtatgt
     3001 tcggacggca ttgtctgccg tctgaaattt ttgccctttg cggcaggtgc aaacagaatg
     3061 acaggtggtt ttttgaagat ttcggaagta ttggtaaaag tgggcgacgg tgtccacact
     3121 ctgctgctcg acaggcagat tgtgcgcgac ggcaggaaat tcgacgcgcc gcttttgtgg
     3181 atggtggtgc tgatgacggc gttcagcctg ctgatgattt attcggcttc tgtgtatttg
     3241 gcatcaaaag aaggcggcga tcagtttttc tatttgacca gacaggcggg gttcgtcgtt
     3301 gccggcttga tagcgagcgg ttttttatgg tttctttgca ggatgaggac atggcggcgg
     3361 cttgtgccgt ggatttttgc cttatccggc ctgttgctgg tagtcgtatt gattgccggg
     3421 cgcgaaatca atggcgcgac ccgttggata cctttgggtc cgttgaattt ccagccgacc
     3481 gagctgttca agctggcggt catcctttat ttggcaagcc tgttcacgcg ccgtgaagaa
     3541 gtgttgcgca gcatggaaag tttgggttgg cagtcgattt ggcgggggac ggccaatctg
     3601 atcatgtccg ccaccaatcc gcaggcacgt cgtgaaacat tagaaatgta cggccgtttc
     3661 cgggcgatca tcctgccgat tatgctggtg gcgttcggtt tggtgctgat aatggtacag
     3721 ccggatttcg gttcgtttgt cgtcattacc gtcattgccg ttggaatgct gtttttggca
     3781 ggattgccgt ggaaatattt tttcgtcctg gtaggcagcg tcttgggcgg gatggtgctg
     3841 atgattaccg ccgctcccta ccgtgtgcag cgggtagtgg catttttgga cccgtggaaa
     3901 gaccctcagg gtgccggcta ccagcttacc cactctctga tggcaatcgg gcgcggagag
     3961 tggttcggta tgggtttggg tgcgagtttg agcaaacgcg gctttctgcc ggaagcgcat
     4021 accgatttta tttttgccat catcgccgaa gaattcggtt tcttcggtat gtgcgtgctg
     4081 atattctgtt acggctggct ggtggtgcgg gcgttttcca tcggcaagca gtcgcgcgat
     4141 ttgggtttga ctttcaacgc ctatatcgct tcgggtatcg gcatttggat cggtatccaa
     4201 agtttcttca atatcggtgt gaacatcggt gctttgccga ccaaaggtct gacgctgccg
     4261 ttgatgtcct atggcggttc gtcagtcttt ttcatgctga tcagcatgat gctgctgttg
     4321 cgtatagatt atgaaaaccg ccggaaaatg cgcggttatc gggtggagta aatcatgggc
     4381 ggtaaaacct ttatgctgat ggcgggcgga acgggcggac atattttccc cgcgctggcg
     4441 gtggcggatt cattgcgcgc gcgcggccat catgtgattt ggctgggcag caaggattcg
     4501 atggaagagc gtatcgtgcc gcaatacggc atacgcttgg aaacgctggc gattaaaggc
     4561 gtgcgcggca acggcatcaa acgcaagctg atgctgccgt ttactttgta tcaaaccgtc
     4621 cgcgaagcgc agcggattat ccgcaaacac cgtgtcgagt gcgtcatcgg cttcggcggc
     4681 ttcgttacct tccccggcgg tttggcggcg aagctattag gcgtgccgat tgtgattcac
     4741 gagcaaaacg ccgtggcagg tttgtccaac cgccacctgt cgcgctgggc gaagcgggtg
     4801 ttgtacgctt ttccgaaagc gttcagccac gaaggcggct tggtcggcaa ccccgtccgc
     4861 gccgatatta gcaacctgcc cgtgcctgcc gaacgctttg aagggcgtga aggccgtctg
     4921 aaaattttgg tggtcggcgg cagtttgggc gcggacgttt tgaacaaaac cgtaccgcag
     4981 gcattggctt tgctgcccga caatgcgcgt ccgcagatgt accaccaatc gggacggggc
     5041 aagctgggca gcttgcaggc ggattacgac gcgctgggcg tgaaagccga atgcgtggaa
     5101 tttattaccg acatggtgtc cgcctaccgc gatgccgatt tggtgatttg ccgtgccggc
     5161 gcgctgacga ttgccgagtt gacggcggcg ggattgggtg cgttgctcgt tccgtacccc
     5221 cacgcggttg acgatcacca aaccgccaac gcgcgtttta tggtgcaggc ggaggcggga
     5281 ttgctgttgc cgcaaaccca gttgacggcg gaaaaactcg ccgaaatcct cggcagcctg
     5341 aaccgcgaaa aatgtctcaa atgggcagaa aacgcccgta ctttggcatt gccgcacagc
     5401 gcggacgacg ttgccgaagc cgcgattgcg tgtgcggcgt aaactgccga accatgccgt
     5461 ctgaaaagcc gttcagacag catggatgtt ttttatttca atccgctata tatttgtcag
     5521 aaaactatgg cgcgcaaacg gtcagccctt taaaataacg cctttatgca tcgaaaatcc
     5581 accggaacgc aacattatga tgaaaaatcg agtgaccaac atccattttg tcggtatcgg
     5641 cggcgtcggc atgagcggca tcgccgaagt cttgcacaat ttgggcttta aagtttccgg
     5701 ttcggatcag gcgcgaaatg ccgctaccga gcatttgggc agcttgggca ttcaagttta
     5761 tcccggccat accgcagaac acgttaacgg tgcggatgtc gtcgttacct ctaccgccgt
     5821 caaaaaagaa aatcccgaag ttgtcgctgc gttggagcag caaattcccg ttattccgcg
     5881 cgccctgatg ttggcggagt tgatgcgctt ccgtgacggc atcgccattg ccggcacgca
     5941 cggcaaaacc acgaccacca gcctgaccgc ctccatcctc ggcgcggcag gacttgaccc
     6001 gactttcgtt atcggcggca aactcaacgc cgcaggcacc aacgcccgct tgggcaaagg
     6061 cgaatacatc gttgccgaag ccgacgagtc ggatgcatcc tttctgcacc tgacaccgat
     6121 tatgtccgtc gttaccaata tcgacgaaga ccatatggat acctacgggc acagcgtcga
     6181 aaaactgcat caggcgttta tcgatttcat ccaccgtatg cccttctacg gcaaagcctt
     6241 tttgtgtatt gacagcgaac acgtccgcgc gattttgccc aaagtgagca aaccttatgc
     6301 tacttacggt ttggacgata ccgccgacat ctacgccacc gacatcgaaa acatcggcgc
     6361 gcaaatgaaa tttaccgttc atgtccaaat gaaaggacat gggcaagagc cgtttgaagt
     6421 tgttttgaat atgcccggca gacacaacgt cctcaatgcc ttggcggcta tcggcgttgc
     6481 gctggaagtc ggcgcatcgg tggaagccat ccaaaaaggg ctgctcggct ttgaaggtgt
     6541 cggccgccgc ttccaaaaat atggcgacat taagttgcca aacggtggaa ctgctttgct
     6601 ggtggacgat tacggacacc accccgtcga aatggcggcg acccttgccg ccgcacgcgg
     6661 cgcgtatccg gaaaaacgtt tggtactcgc cttccagccg caccgctata cccgcacgcg
     6721 cgatttgttt gaagacttta ccaaagtcct caataccgtt gacgcgctgg tgctgaccga
     6781 agtttatgcc gccggtgaag agccgattgc cgccgccgat tcccgcgctc ttgcccgcgc
     6841 catccgcgtg ttgggcaaac tcgagccgat ttactgcgaa aacgttgccg atctgcccga
     6901 aatgctgttg aacgttttgc aggacggcga catcgtgttg aatatgggtg cgggaagcat
     6961 caaccgcgtc cccgccgcgc tgctggaatt gtcgaaacag atttgaggca cacccgcctg
     7021 acagacggaa catcatataa aggtcgtctg aaaccgcaaa tcaggtttca gacgacctct
     7081 ggcaacaagc ataaagcaat caggaaagaa caaaaacaat gcagaatttt ggcaaagtgg
     7141 ccgtattgat gggcggtttt tccagcgaac gagaaatctc gctggacagc ggcaccgcca
     7201 ttttgaatgc tttaaaaagc aaaggcatag acgcatacgc tttcgatcct aaagaaaccc
     7261 cattgtctga attgaaggca caaggttttc agacggcatt caacatcctt cacggtactt
     7321 acggcgaaga cggggcggtt cagggtgcat tggaactgtt gggcattccc tataccggca
     7381 gcggtgtcgc cgcatccgcc atcggcatgg acaaataccg ctgcaaactg atttggcagg
     7441 cattgggact gcccgttccc gagttcgccg tcctgcacga cgacactgat ttcgatgccg
     7501 tcgaagaaaa attgggcctg ccgatgtttg tgaaaccggc ggccgaaggc agcagcgtag
     7561 gcgtggtaaa agtcaaagga aaaggccgtc tgaaaagcgt ttacgaagaa ttgaaacacc
     7621 ttcagggcga aatcattgcc gaacggttta tcggcggcgg cgaatattcc tgccccgtct
     7681 tgaacggcaa aggcctgccc ggcatacaca tcatccccgc gaccgagttt tatgactacg
     7741 aagccaagta caaccgcaac gacaccattt atcaatgtcc ttcggaagat ttgaccgaag
     7801 ccgaagaaag cctgatgcgc gaactggcgg ttcgcggcgc gcaggcaatc ggtgcggaaa
     7861 gctgcgtgcg cgtcgatttc ctcaaagata ccgacggcaa actctatctg ttggaaatca
     7921 acaccctgcc cggtatgacg agccatagtt tagtaccgaa atccgctgcc gttacgggcg
     7981 tgggttttgc cgatttatgt attgaaattt tgaagaccgc acatgtggga taatgccgaa
     8041 gcgatggaac ggctgacgcg ctggctgctt gtcatgatgg cgatgctgct tgctgcgtcc
     8101 gggctggttt ggttttacaa ttcgaatcat ctgcccgtca agcaggtgtc gctgaagggc
     8161 aacctggttt attccgataa gaagacattg ggcagtttgg cgaaagaata catccatggg
     8221 aatattttga ggacggacat caatggcgca caggaggcct accgccggta tccgtggatt
     8281 gcgtcggtca tggtgcgccg ccgttttccc gacacggttg aggtcgtcct gaccgagcgc
     8341 aagccggtcg cgcgttgggg cgaccatgcc ttggtggacg gcgaaggcaa tgtttttgaa
     8401 gcccgcttgg acagacccgg aatgccggta ttcagaggcg cggaaggaac gtctgccgaa
     8461 atgctccgcc gttatgacga attttcgact gttttggcaa aacagggttt gggcatcaaa
     8521 gagatgacct atacggcacg ttcggcgtgg attgtcgttt tggacaacgg catcaccgtc
     8581 aggctcggac gggaaaacga gatgaaacgc ctccggcttt ttaccgaagc gtggcagcat
     8641 ctgttgcgta aaaataaaaa tcggttatcc tatgtggata tgaggtataa ggacggattt
     8701 tcagtccgct atgcttccga cggtttaccc gaaaaagaat ccgaagaata gtgggaacag
     8761 gtatcggaca gattacggcc gtgccgtctg aaatggtgcg acgcaaattt caatcagttt
     8821 taagagcaga cgaacaatgg aacagcagca aagatacatc agcgtactgg atatcggtac
     8881 gtctaaagtc ctcgcactga tcggggaagt tcaagatgac gacaaaatca acatcgtcgg
     8941 tttggggcag gctccttcac ggggcttgcg cgcgggcatg gtaaccaata tcgatgccac
     9001 cgtccaagcc atcaggcagg cggtcaatga tgccgagctg atggcggata ccaaaattac
     9061 ccacgttacc acaggtatcg caggcaacca catccgcagt ctcaattcgc aaggtgtggt
     9121 taaaattaaa gacggggaag tcacgcaggc agacatcgac cgcgccattg aaacggcaaa
     9181 ggcaatcaat atcccgcccg atcaaaaaat tctcgatgcc gtggttcaag actacattat
     9241 cgacacccaa cttggcgtga gggagcccat cggtatgagc ggtgtgcgtc tggatacgcg
     9301 ggtgcacatc attaccggtg caagtacggc agtgcagaat gtccaaaaat gtatcgagcg
     9361 gtgcggcttg aaaagcgatc aaatcatgct tcagccgttg gcaagcgggc aggcggtgct
     9421 gactgaagat gaaaaagacc tcggcgtatg cgtcatcgac attggtggcg gaacgaccga
     9481 tattgccgtt tatatgaacg gtgccatccg ccatacgtcc gtcattccgg ccggtggtaa
     9541 tctgattacc aaagatttgt ccaaatcgtt gagaacacct ctcgatgccg ccgagtacat
     9601 taaaatccat tatggcgtgg catcatgcga tacggaaggc ttgggtgaga tgattgaagt
     9661 tccgggcgtg ggtgaccgga catcgcgtca ggtttccagt aaggttctgg cagcaatcat
     9721 cagtgcacgg attcaggaga tttttggcgt agtgctgggc gagctgcaaa aatcgggttt
     9781 ccccaaagaa gtgctgaatg cgggtatcgt tctgaccggc ggtgtgtcca tgatgaccgg
     9841 gattgtggaa tttgccgaaa aaatcttcga tttgcctgta cgcaccggtg caccccaaga
     9901 aatgggcggt ttgtccgacc gcgtccgcac accgcgtttt tctaccgcta tcgggctgct
     9961 tcatgcagca tgcaagctgg aaggaaactt gccgcagccg gaaaacggtg cagtgcaaga
    10021 gagggaaggg ggcggcggtt tgttggcaag attgaaacgg tggattgaaa acagcttctg
    10081 aacaggtgga ttgccgtttg acaggtgaga agtattttgc cagcagcaag atacttctta
    10141 tataatgaat aataatttat ttaaaccgtc ctctgaatgg ggcgagcagg agtttttgaa
    10201 tggaatttgt ttacgacgtg gcagaatcgg cagtcagccc tgcggtgatt aaagtaatcg
    10261 gcttgggcgg cggcggttgc aatgcaatca ataacatggt tgccaacaat gtgcgcggtg
    10321 tggagtttat cagtgccaat acggatgcgc agtctctggc aaaaaaccat gcggcgaaga
    10381 gaatccagtt gggtacgaat ctgacacgcg gtttgggcgc gggcgcgaat cccgatatcg
    10441 gccgtgcggc agcccaggaa gaccgggaag ccattgaaga agccattcgc ggtgcgaata
    10501 tgctgtttat cacgaccggt atgggcggcg gtaccggtac cggttccgcg ccggttgttg
    10561 ctgagattgc caagtctttg ggcattctga ccgttgccgt ggttacccga ccgttcgcat
    10621 atgaaggtaa gcgcgtccat gtcgcacagg cagggttgga acagttgaaa gaacacgtcg
    10681 attcgctgat catcatcccg aacgacaaac tgatgactgc attgggtgaa gacgtaacga
    10741 tgcgcgaagc cttccgtgcc gccgacaatg tattgcgcga tgcggtcgca ggcatttccg
    10801 aagtggtaac ttgcccgagc gaaatcatca acctcgactt tgccgacgtg aaaaccgtga
    10861 tgagcaaccg cggtatcgct atgatgggtt cgggttatgc ccaaggtatc gaccgtgcgc
    10921 gtatggcgac cgaccaggcc atttccagtc cgctgctgga cgatgtaacc ttggacggag
    10981 cgcgcggtgt gctggtcaat attacgactg ctccgggttg cttgaaaatg tccgagttgt
    11041 ccgaagtcat gaaaatcgtc aaccaaagcg cgcatcccga tttggaatgc aaattcggtg
    11101 cggctgaaga cgagaccatg agcgaagatg ccatccggat taccattatc gctaccggtc
    11161 tgaaagaaaa aggcgcggtc gattttgttc cggcaaggga ggtagaagcg gttgccccgt
    11221 ccaaacagga gcaaagccac aatgtcgaag gtatgatccg caccaatcgc ggtatccgca
    11281 cgatgaacct taccgctgcg gatttcgaca atcagtccgt acttgacgac tttgaaatcc
    11341 ctgcgatttt gcgtcgtcaa cacaattcag acaaataatg tgctgtttgc ccgtaaacct
    11401 gctgcctccc gaatcggttt gtccggtttg ggaggtatgt ttttcaagat gttgcaattt
    11461 cgtacggttt gcggtcggcg gattcagatt tttccacttg atacagactt tcagatatgg
    11521 acacttcaaa acaaacactg ttggacggga tttttaagct gaaggcaaac ggtacgacgg
    11581 tgcgtaccga gttgatggcg ggtttgacaa cttttttgac gatgtgctac atcgttatcg
    11641 tcaaccctct gattttgggc gagaccggca tggatatggg ggcggtattc gtcgctacct
    11701 gtatcgcgtc tgccatcggc tgttttgtta tgggttttgt cggcaactat ccgattgcac
    11761 tcgcaccggg gatggggctg aatgcctatt tcacctttgc cgtcgttaag ggtatgggcg
    11821 tgccttggca ggttgcgttg ggtgcggtgt tcatctccgg tctgattttc atcctgttca
    11881 gcttttttaa agtcagggaa atgctggtca acgcactgcc tatgggtttg aaaatgtcga
    11941 ttgctgccgg tatcggtttg tttttggcac tgatttccct gaaaggcgca ggcattatcg
    12001 ttgccaatcc ggcaaccttg gtcggtttgg gcgatattca tcagccgtcc gcgttgttgg
    12061 cactgttcgg ttttgctatg gtggtcgtat tgggacattt ccgcgttcaa ggcgcaatca
    12121 tcatcaccat cttgaccatt accgtcattg ccagcctgat gggtttgaat gaatttcacg
    12181 gcatcatcgg cgaagtaccg agcattgcgc cgacttttat gcagatggat tttgaaggcc
    12241 tgtttaccgt cagcatggtc agtgtgattt tcgtcttctt cttggtcgat ctatttgaca
    12301 gtaccggaac gctggtcggc atatcccacc gtgccgggct gctggtggac ggtaagctgc
    12361 cccgcctgaa acgcgcactg cttgcagact ctaccgccat tgtggcaggt gcggctttgg
    12421 gtacttcttc caccacgcct tatgtggaaa gcgcggcggg cgtatcggca ggcggacgga
    12481 ccggcctgac ggcggttacc gtcggcgtat tgatgctggc gtgtctgatg ttctccccat
    12541 tggcgaaaag tgttcccgct tttgccaccg cgcccgccct gctttatgtc ggcacgcaga
    12601 tgctccgcag tgcgagggat attgattggg acgatatgac ggaagccgca cccgcattcc
    12661 tgaccattgt cttcatgccg tttacctatt cgattgcaga cggcatcgcc ttcggcttca
    12721 tcagctatgc cgtggttaaa cttttatgcc gccgcaccaa agacgttccg cctatggtat
    12781 ggattgttgc cgtattgtgg gcactgaaat tctggtattt gggctgattg attcgatatt
    12841 aaaaatgccg tctgaaaggt tttcagacgg cattttgttt gccgatatat ttaattttta
    12901 ttaaattata taaaaatcaa atacataata aaatacatcg gattgcttaa aaataataca
    12961 ttgtttttat gtataaaata ttttataagt tttcaggatt ttgattatcg aaaatttttc
    13021 ttgatttcct gacaatttta ttgaaacaaa taattcaaaa ttaatctagt ttaatcatag
    13081 aattaaaata aaatattaaa attatgtaat gagtctcctt aaaaatgttt gacattttca
    13141 gtcttgtgtt ttagattatc gaaaaataaa actacataac actacaaagg aacattacta
    13201 tgaaaccaat tcagatgttt tccccttttc tgaataatcc ccttgttttc ttcttgtctg
    13261 cggttttgcc gcataattcc gaacggtctg ctgtttttct ttgattcgtt ttaaatatca
    13321 ataagataat ttttcccata tatttttaat gattggattg ggatgcccga tgcgtcggat
    13381 ggatgtgttt tgccgtccga atgtgatgga agcctgtcca tactgaaaaa agtctataaa
    13441 ggagaaatat gatgagtcaa cactctgccg gagcacgttt ccgccaagcc gtgaaagaat
    13501 cgaatccgct tgccgtcgcc ggttgcgtca atgcttattt tgcacgattg gccacccaaa
    13561 gcggtttcaa agccatctat ctgtccggcg gcggcgtggc agcctgttct tgcggtatcc
    13621 ctgatttggg cattaccaca atggaagatg tgctgatcga cgcacgacgc attacggaca
    13681 acgtggatac gcctctgctg gtggacatcg atgtgggttg gggcggtgca ttcaatattg
    13741 cccgtaccat tcgcaacttt gaacgcgccg gtgttgcagc ggttcacatc gaagatcagg
    13801 tagcgcaaaa acgctgcggc caccgtccga acaaagccat tgtatctaaa gatgaaatgg
    13861 tcgaccgtat caaagctgcc gtagatgcgc gcgttgatga gaacttcgtg attatggcgc
    13921 gtaccgatgc gctggcggta gaaggtttgg atgccgctat cgaacgcgcc caagcttgtg
    13981 tcgaagccgg tgcggacatg attttccctg aagccatgac cgatttgaac atgtaccgcc
    14041 aatttgcaga tgcggtgaaa gtgcccgtgt tggcgaacat taccgagttt ggttccactc
    14101 cgctttatac ccaaagcgag ctggctgaaa acggcgtgtc gctggtgctg tatccgctgt
    14161 catcgttccg tgcagcaagc aaagccgctc tgaatgttta cgaagcgatt atgcgcgatg
    14221 gcactcaggc ggcggtggtg gacagtatgc aaacccgtgc cgagctgtac gagcatctga
    14281 actatcatgc cttcgagcaa aaactggata aattgtttca aaaatgattt accgctttca
    14341 gacggccttc caatctatcc gcatcggccg tctgaaaatt gaaaatccat aaaaaacaaa
    14401 ggagaaatac gatgactgaa actactcaaa ccccgacttt caaacctaaa aaatccgttg
    14461 cgctttccgg cgttgcggcg ggtaatacag cattgtgtac cgtcggccgt accggcaacg
    14521 atttgagcta tcgcggttac gacatcttgg atttggcaca aaaatgcgag tttgaagaag
    14581 tcgcccacct gctgattcac ggtcatttgc ccaacaaatt cgagctggcc gcttataaag
    14641 ccaagctcaa atccatgcgc ggcctgccta tccgtgtgat taaagttttg gaaagcctac
    14701 ctgcacatac ccatccgatg gatgtgatgc gtaccggcgt atccatgctg ggctgcgttc
    14761 atcctgaacg tgaaagccat ccggaaagcg aagcgcgcga catcgccgac aaactgatcg
    14821 ccagcctcgg cagcatcctc ttgtactggt atcaatattc gcacaacggc aaacgcattg
    14881 aggttgaaag cgacgaagag accatcggcg gtcatttcct gcaactgttg cacggcaaac
    14941 gcccaagcga atcccacatc aaagccatgc acgtttcact gattctgtat gccgaacacg
    15001 agttcaacgc ttctaccttt accgcccgcg tgatcgccgg tacaggctct gatatgtact
    15061 ccagcattac cggagcaatc ggcgcgttga aaggtccgaa acacggcggc gcgaacgaag
    15121 tggcttacga tattcaaaaa cgctaccgca atgccgacga agctgaagcc gacatccgcg
    15181 aacgcatcgg ccgcaaagaa atcgtgatcg gtttcggtca tccggtgtac accatttccg
    15241 accctcgcaa cgttgtcatt aaagaagtgg cacgcggttt gagcaaagaa accggcgata
    15301 tgcgcctctt tgacattgcc gaacgtttgg aaagcgtgat gtgggaagag aaaaaaatgt
    15361 tcccgaatct ggactggttc tctgccgttt cctaccaaaa attgggcgta ccgaccgcta
    15421 tgttcacacc gctgttcgta atttcccgta caaccggttg gagcgcacac gttcttgagc
    15481 aacgcaaaga cggcaaaatc atccgtccga gcgcaaacta cacaggccct gaagatttgg
    15541 cgtttgtgga gattgaagaa cgctaatacg cgtaacagca gggtgggccg ccagcccgcc
    15601 ccatctcgaa atgccgtttg aaaacaatga ataaatgatg ttttcgtttt tcgatggcct
    15661 agtgcagtat gcgagagaga gccggccgtt tggaaaacat gctgctctgc tgtcgtcatt
    15721 cccatacagg cagaaattca aaagttgaaa tgttctgctg taaagagtgc tgaaagattt
    15781 aagtttggat ttccgtctat acgggaatga tggtagcgga gcagcaattt ttttcatacc
    15841 gcgaatagat ttcagataac aagcaataaa acagaattta tggtttcaga cggcctgaag
    15901 gtccgaatca acaggccgtc tgaaaaaaga aatttaatga atttattggc atactaatta
    15961 ttaatgcgga acatttgatg gataaggaca aggggtctta tgctggtatt cccgtacaaa
    16021 ataccaaaga gttagtttgg cagaaaatac aagaaatacc tatttctgaa tgtggggaac
    16081 cgttggtcag tgttggtaat accggacgca ttcgtgtcaa tcctgtttat ttttcccagg
    16141 gtattgaagg tgcaataaat actgttttat tgcgtagaag tgttgctgat aggctgactc
    16201 aggttgtctc tttgctgcca gaaatgtacg gattggaaat ttttgatggt tggcgtcctg
    16261 tcatagtgca aagagcatta cgagaaaata tgaagcaaga aattgaaaaa cgccatccgg
    16321 aatatgatga agttcaagtt agagaagcac tggactgttt tgctgctgat ccagatcggg
    16381 caggaatgcc tctgccccat ttgacaggcg gatctgttga tgtcggattg tttgatataa
    16441 aaagtggcaa aagtttggat atgggaagtg agtttgatgc aaccggacat ttatcttata
    16501 gcgatgcttt agagaaagaa ggtgagtatt tctcctctgc tcgtaattta cgccggattt
    16561 tgattcatgc gatgaaagag gcaggattta gtaatttgcc aaccgaatgg tggcatttcg
    16621 attatggcaa ccaaaattgg gcttatttta cccaacaaag caacgcagtt tttggggcgg
    16681 tagaagagca ggatacttaa attaaaataa aaattgggag gaaaaatgca aactttaatt
    16741 tcagcagata atcatttgct gctgtgggct tttgttatgt tagctgccgc tgctgcgatt
    16801 tttattgagc aaaacagtcg cttggctggg aaagtccctg gtgcagtatt agctttattg
    16861 attgcgttga ttgcttctaa tttgggtgtt attccgacgg atgctccagt atttgatgct
    16921 gtatggtctt atattgtacc tcttgctatt ccgttgttat tgtttcaatt agatcttcat
    16981 gctctattta aggaaagtgg acgtatgctg tttattttcc tgattagttc actagggacg
    17041 gtcattggaa cgcttgtctc atttgcacta ttgaaaaact atattcctga actagataag
    17101 gtagctggca tgatttcagc atcttatacg ggaggtggtg ttaattttgc agctatgtca
    17161 gctaagctta accctgctaa agatgttatt gcagcaacaa ttgttgctga taatttgatg
    17221 atggcttgtt acttttttat tttgattggt atctcttcct catattgggt cagaaaagtt
    17281 tggggaagtc catatcagga taaattggag caggaatatc atgatccgag tgtgaataag
    17341 gctgccgagt attggaaacc taaatccatt tcgctacaga gtatagcctt atctttggct
    17401 gcctcgattt tgttggtcgc agtttcattc tcattatcca gttttttgca aaatcatttt
    17461 caaagtgttg atggtgttgc attaaaaatg ctgacaggtt taattagtga caaatatttg
    17521 ctgttaacga catttacatt ggcagttgtt ttatttttcc gtaaaggcat tcaaaaacta
    17581 gatggcagtc aagaattagg gacatattgt atttatctgt tttttgttgt gattggtgtt
    17641 cctgcctcta taccgttaat tattaaaaca gcaccattac tctttgtttt tactttgatt
    17701 attgcggtat tgaatttgtt actgacgtta gtgttaggca agctgttcaa attcagtatt
    17761 gaagaaattg tattggcttg taatgccaat attggagggc cgactactgc agcagcctta
    17821 gccatcagta aaggttggcg tgatttagtc ggtgcaattt tgttaattgg tactgtaggc
    17881 tacattatcg gtaactatat aggttcgttt gtatatgccc tattgagctg aagactaatc
    17941 taacaatcca tgaacctttt cagacgaccc ccttcaaaaa acgtcgtctg aaaccccaaa
    18001 ccacaagaaa aatagatcca caggagaact gaacatggct gccaaccaac gttaccgcaa
    18061 accgctaccc ggtacggatt tggaatacta cgacgcgcgt gcggcgtgtg aggacatcaa
    18121 acccggctct tacgacaagc tgccttatac aagccgtatc ttggctgaga acttggtcaa
    18181 ccgcgcagac aaagtcgacc tgccgacgct gcaaagctgg ctgggccagt tgatagaagg
    18241 gaagcaggaa atcgactttc cgtggtatcc cgcgcgggtg gtgtgccacg atattctggg
    18301 gcagaccgcg ctggtggatt tggcgggctt gcgcgatgcg attgccgaaa aaggcggcga
    18361 tcctgccaaa gtgaatccgg tggtgcaaac ccagcttatc gtcgaccact ctctggcggt
    18421 ggagtgcggc ggttacgatc ctgatgcctt ccgcaaaaac cgcgaaatcg aagaccggcg
    18481 caacgaagac cgtttccact tcatcaactg gacaaaaacc gcatttgaaa atgtggacgt
    18541 gattccggcg ggcaacggca ttatgcacca aatcaatctg gaaaaaatgt cgcccgtcgt
    18601 ccaagtcaaa aacggcgtgg ctttccccga tacctgcgtc ggcacggatt cgcacacgcc
    18661 acacgtcgat gcgctgggcg tgatttccgt aggcgtgggc ggtttggaag ccgaaaccgt
    18721 aatgttaggc cgtgcatcca tgatgcgtct gcctgatatt gtcggcgttg agttgactgg
    18781 caaacgtcaa cctggcatta ctgccaccga catcgtgttg gcactgaccg aattcttgcg
    18841 taaagagcgc gtggttggcg catttgtcga attcttcggc gagggcgcaa gaagcctgtc
    18901 tatcggcgac cgagccacta tttccaacat gacccctgag ttcggcgcga ctgccgcgat
    18961 gttcgctatt gatgagcaaa ccattgatta tttgaaactg acaggccgcg acgacgcgca
    19021 agtgaaattg gtggaaacct acgccaaaac cgcaggcttg tgggcagatg ccttgaaaac
    19081 cgccgtttat cctcgcgtat tgaaatttga tttaagcagc gtaacgcgca acatggcagg
    19141 cccaagtaac ccgcatgccc gttttgcgac tgccgatttg gccggcaaag gcttggctaa
    19201 accttatgaa gagccttcag acggccaaat gcctgacggt gcagtgatta ttgccgcgat
    19261 tacttcctgt accaatactt ccaatccgcg caacgttgtc gccgccgcgc tgttggcacg
    19321 caatgccaac cgcctcggct tgcaacgtaa accttgggtg aaatcttcgt ttgccccggg
    19381 ttcaaaagta gccgaaatct atttgaaaga agcaggccta ctgcctgaaa tggaaaaact
    19441 cggcttcggt atcgttgcct tcgcatgtac cacctgtaac ggcatgagcg gtgcgctgga
    19501 tccgaaaatc caaaaagaaa tcatcgaccg cgatttgtac gccaccgccg tattatcagg
    19561 caaccgcaac ttcgacggcc gtatccaccc gtatgcgaaa caggctttcc tcgcttcgcc
    19621 tccgttggtc gttgcctacg cgctggcagg cagtatccgt ttcgatattg aaaacgacgt
    19681 actcggcgtt gcagacggca aggaaatccg cctgaaagac atttggcctg ccgatgaaga
    19741 aatcgatgcc gtcgttgccg aatatgtgaa accgcagcag ttccgcgatg tgtatgtacc
    19801 gatgttcgac accggcacag cgcaaaaagc acccagtccg ctgtacgatt ggcgtccgat
    19861 gtccacctac atccgccgtc cgccttactg ggaaggcgcg ctggcagggg aacgcacatt
    19921 aagaggtatg cgtccgctgg cgattttgcc cgacaacatc accaccgacc acctctcgcc
    19981 gtccaatgcg attttggccg tcagtgccgc aggcgagtat ttggcgaaaa tgggtttgcc
    20041 tgaagaagac ttcaactctt acgcaaccca ccgcggcgac cacttgaccg cccaacgcgc
    20101 taccttcgcc aatccgaaac tgtttaacga aatggtgaaa aacgaagacg gcagcgtgcg
    20161 ccaaggctcg ttcgctcgcg tcgaacccga aggcgaaacc atgcgcatgt gggaagccat
    20221 cgaaacctat atgaaccgca aacagccgct catcatcatt gccggtgcgg actacggtca
    20281 aggctcaagc cgcgactggg ctgcaaaagg cgtacgcctc gccggcgtgg aagcgattgt
    20341 tgccgaaggc ttcgagcgta tccaccgcac caacttgatc ggtatgggcg tgttgccgtt
    20401 gcagttcaaa ccgggtacca accgccatac cctgcaactg gacggtacgg aaacctacga
    20461 cgttatcggc gaacgtacac cgcgctgcga cctgaccctc gtgattcacc gtaaaaacgg
    20521 agaaaccgtc gaagttccgg ttacctgccg cctcgatact gcagaagaag tattggtata
    20581 tgaagccggc ggcgtgttgc aacggtttgc acaggatttt ttggaaggga acgcggctta
    20641 gaggtcgtct gaaaagcaag acgtagcgtg ggtcgggttc aacattttgc tcattcacgt
    20701 aattctcgat atggcaggca tctactgtaa atcgtcattc ccgcgcaggc gggaatccag
    20761 aaagtggaat tgaggaaacc ttatttatcc gatgagtttc tgtgcggata aatctggatt
    20821 cccgcctgcg cgggaatgac ggggtttaat aatctgccgt atcacaacac agtagccgta
    20881 gattgtggcg aaccccgaca gtttgcggaa tcaaacggct ttggtcggag tggcagccta
    20941 atccactata aaaatcgtgg gcagagccca cgctacataa ggagaatcta gaaatgccgc
    21001 aaattaaaat ccccgccgtt tactaccgcg gtggcacatc aaaaggcgtg tttttcaaac
    21061 gttccgacct gcccgaggcg gcgcgggaag cgggaagcgc acgcgacaaa atcctcttgc
    21121 gcgtactcgg cagcccggat ccctacggca agcagataga cggtttgggc aacgctagct
    21181 cgtccaccag caaggcggtg attttggaca agtccgaacg cgccgatcac gatgtcgatt
    21241 accttttcgg gcaagtttcc atcgacaaac cttttgtcga ttggagtggc aactgcggca
    21301 acctcaccgc tgccgtgggc gcattctcca ttgaacaggg cttggtcgat aaaggcaaga
    21361 ttccttcaga cggcatctgc acggtcaaaa tctggcagaa aaacatcggc aaaaccatta
    21421 ttgcccatgt accgatgcaa aacggcgcag ttttggaaac aggcgatttt gagctcgacg
    21481 gcgtaacgtt cccggcagcc gaagtacaaa tcgaatttct tgatccagcc gacggtgaag
    21541 gcagtatgtt cccaaccggc aatttggtcg atgaaattga tgtgccgaat ataggccgtt
    21601 tgaaagccac gctcatcaac gcgggcattc cgaccgtttt cctgaatgcc gccgacttgg
    21661 gctacacggg caaagagttg caagacgaca tcaacaacga tgccgcggct ttggaaaaat
    21721 tcgagaaaat ccgcgcttac ggtgcgctga aaatgggtct gatcagcgac gtatccgaag
    21781 ctgccgcccg cgcgcacacg ccgaaagtcg ccttcgtcgc gcccgccgcc gattacaccg
    21841 cctccagtgg caaaaccgtg aacgccgccg acatcgattt gctggtacgc gccctgagca
    21901 tgggcaaatt gcaccacgcg atgatgggta ccgcctctgt tgccattgcg accgccgccg
    21961 ccgtgcccgg tacgctggtc aaccttgccg caggcggcgg aacgcgtaaa gaagtgcgct
    22021 tcgggcatcc ttccggcaca ttgcgcgtcg gtgcagccgc cgaatgtcag gacggacaat
    22081 ggacggccac caaagcggtt atgagccgta gcgcacgcgt gatgatggaa ggttgggtca
    22141 gggtgccgga agattgtttt taaattgacg tagcatgggt ttgcccgcga gccataaaca
    22201 ggtcgtctga aaaacaagta aacatcaaat cactgaccat tcctttccct tgccctgtgg
    22261 cggaaggcgg caaatcacaa ggaagaacac ggaaaccccg ataaaagaca gcttcccgta
    22321 ttaccgtcat tcccgcgcag gcgggaatct agacctgtca atatggagga ttggtagggg
    22381 aaaacaggtt tcgtgagttc tacattctgg attcccgcca cagcctgtcc tcgcgtaggc
    22441 ggggacggaa taacgataga aaatgcggca tacgctttgc ccaaagaggc cgtctgaaac
    22501 accttgcgcc tgatgtctgc ctttttcaga cgaccccaca ccaaaaaaac aaccacaaac
    22561 tacaaggaga aacatcatgt ccgaccaact catcctcgtt ctgaactgcg gcagttcatc
    22621 gctcaaaggc gccgttatcg accgaaaaag cggcagcgtc gtcctaagct gcctcggcga
    22681 acgcctgacc acgcccgaag ccgtcattac gttcaacaaa gacggcaaca aacgccaagt
    22741 tcccctgagc ggccgaaatt gccacgccgg cgcggtgggt atgcttttga acgaactgga
    22801 aaaacacggt ctgcacgacc gcatcaaagc catcggccac cgcatcgccc acggcggcga
    22861 aaaatacagc gagtctgttt tgatcgacca ggccgtaatg gacgaactca atgcctgcat
    22921 tccgcttgcg ccgctgcaca accccgccaa catcagcggc atccttgccg cacaggaaca
    22981 tttccccggt ctgcccaatg tcggcgtgat ggatacttcg ttccaccaaa ccatgccgga
    23041 gcgtgcctac acttatgccg tgccgcgcga gttgcgtaaa aaatacgctt tccgccgcta
    23101 cggtttccac ggcaccagta tgcgttacgt tgcccctgaa gccgcacgca tcttgggcaa
    23161 acctctggaa gacatccgca tgattattgc ccacttaggc aacggcgcat ccattaccgc
    23221 catcaaaaac ggcaaatccg tcgataccag tatgggtttc acgccgatcg aaggtttggt
    23281 aatgggtaca cgttgcggcg acatcgatcc gggcgtatac agctatctga cttcccacgc
    23341 cgggatggat gttgcccaag tggatgaaat gctgaacaaa aaatcaggtt tgctcggtat
    23401 ttccgaactt tccaacgact gccgcaccct cgaaatcgcc gccgacgaag gccacgaagg
    23461 cgcgcgcctc gccctcgaag tcatgaccta ccgcctcgcc aaatacatcg cttcgatggc
    23521 tgtggcctgc ggcggcgttg acgcactcgt gttcaccggc ggtatcggcg aaaactcgcg
    23581 taatatccgt gccaaaaccg tttcctatct tgatttcttg ggtctgcaca tcgacaccaa
    23641 agccaatatg gaaaaacgct acggcaattc gggcattatc agcccgaccg attcttctcc
    23701 ggctgttttg gttgtcccga ccaatgaaga actgatgatt gcctgcgaca ctgccgaact
    23761 tgccggcatc ttgtagccaa aaaagggacg agtccgcaaa aatgccgtct gaaattttca
    23821 gacggcattt tgtttggatt ttgggcgtac aatacggaaa acatgacgat aaggacacaa
    23881 actatggcac agtttttcgc tattcatccc gacaaccccc aagaacgcct catcaagcag
    23941 gcggtcgaaa tcgtcaataa aggcggcgtg gtcgtttatc cgaccgattc ctgttatgcc
    24001 ttgggctgca aactcggcga taaggcggcg atggaacgca tactctccat ccgcaaaatc
    24061 gatttgaaac accacctgac cctgatgtgc gccgatttga gcgagttggg cacgtacgcc
    24121 aaaattgaca acgtacagtt tcgtcagctt aaagccgcca cacccgggcc ttatactttt
    24181 attttacagg cgacgaagga tgtgccggcg cgcacgctgc acccgaaacg caaaaccatc
    24241 gggctgcgta ttcccgataa tgccattgca caagccctgc tgggggaatt gggcgagccg
    24301 cttttaagct gcaccctgat gctgcccgaa gacggcgaac cattgaccga tccttatgaa
    24361 atccgcgagc gtttggaaca cgccgtcgat ttggtaattg acggcggctg gtgcggaacc
    24421 gagccgacca ccgtcgtcga tatgaccgac ggcacggaat tggtgcgccg aggttgcggc
    24481 gatacggcgg tgttcggttt gtagggaaac cgatgccgtc tgaagcatcg gctgttcaga
    24541 cggcattgcg cgccttgccg gcggcagtcc gaaatgccgg cgcgtatcgc gctcggtcgg
    24601 aatatccgtt tgaaacggca ttttgatgca ttactgcacc gcaatcggaa ttctcggttc
    24661 gtagagcagg tcgtaggtcg gcttgttgag caggtcttgg agcgtgaaac cgtccagata
    24721 cgtgaaaaac gacttcatcg cgccgccgag tatgcccgtc agccggcagg acggtgtaat
    24781 caggcattcg ttgttctcgc ccatgcactc gaccagctgc atcggttcga ggtggcggac
    24841 aaccgagccg atgttgatgc ggtcgggcgg tgcggcaagc cgcagaccgc cgccttttcc
    24901 gcgcacactg tggaggaagc cgcctttgac cagcgcggta acgaccttca tcagatggct
    24961 tttggaaatg ccgtaggtta cggcgatggt actgatgttg accagcgcat cgtcgttgat
    25021 ggcagtgtag ataaggacgc gcagcccgta gtccgtatgt tgtgtcaaat acatgatttt
    25081 ctcggtatgg attgttattc ttatcggtac ggtttaaggt tcacggacaa taccttaatg
    25141 gttgaaaccc tgtccgtcgg ggcggtagaa tgcagcctgt ctgcggcggt atgccgtctg
    25201 aaacatccgc gctaccgttt gataatttgt tattgtaact caaaatcatg aaaccgttga
    25261 aacgacatcc cgcccttatc gggctttcgc gtgaccacca ccattcgctt tccctgtgcg
    25321 tgcgtctgtt gcggacgccg gaagaaaggc atcgggacga actcgaaccg cattttgccg
    25381 aattggaaac ccattttcgc gaagaagaag ccaagtttgc cccaatttgg cagaatgtcg
    25441 cccctgaatt gaaacaacgt ttcgagaaag accacgcccg actgcggcag atgatggcaa
    25501 gccccgaata cggtaacgcg gcgtggaata ccgcttttgc cacaaccctg cgcgaccacg
    25561 cgcgctttga agaacgcgag ctgtttcccg ccgccgaacc gtttttgccg gcatgattcc
    25621 gttttgcggc aaatatatta atgataaaca aggaacacac atgaaattta ccaagcaccc
    25681 cgtctgggca atggcgttcc gcccgtttta ttcgctggcg gctctgtacg gcgcattgtc
    25741 cgtattgctg tggggtttcg gctacacggg aacgcacgag ctgtccggtt tctattggca
    25801 cgcgcatgag atgatttggg gttatgccgg actggtcgtc gtcgccttcc tgctgaccgc
    25861 cgtcgccact tggacggggc agccgcccac gcggggcggc gttctggtcg gcttgactat
    25921 cttttggctg gctgcgcgga ttgccgcctt tatcccgggt tggggtgcgt cggcaagcgg
    25981 catactcggt acgctgtttt tctggtacgg cgcggtgtgc atggctttgc ccgttatccg
    26041 ttcacagaat caacgcaact atgttgccgt gttcgcgctg ttcgtcttgg gcggcacgca
    26101 cgcggcgttc cacgtccagc tgcacaacgg caacctaggc ggactcttga gcggattgca
    26161 gtcgggcttg gtgatggtgt cgggttttat cggtctgatt ggtacgcgga ttatttcgtt
    26221 ttttacgtcc aaacggttga atgtgccgca gattcccagt ccgaaatggg tggcgcaggc
    26281 ttcgctgtgg ctgcccatgc tgaccgccat gctgatggcg cacggcgtga tgccttggct
    26341 gtcggcggct ttcgcgtttg cggcaggtgt gatttttacc gtgcaggtgt accgctggtg
    26401 gtataaaccc gtgttgaaag agccgatgct gtggattctg tttgccggct atctgtttac
    26461 cggattgggg ctgattgcgg tcggcgcgtc ttatttcaaa cccgctttcc tcaatctggg
    26521 tgtgcatctg atcggggtcg gcggtatcgg cgtgctgact ttgggcatga tggcgcgtac
    26581 cgcgctcggt catacgggca atccgattta tccgccgccc aaagccgttc ccgttgcgtt
    26641 ttggctgatg atggcggcaa ccgccgtccg tatggttgcc gtattttctt ccggcactgc
    26701 ctacacgcac agcatacgca cctcttcggt tttgtttgca ctcgcgcttt tggtgtatgc
    26761 gtggaagtat attccttggc tgattcgtcc gcgttcggac ggcaggcccg gttgagacaa
    26821 accgccgcag atttcgggtc tgggcggttt gcttttcaga cggcagggcg gtcagttgcc
    26881 gtccagccag cggtcgcgtg tggttttggc ttcttcaaaa tagcggtaca gggcttcgcg
    26941 gtcgtcggcg gtcaggatgt ctgccaaaac gtccaactgt ttgcccaagc cttgaaccag
    27001 ttgcagcagg ctgtctttgt tggcaaggca gatgtccgcc cacacggcgg gatgaccgga
    27061 ggcgatgcgg gtgaagtccc gaaagcccgt ggcggcgaat ttcagatatt cctgtccgtc
    27121 ggggtggtcg agaatctggt ggacataggc gaaggcggtc aggtggggca tatgggagac
    27181 ggcggcgaaa accgcgtcgt ggcgttgcgc gtccatcgta taaatttccg caccgaccgc
    27241 gtgccacagg ttttctatca aggcaatgcc gtctgaatgt tcgccgccgt gtggcgtgat
    27301 gatgagtttt ctgtggcgga acagcccgaa ctgcgcggct tgcgcaccgc ttctgtccga
    27361 accggcaatc gggtgggcgg cgatgcagcg gtgcaggcgg tcgggcagac agcggcggaa
    27421 ggcttcgatg accgaagatt tggtgctgcc gacatcggaa atccaagtgt gttccggcaa
    27481 aacggggcgc agcgcggtca aaatggcggg aaaggtggcg acgggcgtgg caatcagtac
    27541 caagtctgca ccaccgatgc tgtccgcgtc gatggcaacg gaagcccggt caatcacgcc
    27601 gcgttccaat gcacgttcga ggttgtcgcg gtcggtgtcg ataccggtaa cggtgcggac
    27661 gagtccctgc cttttgaggt cgagaacgaa cgaaccgccg atcagcccta caccgatgag
    27721 ggcaatatgg ttcaaaatgg gcatttgtgt aaacggtttt cgcaaagtac cgtcatggta
    27781 gcctatcggc ggaatatgcc gcaaggtcgg caggaaaaag gagaagaaat ggacaaaatc
    27841 agagttgccg ccgtgcagat ggtgtcgggc gtgtcgccgg aaaccaacgt cgccgccatg
    27901 aaacgcctgg tcgcacgggc ggcggagcag ggtgcggatt gggtgctgct gcccgaatat
    27961 tgggtgctga tgggcgcaaa cgataccgac aaactcgcgc ttgccgagcc tttgggcggc
    28021 ggacgctttc agacggcatt gagcgaaacg gcgaaagaat gcggcgtggt gctgttcggc
    28081 ggaaccgtgc cgctgcaaag ccccgaggcg ggcaaggtca tgaatacttt attggtgtac
    28141 gggcgcgacg gcaaacggac ggggctgtac cacaaaatgc acctcttcgg cttttccggt
    28201 ttgggcgaac gctatgccga agccgatacc atccgcgcgg gcggggatgt gccgcacttg
    28261 tcggcagaag gcgtgtcggt ggcggcgggc atttgttacg atgtccgctt tcccgaattt
    28321 ttccgccgcc agctgccgtt tgacgtattg atgctgcccg ctgcgtttac gcacacgacg
    28381 ggcaaggcgc attgggagct gctgctgcgc gcgcgtgccg tcgaaaacca atgttacgtc
    28441 gtggcggcgg cacagggcgg tttgcacgaa aacggacggc gcacgttcgg acacagcatg
    28501 attgtcgatc cgtggggcga cgtgttggac gtattgcccg aaggcgaagg cgttgttacg
    28561 gcagacatcg atgccaaccg cctgaacagc gtccgcaacc gcctgcccgc cttgaaatac
    28621 cgggttttgg atgccgtctg aaggttcaga cggcatcggt gccggggaat cagcgggctg
    28681 taggatgggc ttcagcctgc catttccatc aatcccacat ttctaccgtt ttcatcgaat
    28741 ccatcgaatc cgcccctttc gacgccccag tcctacgcaa ctgaaccgtc attcccacgg
    28801 aagtgggaat ctagaatctc gggggtttca gtcatttccg atagattccc gccgcgtcag
    28861 gggtctggat tcccgcctgc gcgggaatga cgaatttcga gattacggtg ttgtcggagc
    28921 gcaactgaac cgtcattccc acggaagtgg gaatctagaa tctcgggggt ttcagtcatt
    28981 tccgatagat tcccgccgcg
//
LOCUS       DAWGBY010000011        27843 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.011, whole genome shotgun sequence.
ACCESSION   DAWGBY010000011 DAWGBY010000000
VERSION     DAWGBY010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.011"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(147..944)
                     /locus_tag="WHG62_000454"
     CDS             complement(147..944)
                     /locus_tag="WHG62_000454"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ1724616.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVKTVLARLPLTAP
                     QIESEPESEPASQAASVETAANPSAEQRQIEATAAKIQAAVQDVLKD"
     gene            1099..3948
                     /gene="uvrA"
                     /locus_tag="WHG62_000455"
     CDS             1099..3948
                     /gene="uvrA"
                     /locus_tag="WHG62_000455"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ1724617.1"
                     /translation="MCKHHPQHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKANIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPEKVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPGRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDSGGRIIAQGSPEEVAKVKGSYTGKYLKVVLG"
     gene            3990..5174
                     /locus_tag="WHG62_000456"
     CDS             3990..5174
                     /locus_tag="WHG62_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ1724618.1"
                     /translation="MIEWRFDQGRLDYFRFDEIKKIAKGLYGINQCPKPRAKDIDIVR
                     LSLTQETNLPFAPNSSQYPVWRNYGRVFKCLLLATEHNGLICTTDLCADLVQNDEISC
                     DDYLLHFATHFSYPSPAFSGYQPSENRVFPVLAIIRALISKYKETGVNFLDMDEIIYK
                     IASNNSITGIASFSFSQLIMNKEAIKYDPRQIRELVKFISQFSFLSWYENKLFLDITD
                     FSELHLLENQFIADTQPQERLDSLEIMRLGKTNNNFLLMNEIVSLSIDDQAFSEGGKI
                     KVTHLITERNSILRKIYFSKTQNAQICRMCGLDTQRSYEWSEHIIEVHHLLPLSSPVR
                     VEDKTTSLKDLVGICPTCHRATHKYYTFWLNLHKKKDFVSYEEAYHVYEEAKSKVKRI
                     YK"
     gene            5187..6389
                     /gene="dcm"
                     /locus_tag="WHG62_000457"
     CDS             5187..6389
                     /gene="dcm"
                     /locus_tag="WHG62_000457"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ1724619.1"
                     /translation="MLIPQTSLFDQENNRIISQRKLLEQSLLQGIPLNELIRQNQMSY
                     DDLIYIHHDKKPFEKRKNLVLSDFQKKENHIPIISFFSGAGGLDLGFEAAGFQHSMLI
                     EKIPLFCDTLRLNRPNWSVFNADVSETEEMVELIRNNIGSLSFDGVFIGGPPCQPFSI
                     ASNQRFSKTDKNFKRVGFEHKQNGNLLFNYVELIKIFRPKVFLIENVSGLMDIDNGKQ
                     LASVYCDLQQQGYSLYKPQIINSEYFHVPQQRIRLFIIGYLGDKKFSPLQPTNTPLAC
                     GNTFEIPIINQHNHITREHSAESILRYMELAYGQRDKKGRVDRLDPSKPSKTIIAGGT
                     KGGGRSHLHPYIPRTLSVRESARLQTFPDDYIFTGAVARQFTQVGNAVPPILAAQLAT
                     AIKHSYFE"
     gene            6675..6818
                     /locus_tag="WHG62_000458"
     CDS             6675..6818
                     /locus_tag="WHG62_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724620.1"
                     /translation="MARYRRNFIAGGTFFFTVKLADPKSRLLVEHIGFAYGLYGCAKT
                     ISL"
     gene            6790..7257
                     /locus_tag="WHG62_000459"
     CDS             6790..7257
                     /locus_tag="WHG62_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1724621.1"
                     /translation="MDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPYTKNLSAGKQRRNERGIWQRRFYEHTVRDETDLQCYADYIHSNPIKQRMSRA
                     KTESCKNNISLFKCDTYHSLTSKKYVQPDLRVCSCLTDKYSDCLKGQKIMWVC"
     gene            complement(7353..8243)
                     /gene="sucD"
                     /locus_tag="WHG62_000460"
     CDS             complement(7353..8243)
                     /gene="sucD"
                     /locus_tag="WHG62_000460"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ1724622.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(8254..9420)
                     /gene="sucC"
                     /locus_tag="WHG62_000461"
     CDS             complement(8254..9420)
                     /gene="sucC"
                     /locus_tag="WHG62_000461"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ1724623.1"
                     /translation="MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVDVPVVVRLEGNNAVLGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            complement(9519..9806)
                     /locus_tag="WHG62_000462"
     CDS             complement(9519..9806)
                     /locus_tag="WHG62_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724624.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            complement(9931..11364)
                     /gene="lpdA"
                     /locus_tag="WHG62_000463"
     CDS             complement(9931..11364)
                     /gene="lpdA"
                     /locus_tag="WHG62_000463"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ1724625.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVIEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            11561..11677
                     /locus_tag="WHG62_000464"
                     /pseudo
     CDS             11561..11677
                     /locus_tag="WHG62_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11729..12898)
                     /gene="odhB"
                     /locus_tag="WHG62_000465"
     CDS             complement(11729..12898)
                     /gene="odhB"
                     /locus_tag="WHG62_000465"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ1724626.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEATPAAAAPD
                     AAQNNAAMPAAAKLAAETGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAGARPE
                     ERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGVKLGF
                     MSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSI
                     ADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHA
                     TKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLDL"
     gene            complement(12998..15826)
                     /locus_tag="WHG62_000466"
     CDS             complement(12998..15826)
                     /locus_tag="WHG62_000466"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ1724627.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADDYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(16031..17314)
                     /gene="gltA"
                     /locus_tag="WHG62_000467"
     CDS             complement(16031..17314)
                     /gene="gltA"
                     /locus_tag="WHG62_000467"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ1724628.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(17426..17674)
                     /locus_tag="WHG62_000468"
     CDS             complement(17426..17674)
                     /locus_tag="WHG62_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ1724629.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(17678..18385)
                     /locus_tag="WHG62_000469"
     CDS             complement(17678..18385)
                     /locus_tag="WHG62_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ1724630.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(18506..20269)
                     /gene="sdhA"
                     /locus_tag="WHG62_000470"
     CDS             complement(18506..20269)
                     /gene="sdhA"
                     /locus_tag="WHG62_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ1724631.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(20272..20613)
                     /gene="sdhD"
                     /locus_tag="WHG62_000471"
     CDS             complement(20272..20613)
                     /gene="sdhD"
                     /locus_tag="WHG62_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ1724632.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATTVWLVG
                     CLVYSIKVIWG"
     gene            complement(20607..20984)
                     /gene="sdhC"
                     /locus_tag="WHG62_000472"
     CDS             complement(20607..20984)
                     /gene="sdhC"
                     /locus_tag="WHG62_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ1724633.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(21263..22666)
                     /locus_tag="WHG62_000473"
     CDS             complement(21263..22666)
                     /locus_tag="WHG62_000473"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ1724634.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPAGKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(22915..23652)
                     /locus_tag="WHG62_000474"
     CDS             complement(22915..23652)
                     /locus_tag="WHG62_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ1724635.1"
                     /translation="MALQDCTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(23929..26205)
                     /gene="metE"
                     /locus_tag="WHG62_000475"
     CDS             complement(23929..26205)
                     /gene="metE"
                     /locus_tag="WHG62_000475"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ1724636.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARSAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(26341..27219)
                     /gene="metF"
                     /locus_tag="WHG62_000476"
     CDS             complement(26341..27219)
                     /gene="metF"
                     /locus_tag="WHG62_000476"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ1724637.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            27419..27694
                     /locus_tag="WHG62_000477"
     CDS             27419..27694
                     /locus_tag="WHG62_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ1724638.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            27694..27819
                     /gene="ykgO"
                     /locus_tag="WHG62_000478"
     CDS             27694..27819
                     /gene="ykgO"
                     /locus_tag="WHG62_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ1724639.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
BASE COUNT         7050 a         7004 c         6666 g         7123 t
ORIGIN      
        1 atttctgata aatcaccgta acgttaaatt tccagattcc cattttcgtg aacataacgg
       61 tgtgaacatt agcaaaaatt caaaaaacca aacttcctca ttcgtgtgaa tgatggtact
      121 gatattttct attttagttc gcaaaattaa tctttcaaca catcttgcac agccgcttga
      181 atcttagccg ccgttgcttc aatttgccgt tgttcggcag atgggtttgc cgctgtttca
      241 accgaagccg cttgtgaagc tggctcagat tcaggctcgg attcgatttg cggcgcagtc
      301 agcggcagac gcgccaatac agtttttacg ccggttactt tatcgccaat cgccacttgc
      361 gcctgcgcgt caaccggcag atacatatcc acgcgcgaac cgaagcgaat aaagccatag
      421 cgttcgccgc gggacagttt cgcacctgct tgggtgtagc acaaaatacg gcgcgccacc
      481 aaaccggcca cttgaacaaa agtaatttca cgacctgaag ccgtagtcgc caacaccgca
      541 ttacgttcgt tttccgtgct ggctttgtcc aaatccgcat tcacgaattt gcctttgtta
      601 tagaccactt tcgttaccgt acaatcggca ggcgattttt gcgaatgcac gttgaacacg
      661 ttcataaaaa tactgatttt caaagcatcg acatcacgat acggatcgcg tgcgcgttcg
      721 accaccacaa tgcggccgtc aacagggctc aacaccgctt caggattttg cggaatctca
      781 cgcgcagggt cgcggaaaaa ctgcagggca aatacggtaa acacccaaaa cggcaaagac
      841 caccagccgc aacacatcga caccagcagg ctcaaagcca aaccgccgcc aataatcggc
      901 cagccctcac gggcgataat cgggtggggg taaagacggt tcatttgtca tccttttgtt
      961 caagcgggtt aaaattgccg acattatagc ggaatctgcc gtactccgcc gacaaatgcc
     1021 gtctgaacgc ggcttcagac ggcatccgag aaagtgctac aataccagtt ttcctttatt
     1081 tttcaggcgg catccattat gtgcaagcat catccccaac attcgcacga caacgacacc
     1141 atccgcatcc gcggcgcgcg cacgcataat ttgaaaaaca tcgatttgga cattccgcgc
     1201 cacaagctcg tggtggtaac aggattgtcg ggcagcggca agtcgtcgct ggcgtttgac
     1261 acgctgtatg ccgaagggca gcggcgttat gtcgagagcc tttccgccta tgcgcggcag
     1321 tttttgcaga tgatggacaa acccgatgtc gatttgatcg agggtctgtc gcccgcgatt
     1381 tccatcgagc agaaatccac cagccacaat ccgcgttcca ccgtcggcac ggttacggaa
     1441 atccacgatt acctgcgcct tttgtacgca cgcgtcggca cgccgtattg ccccgaacac
     1501 aatctgccgc tatccagcca aaccgtatct cagatggtcg atgccgtatt aaaactgccg
     1561 gaagacacgc gcgtgatgat tcttgcgccg gcagttcgtg agcgtaaggg cgagtttgtc
     1621 gacttctttg ctgacttgca ggcgcaaggc tttgcccgtg tgcgcgtgga cggcgaggtc
     1681 tatcagcttg acgaagtgcc gaagctggaa aaaaacatca aacacaatat cgacgtggtc
     1741 atcgaccgcg tgaaagtgaa ggcgaacatc aagcagcggc tggcggaaag ttttgaaacc
     1801 gcgctgcgcc acggcaacga gcgcgcgctg gcgatggaaa tggacagcgg cgaagagcat
     1861 tggttttccg cgcgtttcgc ctgccccgta tgttcgtaca gcctgcccga attggagccg
     1921 cgcctctttt cgttcaacaa cccgatgggc tcctgcccga cttgcgacgg cttgggcaac
     1981 accaatttct tcgaccccga aaaagtagtc gcccatcccg aattgtcgct ggcaacgggc
     2041 gcgattgacg gctgggacaa gcgcaaccag ttctatttcc aaatgattca gtcgctggcg
     2101 cggcattacg gttttgatgt gcaggctgct tgggaaacgc tacctgaaaa agtgaaaaaa
     2161 gtcgtgctgc acggctcagg caaggaagtc attgatttca cctacctatc cgaacgcggc
     2221 accaccttca accgcagcca cgccttcgaa ggcatcattc ccaatctcga acgccgctac
     2281 cgcgaaaccg acagcgaaac cgtgcgcgaa aaattgcgcg aataccaaaa ccaccgcgcc
     2341 tgcccgagct gcggcggtgc acgtttgcgc aaagaagcgc gctacgttta cgtcagcggc
     2401 gaacctttac acgaagtctc cgcctggccg ctgaccaaaa cccaccgatt ctttgaaacg
     2461 ctggatttgg acggcaacaa aaaacaaatc gccgaaaaaa tcctcaaaga aatcaccgag
     2521 cggctcggct ttttgattaa cgtcgggctg gattacctga atctctcccg ctccgccgaa
     2581 accctttccg gcggcgaagc ccagcgcatc cgccttgcca gccaaatcgg cagcggcctg
     2641 accggcgtga tgtacgtttt ggacgaaccc tccatcggcc tgcaccagcg cgacaacgac
     2701 cgcctgcttg ccaccctcaa acgcctgcgc gatttgggca acagcgtgat tgtggtcgaa
     2761 cacgacgaag acgccatccg cgaagccgat ttcgtcgtcg atatgggccc cggcgcaggc
     2821 gaacacggcg gcaacgtact gattgccgac acgcccgaaa acgtcgccaa atgcgaaaac
     2881 tccgttaccg gacaatacct cagcggcaaa aaatccattg ccgtgccgtc tgaacgcacg
     2941 cccgtcaatc ccggccgaat gctcgtcctc aaaggcgcgc gcggcaacaa cctcaaaaac
     3001 gttaccctcg aactgccgct cggtttgatt acctgcatca ccggcgtatc cggcagcggc
     3061 aaatccaccc tgattaacga caccctcgcc aaaatcaccg cccgcgaact caaccgagcc
     3121 caagaagaac ccgccccata cgacgacatc cgcggcctcg aacacctcga caaagtcatc
     3181 aacgtcgacc aatcccccat cggccgcacc ccgcgctcca accccgccac ctacaccggc
     3241 ctgttcaccc ccatccgcga actcttcgcc ggcgtacccc tctcgcgcga acgcggctac
     3301 aacgtcggca gattctcctt caacgtcaaa ggcggccgct gcgaagcctg ccaaggcgac
     3361 ggcgtgatta aagtcgaaat gcacttcctg cccgacgtgt acgtcccctg cgaagtctgc
     3421 cacggcaaac gctacaaccg cgaaacgctc gaaatccaat acaaaggcaa aaacatcagc
     3481 caagtcctcg acatgaccgt cgaagaagcc cgcgaatttt tcgacgccgt ccccaccgta
     3541 tcgcgcaaac tgcaaaccct gatggacgta ggcctcggct acatccgcct cggccagtcc
     3601 gccaccaccc tctccggcgg cgaagcccag cgcgtcaaac tcgccctcga actctccaaa
     3661 cgcgacaccg gcagaacgct ctatatcctc gacgaaccca ccactggcct gcacttcgcc
     3721 gacatcgccc tgctgctgga agtcataggc cgtctgaaag gcaaaggcaa ctcgattgtg
     3781 attattgagc ataatctgga tgtgattaaa actgcggatt ggattgtaga tttaggaccg
     3841 gaaggtggcg atagcggggg gaggattatt gcccaaggta gccctgagga agtggcgaag
     3901 gttaagggga gttatactgg gaagtatttg aaggtggttt taggataatt ttcagattac
     3961 tgaaaaatga tatttcatag aggttaaaaa tgattgaatg gcgttttgat caaggtagat
     4021 tagattattt tagatttgat gaaattaaaa aaattgcaaa aggattatat ggaattaatc
     4081 aatgtccaaa gccacgtgca aaagatattg atattgtaag attaagcctg actcaagaga
     4141 caaacttacc ttttgcccct aacagttcac aatatccagt ttggcgtaat tatggtcgtg
     4201 tttttaaatg tttgttactc gcaacggagc ataatgggtt aatctgtact acagatttat
     4261 gtgccgattt agttcagaat gatgaaatta gttgcgatga ttatttacta cattttgcaa
     4321 cacatttttc ctacccatca ccagcttttt caggatatca accatctgaa aatcgggttt
     4381 tccctgtttt ggcaattatt agagctttaa tttcaaaata taaggaaaca ggagttaatt
     4441 ttttggacat ggatgaaatt atttacaaaa tcgctagtaa taatagtatt acaggtattg
     4501 cttctttttc attctcacag ttaattatga ataaagaagc aattaaatat gatcctcgtc
     4561 aaattagaga gttggtaaag tttattagtc aattctcttt tttgtcttgg tatgaaaata
     4621 agttgttttt agatattaca gattttagtg aactacattt attagaaaac caatttattg
     4681 cagatacaca accacaagaa agattagata gtttagagat aatgagattg ggtaagacaa
     4741 ataataattt cttattgatg aatgaaatcg tttcattatc tattgatgat caggcgttta
     4801 gtgagggtgg taaaattaaa gtcacccatt taattacaga acgtaatagt attttaagaa
     4861 aaatctattt tagcaagacc caaaatgcac aaatatgtcg catgtgtgga ttagatacgc
     4921 aaaggagcta tgaatggagc gaacatatca ttgaagtaca ccatctatta ccactatctt
     4981 ctcctgtaag ggtagaagat aaaactactt cattaaaaga tttggttggt atctgtccaa
     5041 cctgtcatcg tgccacacac aagtactata ctttttggct taatttgcac aagaaaaaag
     5101 attttgttag ttatgaagaa gcatatcatg tatatgaaga agctaaaagt aaagttaaaa
     5161 gaatttataa atagatagga gtatctatgt taataccgca aacctcttta tttgaccaag
     5221 aaaataatag aattatttca caaagaaaat tattagaaca aagtttatta caaggtattc
     5281 cattgaatga actaatacgc cagaatcaaa tgagctatga tgatttaatt tatattcatc
     5341 atgataaaaa gccttttgaa aagagaaaga atttggttct aagtgatttt caaaaaaagg
     5401 aaaatcacat tccgataatt agtttttttt caggagccgg tggattagac ttagggtttg
     5461 aagcagcagg ctttcaacat tctatgctga ttgaaaaaat acctttattt tgtgatacat
     5521 tgcgtcttaa tcgccctaat tggtctgtgt ttaatgctga tgtttctgaa acagaagaaa
     5581 tggttgaact aatcagaaat aatattgggt ctttaagttt tgatggtgta tttattggag
     5641 gtcctccctg tcagcctttc tccatagcct caaaccagag attctcaaaa actgataaaa
     5701 attttaaacg tgtcggcttt gagcataagc aaaatggtaa tctattattt aattacgttg
     5761 aattgattaa gatttttcgt cctaaagtat ttcttattga aaatgtctct ggattgatgg
     5821 atatagataa tggtaaacag ttagctagtg tatattgtga tttacagcag caaggctact
     5881 cactctataa acctcaaata attaattctg aatattttca tgtacctcaa cagagaatta
     5941 ggctatttat aattggttat ttaggagata aaaaatttag tccgctacaa ccaaccaata
     6001 ccccattggc atgtggtaat acatttgaaa ttccaattat taaccaacat aaccatatta
     6061 caagagaaca ttcggctgaa tcgattttac gctatatgga attagcttat gggcaacgtg
     6121 ataaaaaggg acgtgtagat aggttagatc caagcaaacc atctaaaact attattgctg
     6181 gtggcactaa aggtggagga aggtctcact tacatccata tatcccaaga acgttatctg
     6241 ttcgtgaaag tgcacgatta caaacgtttc ctgatgatta tatttttaca ggagcggttg
     6301 cgcggcaatt cacgcaggtt ggtaatgccg ttcctcccat ccttgctgct caattagcaa
     6361 cagcaattaa gcattcttat tttgaatagc aagcaagcta tagcaagttg tagcctttat
     6421 acccaaccca ccgtatgcgt ggttgcgcca cacctacctg tgagtctacg aaacttcaaa
     6481 gccaacgtgc agtgtgtgtg cggtacgtac gcggttggtt gattaacggt ttgccgttcc
     6541 aacttttaac ttcgttgaag ccagcgcttt cagacggcct ccaatgtcgt ctgaaaacat
     6601 cagctccaac aaagttaaaa ccttaaacaa caaaccattc cttctccaac acccaaacca
     6661 caaacaaaaa tcctatggcg cgttatcgca gaaacttcat tgccggcggc acattctttt
     6721 tcaccgtcaa actcgccgac ccgaaatcgc gcctgcttgt cgaacatatc ggcttcgcgt
     6781 acggcttata tggatgtgca aaaacaatat ccctttgaaa ccgtcgccgt atgcgtgcta
     6841 ccgaaccata tccacgccat ttggacgctg ccgcccgacg atgcggatta ttccctactc
     6901 cggcggctga ttaaaaccaa attctccgca tattcccctt atactaaaaa cttatccgcc
     6961 ggcaaacagc ggcggaacga acgcggtatt tggcaacggc gtttttacga acacaccgtg
     7021 cgcgatgaaa cggatttgca gtgttacgcg gactatatcc attctaatcc tatcaaacaa
     7081 agaatgtcgc gtgctaaaac agaatcctgc aaaaataata tcagtctttt caaatgcgat
     7141 acttatcatt ccctgacttc aaaaaaatat gtgcaacctg acttacgggt ttgctcctgt
     7201 ttgaccgata aatattctga ctgcctcaaa gggcaaaaaa taatgtgggt atgttgaggc
     7261 tgcctctttt tgaaatgaca aacaaaatgc cgtctgaaac ccgatttccg gtttcagacg
     7321 gcatttgatg tttaatcagt tgtcaaacct gattatgcca aaccttttgc cttcaacact
     7381 tccagcatcg tcgtgcccaa ctcggcaggg ctgcgggtgt aagcgatacc ggctttttcg
     7441 aaagcggcga atttttcctc ggcagtacct ttgccgccgg aaataatcgc accggcgtgg
     7501 cccatacgtt tgcctttagg agcggtaaca ccagcaatgt aacctacaac aggtttggtt
     7561 acgttggatt ggatgtattc ggctgcttct tcttccgcag taccgccgat ttcaccaatc
     7621 atgatgatgg cgtcggtatc tgggtcttct tggaagagtt tcagtgcgtc gatttggttc
     7681 ataccaggaa tcgggtcgcc gccgataccg atacaggttg attgacccaa gcccagtttg
     7741 gtggtttgtg ccacggcttc gtaagtcaat gtaccggaac gggaaataat accgatgcgg
     7801 cccggagtgt ggatgtggcc cggcataata ccgattttgc actcacccgg agtaatcacg
     7861 cccgggcagt tagggccaac caagcgagta ccgttgccgt tggtttccaa gtaacgtttg
     7921 gctttaagca tgtccagagt tggcacgcct tcggtaatca caacaaccaa gcctacgcct
     7981 gaatcaacgg cttcaacgat agaatccaaa acaaacggag cgggaacgta aattacagat
     8041 gcatccgcgc cggtttcttt aaccgcttct ttcatggtgt tgaatacagg caggttcagg
     8101 tgggtttgac cgcctttgcc cggggtaacg ccgccgacaa ctttagtgcc gtaagccaga
     8161 gcttgttcgg agtggaaagt accgttttta ccggtgaaac cttgaaccaa tactttggtg
     8221 tctttattaa tcaatacgct cattcttttc tccttaggcg tttacggctg caacaatttt
     8281 ttcggctgcg tcattcaggc cgtctgcaga agtcagtttc aggcctgatt cgttcaggat
     8341 tttcgcgccg agtacggcgt tgttgccttc tagacggaca acgacaggaa cgtcgacgtt
     8401 gatttcttta acggctgcca cgatagcttc cgcaatcatg tcgcaacgta cgataccgcc
     8461 gaagatgttg atcaatacgc cttgaacgga tttgtcttcc agaatcagtt tgaacgcttc
     8521 aaccacgcgg tctttggttg cgccgccgcc aacgtccaag aagttggcag gttggccgcc
     8581 tttcagtttg atgatgtcca tggtggccat cgccaaaccg gcaccattaa ccatacagcc
     8641 gatattacct tccagggcaa catagttcag gtcgaattcg gaagctttca gctcgcgttc
     8701 gttttcttga gatttgtcgc gcaattcggc gattttcggc aggcggtaga gcgcgttgct
     8761 gtcgatgccg attttgccgt ccacgcaagc cagtgcgccg ttttcgcgaa ctgccagcgg
     8821 gttgacttca aacagggcga agtcgttttc gacaaacgct ttgtacgcgc cggtcatcag
     8881 tttgacgaac tcgttgattt gtttgtcttt caagcccagt tggaaggcaa cttcgcgagc
     8941 ttggcaaggt tgcaggccga ccagcggatc aacggttact ttgaagattt tttctggagt
     9001 ttcggcagca actttttcga tttccacacc gccttcggta gaagccatga atgtaacgcg
     9061 gcgggtagaa cggtcaacca ctgcgcccaa gtacagctcg gtttgaaccg gatacatatc
     9121 ttcgcaaacc aaaacgctgt tgacaggttg accgttggca tcggtttggt aagttaccaa
     9181 gttggtgcca atcaggcttt cagccacttc tttagcttct tcgcggcttt taacgacttt
     9241 tacgccgccc gctttaccgc ggccgccggc gtgtacttgt gctttgacga cggcaaactt
     9301 accgcccagt ttgtcgtaag ctgcagcggc ttcttcgccg ttgtgcgcca aaataccgcc
     9361 ttgtacgggc aaaccgtagc tagccagcag ttctttagcc tgatactcgt gtaaattcat
     9421 ggatttctcc tttagattag tggaatgccc cgagtttgcc tcaaaatggc aagcccgtgc
     9481 gtttcagact acctttcggc ggtcggaaaa tcgtcgtttc acttgctgaa aggcaaccac
     9541 atccgcgcca gcagatacat ggctgcaccg cctcccccga gaataaaaaa gacgatgcct
     9601 tttttacgcg aattcggaca gagcagataa acggcaaggc tgaaactgat aaacaacaat
     9661 gccacgcgcc aaaccaattc tttatctttg aaacggttga gcgtataagt ttcggtcatc
     9721 atcacataca tctgccacaa tgcggccata cacatgctga tgatgcccat cggtataaag
     9781 aaaataccga ctatttcttt gttcataacg aatgtaaatg ctgtttgttt gtctgacgga
     9841 attataaatc agaaaacgga gctctcggaa cattcaattt gtcgaaggca ttaaggtcgt
     9901 ctgaaaaatt tcagacgact ttaatgtcta tcaaccgtgc aaagcgcgtt tgtcggccgc
     9961 caatgcagct tcgtgaacca cttcggacaa ggttgggtgg gcatggataa tgcgggcgat
    10021 gtcttcgctg ctggcgaaga attcgagcgc agtcacgcct tcgataacca attcgctgac
    10081 aaccggacca atcatgtgta cgcccaagat acggtcggtt ttggcatctg ccaacacttt
    10141 aaccgtacct ttggctttgc ccattgccaa tgcgcgaccg tttgcaccga aacctgaagt
    10201 accttttttg tactccacgc cttcggcttt gagctgctct tcggttttac ccacccaagc
    10261 gatttcagga tcggtgtaaa tcacgaatgg tacgttgttg aagtcgatat gcggtttttg
    10321 accggcaatg cgctctgcaa cggcaacgcc ttcgtcactg gctttgtgtg ccaacatcgg
    10381 gccgcgaacc acgtcgccga ttgcccatac attaggcagg ttggtacggc attcgccatc
    10441 tactttgata aagccgcgct catctttttc caagccgacg gcttcagcgt tcaggccttt
    10501 ggtgtttgga atacggccga tggcaacgat cagtttgtcg aatacttcgg ttttggcttc
    10561 gccggcagca gtttcgtaag caacggaaac gcctttgcct tcagatttga tgtcgccgat
    10621 tttcacgccc aattcgatgc tcaaaccttg ctctttggtg aagtatttga aggcttcttt
    10681 agcgatttgt tggtctgcgg cagccaggaa ggtcggcgcg gcttcaagaa tggtaacttc
    10741 tgcacccacg cggttccata cggaacccat ttccaaaccg atcacgccgg aaccgatcac
    10801 gccgagtttg gcaggtactt cggtcaggtt caatgcgcct tcgttgtcca atacgttcac
    10861 attgtcgata gcgacttgtg gcagcggacg cggtacggaa ccggtcgcta cgatgacgtg
    10921 tttggcttcg ataacggttt tctctccttt gttatcgact tcgatttggt aagcatcgcc
    10981 atttttaccg gcaaaggaag ccgtaccgaa cagactggtt actttatttt tttggaacag
    11041 gaatttcacg ccgccggtca gtttggtcac gatggcatct ttgcgctcaa tcattttggc
    11101 cgcgtcgaat tttacgtcac cgacagtgat accgtgttcg gcaaaatcgt gttgcgcagc
    11161 gtggaaatgt tcgctggatt gcaacagggc tttagaaggg atacagccta cgttcaagca
    11221 agtaccgccc aatgcagggg cattgcctgc tttgttaacg cctgcatcga cacaggcagt
    11281 tttgaaaccc agttgtgcgg cacggatggc ggcaacgtat ccgcccgggc ctgcaccaat
    11341 cactactaca tcatattgag acatcgtgtc atcctttgct tttagcagta tctcaaaata
    11401 aaaacgatac ttttcgtttc ttttttattt tgaatgactg cgttttgatg gttttaagaa
    11461 aaggccgtct gaaagtccat atctgccgat tcattcgaat caaatgtttt agacggcctc
    11521 aatcgttcgt tgagcctatt gtagcacgat actacattac gctacatcta aatatagtgg
    11581 attaaattta aatcaggaca aggcgacgaa gccgcagaca gtacagatag tacggcaagg
    11641 cgaggcaacg ccgtactggt ttaaatttaa tccactataa aaattcagac ggccttttca
    11701 ttaacaaata aaaggccgtc tgaaacgatt acagatccaa caacaggcgg gctgggtctt
    11761 ccaacgcgtc tttaatggct accaaagtca atacagcttc gcggccgtca atgatacggt
    11821 ggtcgtaaga cagagccaga tacatcattg gacggacaac aacttggccg ttttcaacca
    11881 cagcgcgctc tttagtggcg tgcataccca aaatcgcaga ttgaggcgga ttgatgatcg
    11941 gggtggacat catagaaccg aaagtaccgc cgttggtaat actgaatgta ccgccggtca
    12001 gatcttcgat agcgattttg ccgtctttgg cttttttcgc gtaatcaaca attgcttgtt
    12061 cgatgtcggc aatgctcatt tggtcggcat cgcgcaggat tggcacaacc aaaccgcgtg
    12121 ggctgccaat cgcgataccg atgtcgaagt agccgtggta cacgatgtct ttgccgtcaa
    12181 cagaagcatt cacaaccggg tattttttca gggcggcaac agcggcttta acgaagaaag
    12241 acataaagcc caatttcacg ccgtgttctt tctcgaattt ttctttgtac ttcgcacgca
    12301 agtccatgat cggtttcatg ttgacttcgt tgaatgtagt cagaatggcg ttttcttgtt
    12361 gagaagccaa gaggcgttct gcaacacggg cacgcaggcg gctcattggt acgcgttctt
    12421 caggacgtgc gccggcaggg gctgcggctg cggcaggttt ggcagcggca ttttgtacgt
    12481 cttctttcaa tacgcgaccg tcacggccgg aaccttgcaa tgcgttcacg tcaacaccgg
    12541 tctcggcagc cagtttggcg gcagcaggca tagcggcgtt gttttgtgca gcatcaggag
    12601 cggcggcggc tggggtagct tcggcaggcg cggcggctgg ggcttcagca gcggcagtag
    12661 cagcggtatc gatgcgtgcc aaaacttggt cggcaacaac ggtttcaccg tcttgcgcta
    12721 cgatttcaac caatacgccg gcttgtggag aaggtacttc caaaaccact ttgtccgttt
    12781 cgatatcgat caggatttcg tcacgggcaa ctgcttcgcc aacttttttc ttccattcca
    12841 agagcgtgcc ttcagatacg ctttcagaca gcataggtac ttttacatca ataatcattt
    12901 tgtgtctcca atggcccttt cagacggcct gttgtgtgtt tttcattctg catatgggca
    12961 ttccgcctga gcagcctcag acggaatgct gcttggttta caacgccaaa gcgtcttcaa
    13021 ccaattgttt caattgagca atgtgtttgc ttgagtagcc cactgcaggc gatgcgctgc
    13081 ttggacgacc agcataagac agtttttgct cttcgctgat aacgtcttcg atgcggtggc
    13141 ggatttggta gaacgcgcct tggtttttcg gctcttcttg cgcccaaacc acagattttg
    13201 cgttcggata tttcgccagt tcggctttaa cctcatcgta tgggaacgga tacagctgct
    13261 caacgcggac aatcgcaaca tcatcttcca gtttacgttc ggctcgaccg gcttccaagt
    13321 catagtaaac ctgaccggca cacaatacca cgcgtttcac gctgtcgttg cttgcgcgtt
    13381 cggcggtatc gccgataacc ggacggaaag tcgaaccttc ggtgaagttt tccagcgggc
    13441 tcattgcccc tttgaatcgc aacaggcgtt tggacatgaa aatcactagc ggtttgcggt
    13501 atgaacctaa gacttgacgt tgcaagaggt ggaacatttg cgacgcttca gacggcatga
    13561 tgacttgcat attgttctca gaacacagtt gcaaccaacg ttctacgcgt gcagaagagt
    13621 gctcgggacc ttgaccgtcg tagccgtgcg gaaggatggt ggtcagacca cacaaacgac
    13681 cccatttggt ttcgcctgaa gacaggaatt ggtcaatagt cacttgcgcg ccgttggcga
    13741 agtcaccgaa ttgagcttcc caaatggtca gcttgtcagg tgcggagcag gcaaagccgt
    13801 actcaaacgc catcacggct tcttcattca aaatggagtc gataaccagg aactcgccca
    13861 taccttcgcc catatggcgc agaggaacat aagtaccgtc gtcccatttt tcgcgttttt
    13921 gatcgtgcaa tactgcatga cggtgtgaga atgtaccgcg cccggagtcc tcgccggaga
    13981 tacgcacgcc gtggcctttg gttacgaggc tggcgtatgc gagggtttcc gccatacccc
    14041 agtcgatggc ttgtttgccg gatgccatgg ctttacgcgc ttcaatcaca cgttttgcag
    14101 tcggatgcag ggcaaagcct tccggtacgg cggtaaactt ctcggtaaga cgctcaatat
    14161 ccgcggcagg caaaccggtt tcgatgtgtt cgcgccaatc tttgccttgg tatttgctcc
    14221 agtcgatttg tgtgcgttgg aagttgctca acgttgtttg ctcgacatgt tcgcctttat
    14281 ccaaagcatc acggtaggct tggatgtaat cgtcagcctc ggcttgggtt accacgcctt
    14341 cggcaatcag ttgctcggtg tacaaagcac gcgcacccgg gtgttgcgat acttttttgt
    14401 acatcatcgg ttgggtcaag gtaggatcgt cgccctcgtt gtggccccat ttacggtagc
    14461 agacaacgtc aatcacgatg tctttatgga attttttgcg gtaatccaaa gcagcttgga
    14521 tggcaaagca aacgcgttcg ggatcatcgc cgttcacatg gataaccgga gcggaaacca
    14581 ttttcgcgat atcggtacag tgtacggtcg aacgggtatc tcggatatcg gaagtggtaa
    14641 agccgatttg gttgttaatt acgatgtgaa ccgtaccgcc ggtggtataa ccgcgcgttt
    14701 tagacaggtt gaatgtcgct tggttgacac ccaaaccgat aaatgcggag tcgccgtgaa
    14761 tcaatacggg caagacttta tcgcggccgt tttcgcccaa acgtttttgc ttggcgcgtg
    14821 cagaaccttc cactaccgga ttgacgattt ccaagtgtga cgggttgaac gccaaagaaa
    14881 cgtgcatcgg accatgtgga gtggcgatgt cggagctgaa gcccatgtgg tatttcacgt
    14941 cgccgctagg caatttgatt tcggcacggc cttcaaactc agcgaacaaa tctccgggtt
    15001 ttttacccaa aatgttcacc aaaacattca gacggccacg gtgcgccata ccgatgatga
    15061 cttcttccac gccgtcttta ccggcgtttt gaatcaggta gttcaaaccg gcaatcgcgc
    15121 tttcgccgcc ttcgacaccg aaacgtttct gaccgacata tttggtatgc agataacgtt
    15181 ccaaagtctc ggcagcagtc atctctttca agatacggcg tttttgatcg gcattgtaat
    15241 gcggtgtgga caatacgctt tcaaaataat tgcgtaccca gcggcgctct tcggtattgg
    15301 gaatatagat atattccaat gcgatgtggc cgcagtaggt ttgtttgagg ttgctgatga
    15361 tttgggacaa aggcagtttg ccgcgattgg caaaatcgcc ctcgcccata ttgaattgaa
    15421 gcgccatatc ggcatcagac agaccgtgga atttcggatc gagggcttca atatcgcgcg
    15481 gggggatacg tttgagcgga tcaagttggg ctgcacccac gccttggata cgataggcag
    15541 aaatcagccg taaaacgctg acttgctttt tcagcattgc ctcatccgca ccgcccgcaa
    15601 cggcagatgc aattttcttt ttcgccaaag taacaaatga ttcgcgaatc ggtgtgtgtg
    15661 cgacatcgac agcaaccgtc cccggctgtt tgctcaaatc ggtgaaatac tgcttccatt
    15721 tttcatcaac cgcatcgggg ttttccaaaa aagcctcgta caattcctca atgtagggtg
    15781 cgttcgaacc gaacaggtaa gagaaattga gtttttcgtc catcatggcg tgcgctcttt
    15841 tctttaaaat ataaacaaag ggtagaagtc cgcgtcctga cggctaaact gatgccgtct
    15901 gaaaagacat tttattctac cctattttaa accggattgc ttgtcttgat ttcatccgac
    15961 tacaatcaga cggattcggg aaacaatccg gttctctgat attgcctgtt tgacaatata
    16021 ttaatgtatg ttacctctcg cctggcggca cataatcgcg gcgttccgaa ccggtataaa
    16081 gctggcgcgg gcggccgatt ttcagcgaag gatcgctaat catctcgtgc cagtgcgaaa
    16141 tccagcccac gctgcgcgac agggcgaaga tgacggtaaa catttcggtc gggatgccca
    16201 gcgcggacag gacgatgccg gaatagaaat cgacgtttgg atacagtttg cgttcgataa
    16261 agaacgggtc tttcagcgca atctgttcca attccatcgc cagtttgaat ttcggactgt
    16321 cttccaagcc caattccttc aaaacttcat agcaggtttc gcgcataatg ctggcacgcg
    16381 gatccatatt gcggtacacg cggtgaccga agcccatcag acggtatttg cgttgtttca
    16441 caccttccat gtatgcggca acattagaca catcgccgat ttcgtccaac attttcaaca
    16501 cggcttcgtt cgcaccgccg tgcgaagcac cccacaggca ggcgataccg gcagcaatac
    16561 aggcaaacgg attcgcaccc gaagagcctg ccagacggac ggttgaagtt gaggcgtttt
    16621 gctcgtggtc ggcatgcaaa ataaagatgc ggtcgagcgc gcgtgccaaa acgggattgg
    16681 gtttgtagtc ttcacacggc gtggcgaaca tcatatgaag gaagttttcg gaataagaaa
    16741 gattattctt cggataattg aacggcagac cgtttgaata gcggtagcac attgccgcaa
    16801 tggtcgggat tttggaaatc aggcggtaaa tcgcgatttt gcggtgttcg ggattgctaa
    16861 tgtccaagct gtcttggtag aacgcagaca gcgcgccgac cacgccgacc atcatcgcca
    16921 tcggatgcgc gtcgcggcgg aacccccgga agaaccaagt cagctgttca tgcaccatcg
    16981 tgtggcggcg gacggtattg tcaaattctg ccttttgctc gggagtcggc agttcgccgt
    17041 aaatcaacag gtagcagact tccaaataat cggacttttc ggccagctgc tcgatggggt
    17101 atccgcgata ataaagcaag ccttgatcgc cgtcgatgta agtaatttta gactcacagc
    17161 ttgcggttga aacaaatccg gggtcgaagg aaaacaaacc tgtatttttt gtcagccccc
    17221 gaatgtcaac cacatcgtgc ccgatgctgg cttccaatac cggcagctcc aaacctgcct
    17281 gacccggtac gttgagttta attgatttgg acatattatt gctcctttgc aagttataac
    17341 ccacgttact gcatccgcag cacgttcttt gccctcagac ggcttttgca ttttgaaatc
    17401 tgcctgcagg cagatttcag atgcctcatg cccgtctgat tttttcaagc atcgggataa
    17461 ggtgcccttt gtccgtttcc gaatgcccgt taatcaaggc aagcaattct tgatcttgaa
    17521 attcaaggat ttcggaaaac tcggacagct ctttatcgct caaatgctcg aattcttttt
    17581 ccataaacct gccgaagatt aaatctaatt ccaacaatcc ccggcgggtt tgaaaacgga
    17641 ttttccgttt ggcaatatcg tcaaaaacca tcatttctta aacggcccgt ttcaacataa
    17701 tctctttaat cttaccgatg gctcgggtcg gattcaagtg tttaggacat acgtctacgc
    17761 agttcataat ggtgtggcaa cggaacaaac ggtatgggtc gttcagatta tccaaacgct
    17821 cattagtgat ggtatcacgg ctgtccgcaa tgaaacggta agcattcagc aaaccggacg
    17881 gaccaacgaa tttatcaggg ttccaccaaa atgacgggca ggcagtcgaa cagcaggcgc
    17941 acaaaataca ctcgtacaaa ccgtccaact ctttacgctc ttcctgagtt tgcagacgct
    18001 ctttgtccgc atcaatcgga ttatcgttga caacataagg tttgacggaa tggtattgtt
    18061 tgaagaactg ggtcatatcc acaatcaggt cgcggataac aggcagacct ggcagaggac
    18121 ggattttaac tggctgtttc aagccacgca gatcggtcaa acacgccaag ccgtttttgc
    18181 cgttgatgtt cataccgtcc gatccgcaaa tgccttcgcg gcaggagcgg cggaaagaca
    18241 aggtatcgtc ttgtgctttc aggcgtacca aagcatccaa aagtttcacg tcggtcggtt
    18301 ccaattccaa ctcgtaacgc tgcatataag gcttggcatc aacatccggg ttgtaacggt
    18361 aaatttcaaa actcattttt tccatgagaa gtgttccttt tctcatcaac tgcccaatga
    18421 ttttgtatta taaattcaag cagttcaatg tgggtatggt tagatttcag acgagcttat
    18481 gaggcgaaga ccgtctgaaa acgcatcaat aaacgcgctt ggccggtttg atgtattcca
    18541 cgctcaaagg cttggtatgt accggtttgt aagacaaagt attggtatct gaatggtaca
    18601 gcgtatgttt catccagttt tcatcatcgc gctcaggatg gtcgtctgaa gcgtgcgcac
    18661 cgcgtgattc tttacgtgct tcggcagaca ccaaagtcgc tttcgccact tcaattaggt
    18721 tatccaattc caaagcctcg atacgcgcgg tattccacac tttgctcttg tctttgattt
    18781 cggtacgttt cacacgctcg gcaatcgcca tgacttctcg aacgcctttg ctcagaatct
    18841 catcagtacg gaacacgccg gcgtgcagtt gtacggagcg ttgcaattcg cgacgcaatg
    18901 catcaacgtt ttcgccatca gtttgattgt ccaaacgctc gatacgttgg cgggtcagct
    18961 cgcccgcatc cgcaggcaaa ggtttccagt cgctttgctc tttgatgaat ttaatcatgc
    19021 tgtcgccggc agctttaccg aacaccacca agtccagcag agagttcgta cccaaacggt
    19081 tcgcaccgtg tacggaagca caggcgcact cacctgcggc atacaggcct tttacaggca
    19141 cttcgtattc gtctccttgc ggcacaacga cttcgccgtg gtaattggtc ggaatgccgc
    19201 ccatcatata gtgggtagtc ggcacaacgg gaatcgggtc tttaatcgga tcgataccgg
    19261 cgaactgaat ggaaatctcg cggatgcccg gcagtttttc cataattttt tctgcgccga
    19321 tatggtcgat tttcagtaag acatggtctt tgtttttacc gcagccgcga ccttcgtaga
    19381 tttccatcgc catcgcgcgg gaaacaacgt cgcgagaagc caagtctttt acggtcggcg
    19441 catagcgttc cataaagcgt tcgccatcgg cattcagcag aataccgccc tcaccgcgta
    19501 cgccttcggt aatcaacacg cccgcacctg ccacgccggt cgggtggaat tgccagaatt
    19561 ccatgtcttc caacgggata cctgcacgcg cacaaatacc caaaccatcg ccggtattca
    19621 tataggcatt ggtagaagac gcataaatac ggccgccgcc gccggtagca aacatcacag
    19681 ctttagcgtg gaaaatataa acttcgccgg tttccatttc catggcggtt acgccgacga
    19741 catcgccgtt ttcatcacga atcaaatctt gtgccgtcca ttccacaaag aattgcgtat
    19801 tggcacggac gttttgttgg tacaaagtat gtagcatcgc atgacctgta cggtcggcaa
    19861 ccgcacaggc gcgttctacc gcgcgtttac cgtgttcggc agtatggccg ccgaaaggac
    19921 gctgataaat tttaccgctt tccacacggt caaaaggcat acccatgtgt tccaactcaa
    19981 ttacggcttc aggcgcggcg cggcacataa actcaatcgc atcttggtcg cccaaccagt
    20041 cggaaccttt cacggtatcg tacatgtgcc agtcccaacg gtcttcctgc acattaccca
    20101 gagaggcgga aataccgccc tgcgccgcta cggtatgcga acgggtcggg aacactttag
    20161 acaaaacggc acaattcaga ccggatttgg ataattggag ggctgcgcgt aaacctgcac
    20221 caccaccgcc gacaatcacg gcatcaaact tgcgaacagg aaaacccata cttaccccca
    20281 aattacttta attgaataca ccaagcagcc gaccagccag acggtggtgg caacctgcaa
    20341 aaacaaacgc acgccgaagg gtttgatata gtccatccac aaatcgcgga tacccaccca
    20401 agcgtgcaag aatacggcga tgaagctcac ttgggtaaat acttttaccc aagtttgact
    20461 aaaaaatgcc tgccatgccg aatattcttt aggcagggaa aatagaacca ctaaaagtgc
    20521 aacggtataa atcaacataa taaccgcagt cgcacgttgc atcgcccaat cgcgcaaacc
    20581 gtaatgggca ccggtcaatt tacgttctac cataacaacg ctcccaaaac gacagtcaaa
    20641 accaatgcag aagcaaatac ggctttagcg gtattgcgcg cagtattcag ctcaaggcct
    20701 ttgtgcgcat ccaaaaataa aaagcggata ccggcgagag aatggtgcag ataagcccac
    20761 aatacaccga ttaaaaccag cttgaccaaa ggatgggaaa caatggcacg gtaagtttca
    20821 aatgcagact cttgactcag ggtaccggac aggaaataca gcaggaaagg cagcataata
    20881 aacagcccga ccccgctgat gcggtgaagg atggaaacta tcccgggtat cggcagacgg
    20941 atgttcggca aatccagata aacaggacgc ggtttggcag acatagtcaa ttcctctgta
    21001 gttatatatc gactcaaaaa ccgtaaaccc attgctacac tgggttacat aaacgttaat
    21061 ttacctgttt tatcccattt tgaacagtgt attttaaaaa caaactgata gattttgaca
    21121 aacacgcgtg gaaacagcag attaaaagaa agatttttag ttttgccgcc cccttcccga
    21181 cacggtatca gcatccgacc ccatccccaa aaacaaaatg ccgtctgaaa aaatttcaga
    21241 cggcattgtt ttgccatatc ggtcaggctt tcaatttcgc atcggcatcg cgcaacgcgg
    21301 tacgcagacc ttcctcgata acgggatggt agaacggcat atccagcatt tgcggaacgg
    21361 tcatcttcat ttgatgcgcc catgccaaca agtgcgccaa atgttcggcg gcagggccta
    21421 cgatttccgc gccgataaag cggccggtgg ctttttcggc atacaggcgc atatggcctt
    21481 tgttcaccag catcacgcgg ctgcggcctt ggtttttgaa cgatacttcg ccgatgacaa
    21541 attcgtcggc ttggtattgc gcggcaacct gcgcgtattt cagaccgaca aagccgattt
    21601 gcggactggt aaacaccacg ccgatggtgc tgcgccgcaa accgccgccg atattcgggt
    21661 aacggcctgc attgtcgccg gcaatcttgc cttggtcggc agcttcgtgc agcaggggca
    21721 gttggttgga cgcatcgcct gcgatgaaga tatgcggaat actggtctgc atggtcagcg
    21781 ggtcggcaac aggtacgccg cgcgcatctt tttcgatatt gatattttcc aaaccgatat
    21841 tgtcaacgtt cggacggcgg cccacggctg ccagcatata ttcggcaaca aatacgcctt
    21901 tttcgccatc ctgctcccaa tggacttcta cattgccgtc tgcatcgagt ttgacctcgg
    21961 ttttagcatc cagatgcagt ttcaattctt cgccgaacac ggctttcgcc tcgtctgaaa
    22021 cgacggggtc ggaaatgccg ccgatgattc cgcccaaacc gaaaatttca actttcacgc
    22081 ccaaacggtg caatgcctga cccagttcca aaccgataac acccggcccg aacacggcaa
    22141 cgcgcttagg cagcgtatcc catgagaaaa cgtcatcgtt gataatcaaa cgattgccca
    22201 aagactgcca ttgcggcagg atgacgggac gcgaaccggt agcaatcacg aaactttttg
    22261 ccgtaatttg agtatgctcg tcgatttgga cggtatgctc gtcgataaat ttagccgaac
    22321 ccatgatgcg cttgccggca ggccactctt ccacatcggc aacgacaaag ccgacaaaac
    22381 ggtcacgctc ggatttaacg cgctgcatga cctcttcacc gttgacgacg atgctgtctt
    22441 tgtccaaatg cacgccgaac gggtcggtat gcaatgcgtg gtggcgcgct tctgcggcgg
    22501 caatcaagag tttggaaggc atacaaccca cgcgcgcgca ggttgtgccg aacacattgt
    22561 tttcaatcag gtaaacatta tccgaatgta aacgggcatt gcgaaacgca cccataccgg
    22621 cagtaccgcc gccgattacg acgacatccg cttgaatttt tttcataatc tttgtccttc
    22681 cgttttcgtc tgaaacattg ccgacacaga acatatcggt ttcagacggc atttaaatat
    22741 tttcccaatc aaaaacatca ttcagataaa taaaaacaaa atttcgattg agtgcaacaa
    22801 tatccaaatt ctcttataaa tatagagtta ttcggatcgg cagtgtagaa ccgcccgaat
    22861 aactctatcc ggtatatcag acagtttaat caaaccgcct taagcaaaca gctatcagtt
    22921 tttagccaag taagcttcta aatcttcgct gccgccgatg tatttaccgc cgatgaagac
    22981 ttgaggggca gtcatcttgc cggtaatggc gcgaacggaa gtaacggttg catctttgcc
    23041 caatacgatt tcttcgtaag acaaaccttt gtcttgcaaa gcttgtttgg ctttagcgca
    23101 gaattggcaa cctggtttag tgaaaattgc cacagactct tgagctttcc aatcaggagc
    23161 aacgaatttc aacatagtat ctgcatcgga tactttgaac ggatcgcctg gttcttcagg
    23221 ctcgatgaac attttttcaa ccacgccgtc gttaaccagc atggagtaac gccaagagcg
    23281 tttgccgaag cccaagtctt ctttaccgac caacataccc ataccttcgg taaattcgcc
    23341 gttgccatca ggaatcatgt agatgttgtc ggattcttct tcggcagccc aagcgttcat
    23401 tacgaacgta tcgtttacag atacgcagta gattgcatca acgccgtttt ctttgaacgc
    23461 gccgaacaat tcgttgtaac gcggcaggtg tgaagaagaa caagtcgggg taaatgcacc
    23521 gggcagggag aatacgacta cttttttgcc tttgaacaaa tcatcggtag acacatcttt
    23581 ccaagtgtcg ccgacgcggg tgcggaatac tacggaaggt actttttgac cggtacaatc
    23641 ttgcaaagcc attttaagct ccttaataga taggtttaag aaatgattgt gaatcgctgg
    23701 gcattctacc ccgaataagt cgatttgtat aatttatagt tcaaataata ttaattactc
    23761 aaaactatta atcaccaacc tcgaccaact ttttacagta tataaagcca tgcctaaaaa
    23821 aaacaagtct tatttgagaa aaattcttag aaactcccct acgcccattt gaaaacagaa
    23881 atgccgtctg aaaagtattc agacgacatc cgatcacgtt atccctgctt atttcgccag
    23941 ttcggcacgc agtttgtggg ttacgttcat catcacttgg agttgttcca gagtttcttt
    24001 ccagccacgg gttttcaggc cgcagtctgg gttaacccac agacgttcaa ccggtacaac
    24061 ctcgatggct ttgcgcaaca gatgctccac ttcggcttct gtcggtacgc gcgggctgtg
    24121 gatgtcgtaa acccccgggc cgatgtcgtt cgggtatttg aattcgccga acgcggtcaa
    24181 gagttccatg tcggaacgtg aagtctcgat ggtgatcacg tccgcatcca ttgcagcaat
    24241 cgcaggcagg atatcgttga actcggagta gcacatatga gtgtggattt gtgtgctgtc
    24301 ttcgcaaccg gtagaggaca ggcggaagga ttcgcccgcc cagttcaggt aggcatccca
    24361 atcggcacgt ttcaaaggca gaccttcgcg gatggcaggt tcgtcaattt ggatgacttt
    24421 gatgccggct ttttccagat ccaatacttc gtcgttcagg gccagtgcga tttgtttgca
    24481 cacggtagcg cgcggaatat cgttgcggac gaaagaccat tgcagaatgg taacaggacc
    24541 ggtcaacatg cctttcatcg ggcgtttggt caggctttgt gcgtaagtag accaggcgac
    24601 agtcatggct tcaggacggc ttacgtcacc gaagataatc ggtggtttca cgcagcgtga
    24661 gccgtagctt tgtacccagc cgtattgggt gaatgcaaaa ccgctcaaca attcgccgaa
    24721 gtattcgacc atgtcgttac gctcggcttc gccgtgtacc agtacgtcca agtccagttt
    24781 ttcttgctct tcaaccacca aggcgatttc ttttttcatc gcggcttcgt aatcggcggc
    24841 agacagttcg ccttttttga aggctgagcg tgcctggcgg atttcggtgg tttgcgggaa
    24901 agaaccgatg ttggtagtcg gtagcagagg taggttcaac catgcttgtt gcgctttgat
    24961 acggtcggca aatggagatt tgcgttggtc tgcgttggca ggcaaatcgg ccaggcgttt
    25021 ggcaacgtct gcacgatgga tttcgctgct gttggcacgg gagtcggcag cagcttggct
    25081 ggcggcgagt tcttcggcaa cagaatcacg gccttcgttc aatgcagctt tcagaacgcg
    25141 caattcttgg gttttttgca gggtgaatgc caaccaagag tacaggtcgg gtttgttggc
    25201 tttcagtttt tcttcaactg acaagtcaaa tggagtgtgc agcagcgagc aagagctgga
    25261 aatccacaaa cggtcaccca gtttggcttg cagaggctcg acagtttcca aaactttgtt
    25321 caggttggcg cgccaaatgt tgcggccatc aatcacgccg gcagacagaa ctttgtcgta
    25381 gtcggcgaac gcgtccagtt gctcgggagc gcgtaccaag tcgatgtgca gaccgtcaac
    25441 aggcagggat ttcaacaatg cggcgtgttc ggcaacagaa ccgaagtaag tgctcagcag
    25501 gattttggca cttactttgc tcaaagtggc gtaaacgtct ttgtatgctt ctacccattc
    25561 tttaggcagg tcaacagtca aagcaggctc gtcgatttga atccactcgg caccggcttc
    25621 aaccaaagca gtcaggattt caacgtaaac aggcaacagt ttaggcaaca ggctcagacg
    25681 gtcgaattcg acggcgcctt tttctttacc cacccacagg aaagtcaacg gacctacaac
    25741 ggtcggtttg gctttcagac cgagggcttg ggcttcttgc agttgttgaa catagtgttt
    25801 ggcattggct ttgaattcgg tatcggcgtg gaattcaggc accaagtagt ggtagttggt
    25861 gtcgaaccat ttggtcattt cgatagcgaa ttggtctttg ttaccgcgcg ccagttggaa
    25921 gaattgttcc aaagacaggt tttggctgtc gaagccgaag cgggcgggaa tcgcgccggt
    25981 ggcgacttgc aggtcgagga tgtggtcgta gaaagtgaaa tcgcctacgg caacgaaatc
    26041 ggcgttggca gcggcctggt gtttccagtt tttctcgcgc aagtctttag caacagccag
    26101 caattcttgc tcgctgattt ctttgcgcca gtatttttct tgtgcgaatt tcaattcgcg
    26161 gaaggcgccg acacgcggga agcctgagaa atgtaatgtt gtcatgttga actctccagt
    26221 tggattttgt aaggaccggt tcaatccgaa tcggccgata ttgtaaatca gaatggctcg
    26281 gatagggcgg cgttttgctt ttcaaacggc ctcggatgcc gtctgaagcc gttttcagct
    26341 ttaagggcgc acgcctaaaa tatggcaaat ggcgtaagtc agctcgctgc ggttaagcgt
    26401 atagaagtgg aaatctttca cgccttcgcg ggacaggact ttgaccatat cgatggcgat
    26461 gctggcggca acaaggttgc gcgtgccttg gtcatcgtcc aaaccttcat acatttgcga
    26521 cagccagctt gggattttga cattggttac ttgagccatt ttaccgagct gcttgaagtt
    26581 ggtaacaggc aaaataccgg ggacgatttc cacatcgata cccaacatca cgcagcggtc
    26641 gcggaagcgc aggtagcgtt ccacatcgaa gaagaattgg gtgatgacgt ggttcgcgcc
    26701 cgcatcgatt ttgcgtttca aattaatcag gtcggcttgt gcggatttcg cttcgggatg
    26761 cacttcggga tatgctgcta cagagatgtc gaagtcggcg acggagcgta atagcttaac
    26821 caagtcttcg gcgtaaaacg gttttttctc ataaccggcc ggctcgtctc cgcgcagggc
    26881 gacaatgcgg cggatgccgc tgtcccaata atctttggca atttggcgca attcgtcggg
    26941 agaagcgtcg ataccggtca ggtgaggcgc ggcttccaag ccggtttcct gtttgatgcg
    27001 tttgacgatg ccgtgcgtgc ggtcgcgttc gccggaattt gcgccgtaag ttacggatac
    27061 gaacttggga tgcagggttt gcagacggtg gatggagtcc cacagcatcg tttccatttg
    27121 ttcgtttttc ggcgggaaaa attcaaacga aacgttaatg tcgcctttca aatcagaaag
    27181 actgttattt aacgcattga tttcttttgc gtaattcatg gctgcgtacc ttttattatc
    27241 ttttatatga tgtttcaggc aacataataa agttgcgcca aacatgagtc aatttcaaaa
    27301 ttttcagatt tatcatgaaa atttctaata tattacaaaa atagttaaat ttccttgtac
    27361 agcccttcta aactatgcta gagtttgtta tgttataaca ctgaaagcaa ggcaatatat
    27421 gaaaccaaat attcatcctg acaattatcg aaccgtcctt tttttcgaca gcagcgccaa
    27481 tgaaggctgg ttaatccgct cctgtgccga aacacacgga aaaacgatgg tttggacaga
    27541 cggcaaagaa tatccgctgt tttcgctgga tacttcttcc gcatcccatc ccgtctatac
    27601 cggcaagcag cgtaacgtca acaccgaagg acgcgccagc aagttcaacc aacgtttcca
    27661 atccgtcatg tcatcgttta gaaaggacaa ataatgcagg ttctgtcttc actcaaaacc
    27721 gccaaacaac gccaccgcga ctgccaaatc gtcagacgca ggggcaaagt ttacgtcatc
    27781 tgcaaaagca atccgcgttt taaagcgcgc caacgctgac tccctgccct tcctgcttcg
    27841 gtt
//
LOCUS       DAWGBY010000012        25996 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.012, whole genome shotgun sequence.
ACCESSION   DAWGBY010000012 DAWGBY010000000
VERSION     DAWGBY010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25996
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.012"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(396..2369)
                     /locus_tag="WHG62_000479"
     CDS             complement(396..2369)
                     /locus_tag="WHG62_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEZ1724640.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDDTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAGGSSNLPVENTACHIQVIAGTKHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVQNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTKTAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWVNHPHAA
                     ALGYEDHNERQRSSLVSTWTDENLSDNGFLTPRPDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQNLQDKADRDHTHIAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRVSGRTSTGPRKRRRRDGLLEALQD"
     gene            complement(2380..2940)
                     /locus_tag="WHG62_000480"
     CDS             complement(2380..2940)
                     /locus_tag="WHG62_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HEZ1724641.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAYTAIRFTYR"
     gene            complement(2937..3548)
                     /locus_tag="WHG62_000481"
     CDS             complement(2937..3548)
                     /locus_tag="WHG62_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ1724642.1"
                     /translation="MAAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNR
                     YDYKNWALSVDGVTSAYVYPLRRGLGTVDIAITSADGVPSEETVRRVQAYIDEMRPVT
                     AKNALVLKPTVTAVPVTVQVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEA
                     AISNVDGVIDRRLTAPTANRAADTVNRIEWFKAGAINVTEMPS"
     gene            complement(3548..3991)
                     /locus_tag="WHG62_000482"
     CDS             complement(3548..3991)
                     /locus_tag="WHG62_000482"
                     /inference="COORDINATES: protein motif:HMM:NF016736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ1724643.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADEPGAAANVATARRN"
     gene            complement(4005..4352)
                     /locus_tag="WHG62_000483"
     CDS             complement(4005..4352)
                     /locus_tag="WHG62_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HEZ1724644.1"
                     /translation="MDKELNPGTGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            complement(4452..5120)
                     /locus_tag="WHG62_000484"
     CDS             complement(4452..5120)
                     /locus_tag="WHG62_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEZ1724645.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            complement(5117..6262)
                     /locus_tag="WHG62_000485"
     CDS             complement(5117..6262)
                     /locus_tag="WHG62_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ1724646.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            complement(6252..7583)
                     /locus_tag="WHG62_000486"
     CDS             complement(6252..7583)
                     /locus_tag="WHG62_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HEZ1724647.1"
                     /translation="MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDL
                     EDMGTTGRQVQINAVFWGKGYAGRLKKLLDALEQPGGGVLVHPVWGRMHNMIAASWSY
                     RHEADYVDYAGIDITFREAAEAQEIFVFENAFLVELEALIADIDTYREAAIGFVDAVL
                     AVDAGVSALWGSALGIWSAASGTFGAVRRLFDLDKIAFPDRGGYSAAAFKNGSAKLFA
                     DISVMVDTGIRREAGLADNAMHHAGWSPRQRFDGAVAVADRAAAIPDNLLTGRFSDGL
                     QNRLNRLTAKQVQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMRRRM
                     QAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGRLNALVAAAINQKPPLI
                     VRQAPIDGTIHQIAHEFYGDMARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            complement(7583..9754)
                     /locus_tag="WHG62_000487"
     CDS             complement(7583..9754)
                     /locus_tag="WHG62_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRTRC system protein F"
                     /protein_id="HEZ1724648.1"
                     /translation="MANGNMKLSLVLTARDDGARRLLADTQRQLDRTAKSRAQLERQS
                     HTYALTGIRSEKQIQREIMLTQAAFNRLARSGKASQNDLARAAVATRNRIRELNAELK
                     QGTGFADKMGKIGRFGAAAVAGGAAAYTVLKPAMDNRKQLDENINRVSRQAFIEDNSK
                     SAAWIATEGAQQIKDLALELVEKNGGTHDKALDLISGMMTTSLNFAQTKNEAQAAYAF
                     ALASEGSGEDTAKLIKTLKDGGMSGKDLQLGLEHVLQSGLDGTFEVRDMVRELPSLLP
                     AAQQAGMNGVGGLDYLLSLLQSAANKSGSPAEAATNVQNLLSKTLSPDTIGRLKKMAN
                     PNDPKKGVDWIGSVVQGKQNGENAVQVLSRLADAMLVKDKQYQDYKKRAAAGDKTAAE
                     QANMLKGALLAQLLPDLQAKQGLLAATDMTQIREYMASLAGVTLDNGKIAKNNEARML
                     SAAAQQEQQESLAMLRESLTGTLVDMETSFKKLAAEYPNATLALQALTTAATAASAAM
                     LLTAGGGKGAGFLKDVGSKALGWGKASAGGVAAGATAAGGKLLSWGKSAGSGLMNNPA
                     LVKRAGLLGMLLYSESLGDGTLPKGLRGTKTTPEMINRLKNNGIRFEPAPKREQARGG
                     VPQYLAAPSAQPTDKMLSPLFSTQTAAYQAAIQQQTAAYQAALAQDTAAVTTGLAQVQ
                     SAMASASQTINTNVSLNIDGRVIANEVSRYQVAMFGRGAGQ"
     gene            9909..10491
                     /locus_tag="WHG62_000488"
                     /pseudo
     CDS             9909..10491
                     /locus_tag="WHG62_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249360.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10535..10804)
                     /locus_tag="WHG62_000489"
     CDS             complement(10535..10804)
                     /locus_tag="WHG62_000489"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724649.1"
                     /translation="MPKTVRRYGEPRRAVGGGAVKRSYLTAHKSYRQAVILMAKAGIG
                     ADAVRDMCHAELSAWFEDILSSLGIKTPKEEGVIVSKRLRKPEGK"
     gene            complement(10744..11109)
                     /locus_tag="WHG62_000490"
     CDS             complement(10744..11109)
                     /locus_tag="WHG62_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724650.1"
                     /translation="MITVKLTHGLTYNGKVVSELRLKPLTVGGELAAFALIDDLPELP
                     ENATKAELLQRDVLETLTYWSQQIEAQGIPSDILTAQWLMENLSTEDYHTVMAAQEDL
                     CLKPSAATASPDAPSAAEQ"
     gene            complement(11113..11490)
                     /locus_tag="WHG62_000491"
     CDS             complement(11113..11490)
                     /locus_tag="WHG62_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ1724651.1"
                     /translation="MSDATYTGAVIMEVNGRDIEIVSIKPQTTTGRKPVKTMNRNGRV
                     NGYCDGVTEHKLSVTAAIPIDGTEIDWDNITKAKITIYPINDEGRRTSYLDCFTVDTS
                     EQYEVDNEARIDIEMIALHKIKE"
     gene            complement(11555..12964)
                     /locus_tag="WHG62_000492"
     CDS             complement(11555..12964)
                     /locus_tag="WHG62_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HEZ1724652.1"
                     /translation="MPHIDFDTIPGSIRVPGQYIEFNTRNAVQGLPQNPQKVLMVAPM
                     LTAGIQPALEPVQLFSDAEAADLFGQGSLAHLMVRQAFANNPYLDLTVIGIADHSAGV
                     QATATVTLSGTATAPGVVEITIGGKQVSTAVNTGETAATVAGRLKTAITAADVTVTAS
                     GSGAAVTLTAKHKGEIGNESGLTVSTGNTGLTYQANVFTGGAKNADIATALSKVAGKH
                     YHIICSPFSDDANAKALSNHITNVFNAIEQRGCIGVLGMSAALSTATTATGKINDGRI
                     TCAWYKGAVEPNGIIAAGYAAVLAFEEDPAKPLNTLEIKGLAVTPDAQWPLFAECNNA
                     LYNGLTPLTVVNNRVQIMRAVSTYTKSANNTDDPALLDITTIRTLDYVRRSVKERIAL
                     RFPRDKLSDRLLPKVKSEILDVLIKLDQAEIIENAEANKGKLVVARAQNDPNRVNAII
                     PADVVNGLHVFAGRIDLIL"
     gene            complement(12967..13164)
                     /locus_tag="WHG62_000493"
     CDS             complement(12967..13164)
                     /locus_tag="WHG62_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HEZ1724653.1"
                     /translation="MSKIKVTAADGLRVPTEHNPHEYIGQEPVEVDGNSLYYRRMIDD
                     GDLVVVEDAAPNTKTRNTKGE"
     gene            complement(13161..13811)
                     /locus_tag="WHG62_000494"
     CDS             complement(13161..13811)
                     /locus_tag="WHG62_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HEZ1724654.1"
                     /translation="MITDIEQAITDRLKRGLGRMVRTVKSYNGEADDLAGQIHTLPAV
                     WVTYGGSKVEPASTGGVCGRYQDTAEFVVMVAARNLRNEQAQRQGGIDSREIGSNDLI
                     RAVRRLLDGQRLGFADSRGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLEND
                     RYPERTDNPDDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ"
     gene            complement(13801..14223)
                     /locus_tag="WHG62_000495"
     CDS             complement(13801..14223)
                     /locus_tag="WHG62_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HEZ1724655.1"
                     /translation="MAYATVEDMVARFGELEVLQLTDRNNEGLIDREVAQTALVDATA
                     EIDAYLGRFRRPFEDLPPILVRLCCDIARYRLTAAQGVLITDEIRNRYKIDVLDLLRA
                     MAKGEVQLGVDDSGEEVAAGEDGIVFVNGKNKVFGRDH"
     gene            complement(14223..14399)
                     /locus_tag="WHG62_000496"
     CDS             complement(14223..14399)
                     /locus_tag="WHG62_000496"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724656.1"
                     /translation="MADSRDVMLVSTGADGKEFWRGGLLFDGGWREVKRAEVGEAVWK
                     AICAEPMLQRKAVE"
     gene            complement(14424..14621)
                     /locus_tag="WHG62_000497"
     CDS             complement(14424..14621)
                     /locus_tag="WHG62_000497"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724657.1"
                     /translation="MAKTNNKPETAETAAPSFEDIKAELDAVQAELAAARNDVEMLTT
                     ALEKAEDDKKALSAELAELKV"
     gene            complement(14686..15594)
                     /locus_tag="WHG62_000498"
     CDS             complement(14686..15594)
                     /locus_tag="WHG62_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HEZ1724658.1"
                     /translation="MDKSAILTAITAAFRKEFQTGLESVKPDYTAVAMTIPSNTATNT
                     YAWLGKFPQMREWVGSRQIEKMNKQAMSLDNKKFEATVGVARTDIEDDQVGMYRPMMA
                     AMGESAAALPDTLVWGLLKKGKTTVGYDGQYFFDTDHPVYEKSDGTGQNTPHSNLTTG
                     TDNDAPTFYVVDDTKTLKPLIFQNRTDSEFETKFDPSKSDRVFMEDEYLYGSRRRCNA
                     GFGLWQLMHMAEKTALTRENLAAIIVKMQKIKADGGYVLNVKPSLLVVPPELEDKARE
                     LLEADKINGTTNTFKGRLKLHVCVHL"
     gene            complement(15594..16655)
                     /locus_tag="WHG62_000499"
     CDS             complement(15594..16655)
                     /locus_tag="WHG62_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724659.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEK
                     DSRIAALTAQTAKPDLTKYAPISVVQELQSKVAALTAKQEADKGNELITAALTSGKLL
                     PAQKEWAEGVLKQPGGLAFLTGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            complement(16886..17302)
                     /locus_tag="WHG62_000500"
     CDS             complement(16886..17302)
                     /locus_tag="WHG62_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HEZ1724660.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            complement(17430..18755)
                     /locus_tag="WHG62_000501"
     CDS             complement(17430..18755)
                     /locus_tag="WHG62_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEZ1724661.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLGNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDTYLTLAYKAPDGSLYTTDRGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQSFGTDLYAMLPDLIHEPEYIFYDKSRGKESFVLLGK
                     PLEGNEKYRLMAVLKYLPQYDSIFLDSFRRADEKEIVKSKKRYEMKKGY"
     gene            complement(18742..20310)
                     /locus_tag="WHG62_000502"
     CDS             complement(18742..20310)
                     /locus_tag="WHG62_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HEZ1724662.1"
                     /translation="MAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDNGLLLRTRENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTMATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPNADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPINRTALAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            complement(20310..21932)
                     /gene="terL"
                     /locus_tag="WHG62_000503"
     CDS             complement(20310..21932)
                     /gene="terL"
                     /locus_tag="WHG62_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEZ1724663.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAIAARRAKVFD
                     PVGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTVLDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWHGIKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYLANKDEMERGAQTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIIIGGYQRETG
                     KLYVVEAQIKKRLPDLIIEDVIRLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFDDEIKSKWSR"
     gene            21944..22456
                     /locus_tag="WHG62_000504"
     CDS             21944..22456
                     /locus_tag="WHG62_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724664.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDGY"
     gene            complement(22453..22959)
                     /locus_tag="WHG62_000505"
     CDS             complement(22453..22959)
                     /locus_tag="WHG62_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEZ1724665.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     AEVEKKFG"
     gene            complement(22962..23159)
                     /locus_tag="WHG62_000506"
     CDS             complement(22962..23159)
                     /locus_tag="WHG62_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724666.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            complement(23156..23422)
                     /locus_tag="WHG62_000507"
     CDS             complement(23156..23422)
                     /locus_tag="WHG62_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724667.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKQDAKADRDNIAASLGRIENKLEKVNEKLDRKADKS"
     gene            complement(23434..23772)
                     /locus_tag="WHG62_000508"
     CDS             complement(23434..23772)
                     /locus_tag="WHG62_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724668.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            complement(23769..23987)
                     /locus_tag="WHG62_000509"
     CDS             complement(23769..23987)
                     /locus_tag="WHG62_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724669.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            24000..24170
                     /locus_tag="WHG62_000510"
     CDS             24000..24170
                     /locus_tag="WHG62_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ1724670.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            complement(24215..24520)
                     /locus_tag="WHG62_000511"
     CDS             complement(24215..24520)
                     /locus_tag="WHG62_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724671.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(24417..24836)
                     /locus_tag="WHG62_000512"
     CDS             complement(24417..24836)
                     /locus_tag="WHG62_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724672.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQVVIE
                     KMKRDKAQAMLLSAQNYARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            complement(24808..25044)
                     /locus_tag="WHG62_000513"
     CDS             complement(24808..25044)
                     /locus_tag="WHG62_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724673.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSLVSVKRQEVENESRETASE"
     gene            complement(25047..25211)
                     /locus_tag="WHG62_000514"
     CDS             complement(25047..25211)
                     /locus_tag="WHG62_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724674.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            complement(25214..25420)
                     /locus_tag="WHG62_000515"
     CDS             complement(25214..25420)
                     /locus_tag="WHG62_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724675.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            complement(25417..25971)
                     /locus_tag="WHG62_000516"
     CDS             complement(25417..25971)
                     /locus_tag="WHG62_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ1724676.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVAAILRDDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNSAAGKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGHHSRLAYAQAGGIVEPFFISNDTDLALFKTTK
                     WGICRAIADAIADAIAMKLGAARV"
BASE COUNT         5299 a         7342 c         6765 g         6590 t
ORIGIN      
        1 gtctggattc ccgcctgcgc gggaatgacg gcggcggggg tttctgtttt ttccgataga
       61 ttcctgttgc gtcggggtct ggattcccgc tttcgcggga atgacggcgg cgggggtttc
      121 tgttttttcc gatagattcc tgccgcgttt ggggtctaga ttcccgcttt cgcgggaatg
      181 acggtggcgg gggtttctgt tttttccgat agattcctgc cgcgtttagg ggctggattc
      241 ccgctttcgc gggaatgacg aaagcggcgg gaatgacgaa gagtggcagg attggcgggg
      301 cataggtttc gggggattgg cggcgcggcc ggtttcggtc ggattgcttg gatcggcggg
      361 ctgaagcccg tctctacagc catctctaca gcccgctagt cttgcagtgc ctcgagcaag
      421 ccgtctcggc ggcggcgttt tcggggtccg gttgatgttc ttccactcac tctttgcggt
      481 tcttcgttgg tttcaggtat ttcggggcct atcggggagc tggcggcgtt tcccgaggcg
      541 gctttgccga tggccatcca gtcgcaactg ccttcgtacc agttggtaat aatggcggcg
      601 gcgtggtttt ttgcgcggat aaacagccag ttgtgttgcc ttcgatcgcc ggtaacgcgt
      661 cccgaatggc gttcggatac gaagcatttg acgttgccgt cggcaaaggc gacggggaag
      721 acgacttcgt tttcgatggg gccgccgctt cttgtaaacc tgtaactgcc ggtctgtatc
      781 attgtgccgt cggggaatct gacaatatcc acgccgccga tggtttggcg tgtgaattgc
      841 gcggcaacgg cggtgctgat tttttcgtcc agcccttgga tttgggcggc gatgtgggtg
      901 tggtcgcggt cggctttgtc ttggaggttt tgcgccagcg tgcccgcgtc cagcgcgcct
      961 gcgttgatgg tttcgccgtg ggactttatc cagaacacgg cttcgcccaa ggtgtcggcg
     1021 gctttgatgc acagttttaa aaccagggct ttggggcggt tttcgtcgcc gcccgttgcc
     1081 attttgctgt ccgggcgcgg ggttaaaaag ccgttgtcgc ttaaattttc gtccgtccaa
     1141 gtcgatacga gcgagcttct ctgcctttcg ttgtggtctt cgtaaccgag ggctgccgcg
     1201 tgcgggtggt ttacccagtg tgaaaatact ttgtggacgt gccgtttgat ttcgtcttcc
     1261 tgcttcgttc cgactgccaa gctgttgcct gcgttgcgga taaagcggtc ttccgcctgc
     1321 gggacgtttt ggatgctgcc gtattttccg gtcagcaggc ggtacagctc gggataagcg
     1381 gttttggtta cgcgcgtgcg gatgtcgtca aacgccagcc agccggtcgg gatttggtcg
     1441 gacggaaacc acgcggtgat gccgatgtcg gtacggctta aatcgggcag gcggttgctg
     1501 ttgcccaggg cgcggtagag gtcggggaag gtgttttgtg caaaggtcgt gccgttggct
     1561 ttgagatagc ctgcggggtt ttgtacggct ttgggaaagg atacgatcgc gccgacgggg
     1621 atgccgtccg aattgagttt tttccatgcg gaccagttgt cgtttgcgct gctcgtttgg
     1681 tggcgttcgt acacgtcgga cgtgtaggcg ggataaccca actgcctgca ccagccgtgt
     1741 ttcgtgccgg cgatgacttg gatatggcag gcggtgtttt caacgggcag gttggagctg
     1801 ccgcccgccg tcggcaggga atagatgccg tctgttttga gggtgttcaa atcgccccgg
     1861 aatgtttcga ctttgaaatt gccgatgccg tatccggaca gtgtgttcgg tttgccttcg
     1921 atgtcttcgg caaaacgcgg tttgttggct ttgtggaaga tgtcgtggtt gttgtaggaa
     1981 atgcggttgt ttgcgccgtg caggcggagg gtgtcgtcgc cgaagacgat gtgggcgttg
     2041 tcggcatccg cgccgatgta ggctttgtgg ccgccgttcc agttcgtctg gttggcggat
     2101 aaatggatgc cgctttggaa ttgggtttgg gcagtaaagg ttttttggcc ggtgatggtt
     2161 tggtcgccgg tggtaactac agccagccta tttagtgctg ccagtaattg attaggctgc
     2221 gacttatccg gctggatacc ggccgcagtc agcacggcca gcagctcgga ttgcacttgg
     2281 ttgagccacc acgcgggcag gatggtgccc aattcggaca cgccgtcgcc gtcgtggaag
     2341 gtcttgtcgg gggtttcgat ggggtgcatg gtttagtcct tatcggtagg taaatcggat
     2401 agcggtgtag gcgggcttga ggcggttgaa caggctctcg atcacggcat cgctgtaatc
     2461 ggtcagcctg tcgcccgccg ccgagatacc ggcgcggaat cgggtaatgc ggttgttgcc
     2521 gccgcgcacg ttaacgtgcc acacccacat gatttcctgc ggcgcaagac ggtcgccggc
     2581 gcggtttaca ccggcgcgga acggctgcgg ttcgtcgatt tggatttgat agcccgccgc
     2641 ctcggccaaa cgcacaaaat aaggaatact caagccgcct gtttcgttta gcttggccat
     2701 gacggccaac acacggcgct ggcggttttt gcccgtaccg tccaaaccta atacgcgctc
     2761 ccaatcggcc agcatttggc cggcgctgcg cgggtcgacg gcatcggcaa cgctttgagc
     2821 cgattccgcc accgcatcca gcgctgcgcc gtctatttct gcctgcgccc gcacacgcgg
     2881 ggcattgcgg gcatacgaca cggggggcaa caggccccgc aagatgtctt gatagctcat
     2941 gacggcatct ccgttacatt aatcgcgccc gctttaaacc actcgatgcg gttaaccgta
     3001 tcggcggcac ggttggccgt cggcgcagtc agacggcggt cgatcacacc atccacattg
     3061 ctgatagccg cctcgatttg cgacacagtc aggccgtcgc cggggatcag ggtgtcgaaa
     3121 tattctttta gggccgtccg tatgcggcgc ttggcctcgt ccaagtcgat gccgtcgagc
     3181 ttgacttgca cggtaacagg caccgccgtt acggttggct tgagtaccag cgcatttttt
     3241 gccgttaccg ggcgcatctc gtcgatataa gcctgtacgc ggcgcacagt ttcttccgat
     3301 ggcacaccgt cggcggaggt aatggcaata tccaccgtac ccaagccgcg gcgcagcgga
     3361 taaacatatg cgctggttac gccgtcaaca ctcaacgccc agtttttata gtcgtaacgg
     3421 ttgccgcctg cgggcggtcg gcggatgatt tccaacagac gcgccagcag tgaggcatcg
     3481 ctttctcggt cggtgccgcc ttgtacggta aggcggcatt cggtggccac accggcgggg
     3541 gcggccatca gttgcgcctc gccgtcgcca cattggcggc cgcgcccggc tcgtcggcga
     3601 ttgccggtat ttccgccgtg ccgccgctgc cgataacggc gcgggcggta gtgcggtaaa
     3661 aacgctggcc gatacgcact tgcaggccgt ctgaaagcat ggattgcgca ataccgctta
     3721 cggtcagcgt gccgctggcc gtggtaggat tgcggcggcg caagccgcgc atggaggcat
     3781 gccgctccaa atactcgcgg tcggcggtat cagggaaaat ctgccgcaca atccagcttt
     3841 gatgcgcata ttgcccttcg gcgcagctgg ccaaacggct ggcgtgcaca taatggtcgc
     3901 tgtcggggct gatatcggca tccggccaca ggcttttggt atcgcgcagg atacgctcgc
     3961 ggatttgctc aaatgtcggc gtttcaaaca cgtttaaaac ctctttaaat cacgggcact
     4021 tcgtggcggt aatcaaaccc gcccgccgcc gtatccaccc ggatatgcag gatcaggcgg
     4081 ccgtcgtgcg gctgctctgc gcgcacggta atcttgtcgg cacgcccgct cttaacaatc
     4141 ggttgcagtg cctcatcggc atattgctcg gccaacaggc tgacccgttg caggtctttt
     4201 tcgcgctgca acaaatgcag cagcgagccg agcgttttat ccgcccacca gctgcccaac
     4261 ggtgtcatca aacggatata cacggcattt tgcagcgtat cgacggtgcg gccggtatag
     4321 tcgccggtgc cggggtttag ctctttgtcc atgttggcat tttgccgttt tcagacggcc
     4381 tcacggagta cacgggcttc aatcccgcac gcacaaaaaa gcagcccgaa ggctgccaaa
     4441 ggtctgcttg tctatgccgg ttccgccggt aaggttttgc cgccgatgct gtcggtatgc
     4501 gggtgctggc gcaacgatat attgccggcc accacgtcgc cgtcggtgtt aaagctgccg
     4561 cccgtttggt taacatcgcc gctaaaggtg gctccgtcgc cgccctcgac ggccatgccg
     4621 ccgttgccgt tgatttggcc ttgcgccgtc aacactgcac tggtctccac caacggagcg
     4681 ttaaatttgg catccgtggc cgcattaacc tcgtattgtt tgcagttaac ccggtacacg
     4741 tcgcaatcgg cctcaatgat tttgccttgc ttaatcacga tttttgcacc ctcatgatta
     4801 aaaatcgccg tctcgccggg cttaaggttt ttgatgcggt agctgccgtg ctggctgcac
     4861 acaatcacac cgtgcgaagt attgccgccc agcggtatca ctaccgcttc gctgccgtcg
     4921 ggcggatggc tggcaaagcc gtattcctgc aaatgttcaa ggtcttgcag ggtttcgtcg
     4981 gccaagccgc tcaactgcac gcgctgtatc ggctcggacg acaccaccag cgtgattttt
     5041 ccccgaaagg ccgcgcgcag ggtttcgccg atatttttag cagtttgtgc cgtttttttc
     5101 gccaatttac tcaaactcat tcaaacaccg ccgtttctgc ttgttttttg ccgccttttt
     5161 tgcccttatg gctcacgcct ttgcgtttgc ctttgcgctt gcgcgccgcc tcggcctttt
     5221 tggggtaagc gtcgggtgtc caaataccgt cctctttgag ccgcagctcg gtttgcgtgc
     5281 catccatgcg ggatagcata aaccgccgcc ccatcagaaa aaacaccgca tcgataccgt
     5341 gctcgtcgtc gatcacatgc acacgctggc caggttgcca caatacgccg tcgcgggttt
     5401 tatggccgcc cacggttatc gtgagtgtaa atccctccag ccgccagtcg gccagctgct
     5461 ttttagcctg cttttgcaat gcggccaaat tgtcggcatc ggacaccacc accgttttag
     5521 ggcggtgcag cgtcatcgtc gggtctttgt acacccactt taaatcgtgt ttggcgctgt
     5581 cgccgctgcg gccgtgcgat tgcgccaaaa aagtaacctc ggaaaagcgg ttgtcggtat
     5641 cccactcaat gtccatgcgc tcgatattgc agcggctgtc ggtgcggctc caacacaatg
     5701 tcgccaccgg cgggctgctg taatccgcac cgcccaccac caacgtgccg tccggctcca
     5761 gccacggatg cagcccgacc gagttggcaa tatgggttaa tgcctgccat acggtttcgc
     5821 ccggctcgat gtcgattttg tccaaagcgg ggttgttttc ggccttaagc accaccgctt
     5881 taatctgcgg ccacggcgcg gccagctttt tggctgcatc caataccgtc atgcccttta
     5941 cattgagctg cggcgcggag caatccacca aaaaaccggc caaatcacgc ccgctcaagc
     6001 tcaactcgcg gctgcccttg cttttgccgt ggcgctggct gccgatgatg cccgtcatca
     6061 cgatttgccc gtctatcact acctcgcagc tctctccgct taaatcgggt atggccgcct
     6121 ccggccccaa cctgccgatg acaaaatcga agctgtcggc agggattaaa aagtcgctgt
     6181 cgatgtcgta gcgctcccag tggcggtgct ctttaccgcc cacgcgcacc gacacggcat
     6241 agccgtatga attattttgc atagctgttg accaaagtgc cgcgcttgat aaacgcgggg
     6301 tggtggatat ggggattgag ccgcaccagc tctgctgcgc gggccatatc gccgtaaaac
     6361 tcgtgggcga tttggtgtat cgtaccgtcg attggggctt ggcgcacaat cagcggcggc
     6421 ttttggttga tggccgccgc aaccaacgca ttcagacggc ctgccgccgc gcgcagggat
     6481 tctgccgttt ggtaagcctc ggtatacacg gcgttggccg tcagcccacc agactcggca
     6541 gcagccgtct gcaccgcccg caaggcggca atctcggcct gcatacggcg gcgcatggcg
     6601 cggttaacct caatcaaatc gggcgcggtc atctcttcgc catgcgcctc gattaatgcc
     6661 gttgccaccg acaacagcga tgacgtggat aacaggcgca ccgcctgcgc taccggctgc
     6721 acctgtttgg cggttaaccg gttcaggcgg ttttgcaggc cgtctgaaaa gcggccggtc
     6781 agtaaattat cagggatagc ggcggcacgg tcggcaacag ccacagcccc gtcaaaccgc
     6841 tgtcgcggcg accaaccggc atggtgcatg gcattatcgg ccaaacccgc ctcacggcgt
     6901 atgccagtat ctaccatgac cgatatatcc gcaaacagct tggccgagcc gtttttaaac
     6961 gccgctgcgc tgtatccgcc ccgatcggga aaggcaattt tgtccaaatc aaacaaacgg
     7021 cgcaccgcac caaacgtacc cgatgccgca ctccaaatgc ccagcgcgct gccccataaa
     7081 gccgatacgc ccgcatccac cgccaacacc gcatcaacaa agccgatagc cgcctcgcgg
     7141 taggtgtcga tatcagcaat caacgcctca agctcgacca aaaaggcgtt ttcaaaaaca
     7201 aagatttcct gcgcttcggc cgcctcgcgg aaagtaatat cgatgcccgc ataatccaca
     7261 taatcggcct catgtcggta gctccatgat gccgcaatca tgttgtgcat ccgcccccaa
     7321 acagggtgca ccagcacgcc gccgcccggc tgctccagcg catccagcag ctttttcaga
     7381 cggcctgcat agcccttgcc ccaaaacacc gcattaatct gcacctgccg cccggtcgtg
     7441 cccatgtctt caaggtcgat accctgcaca aacggccgcg catgctcggc caatgccttg
     7501 ccgttgctct cgtccaccac ctcaatatca aagccgacgc ccttgtaaga tgcgtcctgc
     7561 aataaggtat gccatccgct cattattgac ccgctccacg gccgaacatg gccacttgat
     7621 accgcgatac ctcattcgcg ataacacgtc cgtcgatatt caggctcaca ttggtattga
     7681 tggtctgact tgccgacgcc atcgcacttt gcacttgtgc caaacctgtt gtaactgcag
     7741 ccgtatcctg cgccaatgct gcctgatacg ccgccgtctg ctgctgaatg gctgcctgat
     7801 acgccgccgt ctgagttgaa aacaacggag acaacatctt atcggtaggc tgcgctgacg
     7861 gagcagccaa atactgaggg acaccacccc gcgcctgttc ccgcttcggc gcaggttcaa
     7921 atcggatacc gttgtttttc agacgattaa tcatttcagg agttgtcttg gtaccacgca
     7981 aaccctttgg caatgtgccg tcacccaaag actcggaata cagcaacata cctaacaaac
     8041 ccgcccgttt aactaacgct ggattattca tgagcccgct accggcagat tttccccatg
     8101 acagcaactt accgcctgcc gctgtggcac ctgctgccac gccgcctgcg gaagccttac
     8161 cccatcccaa cgctttacta cctacatctt tcagaaagcc tgcaccttta ccgccaccgg
     8221 cggttaataa cattgcggca gacgccgctg ttgccgccgt cgtcaatgct tgcagggcta
     8281 gagtggcatt agggtattcc gctgccagct ttttaaacga ggtttccata tccaccaatg
     8341 ttcccgtcag actttcccgc aacattgcca gcgattcctg ttgctcttgt tgcgccgctg
     8401 ccgacaacat tcgcgcctcg ttgttcttag caatttttcc gttatccaac gttacgccag
     8461 ccaacgaagc catatattca cggatttgcg tcatatccgt tgcagccagc aaaccttgtt
     8521 ttgcctgcaa atcaggcagc agttgcgcca aaagcgcgcc cttaagcata tttgcctgct
     8581 ccgccgccgt cttatcgcct gcagccgcgc gtttcttata atcttggtat tgcttatcct
     8641 ttactagcat ggcatcggca agacgggaca acacctgcac tgcgttttcg ccgttttgct
     8701 tgccttgcac aaccgagcct atccaatcga cacctttctt cgggtcattc ggatttgcca
     8761 tcttcttcag acgacctatc gtgtcaggcg acagagtttt actcaaaaga ttttgcacat
     8821 tagtcgccgc ttcggcagga ctgcccgatt tattcgccgc agattgtaag agtgagagca
     8881 ggtagtccaa accgccgaca ccattcatcc ctgcctgttg cgcggcaggg agcaggctcg
     8941 gcagctcccg aaccatatcc cgcacctcga aagtgccgtc taaacccgat tgcaagacgt
     9001 gctcaagccc gagttgcagg tctttaccgc tcatgccgcc atctttcagg gttttaatca
     9061 gttttgccgt atcctcgcca ctgccttctg aggcaagtgc aaaagcatat gccgcctgcg
     9121 cttcattctt ggtttgggca aaattcagac tggtggtcat catgccgctg attaaatcca
     9181 aagccttatc gtgggtcccg ccatttttct cgacaagttc aagtgccaaa tccttgatct
     9241 gttgcgcacc ttcagttgca atccacgctg ccgatttact gttatcctca ataaatgcct
     9301 gtctggacac gcggttgatg ttctcatcaa gctgctttct gttgtccata gcaggcttaa
     9361 gcaccgtata cgctgccgcg ccaccagcca ccgcagctgc accgaatctt ccgatttttc
     9421 ccatcttgtc cgcaaatccc gtgccctgtt tcagttccgc gttcagctcg cgaattcggt
     9481 tacgcgtagc gaccgccgcc cgtgccaaat cattttgtga tgccttgccg ctgcgcgcca
     9541 aacggttaaa cgcagcctgt gtcagcatga tttcgcgttg aatctgtttt tctgagcgga
     9601 tgccggtcaa cgcataagta tggctttgcc gttcaagttg cgcccgcgat ttcgcggtac
     9661 gatctaattg tcgttgagta tcagccagta gccgtctcgc tccgtcatct cgggcggtta
     9721 acaccaacga cagtttcatg ttcccgtttg ccataaaaag cagcctttaa acgtattaac
     9781 tcaaggtcaa ttatcgttta aaggctgttt aagggaggcg gtatgggctt caaccccgtt
     9841 ttcgtgcttt atttgtttgt tgcgttataa taccagaatg ataaccattt tattcaaagg
     9901 gatattttat gaatatgaaa aaattgattt ccgcaatttg tgtttcaatt gttttatcag
     9961 cctgcaacca acaatcaaaa acggcacaag ccgaagaacc tgtccaaagt atctaggctg
    10021 ctgattgtac cgccccaatg gacatcacag ttgaacaata tctcatcaat ttggagcaag
    10081 catttaaaac tcagaacgtc tcaacaaaaa tccataataa aaatattgtc aagaccgatt
    10141 gtggttatga ccttactttg gtaatggatt ttggggcgat tgcgctcaaa ctggacgagc
    10201 agcaaaaaat tagagctatc tcagtaggct acattttaaa aaccgacgga gagaaaggac
    10261 aaaatctagt caataatgcc ataaatggat tacacagtat tcaggcagtt ctgtctttaa
    10321 ctaccacaga caaattgggc gaatcggaag caggaaaaca acttcgtcaa agaatccaat
    10381 cagacaggag caacagcgca aaaagacgtt ccggcagatg gtattttata tagcgttgtt
    10441 tttgaaaaag aaacaaacac cattgcaata atcggcagaa aacaacccta accgtcaaat
    10501 aaaaaaaagg tcgtctgaaa ctcagacgac ctttttattt tccctccggc tttctcagcc
    10561 gtttcgacac aatcactccc tcttccttcg gcgtttttat gcccaggctc gacaggatgt
    10621 cttcaaacca tgccgacagc tcggcgtggc acatatcgcg cactgcgtcc gcccctatcc
    10681 ccgcctttgc catcaggatg accgcctgac ggtagctttt gtgtgccgtc aggtagctgc
    10741 gttttactgc tccgccgccg acggcgcgtc ggggctcgcc gtagcggcgg acggttttag
    10801 gcacaaatcc tcctgagccg ccatcacggt atggtagtct tcggtagaga ggttttccat
    10861 cagccactgc gccgtcagga tgtcggatgg gataccttgg gcttcaatct gctgcgacca
    10921 gtaggtcagc gtctctagga cgtcgcgttg cagcagttcg gcttttgtgg cgttttcggg
    10981 cagctcgggc aagtcatcaa tcagggcgaa cgccgccagt tcgccgccga cggtcagtgg
    11041 cttgaggcgt aattcagata cgactttgcc attgtaggtc agcccgtggg tcagtttgac
    11101 ggtaatcacg cattactcct tgattttgtg caaagcaatc atctcaatgt cgatgcgtgc
    11161 ctcgttatcg acttcatatt gctcgctggt atcgacggta aagcagtcga ggtaggaagt
    11221 gcggcgacct tcgtcgttga tggggtaaat cgtgattttc gccttggtga tgttgtccca
    11281 gtcgatttcc gtaccgtcga tcggaatggc ggcggtaacg cttaatttgt gttcggttac
    11341 gccgtcacaa taaccgttga ctcggccgtt gcggttcatc gttttgaccg gcttgcggcc
    11401 tgtagtggtt tgcggcttga tgctcacaat ctcgatatcg cggccgttca cctccataat
    11461 caccgcgccg gtataggtag cgtcgctcat gctttatcct tttttaaggt ttcagacggc
    11521 ctttaaacct gttttaaacg ccgtctgaaa agggttacaa aatcaaatca atgcgcccgg
    11581 caaagacgtg caggccgttg accacatcgg cggggataat ggcattaaca cggttggggt
    11641 cgttttgcgc acgcgccacc accagcttgc ctttgttggc ctcggcgttt tcgatgattt
    11701 cggcttggtc gagcttaatc agcacgtcca aaatctcgct cttaaccttg ggcagcaggc
    11761 ggtcgctcaa tttgtcgcgc ggaaaacgca gggcaatgcg ctctttaacg ctgcggcgca
    11821 cataatccag cgtgcgaatg gtggtaatgt cgagtagtgc cgggtcgtcg gtgttgttgg
    11881 ccgacttggt ataggttgat acggcacgca taatctgcac gcggttgttg accactgtga
    11941 gcggggtcaa gccgttgtac agcgcattgt tgcattctgc aaacaacggc cattgcgcat
    12001 caggtgtaac ggccagccct ttgatttcca gcgtgttcag cggcttggca gggtcttctt
    12061 caaaggccaa caccgccgca taacctgcgg cgatgatgcc gtttggctct accgcacctt
    12121 tgtaccaagc acaggtaatg cggccgtcgt tgattttgcc ggtagcggtg gtggccgtgc
    12181 tcaaggccgc actcataccc aatacgccga tacagccgcg ctgctcgatg gcgttgaata
    12241 cgttggtaat atggttgctc aaggctttgg cgttggcgtc atcgctaaac gggctgcaaa
    12301 taatgtgata atgcttgccc gccactttgg acaaggccgt ggcaatgtcc gcatttttgg
    12361 caccgccggt aaagacattg gcttgataag tcaggccggt attgccggtg ctcacggtta
    12421 agccgctctc gttgccgatc tcgcctttgt gtttggccgt cagcgtaacg gctgcgccgc
    12481 tgccggatgc ggtaacggtt acatcggcgg cagtgatggc ggttttcaga cggcctgcca
    12541 ctgtggcggc ggtctcgccg gtgttaacgg ccgtgcttac ctgcttgccg ccaatcgtga
    12601 tttccaccac gcccggcgcg gtggccgtgc cggaaagggt aacggttgcg gttgcctgca
    12661 cgcctgcgct gtggtcggca ataccgataa cggtcaaatc caaataaggg ttgttggcaa
    12721 atgcttggcg caccatcaaa tgcgccagcg agccttgtcc gaacaaatcg gccgcctcgg
    12781 catcgctaaa tagttgcacc ggctctaagg cgggctgtat gcccgcggtc agcatgggtg
    12841 caaccatcaa taccttttgc ggattttgcg gcaaaccttg cacggcattg cgggtgttaa
    12901 attcaatata ctgcccgggc acgcggatgc tgcccggaat cgtgtcaaaa tcaatatggg
    12961 gcatcattac tctcccttag tattgcgggt tttggtattt ggggcggcat cctcaaccac
    13021 caccaaatcg ccgtcatcaa tcatgcggcg gtaatacagg ctgttgccgt ccacctccac
    13081 cggctcttgg ccgatatatt cgtgcgggtt gtgttcggtc ggcacacgca ggccatctgc
    13141 cgccgttact ttgattttgc tcattgctta tccttaaggg ttaggtttac aggtatttca
    13201 tcggcggatt gcgggtcgta aattttgccg tccaacccct cgaaatcagg ccacggctcg
    13261 ctcaatgtac cctgatactt ggtaaagata tggttggggt cgtcgggatt gtcggtgcgt
    13321 tcggggtagc ggtcattttc caacccgcag gtgttaaagc ggatggcata ctcaaccgca
    13381 tatatgctta ctgcggcgtt ttgcaccagc acatgattgg caatcgcgcg caccgctttg
    13441 ggcaccaagc cgcggctatc ggcaaaaccg agccgctggc cgtcaagcag gcggcgaaca
    13501 gcgcggatta aatcgttgct gccgatttcg cggctgtcga tgccgccttg ccgctgcgcc
    13561 tgctcgttgc gcagattgcg ggccgccacc atcaccacaa attcggcggt atcctgataa
    13621 cgtccgcata cgccgccggt gctggcaggc tcaactttgc tgccgccata cgttacccaa
    13681 accgcaggca gcgtatggat ttgccccgcc aaatcgtcgg cctcgccgtt gtagctttta
    13741 accgtgcgca ccatgcgacc caagccccgt ttcagacggt ctgttatcgc ttgctcaata
    13801 tcagtgatca cgcccgaaca ccttattttt accgtttaca aacacaatac cgtcttcgcc
    13861 cgcggccact tcttcgccgc tatcatccac gcccagctgc acttcgcctt tggccatagc
    13921 acgcagcagg tcgagcacgt cgattttgta gcggttgcgg atttcgtcgg taatcaacac
    13981 gccctgagcc gccgtcagac ggtagcgggc aatgtcgcag caaaggcgca ccaagatggg
    14041 cggcagatcc tcaaaaggtc gtctgaaccg ccccagatac gcgtcgattt cggcagtggc
    14101 gtccaccagc gcggtttgtg cgacctcgcg gtcaatcagc ccctcgttgt tgcggtcggt
    14161 gagctgcaag acttccagct caccgaaacg cgcaaccata tcctcaaccg tcgcgtatgc
    14221 cattactcga ccgccttgcg ttgcagcata ggctcggcgc agattgcctt ccacaccgct
    14281 tcgccgactt cggcgcgctt cacttcacgc cagccgccgt caaacagcag gccgccgcgc
    14341 caaaattctt tgccgtctgc gccggtactg acgagcatca catcgcggct gtccgccaaa
    14401 gcgtcggcgg cgcgttgcgt atgctacact ttgagttcgg caagttcggc ggacagtgcc
    14461 tttttgtcgt cttcggcttt ttccaaggct gtggtcagca tttcgacatc gtttcgggcg
    14521 gcggcaagct ctgcctgcac ggcgtccaat tcggctttga tgtcttcaaa cgacggggcg
    14581 gcggtttcgg cggtttctgg tttgttgttg gtttttgcca tgatgactcc ttgtttcaga
    14641 cggcctttaa ataggtgtta aaggtcgtct gaaaacggtt cggggttaca ggtggacgca
    14701 aacgtgcagt ttcagacggc ctttgaaggt attggtcgtg ccgttgattt tgtcggcttc
    14761 caataattca cgggctttgt cttccagctc gggcggaacg accaagaggc tgggcttcac
    14821 attcaacaca tagccaccgt cggctttgat tttctgcatt ttgacgataa tggcggcgag
    14881 gttttcgcgg gtcagcgcgg ttttttccgc catgtgcatc agttgccaca aaccgaaacc
    14941 ggcattgcag cggcggcgcg atccgtacag gtattcgtct tccataaaca cgcggtcgga
    15001 tttggacggg tcgaatttgg tttcaaactc ggagtcggtg cggttttgga aaatcagcgg
    15061 cttcagggtc ttggtgtcat cgacgacgta gaaggtcggc gcgtcgttgt ccgtaccggt
    15121 cgtcagattg gagtgcggcg tattctgacc cgtgccgtcc gatttctcgt aaacggggtg
    15181 gtcggtatcg aagaaatatt ggccgtcata accgacagtg gttttacctt ttttgagcag
    15241 accccacacc agcgtatcgg gcagggcggc ggcggactcg cccattgccg ccatcatcgg
    15301 gcggtacatg ccgacttggt cgtcttcgat gtccgtacgc gctacgccga cggttgcttc
    15361 aaactttttg ttgtcgaggc tcatcgcctg cttgttcatt ttttcgattt ggcgcgagcc
    15421 gacccattcg cgcatttggg ggaatttgcc gagccacgca taagtattgg ttgccgtatt
    15481 ggacggaatg gtcatcgcaa cggcggtata gtcgggcttg acggattcca aacccgtttg
    15541 aaattctttg cggaatgctg ccgtgattgc ggtcaaaatc gctgatttgt ccattactta
    15601 ccttcgcttt ctttgatttt tacaaattct tcgccggaca tgcccagcat ttttgctgcg
    15661 gctgcctctt ccgcagtcag tgcggcgacg cgttcgtcgg gtgctttacc gcccgtttgc
    15721 gagcctgcca gtgcagcgac cggctgggcg ttttcaataa agccggtcaa aaatgccaag
    15781 ccgcccggct gtttcaatac gccttctgcc cactccttct gagcaggcag caatttgcct
    15841 gaagtcagcg cggcggtaat caattcgttg cctttgtctg cttcctgctt ggcagtcagc
    15901 gcggcgactt tgctttgcag ctcttgaacc actgagatag gcgcgtattt agtcaaatca
    15961 ggcttggcgg tttgcgccgt caatgccgcg atgcggctgt ctttttccgc cagctgcgcg
    16021 aacacgtcgg cagacaatgc cacgtctttc ggcttggctt ccacgagcgc ggacaatgcc
    16081 gccttcagtt cttcttcgcc cgcatcaggc agaccgaaca gttgctgtaa caactctttc
    16141 atagggtttt gctccgtttc cggttttaaa atttgcgccg acgctgccgc cagcacctcg
    16201 tccataccgt ccaacgcggg gaaatttgtc agcgcggcgt gaaaaatttt gcttacatat
    16261 ccctttgtgt cataggaaaa cacagcagag atgtagcgat actcttttgc ggcaattgcc
    16321 gcagccgcct tgtccgtcca ctccacttcg gcaaacatgc ctttaggcgt gaactccagc
    16381 caacgcatcc aaccggcggc aggtgcaggt tgtccgtttt tctctttgta gagcgtctgg
    16441 tgttcataat cgacaaccaa ctgattgcgc gagctgttgg ccaacaacgc gacatcatga
    16501 ccgttttctt cggtcagata ccacgcaggg acatcagtcg gacgaccgtc tactgcgcga
    16561 aattcgccat atggcagcag ttggattcgc ccgtcttttg gctgcacctc gaaactgcac
    16621 acggcaagta gggttttttg tgcatttttg gacatgtgta cctctctcaa tacggtcatt
    16681 ttgcctattt gaaaaaacaa caaagagtag gcgtgcttca aaccctcccg ccattttttt
    16741 aaaacctgtc cgcgcgatac acaattaatc gttttcaggg gctttttaga agcgtctagg
    16801 attgattttt atatcttggg caggggtttg tattacccgc ataaaaaaac gcgctaaaaa
    16861 gcgcgttttt gagggtttta taaattcacg gtatcagacc cgaaaaataa tcctgcacat
    16921 cgtccatcaa agcctgtttg tcgtcgtccg tcagcgtcaa aaattcccgt tgcggaatcc
    16981 gaactttgcg gttgcgcccc gccataccgc cgaagttgtg gatggcggca tagacgatat
    17041 tcgtaccgac aagggctgta tcgttgtctg acagtgtgga aaaactgtct ttcagacgac
    17101 ccgaatccga aagcggcttg ccgtcgcggt attttagccc caaccatttc ggacggcctg
    17161 cgtagcggaa attgagcttg accgccgtgt gcatggtttc ggacagtcgg cgcatcagca
    17221 ggtagcggtt ttcgatcccg ttgccaagcc gctcgatttg gtttaggacg acaaagatat
    17281 tgtctatttt gacatcaatc atggtattat cctgcctagg ctactaaaaa agcggtgaat
    17341 ttgtctgccc tccgcagccc ttatgcagtc ctcggactgg gattggtatc cgttacataa
    17401 gcgagagtgt gtcgggattg cagtccgact tagtagcctt ttttcatttc atagcgtttc
    17461 ttacttttca caatttcttt ttcatccgcc ctgcgaaacg aatccaaaaa aatcgaatcg
    17521 tactgtggca gatatttcaa aactgccatc aatctgtatt tttcgttccc ctccaacggt
    17581 tttccgagca aaacaaaact ttcttttcct ctgcttttgt cataaaaaat atattcgggc
    17641 tcatgaatca gatcggggag catggcatat aaatctgttc caaacgattg cccctcccga
    17701 ctgtccacct gtttgaccaa tgtatcatca gacagccaca ccgtcgctcg tgtcatacct
    17761 gccaattctt gcgtttcctt gctcaataca cccgcagcaa atttaagctg tcttgatagc
    17821 gcatttcgga ttttgatttt ctgctcttta tcgggcttgc catcaatatc caaacgttgc
    17881 ttgacttcat aaaactcttt ttcaagctgt ttaaagctgg ttttaaaatc cgcaccaccc
    17941 atttccgctt tggcaaattg atgcgccaac gcacggtcgt acttgtctaa atcggggcgg
    18001 tagttcattc gtccggcgtt gtaatcaaat cctcgatcgg tcgtgtacag actgccatcc
    18061 ggtgctttat aggcaagggt cagataagta tcgccttttt tgttgtagat tttatgggtc
    18121 tcgaccagat tgtccgccgt gctttgcccg acaatccgcc cctggcgttc cacatcccgc
    18181 tccgacagcg cgatgaccga gcaacggcag ttgtagccgt tgggcgggta aaacgttgcc
    18241 caaaacgggt cgtcgtagcg gtacaccagc ccgtctattg ccgaatgcgc cggacgggtg
    18301 cggctgtcgc ctaccgcgtc atacatccaa taaggccgtg catcaatatt tgccatatat
    18361 ccttgatatt gaccggcgtt gtaggcagtt tgcatgttgg tacggtaaat cgtctccaac
    18421 ctccgcggcg aaccgaatac ctcgccggtg gctgggtcga tgatatcctt accgttatgc
    18481 ccgttcggat gcagccagcc cttgttgccg agcagattca agataccttt tcgccaatcg
    18541 tcaaacgact gtccactttt tgccgattca accatcgaag ttttgatgtc gttgagcata
    18601 tccaagtcgg tcatgcgggc aatcgtatag actttggcaa tttcggaggc tgtcagattg
    18661 cggtagctct ccgccgtaac ctttttactt tccagccact cgattgcctt ttttggcggc
    18721 agacttaagg caaatcccaa atcaggcgcg ggcatggtct tgtcccaaaa tatcgctgat
    18781 aaacaaggcc tgctgcatat aggtacgcag tttcgcgttg tccaaattcg gataaagcgc
    18841 attcagtgcg gcatctgcct cctcgtagct gttgcaagca ttaagtgcgg caaccgcctg
    18901 acgcaccatc gggttgagct gagaattgaa atcgggctca accagcgcgt catccaacgc
    18961 gccgtccaat atttcctgat gcctgcccgt agccttagat ggtacggtgt gggcggataa
    19021 agccgccaat gcagttctgt ttatcggatt gtccggtacc tgccgcacca acacagcctc
    19081 accctcctgc acatctggaa tgaccagttt gtcgcgcacc cagctttcgg ggatttgtac
    19141 gccgacatcc accagtttcg ggatagcgtc ggcaaagacc gcgatgtctt tcggctcgcg
    19201 cgtgtcaaat tcaaatttcg gtacgcggtt tgggtcggca ttgggatagt tgatttgcag
    19261 gaacggtccg atgatttggc ttgtgatggt ttgcgccacc tgttttgcgt ccgacaccag
    19321 caaatcgcgg cgtacctcgt tgtggatatt gcccagcgcg ttggtgctgg attttccgtc
    19381 cgcaccgctg gttagcgttt gccccaaaat cagccgcgcc gccgattttt cgcaccagtc
    19441 ggccatctgc aaaaacggat tgctggttgc catcgtaccg cttgcagcgt tgtgcagctc
    19501 gatttccata ccttctggca tgatgcctgc cgcgttgtga ccgatttccg ccaccgctcg
    19561 aagcagggtg tttttttcct ctttggttgc gcccgcgccg tatttgccga tacggatggg
    19621 catgccgtac agctccaaaa actcggcaaa atcgtggacg gcgtagtgtt tgaacatata
    19681 cagccaggaa agcgtgcgga aaagcccgtt gcgcgcctgc tggacgctgc gcgatttttg
    19741 ggtatgaacg acccagccca gcggccacaa cgcttcgcct tccggatttt cgcgggtacg
    19801 cagcagcagc ccgttgtctt tgtcccattt gaaccagctt tgcgggcggt ggataaagtt
    19861 tcggggtagg taaaggccgt ctgaaaatac ccactcgacc tccaacgcag aaaatccgtg
    19921 ccctaccgcg tccatcaaat ccataatcag gtcttcgagg gtaggcaggc tgtccatcat
    19981 ttcgtaggct tggtcggaca gcttttcttc ttcgggcgtc gcatttcgcg gcggggcgac
    20041 gcgccagttg agcgtcagca gcgcgcgttt gcgcgtcccc atatttgccg cgatgtcgct
    20101 gtcgcgctcc tcaatgtccg cgaaaagctc gtgttgggcg cggatgtcgc cgctttccgc
    20161 atcctcgaag agggcccgca tcttttgcgg tgtaataaaa ttggacggat gctcggcgat
    20221 aacccgaccg gtcgccgtaa tttgagccac gtccgtctgc aatgcagctt cgggcttttg
    20281 gattttagtt ttattgttct tttttgccat tatcggctcc atttactttt tatctcgtca
    20341 tcaaaatcgt tatcggtagg gctttgccat tctatcggca cacaattggc caccgccccc
    20401 gaccagagca tatgcactgc atcaggacca tcatcatgat cagcctttgg aaaatggcgg
    20461 aactgctgta tcagcgtctg ttggctctca ttcaacagaa tcaaaccgtt cgccatgtga
    20521 ggctgtaaag tctcaatccg caagagcttg tccgataccg gcttgaccgc ccgcgccggg
    20581 acaggtattc cacgcgccgc gctgcgcttg accagctcat ctttcaaaaa ttcctgaaac
    20641 tgaaccgtct caacaaacca cagtttgcaa cgatattgac ggtgcaatct gataacgtcc
    20701 tcaataatca aatcagggag acgtttttta atctgagctt ccacgacata cagtttgccg
    20761 gtttcacgtt gataaccgcc aatgataatc gccgacgggt cacggctcgc ccccgcttta
    20821 cccagcgacg ggtcgagcgc accgaaatac accaaatcgg acggcaggtc gttccaaaac
    20881 ttcatcgact tggcaaacgg cgcatcttcg ccgctgaccg ggtcgttttg atattcgctg
    20941 tcaaatgtcg catgaccgtc acgcgcacgg attttcatca gcgcgagtac gccgcgagcc
    21001 gcccagcttg tttgcgcacc gcgctccatc tcgtctttat tggcgagata aaacgcctcg
    21061 gccacagtct cgccgtcgtt tcggaaaagt tcctcccatc tgtcccacaa atccatgcgg
    21121 tcgggccagc gtttcatcgc cttaaactta ataccgtgcc aaaacgggtt attcaaagtg
    21181 cggttaagta cgctgtcgta atgcaaaatc gtgccgatat atatcacatc gtatttctgg
    21241 ccgacaccgc ccaaaggcaa tacagtctta gtcagccacg cattgagctt gtcgcgctgt
    21301 tcggggttgc ggacttgctc gtcattctca atatcgtcca aaacagttaa gtcaggacgg
    21361 taagggccgt gacgcaaacc gcgcagcttt ttaccgctac cggccacttg gactttaacg
    21421 tcattggccg tcacaatcgt accggcctgc catacgcggc cctgcccgca tacttccgga
    21481 aagtcggttt tcaagcgcgg attaaattcc aattccgcct tgatggcttc gagcatcggg
    21541 tatgcctgat ctatgctgtc catcacaata acggcataat gtttttggcc tgtcacaata
    21601 caccacagcg taaacaactg agtaacctgc gtcgacttac cctcgccacg cggcgcaccc
    21661 accgcctcat tttccccttt gggggagcgg ataatctccg gcagacggct gaataaaaac
    21721 gcatgcagtt cggatttttc aggggagcgg atataatgcg gaaagtaggt gttgacgaaa
    21781 tactcgtaac cgcctaccgg gtcaaacacc ttggcacggc gtgcagcaat agccttgggc
    21841 gacgcatcaa agccgtccac ttccgcttcg atgacttggc gcaaactggc ggccagttcg
    21901 gcaagggatt tgaggaattc ttttgttttc atgagtattt ataatgactg gattcatttc
    21961 taacgcattt ataggcctaa aagaagcagg atcactttta aaagggttta accagctcaa
    22021 aacagaggca gaggtagcgc aaaaaaccat cgaacttaat caaatcattg ctggtattca
    22081 aactgattta tttgaagccc aatcttctta tacggcggca attagccgta tagatgagtt
    22141 ggaaaaagaa ctggtggcag taaaaaattg gtctacagag aagcaacgct accaattgta
    22201 tgaacttgct cctggttctt tcgtctatcg attgaaaaca gagatggcga acagcgagcc
    22261 aattcatgat atttgtcccc aatgttacga gcagggtgtc aaatcgattc ttcaattcaa
    22321 tgggtatgaa ggtgcttttc ataaatattc ctgttcccgt tgccaaacca taatattggg
    22381 agagcgttta aagtcagatg ttgaagtatt ttcagtagga ggatcacgtt atgggagatt
    22441 gatagacggc tattaaccaa acttcttctc cacttccgcc ccaaacggct ccaatacctc
    22501 cacaaaggca ggcaaatgtt tgggatgttt ttcttgcaca aacgccatca agaactcaat
    22561 caattccaaa gccgtcgcca gttttgacgt ttccggcatc acacgcgcat tggccgatac
    22621 ggttttcgta aacgcatcgg ccaggctggc caacagcttg gcgcggtcgg acgggggcaa
    22681 atcttcggta ctcgaatcct gcagcatcgt catcgtgctg ttgtactgca ccataaaacc
    22741 ggccaacatc gcacggctca agtcctcaat accgccgccg gccaaagtgt aggcggcgcg
    22801 catcttatcc cagtcgtcgc ctttttcctt atccgcacgt ttccacgcac gcgcagtggt
    22861 ctgcgggatt tcgcacatca aggccgccgt ttccaaagtt tgctcgccgc tcacatagag
    22921 ccgacgtaac ttttcacgga tttcttgcgg gtgagccata attacagtcc cattttcgct
    22981 ttaagcaatt cccagccgac cgtaatcacg ccgccgccca gtgcgccgaa tgtaatggcc
    23041 gtgcgtttcg tgtcttggcg gatttgcgca atttccgcct gcatttcttt ctgatttttc
    23101 agcgtttgat cagtcttgtt ttcaatacgc gccaaggctt ccaaaatcgg gtcgctcatg
    23161 atttgtctgc tttcctgtcc agtttttcgt ttactttttc caacttgttt tcgatgcgtc
    23221 ccaacgaagc cgcaatattg tcgcggtctg ccttggcatc ttgcttggtg tgataagaga
    23281 gcttgaccgc gtgcagctcc tctttcaggt cgtcgatacg cttgtccgct tctttcagac
    23341 ggcctgaaat accgttgacc caaaaccaaa acgccgctgt cgcaatcggc cacagggttc
    23401 tgaaaccaaa ttcaaagtcc atttaaaacc cctttaaacc ggcacatcgc cgaatacgat
    23461 acggacggcg taaccgtcag ggcgattgct ggcaatctcc agtccatcac catcattaca
    23521 aacacagtaa tacgccccca aagtttgcca aaccgcacgt ttaaaggtgt catagttcgt
    23581 aattggatat tcaaggtgaa acgtcgtctg aaaatcctta tccatgcgta ccgcgtactc
    23641 aatgcctgcc ttatccaaca gatcggaaac atgaatgaca aacggctctt gctcgcgtgc
    23701 gcggcttaag cccaattcca aatcggcatg gcgcacagcc aactgacgtt caactaattc
    23761 acggtaggtc attctttgat acccattaaa tattttgtcc gcttgtacaa tttcttaacc
    23821 cacgaaatat ttacaaatgt ataaaccttt gctacaactt cgccgtcata gtgcgcattt
    23881 tctcgtgcag cccgaaattt cgccctggct tcttcagggt tgtccgccca aatgctcaat
    23941 gaccaggact tgccgttaaa gcggtaagaa aacgtgtact cattcatagg agaaacctta
    24001 tgtattttga aatctataaa gacgcaaaag gcgaataccg ttggcgtttg aaagcagcca
    24061 accatgaaat catcgctcag ggcgaaggct acaccagcaa gcaaaactgt cagcacgcag
    24121 tcgatttgct gaaaagcact accgccgcta cccctgtaaa agaggtataa aatccgcttt
    24181 caccctcagc ccgcgcccta cgcgggcttt tttgtcagtt tccgactttg cgggagtgat
    24241 tgcccgccca gtcgcgccaa gcctgatttt gattttccaa ctccgccaca tagccgccaa
    24301 actcggcggc gtgttccaac agcgtggccg tcttgccgtc tttcggcgga tttgggcgta
    24361 ccggcgcgac catcaatgcg gcaggcggtg tcggcatgac cgccttttcg acaaccttaa
    24421 tttccgtagc cgagggcgcg cttgtagagc tgcaagccgt gatggccaaa gccgtcaata
    24481 caaccgccgc ctgcattttt acggtcttga gtaaggacat tttcgatttc ctttttattt
    24541 tccgttttca gacggctgac ttccgcctgt tttttcgcca aagccatgcc gacggcgtgc
    24601 gccttgactt catatttttt cgcttccgcg cgcgcctgtt ccagctcgcg tgcatagttt
    24661 tgagccgaca acagcatggc ttgcgccttg tcgcgcttca ttttctcaat gaccacctgc
    24721 tgcttcgcaa acgccgactt atagccttga tggtgcgaca ccgccaaacc cgtgccgaca
    24781 agcgcgataa tggcaattgg ttgccagtta ttcgctagca gtttcacgag attcattctc
    24841 gacctcctga cgtttgacgc tgaccaacga acgcgccacc gcatagccgc cgacaatgcc
    24901 caaatacacc gcccaaatct ccgccgatgg gtcgggcaac atcacaaatt taaacgtccc
    24961 cgccgcgcag gcgacgtttg cccacagctt cgagtgcgac acattgcctg tcgccgggtt
    25021 tttaaaaata tccaaaatac gcattgctat tccacacttt tggtttgcag gtgccgtttc
    25081 agcatttcct gataattggc cagttcgccc tccgcaaatt caaacgccgc caagtctgcc
    25141 tgttcgcttg cctcacggct tttggccgac cacagcccaa tcatcttttc gtaaaacgca
    25201 acctgtccca tgattaacga cgattcttgc gtttgcgcgc agcccgtttc gcggctgcca
    25261 cgcctgagtt tcttaaattt gggcgtggat aggtgtgtat cggacgaaca tttggcatct
    25321 gtataagtgc gcggtttacc tgctcattac taggattttc tccaatcaat tttgtaagaa
    25381 aataggaagc agcttctttc aatttaccaa taatattcat actcttgccg cccccaattt
    25441 catcgcaatc gcgtccgcaa tcgcgtccgc aatcgcgcgg cagatgcccc atttggtcgt
    25501 cttaaacaag gccaaatcag tgtcgttgct gatgaaaaaa ggctcaacaa tgccgccagc
    25561 ctgcgcataa gccaggcgcg aatgatggcc cgcattgtcg ggtttaaagc cgtcttcgcc
    25621 gcgcagtttc cagccggttt tcttggcaac agctttgctc aacacctgac accagcgttt
    25681 gtttttaacg gtactcaacg cctcaatgcc cgtagctgct ttaccggccg ccgagttggt
    25741 atggaactca atcgccacat ccgagccgcg aatcagtttt acagcttcac gcagcggcat
    25801 attgcctttg cctgtgccgt cggttttaac agtcaaaccg tagtcatcgc gcaaaatagc
    25861 agccacaatg ttgcgcatat cctgcgccaa gtccgcctca cggtcgctgc cgttgaccgc
    25921 acccgggtcg gtgttgctgt gtccagcggt taaggttacg gttttgccca ttcatcatct
    25981 ccaaaaaata ttgatt
//
LOCUS       DAWGBY010000013        25602 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.013, whole genome shotgun sequence.
ACCESSION   DAWGBY010000013 DAWGBY010000000
VERSION     DAWGBY010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25602
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.013"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            63..938
                     /locus_tag="WHG62_000517"
                     /pseudo
     CDS             63..938
                     /locus_tag="WHG62_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981121.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            986..2059
                     /locus_tag="WHG62_000518"
     CDS             986..2059
                     /locus_tag="WHG62_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ1724677.1"
                     /translation="MRPFFVGAAVLAILGALVFFINPGAIVLHRQIFLELMLPAAYGG
                     FLTAALLDWTGFSGNLKPVATLMAALLLAASAILPFSPQTASFFVAAYWLVLLLFCAR
                     LIWLDRNTDNFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSILL
                     GAEALKECRLKDPVFIPNVVYKNIAITFLLLHAAAELWLSAQTAGFTSLAVGFILLAK
                     LRELHHHELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGSV
                     MMVWLTAGLWHSGFTKLDYPKLCRIAVLLLFMAAVSRAFLMNVNPIFFITVPAILTAA
                     VFVLYLLTFVPIFRANAFTDDPE"
     gene            complement(2105..4294)
                     /locus_tag="WHG62_000519"
     CDS             complement(2105..4294)
                     /locus_tag="WHG62_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ1724678.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSVRTAFSDEPLLPESWRDLLSFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPVLRPYHGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVGNRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQSGCPVVLGSATPSLESWHKVQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRVRQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAVEFLNAAKETLVPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESPSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            4433..5215
                     /locus_tag="WHG62_000520"
     CDS             4433..5215
                     /locus_tag="WHG62_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ1724679.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            complement(5488..7422)
                     /locus_tag="WHG62_000521"
     CDS             complement(5488..7422)
                     /locus_tag="WHG62_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ1724680.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(7488..8666)
                     /locus_tag="WHG62_000522"
     CDS             complement(7488..8666)
                     /locus_tag="WHG62_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ1724681.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITEAVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            8892..9278
                     /locus_tag="WHG62_000523"
     CDS             8892..9278
                     /locus_tag="WHG62_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ1724682.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVK
                     STLLMNAQNLERYYRQKGTFDNYDQTKLKQNKYFKITLSKNPDHFTLQAAPDPMTNEG
                     ETCIVTLNDGGTLSAAGSGQDCPDFD"
     gene            9561..10607
                     /gene="adhP"
                     /locus_tag="WHG62_000524"
     CDS             9561..10607
                     /gene="adhP"
                     /locus_tag="WHG62_000524"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ1724683.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVNADYAVKVPDGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(10772..14257)
                     /gene="smc"
                     /locus_tag="WHG62_000525"
     CDS             complement(10772..14257)
                     /gene="smc"
                     /locus_tag="WHG62_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ1724684.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNRQQDLLDYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATGHAAAPQLWQHITAPAEWQHALSVILAERLHARDVPQGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHYWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLAPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIVTLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIAQLEQQTLDWQERQQELALAYETEFQNDEQHIKLEELS
                     EAVQTLDEEYIVVQEKLAQIQEQGREQYAKVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITLLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIYLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            14259..14510
                     /locus_tag="WHG62_000526"
     CDS             14259..14510
                     /locus_tag="WHG62_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724685.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            14507..15229
                     /gene="lpxH"
                     /locus_tag="WHG62_000527"
     CDS             14507..15229
                     /gene="lpxH"
                     /locus_tag="WHG62_000527"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ1724686.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            15498..17084
                     /locus_tag="WHG62_000528"
     CDS             15498..17084
                     /locus_tag="WHG62_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ1724687.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(17252..17455)
                     /locus_tag="WHG62_000529"
     CDS             complement(17252..17455)
                     /locus_tag="WHG62_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ1724688.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            17571..18068
                     /locus_tag="WHG62_000530"
     CDS             17571..18068
                     /locus_tag="WHG62_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ1724689.1"
                     /translation="MTALTLPEDIRQQEPSALLYPLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            18150..19343
                     /locus_tag="WHG62_000531"
     CDS             18150..19343
                     /locus_tag="WHG62_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ1724690.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(19747..20682)
                     /gene="hemC"
                     /locus_tag="WHG62_000532"
     CDS             complement(19747..20682)
                     /gene="hemC"
                     /locus_tag="WHG62_000532"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ1724691.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            20801..21316
                     /gene="ybeY"
                     /locus_tag="WHG62_000533"
     CDS             20801..21316
                     /gene="ybeY"
                     /locus_tag="WHG62_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ1724692.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KSGYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            21318..22142
                     /locus_tag="WHG62_000534"
     CDS             21318..22142
                     /locus_tag="WHG62_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ1724693.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVIIGSLQFTVARADNRRLHTLMATRVK"
     gene            complement(22285..23664)
                     /gene="nhaC"
                     /locus_tag="WHG62_000535"
     CDS             complement(22285..23664)
                     /gene="nhaC"
                     /locus_tag="WHG62_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ1724694.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHCYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(23955..25178)
                     /locus_tag="WHG62_000536"
     CDS             complement(23955..25178)
                     /locus_tag="WHG62_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ1724695.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         5872 a         7301 c         6638 g         5791 t
ORIGIN      
        1 aggattaagg ggatatttgg gtagaattag gcggtatttg gggcgaaaat agacgaaaac
       61 ctgtgtttgg gtttcggctg tcgggaggga aaggaatttt gcaaaggtct caggtcgcac
      121 tcgtcgtgat ggaaagtacc ggaggtctcg aaatccccgc cgccaaagcc atccgccgag
      181 caggcatagc tgtgattatc gccaacccgc gtcagacgca tcagtttgcc caattgcagc
      241 cgctgaccaa aaccgatgcc aaagatgcca aaatgctcgc cttcttcgca cagatgatga
      301 cgcagaaaga aggttcgcaa accatgccct accacccgcc caccgaagtg gaagaagtgt
      361 tggaagcctt ggttaaccgc cgcaaccaac tggtggatat gcggactgcc gagaaaaacc
      421 gtctgcatta ggttcatgaa acgcaagtcg gaagcgtcaa acaactgatt gcccattttg
      481 accggctgat tgacgaattg gacaaacaaa tcgacgacca cacccacacg cattttgacg
      541 gcaaagccca agtggcggag caaatcaaag gcatcggttc gataacgacg gctacgctga
      601 tggcgatgct gcccgaattg gggcggctgt cgcacaaacg gatagcgagt ttggccggca
      661 ttgccccgca cccgagggag agcgaggaaa ccaaattcaa aagccgctgc tttggcggaa
      721 ggtctgcggt gcgtaaggca ctgtatatgg ctaccgtggc agcgacacgt tttgaaccgc
      781 ttattcggga tttctaccaa cgcctgctgt ccaagggtaa gccgtataag gttgccgtta
      841 cggcatgtat gcgcaaactg ctgacgatat cgaatacccg gatgcgtgat tattttgccg
      901 aaaacgatac cgccgaaaac ggtatccgga cggcttgatt tgagttttgg tatttttgcc
      961 cgacggggtg aaaaatacag ttgctatgcg gccgtttttc gtcggcgcgg cggtgcttgc
     1021 catactcggt gcgctggtgt ttttcatcaa ccccggtgcc atcgtcctgc accgccaaat
     1081 tttcttggaa cttatgctgc cggcggcata cggcggtttt ttgactgcgg ctttgttgga
     1141 ctggacgggt ttttcgggta acctgaaacc tgtcgcgact ttgatggcgg cattattgct
     1201 cgccgcatcc gctatactgc ccttttcgcc gcaaactgcc tcgtttttcg tcgccgccta
     1261 ttggctggtg ttgctgctgt tctgcgcccg gctgatttgg ctagaccgaa acaccgacaa
     1321 cttcgccctg ctaatgttac ttgccgcgtt cactgttttt cagacggcat atgccgtcag
     1381 cggcgatttg aacctgttgc gcgcgcaagt gcatctaaat atggcggcgg tgatgttcgt
     1441 atccgtgcgc gtcagtattc ttttgggcgc ggaagccctg aaagaatgcc gtctgaaaga
     1501 cccagtattc atccccaatg tcgtctataa aaacatcgcc attaccttcc tgctcctgca
     1561 cgccgccgcc gaactttggc tgtctgcgca aaccgccggt tttacctcgc tcgccgtcgg
     1621 ctttatcctg cttgccaagc tgcgtgagct tcaccatcac gaactcctgc gcaaacacta
     1681 cgtccgcact tattacctgc tccaactctt tgccgccgca ggctatttgt ggacaggcgc
     1741 ggcgaaatta caaaacctgc ccgcctccgc gcccctgcac ctgattaccc tcggtggcat
     1801 gatgggcagc gtgatgatgg tgtggctgac tgccggactg tggcacagcg gctttaccaa
     1861 gctcgactac ccgaaactct gccgcatcgc cgtcctcctg ctctttatgg ctgccgtctc
     1921 gcgtgctttc ttgatgaacg tgaatccaat attcttcatc accgtccccg cgattctgac
     1981 cgccgccgtg ttcgtgcttt acctgctgac attcgtaccg atctttcggg cgaacgcgtt
     2041 tacagacgat ccggaataaa aatgccgtct gaaacggttt cagacggcat cgtattgccg
     2101 ataatcaagc ctcctgcgga tcgacatcca ccgaccatct gattttgccg tccctgtttt
     2161 gctgcaacac ctgcacccac aaactcacgg cgcggtgcaa atcctgtcgg gacggggatt
     2221 cgaggaagat ttgcgcgcgt tcgcgttcgg cgaggcgcac catcagcatc ggggcggcgc
     2281 cgaactgtga aacgctttcg ggcaacagcg ggaccagggt ttctttggcg gcgttgagaa
     2341 actccaccgc atcggcaacg cgcggcgcgt cggcgcggac ggcggtctgg aaaccgaagg
     2401 gcggcatggc gaacatttgc cgctcattca attcgttttc ggcaaacacg gcataatcct
     2461 gcgctttgac ggcggcgaag acgggatgtt cgggcagttg ggtctgtatc aacaccttgc
     2521 cgggtttgtc ggcgcgcccc gccctgccgg acacctgcat cagctcggcg aacagtcttt
     2581 ccggcgcgcg gaaatccgcg ctgtaaaggc tgccgtcggc gttcaatacg ataacgaggt
     2641 tgagccgcgc aaagtcatgg cctttggcga gcatctgcgt gccgaccaga atgtcgattt
     2701 cgttgtcggc gatgcggcgg tacaaatccg cccagtcgtt tttgtgcgcg gtgctgtccc
     2761 tgtccacgcg gacgacggct gccttgggca ggaaggcgcg cagggtttct tcgacgcgct
     2821 gcgtaccgtg tccgacggcg gtcaggtctt gatttccgca gtcggggcat ttgaacggta
     2881 tgggttcgcg gtggtcgcag tggtggcagc gcagttggcg gacgcgttgg tgcagcacca
     2941 ttttggcgga gcagttcggg cagccgaagg tatggccgca gtcgccgcaa aacagcgcgg
     3001 gcgcgaagcc gcgacggttg aggtacacca gcgacatacc gcccgcttca aaattctgtt
     3061 tcaaaagctg caaggcttgc ggcgagaagc cattgtctag tttcagacgg cctacgttga
     3121 ggatgtccac ttgcggcagt tgcgcagcgg tatgggcgcg ctcggtcagt tgcagcaggc
     3181 ggtacgcgcc gctttgcacc ttgtgccagc tctccaagct gggcgtggcg ctacccagca
     3241 cgacggggca gccgctctgc ttcgcccgcc acaccgccaa atcgcgggcg tggtagcgta
     3301 attcgttgtc ttgtttgaac gagccgtcgt gttcctcatc gactacaatc agcccgacat
     3361 catccatcgg cgtaaacacc gccagccgcg tgccgatgac caatttcgcc tgccccaaca
     3421 tcgcgcgcaa ataatcctgt gtgcgcctgc ctgccgccat ctgactgtgc aacacggcgg
     3481 tcggcacgtc ggcaaaacga tttcccaccc gcttcaaaag ctgcggcgtg aggttgattt
     3541 cgggcaacag aaacaacacc tgccgcccct gagccaacac tttcgccatc gcatcgaaat
     3601 acacttcggt cttgccgctg ccggtgatgc cgtacagcag aaacggctgg aagcgtccca
     3661 atgccgtctg aatggcatcg gaagccttct gctggtcagc atttaataca aattcagagt
     3721 gcgaagcctg cccgtggtac ggccttaaaa cgggcttcgc cgcttccgtc gtttcaatcc
     3781 aaccctgctc cgcccaatct tcgattaact tcgccgcctg cgcgtttacc tgcttcaacg
     3841 ctgccatcgt catttcgccc gacagcagcg cgtcccacaa agccgctttt ttgttgaacc
     3901 gcgccggcgg cggcgtttgc gccctgcccg cttcgttcaa cgcgtaaaac aagggcggct
     3961 gcggcatttc caccgcgcgc gtttccttca aaccttgcgg caatgcggca aatactgcct
     4021 gcccggtcgg atagtggtaa taacgcgacg taaacgagag caaatcacgc cagctttcgg
     4081 gcagcagcgg ctcgtccgaa aaggccgtcc gaacgctcaa aatccgcgcc gtatccatat
     4141 ccggcgcaat atccgtttcc cacaccatcc cgaccacggt tttattgcgg aaaggcacaa
     4201 gcacccgcgt tcccggagga agcggatcgg aatgggaata agtcaaaagg ccgtctgaaa
     4261 gcggcacgtt tacggcgatg cggtggtaga tcatacaggc aggcaaatca tttttttgcg
     4321 tattttaaca ggcggaagct attttcagac gataaattga gcctaggcgc aatgcaggcg
     4381 caacagagat ttgatacaat tccgcttttc caacacgcgc aatcatcttt atatgaaaac
     4441 caagttaatc aaaatcttga ccccctttac cgtcctccca ctgctggctt gcgggcaaac
     4501 gcccgtttcc aatgccaacg ccgaacccgc cgtcaaagcc gagtccgccg gcaaatccgt
     4561 tgccgcctct ttgaaagcgc gtttggaaaa aacctattcc gcccaagatt tgaaagtgtt
     4621 gagcgtcagc gaaacaccgg tcaaaggcat ttacgaagtc gtcgtcagcg gcaggcagat
     4681 tatctacacc gatgccgaag gcggctatat gttcgtcggc gaactcatca acatcgacac
     4741 gcgcaaaaac ctgaccgaag aacgcgccgc cgatttgaac aaaatcgact tcgcctccct
     4801 gcctttggac aaagccatca aagaagtgcg cggcaacggc aagctgaaag tcgccgtctt
     4861 ctccgacccc gattgtccgt tctgcaaacg cttggaacac gagtttgaaa aaatgaccga
     4921 cgtgacggtt tacagcttta tgatgcccat tgccggcctg caccccgatg ccgcgcgcaa
     4981 ggcgcaaatc ttatggtgtc agcccgaccg cgccaaagcg tggacggatt ggatgcgtaa
     5041 aggcaaattc ccggtcggcg gcagcatctg cgacaatccc gtcgcggaaa ccacttcctt
     5101 gggcgaacaa ttcggcttca acggcacgcc gaccctcgtc ttccccaacg ggcgcagcca
     5161 aagcggctac agcccgatgc cccaactgga ggaaatcatc cgcaaaaatc aataatccat
     5221 ccgcaaaaca aaaggcttgg aaaattccaa gccttttttg cgggaaatgc cgcctgaaaa
     5281 ccaatccgcc ctgaaagtta gcaagccaac aaacacatcc taacccattg aatgattgaa
     5341 aataataaat tgaacaatac gaagccccgc cgccgttccc acgcgggcgg gaatctagaa
     5401 cgtagaatct aagaaaccgt tttgtccgat aagtttctgc tccaaaatga ccggtccggc
     5461 agcttcaaac ggcatctttg tccaacctca atcctgtgcc aatgcgtcta tcggattgag
     5521 tttggctgct ttattggcag gcataaagcc gaacgcgatg ccgattccgg tcgagcaggc
     5581 gaccgccccg ataacggatg ccgccgaaat gtccatcggg aagtcggtta caaaatgatt
     5641 gaacacgagg ctgacggcgg cggacaaacc cacgccgacc aaaccgccga tgacgcagat
     5701 taacaccgcc tcaatcaaaa actgctgcaa gatattgccg cgccgcgcgc cgattgccat
     5761 ccgtatgccg atttctttgg tgcgctcggt aacggacacc agcatgatgt tcatcacgcc
     5821 gatgccgccg actaccaatg aaatcagggc gatggaggaa atcagcagct tcatcgtacc
     5881 ggtggtgctt tcgactatct gcctgatgct gtcgctgttg ttcatgaaga aatcttccgt
     5941 gccgtgccgc gctttgagca gatcggtcag ccctttttcg gcaacctggg tattggcatt
     6001 gtctttgatt ttgacggtga tggagttggt gtggctctcg cctgtgattt ggtgcatcac
     6061 cgtcgtatag ggcgaccaaa gcatcagcac gtcggaattg ccgaaagcgt tttcgtcttt
     6121 tttcatcacg ccgatgacgg tcaaggggcg tttcctgaac aaaatggttt tacccaacgg
     6181 atccgagtcc gcaaagagtt tgtctttgac attttggtcg atgacgacga cctgcgcgtc
     6241 ttctttcaca tcgttttcgt caaacagccg ccccgtttcc agcttcagtc cgcgcacgtc
     6301 gaaatattgt tcgcccacgc cgtacaaaga agcggtcagg tcggtattgc ggtaagtcag
     6361 cgtgccgccg ctcgaagtca tgggcgtggc ggaagcaacg tagctttgtt tggcgatgat
     6421 ttttgcgtcg tctatggtca gggttttaat cctgccgctg cgcctgtcgc cgaagccgcg
     6481 ccccgggaag atgctgatgg tgttcgtccc tatcgaactg atgtcttcaa ggattttttt
     6541 ctgcgaacca ttgcccaatg cgacgacgga gacaaccgaa gcgataccga tgatgatgcc
     6601 gagcatcgtc agaagcgaac gcattttgtg cgccaatact gcttgcaccg acattctgaa
     6661 ggcttcgaca aactggtcgt aataaaacga ccacgaggct ttttcctgaa tcctcccgac
     6721 attgcttgcg gggatttcgg gatttttcga ggtgtcggaa atgatttcgc cgtcccggat
     6781 ttcgatgacg cggttggcat tggcggcgat gccggggtcg tgcgtgacca taatgacggt
     6841 atgcccggct tcgtgcagct tatggatgat ttccatcacg tttttgccgc tggcggtatc
     6901 gagcgcgccg gtcggctcgt cggcgaagat gatttctccg ccgttcatca gggcgcgggc
     6961 gatggagacg cgctgctgct gtccgcccga gagttcgccg ggcttgttgc cctctttgct
     7021 tgccaaaccc aaatcctgta acaacttctc cgcccgcgcg gaacgctctt tgccgcccgc
     7081 gcccatatag acggctggca gcgcgacgtt atcccttgcg gtcagcgagc ttaagaggtt
     7141 gtagcgttgg aagatgaaac cgaagcgttc gcggcgcaat gccgccagct cgtcaggctg
     7201 cattttggca gtttcgatgc cgtcgattcg gtacgaaccg gaaccggcgg tatccaaaca
     7261 gccgagtatg ttcatcagcg tggacttgcc cgaaccggac tgcccgatga tggcgacaaa
     7321 atcgcccttc tctatcgaca ggctgatgtc tttcaaaata tggacgcggt tctcgccgct
     7381 gccgaaatag cggttgatgt ttttacattc gatcaagctc ataatattcc gtaaatcaat
     7441 aacaaatgcc gtctgaaacc gtttccgtgt tcagacggca tattcgttta tcggcgcggc
     7501 gggccgccta gggcgcgttc gccgctttcc tgctgctcgg cggcggttat ttcggagatg
     7561 accactttgt ccccctcttt caacccgctt tttacttcgg tattcatact gtctctcata
     7621 ccggtccgga tttcgcgttc cgccgccttg ccgtccgcac ccaacacgcg cacaaacgcc
     7681 ttgccgccgc gatttttcac ggtcagcgac ggaataatca gcacattttt cacgccgtcg
     7741 atttcaaccg tattctgcgt cgtcatcccc gtggcgagtt tgccgtccgg attcggcaca
     7801 aacgaacggg cataataata gaccgcattg gaagccgtat ccgtactgct gttgtagccg
     7861 cccgacgaca tcgtggtcag cccggggtcg acgctgtcga gcttcgcctt aatcggcgta
     7921 tccggttcgg acaaaatcgt aaacgaaata tcctgccccg ccttcacctt ggtaatatcg
     7981 ccctcggcaa tctgcatttt gttcaacatc atatccagat tcgccaattg gacaatcgtc
     8041 ggcgtagact gcgccgcgtt cacagtctgc ccctcttcca cgagaatcgc caccaccgtg
     8101 ccgtccatcg ttgcggtaat gcgcgtgtag cccaattccg actcggcggt attgatggaa
     8161 attttgctct gtctgattaa agccttcagc tcggcaacat tggctttggc ggcggcaaac
     8221 gcatcctgcg cgctttccaa atcctctttg gaagtcgcgt tttccttcca taacgccgcc
     8281 tgacgcttat atttcttctc cgcactgccc aatgcaatct gtgccgacac cagcttcgcc
     8341 tgatacgttt ccaacttgga tttttccgta ttgagcgtat tggtctgcga ggtcgaattg
     8401 atttccgcaa tcaaatcgcc ctttttaacc tgttgcccga gtttgacata aagtttctta
     8461 atctgccccg atgcctgcgc gccgaccgat accaggttgg acggcgaaat ctcccctgtt
     8521 gcagaaaccg tccggctgat gtcgccgcgc ctgaccgctt ccgtaatata agcagcctgc
     8581 ggttcgggct tcagataaga ccatccgccc caaaccgctg ccgccgcgac cgccgcaaca
     8641 gccgcccatt tcatcatttt tgccatgttt tcaattctct gtatgcgtca atcccataaa
     8701 tcggaagcag attctaccgc aagtccctgc cccatccaag gcggcaaact gccgacaata
     8761 aaaataacca tttgttttaa atggcttata caatctgctt tcccgaaaat ttcaatccgt
     8821 ttacatattc cgccatttcc gatacggcgt tataatgtcg ccgaccgaca aacaaatgga
     8881 aacacattgc tatgaaaaac gttcaaaaag gctttacgct gctcgagctg atgattgccg
     8941 tcgccatcct cggcatcctg acgctcatca cctacccttc ctataaaacc tacatccggc
     9001 gcgtccgcct gtcggaagtc aaatccaccc tgctgatgaa cgcgcaaaac ttggagcgtt
     9061 actaccgcca aaaagggacg tttgacaact acgaccaaac caaactgaaa caaaacaaat
     9121 atttcaagat taccttaagc aaaaaccccg accacttcac ccttcaggca gcccccgatc
     9181 cgatgaccaa cgaaggcgaa acctgcatcg ttacgctcaa cgacggcggc acactgtccg
     9241 ccgccggcag cgggcaggac tgcccggact tcgactaatc ctccgccgaa gcccgcaaac
     9301 ccgtaaagat gccgtccgga cacagcttca gacggcattt ttacgggttt gccgtccggt
     9361 ttttcaaact tgaaacctgc cgcccctcat ccggcaaccg ccccgatgcc gtgcctttcc
     9421 aagatgttat aatataacat ataatctata tttttcaaca acataccact tgacctgtga
     9481 gatgcggaag cgtatgctta cccttatatc ggacaacatt ccgtttacag gtttttttgc
     9541 cgtaactaag gagcgcaatc atgaaaatgc aggcagttgt tgtgaataaa aatgtagcgg
     9601 gcgatgtgga aatagtcgaa cgcgaggttc gcccgttgga atacggcgag gcgttggtcg
     9661 aagtcgaata ttgcggcgtg tgccacaccg acctgcacgt tgcggcaggc gactacggcg
     9721 aaaaaccggg ccgcgtgctg ggacacgagg gcatcggttt ggttaaagaa gttgccgacg
     9781 gtgtgaaaaa tctgaaagtc ggcgaccgcg tcagcatcgc ctggctgttc caaagctgcg
     9841 gctcttgcga atactgcaat accggccgcg aaaccctgtg ccgctctgta ttgaacgcgg
     9901 gctacaccgc cgacggcggt atggcgaccc actgcatcgt caatgcggat tatgcggtca
     9961 aagtccccga cggtctcgac cccgcccaag cgtccagcat cacttgtgcc ggcgtgacca
    10021 cttataaagc cattaaagtt tccagtgttc gtccgggaca gtggattgcc atctacggcg
    10081 cgggcggttt gggcaacttg ggggtccaat acgcgaaaaa agtattcggc gcgcacgttg
    10141 tcgccatcga catcaacgac gacaaactgg cgtttgccaa agaaaccggc gcggatttgg
    10201 ttgtcaacgc cgccaaagag gacgctgcca aagtgattca ggaaaaaaca ggcggcgcac
    10261 acgctgcggt cgtaaccgcc gtatctgctg ccgcattcaa ctctgccgtg aattgcgtcc
    10321 gcgcgggcgg acgtgtggtt gccatcgggc tgccgccgga atcgatggat ttgtccatcc
    10381 cgcgtttggt tttggacggc atcgaagtgg tcggctcttt ggtcggcacg cgcaaagatt
    10441 tggaagaagc cttccaattc ggcgcggaag gtttggttgt tccgaaagtc caactgcgtg
    10501 ctttggatga agcacccgcc attttccaag aaatgcgcga aggcaaaatc accggtcgta
    10561 tggtgatcga tatgaaaaaa gaatgcggct gcggccatca ccactgattt gacgtggcag
    10621 tacacatcga aatgccgtct gaacgctgtt cagacggcat tttttatgga tttggatttg
    10681 attttaatct gttctgtttg aaataccgtc tgaaaaccct tatcgcaaca cgtcattaaa
    10741 aacggcaaga ttcagccgtt ctgcaacccg ttcaaacggc ttccgccatt tccaacgcct
    10801 gcttgatgtc cacggcgacg acgcgcgata cgcctttttc ctgcatggtt acaccgacca
    10861 gctgttccgc catttccatg gtcaggcggt tgtgtgagat gtagaggaat tgggtttgcg
    10921 ccgacatttc tttgaccaaa ttgcagaagc gcgaggtgtt ggcatcgtcc agcggggcat
    10981 cgacttcgtc caaaaggcag aacggagcag ggttgaggct gaacagggcg aacacgaggc
    11041 tcatggcggt gagggctttt tcgccgccgg aaaggaggta gatggtgctg tttttcttgc
    11101 cgggcgggcg cgccatgatg gacacgccgg cggtcaggag gtcgtcgcct atcattttga
    11161 gggtagcttc gccaccgccg aacagggtcg ggaagaaagt ttggactttg ccgttgacgg
    11221 catcgaaggt ttctttgaaa cgcgctttgg ttttgtcgtc gatttgggcg atggcttctt
    11281 ccaaaagggt gatggctgcc tgcacgtctt cgctttggct gcggtagtag ccgtcgcgtt
    11341 cgcgcgcttc ttcgagttct tgcagggcgg cgaggttaac cgcgccgagt gcttcgattt
    11401 gttgcgaaag gctgccgatg ctgctgttca atactttcgg cgattctttc gccaacgctt
    11461 cgagcgcgtc caaatcggcg gcgcgttcgg tcaggttttg atggtagcgt ttggcgttga
    11521 tcagggcttc ctgctgctgc aacaaggcgg tttgggtggc ggcctgaagc tgcggcagct
    11581 tggtttgcag ggtttgcact ttagcgtatt gctccctgcc ctgttcctga atctgcgcga
    11641 gtttctcttg cacaacaata tattcttcgt ccaaggtctg tacggcttcg cttaattctt
    11701 caagcttgat gtgctgctcg tcgttttgga actcggtttc ataggcgagg gcaagctctt
    11761 gctggcgttc ctgccagtct agggtttgct gttcgagctg ggcaatttgc tgccggtagt
    11821 tttgtttttg ctggttgagc ttgtgaacgg cgacttcggc cagcccgtat tggcggttgg
    11881 cttccaacag ggcaagctgc gcctgtttca gacggccttg ctgctcttgg cggctgtgcg
    11941 cggtggtttg ctgctggtgt tcgagttcgg cggcggcttc ctgcaaggta acgatgtcgt
    12001 ctgaaagccc gtcggacgtg tgttgcaaca cggtctgctc ttccgccaac tgcgccagtt
    12061 cgcgctcgat gtgttcgcgg cggatttgcc cttggttggt gcgcgccaga agttcggcgg
    12121 cgcgttgctg cgcctgactg tattggcgtg tgtgctgctg ttgctgctgc atcaggtttt
    12181 tgtgctgcac ttcggacgag cgcacggcgg cttccgcctg tttgaacgcg gcttcggcgg
    12241 cggagagttc gggggcgagg ttttccagtt cggacgcgat gccgtcgagg cgcgcttttt
    12301 gggcaatcag gctttcctgc gcgggcttgg catagagcag gacgctgact ttgtcgacct
    12361 gatgaccttc gggcgtgagc cagatttggt gtgcgcccaa atcgttttga tgcgcgaggg
    12421 catagctcaa atcgggcgcg cacaatacgc cgtcgagcca gtagtgcaat gccgtctgaa
    12481 acggcggctg cgcttggatt tggttcagca atgcctgtac gggcagggat tttttgatgc
    12541 cgccggagag gccgtctgaa agccacgccg cctgcccttg cggcaaaggt tcgggcggta
    12601 cgaaaccttg cggcacgtcg cgggcgtgca ggcgttcggc aaggatgacg gacagggcgt
    12661 gctgccactc agcaggcgcg gtaatgtgtt gccacagttg cggcgcggcg gcgtggccgg
    12721 ttgcctgcca gaaatcggct gcttcctgct gttgcgacag gatttgcgac aacgcctgct
    12781 gctgcgcctg caaggtgata tgttgctgct tcaggctttg gaagcggttt gaggccgtct
    12841 gaaacgcctc gcgggcggcg tgtaaggctt cttcggcggc gatgatttgt tcttcgtaat
    12901 gctcttgccg gctttgcaac aaggcagcgg cctcctgcgc ggcggcggtt tccgcttcgt
    12961 cgggcaggtt cagggcttgg ttctcctgtt tcagacggcc tttgcgctct tcgtgcttgg
    13021 caacggtttg ttcggcatgg gcaagctgct gctgcttcaa cgccagttcg cggcggatgc
    13081 ggtttgcctc gtcctgctgg gtttggaagg cggcattgag cgcggtttgg gtttcttcca
    13141 attcgggcag acgctcttcg tgttcggcaa cctgcatcgc ccactccgcc agctcggttt
    13201 gcttttcttc gacgtataac tcgttttctt caagctgcac gcggatttgc tgctgctctt
    13261 gatgaatacg ctgcatctgc gcctgcgccg cctgcttgtc gcgttcgatg cgttggtgca
    13321 ggttttgctg atggcggatt tgttcttcca aacgggcaat ctgctcgcgc aacacgccgc
    13381 gtttgttgct caattcatgc accgcctgtt gctgcgactg ttcggcggtc tgcaaggcgt
    13441 gtacttcgtc gtttaacgcc tgaacctgcg cggcggtttc gtcctgctgc gcctgcaaag
    13501 actgatgctg ctcggtcgcc ttgtcggcgg cggcaagcga ttgctgccat tgggcgtaat
    13561 cgagcaaatc ctgttgccgg ttcaactgcg cggtcaggga tttgtagcgt tcggcggttt
    13621 ccgcctgttt ctccagcttt tccacctgac gcgccaattc gttctgcaaa tcgcccaaac
    13681 gctgcaaatg ctcgcgcgtg tctttcagac ggccttccgt ctccttgcgg cgttccttat
    13741 atttggacac acccgccgcc tcctcgatat aagcgcgcaa ctcctccggc cgcgcttcga
    13801 tgatgcgcga aatcatcccc tgctcgataa cggcataacc gcgcgcgccc acgcccgtac
    13861 ccagaaacaa atcagtaata tcgcggcggc gcacggtctg attgttgatg aaataagtcg
    13921 attcgccctg ccgcgtcagc tgccgcttga tgctcacctc ggcatactgc ccccacgcgc
    13981 cctgcaaact gtggtcgctg ttgtcaaaca ccagctccac cgaagctctt ggcgcaggac
    14041 ggcgcgttgc cgcaccgtta aaaatcacgt cctgcatact ctcgccgcga agctgcttcg
    14101 ccgaagcctc gcccaacacc cagcgcaccg cgtcaatcac attcgacttg ccgcagccgt
    14161 tgggcccgat aaccgcgaca agctgccccg gcacatgaat tgtggtcggg tcggtaaaag
    14221 atttgaagcc ggagagtttg atatgggtca ggcgcataat ggtcggaaaa aataaaaaag
    14281 aagcgtattt taacggaaat cccgccgcac caccccatat cttgccggca aaaccttacc
    14341 gcatcccgca ccctcgatgc cgtctgaagc cttcagacgg catttttaac gcgcccgaac
    14401 cccgattccg ccaacgcccg atgcttggcg cggcatttgc cgtattgccc cgccgccggg
    14461 cgcgttataa tccgccacga catccgcccg atttggaaac ctgcctatga aacccgccta
    14521 tttcatctcc gacctgcatt tgagcgaaaa gcaccccgaa ctgaccgcgc tgttgctgcg
    14581 ttttttacgt tcttccgccg ccgggcaggc gcgggcggtt tacattttgg gcgatttgtt
    14641 tgatttttgg gtgggcgatg acgaagtttc cgagttgaat acttcggttg cgcgtgaaat
    14701 caggaaattg tccgacaaag gcgttgccgt gttcttcgtc aggggcaacc gcgacttcct
    14761 gattggtcag gatttttgcc ggcaggcagg catgacgctg ctgccggatt actcggtttt
    14821 ggacttgttc ggctgcaaaa ccctcatctg ccacggcgac actctgtgta cggatgacag
    14881 ggcataccaa cgtttccgca aaatcgtgca tcggaagcgg ctgcaaaaac tgttcctgat
    14941 gctgcccctg aagtggcgca cgcgccttgc cgccaaaatc aggcgcgtca gcaaaatgga
    15001 aaaacaggtc aagcccgccg atattatgga tgtcaatgcc gcctttaccg cgcggcaggt
    15061 tcgcgccttt aacgcggaaa ggctgataca cggacacacc caccgcgagc atatccatca
    15121 cgaaaacggc tttacccgca tcgttttggg cgactggcat aacgactatg cttcaatcct
    15181 ccgcgtggac ggggacggcg cggtattcgt gccgctggaa aaatgctgaa aatgccgtct
    15241 gaagcctttc gggcggcttt ttttacacgc ccctttccca cactccctcc gccgcatcat
    15301 caccatcctt aacccgcatt aatgggcgtt atcgataaaa tgcttgaccg attacataag
    15361 attacgtaaa gtgtgcaaac gcataacaat tggtcttacc aatttatctt ttaaccaaaa
    15421 tatcgggtgt acgggatttg aacgtctttc caaacctcga cgcgccttat gatgcaaatg
    15481 cctaaaaagg attcgttatg gcacttttcc tcagcatatt ccccatcgtc ctgctgattt
    15541 ggctgatggt gaaaaaaaac agtatgccct cctacgtcgc gctgccgatt accgcagtgc
    15601 tgatttacgc catcaaactt ttctacttcg gcgatgcggg catgctgctc aacgccaccg
    15661 ccgcttccgg cctcgtcaaa acgctcacgc cgattaccgt gattttcggc gcgattatgt
    15721 tcaaccgtat gatggaaacc acgggctgca ttgatgtcat ccgcaaatgg ctggcgacca
    15781 tcagccccaa ccccgtagcg caactgatga ttatcggctg ggcttttgcc tttatgattg
    15841 aaggcgcatc cggcttcggc acgcctgccg cgattgccgc gccgattctg atgagcttgg
    15901 gcttcaaccc gttgaaagtg gcgattttca ctttggtgat gaactccgtc cccgtctctt
    15961 tcggcgcggt cggtacgccg acctggttcg gtttcgcacc gctgaacctg agtgccgaag
    16021 acatcctcgc catcggcagg cagaccggcg taatgcactt cttcgcaggt ttcgtcatcc
    16081 ccgtcatcgg cttgggcttc atcgtacctt ggtctgaaat ccgcaaaaac ttgggcttcg
    16141 tcgccattgc cgtcttctcc tgcaccattc cttatgtcgc attggcgatg gtcaacgaag
    16201 aattcccgtc gctcgtcgcc ggcgcaatcg gcctgatggt gtccgtattc gccgccaacc
    16261 aaggctgggg cttgagcaaa gaccacgcca aagacccgaa tgccgaaaaa gtgccgttcg
    16321 cccaagtcgc caaagcactc gcccctttgg gtatgctgat cggcatgctg gtggttacgc
    16381 gcatcaaaca gctcggcatc aaaggcattt tgaccagcaa agaagaatgg ttcagcttcc
    16441 aactgccgtt tgatttgtcc aaaatcaccg tcagcgactc cctgacgatt accttcggca
    16501 atattttcgg acaagatgtc agcgcgtctt accaaacgct gtacgtcccg gcttggattc
    16561 cgtttgtgct gaccgtttgg atttgcatcc tgctgtataa aaccaaattc aaagatgcct
    16621 ggacgattta ttccgtaact ttcaatcaaa ccaaaaaacc gctgcttgcc ctgatgggcg
    16681 cgctgattat ggttcagctg atgctggtcg gcggcgacaa ttcgatggtg aaaatcatcg
    16741 gtaaggaatt tgccgcaatg gcgggcgaac actgggttta tttctcgccg tatctgggcg
    16801 cgatcggtgc gttcttctcc ggctccaaca ccgtgtccaa cctgactttc ggcccgattc
    16861 agcagcaaat cgccttggat accggcctgt ccgttaccct gattctggcg ttgcagtccg
    16921 tcggcggcgc gatgggcaat atggtgtgcc tcaacaacat catcgccgta tgtaccgtat
    16981 tggatgtgaa aaattccgaa ggtgcgatta tcaagaaaac cgttatcccg atggcgattt
    17041 acggcgtgat tgccgtcgtc gcggcaatga ttttcttcct ctaggcgaaa cgccaccatc
    17101 catagcggca gcacgcgggg aacggaaacc gccgttcccc gtctgggcgg cgcgtcgggc
    17161 agaatcccgg tgccggaaca gcccgccccg ccaaacaaat gccgtctgaa accggaaaag
    17221 gcttcagacg gcatttttcc gccgtttgca ttcaggcgta atgatgatgc ggcatcttgc
    17281 cgtcaaggcg gtagcgcgtg ccgcaatacg ggcaggcaac gctgcccgat tctccttcgc
    17341 acaaaggcaa aaacactctc ggatgcccgt tccactgctc gttgtcgggt cccgagcaat
    17401 acagcggcag attttccggc aacacggaaa tttcctgcag attcagattg tccatttgat
    17461 tttcctttgc gtggttggcg tgcgcccatt ttacgccatc ggcaggctaa aggatatttt
    17521 cggcgcaaag ccgcaatccg ctataatccc cacttttcag acggcatacc atgactgcgc
    17581 ttacccttcc ggaagacatc cgccaacaag agccatccgc cctgctctat cccctcgttt
    17641 ccgcctacct cgaacacacc gcccaaaccg gcgacgaatc cctctcctgc ctgtccgacg
    17701 accagcacac gctgaccgca ttctgctacc tcgacagcca agtcgaagaa ggcggcttcg
    17761 tgcaactcat cgcctccggt tacggcgaat atattttccg caacccgctt gccgacagcc
    17821 tgcgccgctg gaaaatcaaa gccgtgccga aagtcttgga caaagccaaa gccctctacg
    17881 aacaacacgg caaaaccatc gaaacgctcg ccgacggagg cgcagacatc gaatccctgc
    17941 gcaaacagtt ccccgacttt gaagaatggg acggcgcata ctacgaagcc gccgaacaag
    18001 acctgcccct gcttgcagaa cacatacagt caaactggga aaccttcgcc catatcgggc
    18061 aggcgtgatt gcgtctgttt ccagcccgtg taaaacagcg taaaatcggc aaacccgaat
    18121 gaccttccgt ccccatcaag gagcaagcta tgttcttcaa gcacatcgaa gccgcccccg
    18181 ccgatccgat tctcggttta ggcgaagcgt tcaaagccga aacccgcccc gaaaaagtca
    18241 acctcggcat cggcgtttat aaagacgcat ccggcgcgac acccctcgtc aaagccgtca
    18301 aagaagccga aaaacgcctg ttggaaagcg aaaccaccaa aaactacctc accatcgacg
    18361 gcgttgccga ctacaacgcg caaacccaaa tcctgctgtt cggcaaagac cacgaaatca
    18421 tcgccagccg tcgcgccaaa acagcgcaaa gcctcggcgg tacgggcgca ttgcgtattg
    18481 cggccgagtt tgccaaacgc cagttgaacg cgcaaaccat ctggatttcc aatccgactt
    18541 ggcccaacca caacgccatc gccaaagcgg tcggtatcca agacaaacct tatcgttact
    18601 atgatgccgc caaacacggt ttggattggg acggcatgat tgaggacttg agccaagcgc
    18661 aaaaaggcga catcgtcctg ctgcacggct gctgccacaa tcctaccggc atcgacccta
    18721 cgcccgaaca atgggaaact ttggcaaaac tttctgccga aaaaggctgg ttgccgctgt
    18781 ttgactttgc ctaccaaggc ttcggcaatg gtttggaaga agatgcctac ggcttgcgcg
    18841 tgttcttgaa acacaataca gaattgctga ttgccagctc ttattccaaa aacttcggta
    18901 tgtacaacga gcgcgtcggc gcgttcactt tggtggccga agatgaagaa acagcagccc
    18961 gcgcccacag ccaagtcaaa accatcatcc gtaccttgta ttccaacccg gcttcacacg
    19021 gtgcgaacac cattgcgctg gtgttgaaaa atgatgattt gaaagcacaa tggattgccg
    19081 aactcgatga aatgcgcggc cgcatcaaag ccatgcgcca aaaatttgtc gagttgctca
    19141 aagccaaagg tgcaagccaa gactttgatt tcattatcga acaaaacggt atgttctctt
    19201 tcagcggtct gacccccgaa caagttgacc gtttgaaaaa cgagtttgcc atttatgccg
    19261 tccgctccgg ccgcatcaac gtcgccggca ttaccgacga caacatcgat tatctgtgcg
    19321 aaagcatcgt gaaagtcttg taaaacaaaa gcgcatacga aatgccgtct gaaccttaac
    19381 cagttcagac ggcatctgtt ttttgttaaa aaacaataaa ccataacaat ttcaaacaag
    19441 ctaaaaaaca tctataaaat caacccaata tgatgaactc aaataaaaaa tacgaatatc
    19501 atcattctca aattcaaaat ttgaacgcca cagtattatc cgaagccaca aaaacctttc
    19561 cgccgtcatt cccgcgcagg cgggaatccg ggaacccaat gctgcaagaa ttgattagaa
    19621 acaactgaaa ccgagcaaac tggattcccg cctgcgcggg aatgacgaaa taaggcgagt
    19681 aaaactgatg aaacaaattg attaaaaaca ataacttata ttattttatt taaattttcg
    19741 ataaaatcaa ttttccgtat tcaatactgc tccaatcaat tcccgcgcac cgtcgtccgc
    19801 caatttctta gcgacagcgc gtccgagcgc gtcggcatat tcggcagggg cttgcgcgtc
    19861 cgcccgcaac acaaccgaac cgtcgggatg accgaccaag ccgcgcaagg tcagcaagcc
    19921 gttttcttcc gtgcaatatg ccgccagcgg cacttggcag cttccgccca aagcgcgcgc
    19981 caacgcgcgt tcagccgtaa cgcaggcgtg tgtggtatcg tggttcaacg gctttaagac
    20041 ttcatacaaa tcttcgcgat gcgctgcaat ttcaataccc aatgcacctt gtccggcggc
    20101 aggcagactg tcagattccg acaaaatcat gcggatgcgt tcgtccaatt ccagacgctg
    20161 caaaccggcg gcggcaagga taattgcgtc gtattcgccg ttatcgagtt tggacaaacg
    20221 ggtttgcaca ttgccgcgca aaggtttgat aaccaaatgc ggatagcgcg cacgcaactg
    20281 ggcttcgcgg cgcaggctgg atgtaccgac gacagcgcct ttgggcattt cttccaaacg
    20341 cgcgtattgg ttggacacaa acgcgtcaaa cggattggcg cgttcgccga tggcggcaag
    20401 cgcgaaacct tcaggcaaat ccatcggcac gtccttaatc gaatgcaccg ccaaatcggc
    20461 gcgcccgtca tataaagcct gttccaactc tttgacaaac aagcctttac cgccgacttt
    20521 tgacaaagtt ttgtccaaaa tctgatcgcc gcgcgtggtc atgcccaaaa tctcgacttc
    20581 gcaatcggga tacagagcct tcagacggcc ttggatatgc tttgcctgcc acatagcaag
    20641 caggctttcg cggctggcga tgacgagttt tttcgggttc atgttcaatg cgttcaaaga
    20701 atggaaacgg cgtgaagtct atcatatttt gaacgtttct tcagacggca ccgtcaggtc
    20761 tatgttatat ttacacccac aaaacacgaa acccgccaca atgaaacgca ccaaaaaata
    20821 ccctttctta acgttgcagc ggcaacgttt ccatttgaac tttgaaaacg cctcttccgc
    20881 cgccggcatc ccagccgaac gcgatttcta ccgctgggcg tggtctgcct tgaaaagcgg
    20941 ataccgccgc gccgacatca gcctgattct tctggacgaa gaagaagccc gagcctacaa
    21001 ccgcgactac cgcggcaaag attacgccac caatgtattg agtttcgcgc tcaacgaagg
    21061 cgaaatcctg ccctgccaag tttcggaaaa actgtacggc gatttgatta tctgcccgca
    21121 agtggttttg aaagaagccg ccgaacaggg caaaacgccc gaacggcatt ttgcccacct
    21181 gaccatacac ggcgttttgc acctgatggg ctacgaccac atcgaagacg atgaagccga
    21241 aataatggaa gccgaagaaa tccgcctgat gctggcggca ggcttcccca acccctacca
    21301 agaggacgaa tattaaaatg gacggtacgc agtcgaaacc caagtttttc gaacgcctga
    21361 tctcccgact tgccggcgag cccgactccg ccgaagacgt attgaccctg ctgcgccaag
    21421 cgcacgagca ggaagttttt gatgcggata cgcttttaag gttggaaaaa gtcctcgatt
    21481 tttccgattt ggaagtgcgc gatgccatga ttacgcgcag ccgtatgaac gttttaaaag
    21541 aaaacgacag catcgaacgc atcaccgcct acgttatcga taccgcccat tcgcgcttcc
    21601 ccgtcatcgg tgaagacaaa gacgaagttt tgggtatttt gcacgccaaa gacctgctca
    21661 aatatatgtt caaccccgag cagttccacc tcaaatcgat attgcgccct gccgtcttcg
    21721 tccccgaagg caaatcgctg accgcccttt taaaagagtt ccgcgaacag cgcaaccata
    21781 tggcgatcgt catcgacgaa tacggcggca cgtcgggttt ggtaactttt gaagacatca
    21841 tcgagcaaat cgtcggcgac atcgaagatg agtttgacga agacgaaagc gcggacaaca
    21901 tccacgccgt ttcttccgaa cgctggcgca tccacgcggc taccgaaatc gaagacatca
    21961 acaccttctt cggtacggaa tacagcagcg aagaagccga caccattggc ggcctggtca
    22021 ttcaagagtt gggacatctg cccgtgcgcg gcgaaaaagt cattatcggc agcctgcaat
    22081 ttaccgtcgc acgcgccgac aaccgccgcc tgcatacgct gatggcgacc cgcgtgaagt
    22141 aagcagagcc tgcccgcacc gccgtttctg cacagtttag gatgacggta cggacgtttt
    22201 ctgtttcaat cctccccatc cgccaaacat aaaaatgccg tctgaaaccg gaaaacaggt
    22261 tcagacggca tttcgcttat ccgcttattt tttgctcaaa gtcagccccg tccagccgaa
    22321 taacagggtt aaagccaaac tcaaatagca gaaaaaggca tagggcagat attcccagac
    22381 cggcacaccc agcgcatggc tgataaatac gccgcacacg ctccacggaa caagcgggtt
    22441 gatgaccgta cccgcgtctt cgagcgtacg cgagaggttg cgggaatgta gtccgagctt
    22501 atcgtaaacg ggtttgaacg tttcacccga caacaaaata ctcaaatatt gctcgccgat
    22561 caggaaatta accccgaccg aagtcatggc aacgctgaat gtggcacgtc cggcattcgt
    22621 caaaaagctg cggacggcat ccagcaggga aggaatcgcg cccagcgcaa acagcagccc
    22681 gcccaaactc atcccgagaa tcacgatggt ttgcgtgaaa aacatacttt ccaagccgcc
    22741 gcgcgaaatg agtttggcga tgtctttaaa cgcttcgcct tcgagtttgt agccgccgta
    22801 aaaccacgcg ccgagctgac gcagatcggg cgtgctgtgc agatacgtta cggcaacggc
    22861 ggcaatgacg gtaaagagca tagcgaccac ggcattgacg cgcatcaatg ccaaaacgac
    22921 caacagcgca aacggaatca gcgaatagca gtgcaccaat cccgtggctt caagctggct
    22981 gcggaaggat tcgacgctgt tcaaatcctg cgcggcgacg ctgggaagaa gccacagcat
    23041 cagtgccgca ctgatgagcc acgcgggaat ggtggtgtac atcatatttt tgatgtgttc
    23101 aaacaggtcg ataccgacaa tggacgcgga aatgcccgtc gtatcggaaa gcggggacat
    23161 tttgtcgcca aaaaatgcgc ccgaaacaat cgcgcccgcc gtcatcgcca tatcggcctg
    23221 aaacgccgcc gccataccca taaaggcaac gccgacagtg gcgcaggtgg tcaggctgct
    23281 gccgatggac acgccgatga cggaacacag cgcgaaggcg gaaaaataaa aataagtcgg
    23341 ggaaatcagt ccgaaaccgt aatacatcag cgtcggaatc gcgccgctca tcatcagcgc
    23401 gctgaccatc agcccgatga agaaaaacag gtaaatcgcg cccataccct gattcaacgc
    23461 gcctatcatg ccctgctgca tatcgttgta tttcaaaccg cgcgccaagc cgtacaaaat
    23521 cagcacgacg atggcggcaa taatggacat atgcggcagc cactccaatg aaatgatggt
    23581 atagcccatc gcagcaatca gagcgacgac gacggcaagt gcctcaccgc gcggcatatc
    23641 gagtaaggat ttgaaagcga acatgattct ttgcccgatt tgatataaag ttaacggatt
    23701 ctaacacacc ataccgaatc cgcccgacgt tttcagacgg cattttagcg ttttacaaaa
    23761 gccggacaga aacaaaacgg caattttctc aatttaaatt aatttttttg aaatataatt
    23821 ttttattttt ttgtttgttg acatataaga cttttatgga ttgaagtatt aaaacctcgg
    23881 cacacacgcc gcaaacaccg gtacgcaaaa atgccgtctg aaagatgttc agacgacatt
    23941 tctcaagaaa aagattattt gtccgcccta tatccgtaca ccgcaaaaaa cacgatatac
    24001 agataacaga tgacggaaac gacaaacgaa gacatcaggg tgtaagtatc tgccacccag
    24061 ccctgcacga caggaacgac cgcaccgccg acaatcgcgg tacacagtac accggaagcc
    24121 gcgttggtaa attttcccaa tcctttggtt gccaaagaga aaatcgtcgg gaacataatc
    24181 gagttgaaaa aaccgatggc aagcagcgac cacatcgcca catccgcatt gccgctaccc
    24241 gtcgccatcg cgacggcaag cagtacgacc gcagccgatg cgttaaacgc caaataacgg
    24301 ttgggcgcga atttcgccat caccgccgaa ccgaggaaac gtccgaccat cgcgccgccc
    24361 caatagaacg acaggtaatg cgcggcagaa gcatgatcca gccctttcag ataacccaat
    24421 acgttgacca tcaacgaacc gatagacacc tccgcgccga catagcagaa aatgcctgcc
    24481 gtaccgaaca cgagatgttt gtattgccat acgctggttt tgccgtcgtg gttgtgcgcg
    24541 ctttcctcgg cggcaatttt gcgcgcgtcg ggcagccgga tcattttcac gaaaacggca
    24601 aggataatca gcagccccgc cagtcccaaa tagggaatct gtacggaaga aatctgttcc
    24661 gccttgctga cggtttgggt tgcgtccgcc agaatcagga acgcgccgat ttgcggcgca
    24721 atggtcgtac ccaaagcgtt aaacgcctga accagcgtca gtgttgccga ttccttgccg
    24781 ggtttcgcca gcagggtaac ataaggatta ccggcgacct gaagcagcgt tacgccggaa
    24841 gccaaaataa acaacgcgcc caaaaatacc gcgtaagaat ggctacccgc agcaggataa
    24901 aacagcaggc atccgaccgc cgtcagcaga aagccgccga taacgccgtt tttgtagccg
    24961 actttgccga caaaagcccc catcgggatg gacatcaccg cataggcggt aaagaaacag
    25021 aattggatca gcatcgcctg aacgtaagac aggtcgaaaa tttctttcaa atgagggata
    25081 aggatgtcgt tcatgcaggt aataaaaccc atcatgaaga acagcgtggt caagacgacc
    25141 aatggggacg tatgattgtt ttgtgattgc gcagacatga tttgcctttc gtggtgtcgg
    25201 aatattaccc gtttcaagaa aatagaaatt gacatttctt aacggcaatg caaatcatac
    25261 tgatatttga acattttgca aactttatcg gatgcaggca atgcgccgat ctgaaattca
    25321 agcagcagaa attaatattt tacagttgct tgcatagatt ttaatagatt ttaaaaaatt
    25381 ccggcggact tgcaaaaacc gttcccaata aaatgaaaat ccgccgccgt atccggaaaa
    25441 ttcggaaatg ccgcatcgtg gcatcaaaac cggagcggaa agaatgtcgt atgcccgaca
    25501 aaaaaggggc atacggctgt gccgtatttt ttgcaccgtc ctccgccctt cggcgggggc
    25561 gtgaaaatat agtggattaa caaaaatcag gacaaggcga cg
//
LOCUS       DAWGBY010000014        25509 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.014, whole genome shotgun sequence.
ACCESSION   DAWGBY010000014 DAWGBY010000000
VERSION     DAWGBY010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25509
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.014"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            200..1876
                     /gene="ettA"
                     /locus_tag="WHG62_000537"
     CDS             200..1876
                     /gene="ettA"
                     /locus_tag="WHG62_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ1724696.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMISGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIAGQLSG
                     GERGRLHLAKTLLSGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
     gene            1920..2027
                     /locus_tag="WHG62_000538"
                     /pseudo
     CDS             1920..2027
                     /locus_tag="WHG62_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(2041..2526)
                     /locus_tag="WHG62_000539"
     CDS             complement(2041..2526)
                     /locus_tag="WHG62_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ1724697.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILAGVDGWLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPPPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(2519..3475)
                     /gene="thiL"
                     /locus_tag="WHG62_000540"
     CDS             complement(2519..3475)
                     /gene="thiL"
                     /locus_tag="WHG62_000540"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ1724698.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLRDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGITLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTASESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            complement(4338..5066)
                     /gene="rmpM"
                     /locus_tag="WHG62_000541"
     CDS             complement(4338..5066)
                     /gene="rmpM"
                     /locus_tag="WHG62_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ1724699.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            5430..6380
                     /locus_tag="WHG62_000542"
     CDS             5430..6380
                     /locus_tag="WHG62_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ1724700.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(6493..7227)
                     /gene="fnr"
                     /locus_tag="WHG62_000543"
     CDS             complement(6493..7227)
                     /gene="fnr"
                     /locus_tag="WHG62_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ1724701.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            7430..8851
                     /gene="hemN"
                     /locus_tag="WHG62_000544"
     CDS             7430..8851
                     /gene="hemN"
                     /locus_tag="WHG62_000544"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ1724702.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(9204..10778)
                     /locus_tag="WHG62_000545"
     CDS             complement(9204..10778)
                     /locus_tag="WHG62_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ1724703.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            11103..12203
                     /locus_tag="WHG62_000546"
     CDS             11103..12203
                     /locus_tag="WHG62_000546"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ1724704.1"
                     /translation="METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTQIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDKE
                     TRVVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWMQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLGGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADARQMYICGGGIRNPVLMADLAEYFGTRVSLHSTAELKLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            12322..13263
                     /gene="mafA"
                     /locus_tag="WHG62_000547"
     CDS             12322..13263
                     /gene="mafA"
                     /locus_tag="WHG62_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ1724705.1"
                     /translation="MKILLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATRYSYPA
                     YDTTATTKADALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNGTGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            13267..14685
                     /gene="mafB"
                     /locus_tag="WHG62_000548"
     CDS             13267..14685
                     /gene="mafB"
                     /locus_tag="WHG62_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ1724706.1"
                     /translation="MKPLRRLTNLLAACAVAVAAFGQPALAADLAQDPFITDNTQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQAAIQGNLGYTVRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADGYDGPQGGNYPKPTGA
                     RDEYTYNVNGVARSIKLNPTDTRDVRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AAIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKA
                     AVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGKHISGHRNY
                     IEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKSGLSTNFGT
                     IHSGKNGVHIVPANPKTIKKVQ"
     gene            14688..15005
                     /locus_tag="WHG62_000549"
     CDS             14688..15005
                     /locus_tag="WHG62_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724707.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKDLI
                     SQA"
     gene            15139..15816
                     /locus_tag="WHG62_000550"
     CDS             15139..15816
                     /locus_tag="WHG62_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
                     /protein_id="HEZ1724708.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGKTGYKPVTARYGNPYR
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLHSESGKTQTVRNTVV
                     KPKPLKAYNLTVADWHTYFVKGSQAEMEGVWVHNACPPRKTPSTPVYENDSEAYAAAK
                     KLGYRKIKERTRNDAAIFKKGKSYISRDVDSHNGGAWKEASSPKKLNRKETRNGTFDK
                     NLNRIGD"
     gene            15822..16220
                     /locus_tag="WHG62_000551"
     CDS             15822..16220
                     /locus_tag="WHG62_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ1724709.1"
                     /translation="MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRRKYPYPMDIPRDIVIGIGSIIDFLMVQNWKLFEIKASPWLPKSVKINERYERFR
                     VMLRYIFTDLDVEDWKFFYFPIQHSKGRLR"
     gene            16251..16628
                     /locus_tag="WHG62_000552"
     CDS             16251..16628
                     /locus_tag="WHG62_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ1724710.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRYVVIGIGTIIDFLMVPNWKLFEIKASPWLPDSVGINERYERLK
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            16759..17529
                     /locus_tag="WHG62_000553"
     CDS             16759..17529
                     /locus_tag="WHG62_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ1724711.1"
                     /translation="MVRTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTAQYGNPYR
                     ETVYIEISDGIGNSQTLISNSIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVANWHTYFVKSSQAETEGVWVHNDCPYGSSSAKGKSGSERNTAKRGT
                     FRQETLKNAWDLAADGSQPNSKKCPTCGKDVYGNPHNKEKRNTKDGWDGSHNPSWSNR
                     QHSSDRKEQLNDYNKGVSLECRHCNRSGGNKDERFKKK"
     gene            17526..18071
                     /locus_tag="WHG62_000554"
     CDS             17526..18071
                     /locus_tag="WHG62_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ1724712.1"
                     /translation="MITVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAEWVEKKGWNAFE
                     QFLLDNEVGNLSDMNRKPFTW"
     gene            18207..18875
                     /locus_tag="WHG62_000555"
     CDS             18207..18875
                     /locus_tag="WHG62_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ1724713.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGKTGYKPVTTRYGNPYR
                     ETVYIKVSDGIGKIQTLVSNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGNQAETEGVWVHNSCPPKRAPEYHAGTVSESNFLNVA
                     EKWLGENYKSYPNGRYVSQDGMRQVRYGHHETNSSTHHGHFESYDKPNGRVIENSVVT
                     IIQD"
     gene            18882..19151
                     /locus_tag="WHG62_000556"
     CDS             18882..19151
                     /locus_tag="WHG62_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724714.1"
                     /translation="MSVKELFKVILDKNKDFPIRTIHRTPMGVLPKPVALSIVQYEDD
                     QGFYLFYLDETGREQTDTYHDTLDSAFKQAEFEFGIRKEEWIQSS"
     gene            19430..20128
                     /locus_tag="WHG62_000557"
     CDS             19430..20128
                     /locus_tag="WHG62_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ1724715.1"
                     /translation="MVKTADGYKAIARIRVGDRVFAKDEASGKTGYKPVTTRYGNPYQ
                     ETVYIEISDGIGNNQTLISNRIHPFYSDSKWIKAEDLKAGSRLLSESGKTQTVRNIVV
                     KPTPLKAYNLTVADWHTYFVKGSQAETEGVWVHNSCPPYKRPNNATTKAQRESVQGKP
                     CVECGKLAEKMIADHKKPLVVEYYETGTIDKSKMRAIESVQPQCPTCSAKQGGRLSQY
                     SKEQKRKLSNGNKK"
     gene            20112..20465
                     /locus_tag="WHG62_000558"
     CDS             20112..20465
                     /locus_tag="WHG62_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724716.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQTGLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            20455..20778
                     /locus_tag="WHG62_000559"
     CDS             20455..20778
                     /locus_tag="WHG62_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HEZ1724717.1"
                     /translation="MIIDKKSTSDVLKQYQELGFDLTKPMIIEFFIGGSQKNLQSIES
                     RLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            20837..21064
                     /locus_tag="WHG62_000560"
     CDS             20837..21064
                     /locus_tag="WHG62_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724718.1"
                     /translation="MDIKFNTLGVILNGVNPEEKFIKIIDDQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            21192..21734
                     /locus_tag="WHG62_000561"
     CDS             21192..21734
                     /locus_tag="WHG62_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ1724719.1"
                     /translation="MINHIEKYTGTISHGSKSDSGSQYKLNIAAIPSSPNRDLKTYIT
                     LGLSKHDLNYKSRSEILFVCSLKYDENQIFPFLRWLAETIIENKKILLRGQVVYLPRS
                     IVDSTKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQ
                     FLLDNEVGNLSDMNRKPFTW"
     gene            21815..22351
                     /locus_tag="WHG62_000562"
     CDS             21815..22351
                     /locus_tag="WHG62_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ1724720.1"
                     /translation="MDYNQTVLSHLQNFWKHHDIKGFTWALGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDRFQLGKTVN
                     IGRPWVEQSSFQHFLISLPYPYGQELEYMDNVRFFWLLPITQPERLFLNTHSVEDLET
                     RFDELGIDYLDINRASVI"
     gene            22837..23190
                     /locus_tag="WHG62_000563"
     CDS             22837..23190
                     /locus_tag="WHG62_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724721.1"
                     /translation="MDKICVTEQDVNILASDRNYELNIEIFIDDIIHFQITDESYKVK
                     FSEYLFENKTENNSDGNPTANYFFEIIDDSYMDWLKEESFGFFEKKYYKAYIFFFSDS
                     VIEVISSTEPVFYSK"
     gene            23356..23805
                     /locus_tag="WHG62_000564"
     CDS             23356..23805
                     /locus_tag="WHG62_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724722.1"
                     /translation="MENRFEKIVKDIFSFTQFVSEAENEIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCNISHFLHFADRA
                     EADIPNQSRLYAEYWWEMEMFKMSVLEDWERSGRPLNWEKWQRQYRS"
     gene            23970..25103
                     /locus_tag="WHG62_000565"
     CDS             23970..25103
                     /locus_tag="WHG62_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724723.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAVRLSRL
                     KEKAKWFHVTEQEHGEEVWLNYYIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDAAGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLENLEKEVRRYAEAAARRSGGRRDLSH"
     gene            complement(25190..25465)
                     /locus_tag="WHG62_000566"
     CDS             complement(25190..25465)
                     /locus_tag="WHG62_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724724.1"
                     /translation="MNEGEVVLIPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLMCISVFWIVVFNL"
BASE COUNT         7355 a         6210 c         5896 g         6048 t
ORIGIN      
        1 ctttggaaaa tccgaaatgg ttgccggggc ggcgatcccc tatcattatt atttttttgt
       61 ctatataatt tcaaagggat aagcggattt tatgaatcct gcccgatttt ggcaataccg
      121 gttcgcggat aaactggctt aaatcaaatt atcggttaaa atggccgtct gaaatttgtt
      181 tgatgaaaac gagaaaacca tgtcccaaca atacgtctat tctatgctgc gcgtgagcaa
      241 ggttgtgccg ccgcagaaaa ccatcattaa agatatttcc ctttctttct tccccggcgc
      301 gaaaatcggc ctgctcggtt tgaacggcgc gggcaagtcc accgtgctgc ggattatggc
      361 gggcgtggat aaggaatttg agggcgaagc cgtgccgatg ggcggcatca aaatcggcta
      421 cctgccgcaa gagcctgagc ttgatccgga aaaaaccgtg cgcgaggaag tggaaagcgg
      481 tttgggcgaa gtggctgccg cgcagaaacg tttggaggaa gtgtatgccg agtacgccaa
      541 tcctgatgcg gattttgacg cgttggcaga agagcagggc cgcttggaag cgattattgc
      601 ggcaggttcg tccacgggcg gcggtgcgga acacgaattg gaaatcgccg ccgacgcgct
      661 gcgcctgccg gaatgggatg ccaaaatcga taatttgtcc ggcggtgaaa aacgccgcgt
      721 tgccttgtgc aaactcttgt tgagcaagcc cgatatgctt ttgctggacg agccgaccaa
      781 ccacttggat gcggaatcgg tcgaatggct ggagcaattt ctcgtgcgct tccccggcac
      841 agtcgttgcg gtaacgcacg accgctactt cctcgacaac gccgccgaat ggattttgga
      901 actcgaccgc ggccatggta ttccgtggaa aggcaattac tcgtcttggc tggagcagaa
      961 agaaaaacgc ttggaaaacg aggcaaaatc cgaagccgcg cgcgtgaagg cgatgaagca
     1021 ggaattggaa tgggtgcgcc aaaatgccaa aggccgtcaa gccaagtcca aagcgcgttt
     1081 ggcgcgtttc gaggaaatga gcaactacga ataccaaaaa cgcaacgaaa ctcaggaaat
     1141 tttcattccc gttgccgagc gtttgggtaa cgaagtgatt gaatttgtga atgtttccaa
     1201 atcgttcggc gataaagtgc tgattgacga tttgagcttc aaagtgcctg ctggcgcgat
     1261 tgtcggcatc atcggcccga acggcgcggg taaatcgacg ctgtttaaaa tgatttcggg
     1321 caaagagcag cccgattccg gcgaagtaaa aatcgggcaa accgtgaaaa tgagcctgat
     1381 tgaccaaagc cgcgaaggtt tgcaaaacga caaaaccgtg ttcgacaaca ttgccgaagg
     1441 ccgcgatatt ttgcaggttg gtcagtttga aattcccgcc cgccaatatt tggggcgttt
     1501 caacttcaaa ggcagcgacc aaagcaaaat tgcaggtcaa ttgtctggcg gcgaacgcgg
     1561 tcgtctgcac ttggcaaaaa ccttgttgag cggcggcaat gtattgctgc tggatgaacc
     1621 gtctaacgac cttgacgtgg aaaccctgcg cgcgttggaa gacgcattgt tggaatttgc
     1681 cggcagcgtg atggtgattt cgcacgaccg ttggttcctc gaccgtattg ctacgcatat
     1741 cttggcttgc gaaggcgact ccaaatgggt gttctttgac ggcaactatc aggaatacga
     1801 agccgacaag aaacgccgac tcggcgaaga aggcacgaaa ccgaaacgca tcaaatacaa
     1861 accggtaacg cgttaacctc cgaaacaatg ccgtctgaaa ggctttcaga cggcattttt
     1921 atagtggatt aaatttaaat caggacaagg caacgaagcc gcagacagta caaatagtac
     1981 ggcaaggcga ggtaacgccg tactggtttg aatttaatcc actatacaag gcagcaccgt
     2041 ttaaaacagc attgcaatcc tcaagacaat caaggtcatc accgcagccg ccatatcgtc
     2101 cgccataatg cccaaaccgc cgtgcagatt cttgtcaaac caaccgacgg ggggcggttt
     2161 gagcgcgtca aatagacgga acagaacaaa tgccgccagc caccacgtcc acctgaacgg
     2221 cacaaacgcc aacacaaaca gcatggcaac aatctcgtcc caaacaatcc caccgtggtc
     2281 gctgacaccc gtttcacgtt ccgcataagc gcaaatgcgt atgccccaca taaacagcac
     2341 gatacacaaa aaagccagca gccatccgtc cacacccgcc aatatcaaca caaatgccaa
     2401 aggcagtgcc gccaaagtgc cgaatgtgcc cggcgcgaac ggagccagcc cgctaccgaa
     2461 accgaaagcc aaaaaacaca acggccgttt caacagccac gcaaagtcag gtttaaaatc
     2521 agccaaaatg atcgaatcct aaagaatgta gttccaattc cctgccgtcg gcatctaaaa
     2581 ccttcagacg gcatcctccg ttgattttgc cgatgcgcgt taccggcacg ccgcaccgtt
     2641 ccgccgcatc aagcacgcgg ctgcggcaac tttccgatgc ggtaaaaacc agctcgtaat
     2701 catcacctcc cgccaaagta taagacagcc attgcgctcg gggcaaaata tctttcaata
     2761 cagataaaga cggcagcgaa tcggcccaaa tttccgcccc cacgccggaa gcggtcagga
     2821 tatgccccaa atcttgcgcg aggccgtctg aaacatcctg cgccgcccgg gcaaacggca
     2881 acagcgcaag ccccagccca acccttggct cggggcggag cagcttttgt tcgcattcgg
     2941 caaacacatc atccggcaac acacaccgtt tcagacggca gttcaaagcc gccgccgcca
     3001 taccgacacg ccccgacacc caaatatcgt cgcccgcaac cgccgcatca cgccgcaacg
     3061 ccctaccctt cggcaattcg ccgataatgg ttacattgaa cgccatatcg cccttggtcg
     3121 tatcgccgcc gattaaggtg atgccaaact tttttgccaa accgaaaaag ctaccgcaaa
     3181 accgttccag ccatacttca tccaattcgg gcaacgccgc gctcagcagc acccaacgcg
     3241 gtatcgcacc catcgccgcc atatctgaaa tattgacggc caaaaccttc caagccaagt
     3301 cttcaggttt gacatctgca aaaaaatgcc tgtccctcag cagcatatcc gcactgaaac
     3361 acaaatcgaa accctcacgt gggcggacaa tcgccgcatc gtcgcctatg cccaatacga
     3421 catccttatc cgtgcctgtt tgcaaatacc gtttgatgaa gtcgaattct ttcatatccc
     3481 aaaatatccg gcgagcaaag ccaatttaaa tcatagcaag gcagcaaagg tcgtacaaac
     3541 aataaagcgg ctcattcagt gtttcagcgt atttcacttt tagccttagc cataccgtac
     3601 ccgtatgcac cgaccaccct gtttcaacac acaaacggca tatcaaagca ccgcactgca
     3661 cgccaccccg aatgcaaagc ggcaacttcc gccaccgatt aggctcaatc gctgcaactg
     3721 acggggtttc aaccgaaaag ggctgatgat aaaaccatat ccggcataca gtgccgcaca
     3781 catctggcac gattccatcc atttcccaat gagggggaaa ggcgtgaatt tgtatgaatt
     3841 atccctttca gggcttgata cagaaaggat tccctttcta tgggcaaacc cacatcctac
     3901 cgccttaaaa tcagagtttc aaccgatata gtggattaaa tttaaaccag tacagcgttg
     3961 ccttacctta gctcaaagag aacgattctc taaggtgctg aagcaccaag tgaatcggtt
     4021 ccgtactatt tgtactatct gcggcttcgt cgccttgtcc tgatttttgt taatccacta
     4081 taaagcacgg caatgggaca caaacctgaa tctgaatctg aatctgaatc tgaatctgaa
     4141 tccgaatccg aatccgaatc cgaacctgca cctcgattct gacgatagcc gtttcagaaa
     4201 accacccaaa aaaacaaacc ccgcaaaagc gggggtttgt ttcacatcat cgatgccgac
     4261 cgacgtttca cgaatattgc aacagtacct ggtacaaaat ccactaacct catgcatcgg
     4321 caagatattg cctagcctta gtgttggtga tgattgtgtg ccggcacaac ctgacgggtt
     4381 acgatgctgc ggattttcac atccacacgg cggtcaggtt cgatacatgc aatcagagcc
     4441 tcacgttttt tggctttaga gactttcgca cccagtttgg caacttcggc ttcacaaact
     4501 tgagtcattt gcgcttgaga ttcgcccaag ccaacagcag aaattctaga aacaggtacg
     4561 ccgttgctga ccaggttgtt tgccactacg tatgcgcggc gttcggacag ggcctgattg
     4621 tatttgtcag aacccataaa gtcggtatgg ccttcgacgc ggacagattg gacattggtt
     4681 cgactcaggc gttgcgccaa tactttcagg ttgtcttgag cttcggcgcg caatgaatcc
     4741 ttatcgaaac cgaacagggt tttggcagac agggaaatgg tttcatcaac atattgcgga
     4801 gcctgctcca caacgacgac aggcgcgggt gcgggttcgg gttctggctc gggttcgggg
     4861 gcagcaaccg catcgccgca ttctacgcga ccttggcttg ctttatcaaa gtaggcgttt
     4921 ttccagcatt cgccatagtt gttgcgtacg atttcgttcg actggccgct tacggtgtaa
     4981 ccctgaacgg acgcctcgcc cgcaacagca gtgccggaag cgagcaatgc aacgaataat
     5041 gcgcttaatt tcagctgttt ggtcatttta ttccctcatt aaatttgtac agcagataca
     5101 gaagcaactg ctgaattgcc aacatacagg ccgctgtaga aacatggcgg caaatcggat
     5161 atttcagtct ccactataaa gaagcagggg gaggactgtc aatactcaac gcctgaaaac
     5221 aaccgtaaaa cagcctgttt cctgatagtc tatcatgccg aaaaatcaat tccgtgtcat
     5281 tactttaggg ggattttttc catatcgcac gattgccgtt gcacaaaaac aacaaacaca
     5341 acggcaaagc cccataccgt accggcaaga aaatatgata aattataaac aatgttcagc
     5401 cacccgacac agacccacac cgacccgcca tgaaattaca acaattgaaa tacgccttag
     5461 aagtttacca gcacaacctg aacgtttccg aagcggccga agccttgttt acttcgcaac
     5521 ccggcatctc caaacaaatc aaattgctgg aagaagaaat cggcattcag atttttatcc
     5581 gcagcggcaa gcgcgtggtt tcggtctcgc agccgggcaa ggtggttttg gatattgcgg
     5641 aacgtatttt acgcgatgta cagaacatta aaaatatcgg cagcgagttt accggacagg
     5701 acagcggttc gctgacggtt gccacgacgc atactcaggc acgctatgcc ctacccttga
     5761 ttgttgccga ttttgtgaaa cgctatccga aagtcaacct gaccatcaaa caggggagcc
     5821 ctgccgccat cgcacgtatg gttacctcag gcgaggcgga cttggcgatt gttacggaac
     5881 ggatagacga ccatcccgaa ctgggaaaac ttccctgcta tgactggact catgcggtta
     5941 tcgtaccgaa cgaccacccc ttgctcgaat gcagaaaccc cctccgcatt gaagatttgg
     6001 cgaggtttcc gctgattact tatgaatttg cattcaatgc gggcagcagc atcgcgcggg
     6061 cattttccaa agcccgtttg gaacagccgg atgtcgcatt ggcggcggcg gatacggacg
     6121 tattgaagac ttatgtgcgc ttgggtttgg gcgtgggact gatggcgaaa atggcgtaca
     6181 acccggatac ggacggcgat ttgcagcttg tggatgcggc acacctgttc gagccgtcgc
     6241 cgacgtggat tgctttgcgc agcgatactt atttgcgcgg atatgcctac gactttatcc
     6301 aagcgtttgc gccgcacctg acacgcgaga aggtggatag gattctgtac acgcccatca
     6361 gcgaggattt ttcgatttag gcggctgccg gttttcagac ggcactttgc ggcagataca
     6421 acaaacagga cagatgtttt cgtctgccct gtgtttattg agaatgctgt ctgaaatgtt
     6481 cgtacgggtt aatcaaatgg cgtgcgagca gccggacacc atttttttca acacctgcag
     6541 attgaggatt ttgatgtgct tatgctcgac ggaaatcaat ccttcctgat ggaacttgga
     6601 taatgtgcgg ctgacggttt caagtttcag cccgagataa ctgccgattt cttcgcggga
     6661 cattcttaag atgaagtcgt tggcagcaaa acctcgggaa taaaggcgtt gggaaaggtt
     6721 cagcaggaag gcggcaatcc gctcttcggc gcgcatattg cccaacagca gcataacacc
     6781 ttggtcgcgc acgatttcac ggctcatcat gcggaagaag tgcgtacgca ggctggggat
     6841 gttttgcccc agttcttcga tgtgggtaaa cggcagttcg cacacttcgc tgtcttccaa
     6901 ggcgaccgcg tcgcaactgt gcacatggga acagatgccg tccatgccga tgagttcgcc
     6961 cgacataaag aaacccgtta cctgatcgcg gccgtcctga ctggcgacgg ttgttttgaa
     7021 gaagcccgaa cggatggcaa agagcgaggt aaaggcttcg ccgacacaga acaggtattc
     7081 gccctttttc aggcggcggc tttgacggat gacggcatcg agttggctga gctcgttggg
     7141 cagcagcccg acaggcaggc agagttcccg caaagaacag gaagaacaca gcgttttcat
     7201 ctgatgtgta gtattatgcg aagccatacc gtaccttttt gtgcgctttg ccccatcatg
     7261 attatagtgg attaaattta aaccagtacg gcgttgcctc gccttgtcct tatttaaatt
     7321 taatccacta tatgtgctta ttgacacata tcaagacagg tttatcatac tgtggcattc
     7381 taccaaacta tccaaaattt gactaacatc ataaaaccgc acacacacca tgaaaatcat
     7441 tcagatacag aacaatcaca atgtaaacga tgaccgcccc gagtttgacc gcgcgctgat
     7501 tgccagcctg cccgccagcg gcccgcgcta cacttcctac cctaccgccg accgtttcca
     7561 tgacggtttc cgcgaaggcg aatatatcaa agctttacat ttgcgcggta tgggcgcgtt
     7621 aaacaaaccg ctttcccttt acattcacat tccgttctgc aacaccatct gctactactg
     7681 cggctgcaac aaaatcatca ccaaagacaa aagccgcgcc gatgcctaca tcgaatatct
     7741 tgaaaaagaa atggaactgc tcgctccaca tctgaacgga cggcaccagc ttgcccaact
     7801 gcacttcggc ggcggcacgc cgaccttttt gagcgacgaa cagatcgaac gtgtcttccg
     7861 catgatacgc aaacatttcg agttaatccc caccggcgaa tactccatcg aaatcgaccc
     7921 gcgcaaagtc agccgcgaca ccgtcctcat gctcggcaga ctcggcttca accgcatgag
     7981 catcggcatt caggatttcg accccaaagt gcaggcggcg gtcaaccgca tccaaagtta
     8041 cgaagaaacc aaagaagtca tcgatgcggc gcgcgaagcg gggttcaaat ccgtcagcgt
     8101 cgatttgatt tacggcctgc cgcaccagac ttcggaaagc atcaaaacca ccatcgatac
     8161 cgttttgtcg ctcgatcccg accgcctcgc cctttatcac tacgcccacc tgccgcacgt
     8221 gttcaaaccg caacgccgca tcgataccgc cgccgttccc gacagcgaag agaagctcga
     8281 tatgctgcaa tactgcgtcc aaaccctaac cgaacgcggc tacgtcttca tcggcatgga
     8341 tcatttcgcc aaacctgacg acgaactctc catcgccctc aaagaaggct tcctccagcg
     8401 caacttccaa ggctattcga cctacgcgga ttgcgatttg gtcgccatcg gcgtgtcgtc
     8461 catcggcaaa atcggcagca cctattccca aaacgaacgc gacatcgatg cctactatgc
     8521 cgccatcgac gaaggcagac tgcccatcat gcgcggttat cagctcaatc aggacgacat
     8581 cctgcgccgc aacatcattc aggatttgat gtgccgtttc gcgctcgact accggattta
     8641 cgaaagtatg ttcggcatcc cgttcgaccg ctacttcaaa gacgaactgg cggatttgga
     8701 aaaactcgcc ggtttgggat tggtgcgcct gaacagccac gggctgaccg ttaccccgaa
     8761 aggacgcttc ctcatccgca acatcgccat ggtcttcgat taccacctgc gccataaaga
     8821 aaccaaggcg aaatattcgc aaacggtgtg attgcgtcta acgtacaaat gccgtctgaa
     8881 aggctttttc agacggcatt ttgctgccgg caggataagt gttttcaaga acaggcggcg
     8941 gcatatcata acgttccgca cctttgtgtc cgaccgttcc gaaaccaaga tatagtggat
     9001 taacaaaaac cagtacagcg ttgcctcgcc ttgccgtact atctgtactg tctgcggctt
     9061 cgtcgccttg tcctgatttt tgttaatcac tataccaaac ggcatatccc gacagaacag
     9121 attgtgcata aggcacaagc ccgcacattc catcaacaaa atgccgtctg aacacgggtt
     9181 cagacggcat cagtatttta caatcagaat actgcctgta aaaccaagta gcagacaacc
     9241 gacaatacag cggcggcagg cagggtaatg acccacgcca aaccgatggg cttcatcagt
     9301 ttccagttgg cattgcggtt gaccagaccg atgccgagta ccgcgccgac caagatatgc
     9361 gtactggaca cgggcagccc catcagcgac gcgcccatca cgacggatgc ggcggacagt
     9421 tcggcggtaa aacccgaagc aggatgcatt tccgccaaac tcgtaccgac ggttttaatc
     9481 acctctttac cgacaaacca caaaccgaca atcagcgcga taccgaaagt cagcatcgca
     9541 atcgggggga cgacattttg cgcggcaacg ctgttggtac gcaaaacatc cataatcgcg
     9601 gcaaacggac cgatggcgtt ggcgatatcg ttcgcaccgt ggctgaatgc gaaaccgcag
     9661 gcggtaaaga cctgcatcca tgaaaacatc tgaaaggtcg atttgcccaa gtctttacgc
     9721 ttgaggcttt tggcaaacac aaacgtcccc atccacaccg ccgcgcctat cataaagatg
     9781 gtcaggaagc tgttgacgtt gctcatcccc aaatgcaggt ttttcaagcc cttgaaaatc
     9841 agcatagcgg aaatcatcat cgcgccgaac gaagcgataa agggaatcca agaatgcagt
     9901 gccttgtagg aatcgacatt gtttttacgg ttgtcgaacg cataaagacc gcggtaatac
     9961 tccgattgca gctcttgcgg atcgaattcg ggttcgtcgt aaatttgcgc gtcgtgcgcc
    10021 attttggtgg cgtactcgac tttttcggct tcggacaaac cctcgaaaaa caggcggtgc
    10081 cgttctttat aggccttttt ttcctgcttg atgcccttga gcgtgccttc cgcccaagcg
    10141 ttgtaatcta agacgttttt cttgacgcgc gaaaacagga aataggacac cgcgccgccc
    10201 aacacgggcg acaataccca agaaacacca ataccgccca gcttgcccca acgtatcaaa
    10261 tcgcccgatg cggcatcgtt cattaccgcc atacataccg cgctaccgac aatgccgccg
    10321 ataatggaat gggtggtaga taccggaagc ccttttttcg aggcaaacaa cagccacaac
    10381 gccgccgcca aaagcgcgga catcataata aacacaaact gtatgggttc gaaatcaaca
    10441 cccttcaaat cgacgatgcc tttgcgtatg gtattggtta cctcgccgcc cgcgatgacc
    10501 gcgccgctga cctcaaatac cgccgcaatc agcaaagcct gcgggatggt cagcgtaccc
    10561 gcaccgacgc tggtgccgaa agaattggca acatcgttgc cgccgatgtt gaacgccata
    10621 aacacgccga acatcgtggc aataatgaat aaggcggcgt aattgtaatg ggtataaccc
    10681 aagccccaat aaataaaata gccgactgta cctaccagca tggcggcaaa gacggcgttg
    10741 atggttttaa catttgcgct catttggatt tgagccatgg caatcttcct ttaatgtggt
    10801 ggaaatcatg agtgttgccg acactgtact gctgcctccg gtcgaactgc cgtttcggga
    10861 tatggcagac gcatccttcc ttctgaaccg catccgaata cccccaaacc tgaccgaatg
    10921 caaaactgct gccggaaacg gtttgtatga cacttctact actggatgtt gcgggcgcat
    10981 tataatattt ttccatccgt cttgaaacat ttatttacac tttatttaca ctgcggcggc
    11041 aaatcggtat acgagcgtca atacacgtta aaatggcgtt ttgcaccagt ttgggagtga
    11101 tgatggaaac acagctttac atcggcatca tgtcgggaac cagcatggac ggggcggatg
    11161 ccgtactgat acggatggac ggcggcaaat ggctgggcgc ggaagggcac gcctttaccc
    11221 cctatcccga caggctgcgc cgccaattgc tggatttgca ggacacaggc gcagacgaac
    11281 tgcaccgcag caggattttg tcgcaagaac tcagccgcct gtacgcgcaa accgccgccg
    11341 aactgctgtg cagtcaaaac ctcgcgccgt ccgacattac cgccctcggc tgccacgggc
    11401 aaaccgtccg acacgcgccg gaacacggtt acagcataca gcttgccgat ttgccgctgc
    11461 tggcggaacg gactcagatt tttaccgtcg gcgacttccg cagccgcgac cttgcggccg
    11521 gcggacaagg tgcgccgctc gtccccgcct ttcacaaagc cctgttccgc gatgacaaag
    11581 aaacacgcgt ggtactgaac atcggcggga ttgccaacat cagcgtactc ccctccgacg
    11641 cacccgcctt cggcttcgac acagggccgg gcaatatgct gatggacgcg tggatgcagg
    11701 cacactggca gcttccttac gacaaaaacg gtgcaaaggc ggcacaaggc aacatattgc
    11761 cgcaactgct cgacaggctg ctcgcccacc cgtatttcgc acaaccccac cctaaaagca
    11821 cggggcgcga actgtttgcc ctaaattggc tcgaaaccta ccttggcggc ggcgaaaacc
    11881 gatacgacgt attgcggacg ctttcccgtt ttaccgcgca aaccgttttc gacgccgtct
    11941 cacacgcagc ggcagatgcc cgtcaaatgt acatttgcgg cggcggcatc cgcaatcctg
    12001 ttttaatggc ggatttggcg gaatatttcg gcacacgcgt ttccctgcac agcaccgccg
    12061 aactgaagct cgatccgcaa tgggtggaag cagccgcatt tgcgtggttg gcggcgtgtt
    12121 ggattaatcg catccccggt agtccgcaca aagcaaccgg cgcatccaaa ccgtgtattc
    12181 tgggcgcggg atattattat tgagcgcaaa taccgtctga aagccatttc cgccgctcag
    12241 acggcatttt cgcccctttc gtttacaaac ccttaaaatc catttacact caaacccgtt
    12301 caaaacaaaa caaaccctgc catgaaaatc ctgctcctcc tcatccccct cgtcctaacc
    12361 gcctgcggca cactgaccgg catacccgcc cacggcggcg gcaaacgctt tgccgtcgaa
    12421 caagaactcg tcgccgcatc gtcccgcgcc gccgtcaaag aaatggattt gtccgccctg
    12481 aaaggacgca aagccgccct ttacgtctcc gttatgggcg accaaggttc gggcaacata
    12541 agcggcggac gctactctat cgacgcactg atacgcggtg gctaccacaa caaccccgaa
    12601 agtgccaccc gatacagcta ccccgcctac gacactaccg ccaccaccaa agccgacgcg
    12661 ctctccagcg taaccacttc cacatcgctt ttgaacgccc ccgccgccgc cctgactaga
    12721 aacagcggac gcaaaggcga acgttccgcc ggactgtccg tcaacggcac gggcgactac
    12781 cgcaacgaaa ccctgctcgc caacccccgc gacgtttctt tcctgaccaa cctcatccaa
    12841 accgtcttct acctgcgcgg catcgaagtc gtaccgcccg aatacgccga caccgacgta
    12901 ttcgtaaccg tcgacgtatt cggcaccgtc cgcagccgta ccgaactgca cctctacaac
    12961 gccgaaaccc ttaaagccca aaccaagctc gaatatttcg ccgtcgaccg cgacagccgg
    13021 aaactgctga ttgcccctaa aaccgccgcc tacgaatccc aataccaaga acaatacgcc
    13081 ctctggatgg gaccttacag cgtcggcaaa accgtcaaag cctcagaccg cctgatggtc
    13141 gatttctccg acatcacccc ctacggcgac acaaccgccc aaaaccgtcc cgacttcaaa
    13201 caaaacaacg gtaaaaaccc cgatgtcggc aacgaagtca tccgccgccg caaaggagga
    13261 taaaccgtga aaccgctgcg cagactgaca aacctccttg ccgcctgcgc cgtagcggtc
    13321 gccgccttcg gacagcccgc cctcgcggcg gacttggcgc aagacccgtt cattaccgat
    13381 aacacccaac ggcagcacta cgaacccggc ggcaaatacc acctcttcgg cgacccgcgc
    13441 ggcagcgttt ccgaccgcac cggcaaaatc aacgtcatcc aagactatac ccaccagatg
    13501 ggcaacctgc tcatccaaca ggcggcaatc caaggcaatc ttggttacac cgtccgcttt
    13561 tccggacacg gacacgaaga acacgccccc ttcgacaacc acgccgccga cagcgcaagc
    13621 aaagaacaag gcaacgttga cgaaggcttt accgtatacc gcctcaactg ggaagggcac
    13681 gaacatcatc ccgccgacgg ctatgacggc ccgcagggcg gcaattaccc caaacctacg
    13741 ggagcacgcg acgaatacac ctataacgtt aacggcgtag cccgcagcat caaactcaat
    13801 ccgaccgaca cccgcgacgt cagacaacgc atatccgaca attacagcaa cctcggcagc
    13861 aatttctccg accgcgccga tgaagccaac agaaaaatgt tcgagcacaa tgccaagctc
    13921 gaccgctggg gcaacagcat ggagtttatc aacggcgtcg ccgccggcgc gctcaacccc
    13981 tttatcagcg cgggcgaagc cttgggcata ggcgacatac tgtacggaac gcgctatgcc
    14041 atagacaaag ccgcaatgcg caacatcgcc cccttacccg ccgagggcaa attcgccgcc
    14101 atcggcggct tgggcagcgt ggcgggcttt gaaaagaata cgcgcgaagc cgttgaccgg
    14161 tggatacagg aaaaccccaa tgccgccgaa accgtcgaag ccctggtcaa cgtcctgccg
    14221 tttgccaaag tcaaaaacct gacaaaggcg gcaaaaccgg ggaaggctgc ggttagtggg
    14281 gatttctcag actcctacaa gcataacact gcttcaagat tatctcagtc tgtagatgga
    14341 gaaatgtttc aaacccgcaa tgttgatttt aaagcaaaat ctattgggac taaaattcat
    14401 gatggagctc aagggaaaca tatttcagga catagaaact acattgaagg taagagtact
    14461 ttaaatcaaa acattaatcc tcaagaattg ttgaacggaa tacattcagg tgcttatcca
    14521 gttatttcta aaggagcaag aggaaatcct gttgttgatt ttgggtatcc tataggcagc
    14581 gatgggaaat caggattaag taccaatttt ggtacgattc attcaggtaa aaatggagtt
    14641 cacattgttc cggctaaccc taaaaccatt aaaaaggtgc aatagttatg aatatattac
    14701 caagctggct gcgagtcggt atgaatatag caatgctggg catgatacac tcagatatca
    14761 ggttaattac cgtagattac gaggaaggaa gaaggttttt aaaaatcaaa aattatttat
    14821 caagagaagc catcacagaa gaccatgaag atatggaata tttgattaca gagttatggt
    14881 ctatgtgtgg agaatatttt gatgaagctg actttgaatg tatttattct aatcattctt
    14941 ctatggagtt aaaccaaata aatggtgcag tattcaggag aaaggactta atttcgcaag
    15001 cgtaggttaa aaaaccaaca atcacaatgt cttctgaaac cgtgtttaat tttcaggcga
    15061 ccttcccctt attttaaaca ggatattggg aactaagttc ttcaaaaatc ctacacctgc
    15121 tccttccacg gcagcacctt ggtcaaaacg gcagacggct acaaagccat tgcccatatt
    15181 caagccggag accgcgtcct ttccaaggac gaggcaagcg ggaaaacggg atacaaaccc
    15241 gttaccgccc gatacggcaa tccgtatagg gaaaccgttt acattaaagt ttcagacggc
    15301 atcggcaaca gccaaaccct gatttccaac cgcatccacc cgttttattc ggacggcaaa
    15361 tggattaaag cggaagattt gaaagcggga agcaggctgc attccgaaag cggcaaaacc
    15421 caaaccgtcc gcaacaccgt tgtcaaacca aaaccgctca aagcctacaa tctgaccgtt
    15481 gccgattggc atacctactt cgtcaagggc agtcaggcgg aaatggaagg agtttgggtt
    15541 cataatgcgt gtccgccaag aaaaacacca tctacccccg tatatgagaa tgattcagaa
    15601 gcatatgcag cagcaaagaa attgggatat agaaaaataa aagaaagaac gagaaatgat
    15661 gctgccattt ttaaaaaagg aaagagttat atatcacgcg atgtagattc acataatgga
    15721 ggggcttgga aagaagcatc ttcacccaag aagctgaaca gaaaagaaac aagaaatggt
    15781 acatttgata aaaacctaaa tcgtattgga gattaattat tatgtgtgag ttcaaggatt
    15841 ttagaagaaa catcccttgt tttgaagagt atgacgaaaa ttcatttatt ggcaaatggt
    15901 atgatgacgg ggtgtgggat gatgaagaat attggaaatt ggagaatgat ttaatcgagg
    15961 ttaggagaaa atatccttat ccgatggata taccaaggga catcgtgatt ggaatcggta
    16021 gcattattga ttttttaatg gttcaaaatt ggaaactttt tgaaattaaa gcttctcctt
    16081 ggttgcctaa aagtgtcaaa attaatgagc gttatgaaag gttcagagta atgcttcgtt
    16141 atatttttac tgatttagat gtagaggact ggaaattttt ttactttcca atacaacata
    16201 gtaaaggtag attgagatga aaagtttaat tatattggag atacattatt atgtgtgagt
    16261 tcaaggatat tataagaaac gttccttatt ttgaggggta tgacgaaaat tcatttattg
    16321 gcaaatggta tgatgacggg gtgtgggatg atgaagaata ttggaagttg gagaatgatt
    16381 taattgaggt tagaaaaaaa tatccttatc cgatggatat accaagatat gttgtcattg
    16441 gaatcggtac cattattgat ttcttaatgg ttccaaattg gaaacttttt gaaattaaag
    16501 cttccccttg gctacctgat agcgtaggaa ttaatgaacg ttatgaaagg cttaaaacaa
    16561 tgctccgtta tatttttacc gagaaagaca tagtcaacgt gcgatttgat tattacaaca
    16621 aaaaatagca aaccccggca atcaaaatgc cgtctgaaac cgtgtttaat tttcaggcga
    16681 ccttcccctt attttaaaca ggatattggg aactaagttc ttcaaaaatc ctacacctgc
    16741 tccttccacg gcagcacctt ggtcagaacg gcagacggct acaaagccat cgcccatatt
    16801 caagccggag accgcgtcct ttccaaggac gaggcaagcg gagaaacggg atacaaacct
    16861 gttaccgccc aatacggcaa tccgtatcgg gaaaccgttt acattgaaat ttcagacggc
    16921 atcggtaaca gccaaaccct gatttccaac agcatccatc cgttttacag tcaaggaaaa
    16981 tggatacagg caggtcgtct gaaaaaaggc gacaccctgc tttccgaaag cggtgcaaaa
    17041 cagacggttc aaaacattac cctcaaacag cagccgctca aagcctacaa cctgaccgtc
    17101 gccaactggc atacctactt cgtcaagagc agtcaggcgg aaacggaagg ggtttgggtt
    17161 cataatgatt gtccgtatgg tagttctagc gcaaaaggta aaagtggcag tgagagaaat
    17221 actgctaaac gtggaacctt cagacaagaa acgctaaaaa atgcatggga tttggcagca
    17281 gatggtagcc agcctaattc aaaaaaatgt cctacatgtg gtaaagatgt atatggtaat
    17341 ccccataaca aggagaaacg taatacaaaa gatggttggg atggaagtca taatccatca
    17401 tggagtaacc gtcaacatag ttctgatcgt aaggagcaac taaatgatta taataaagga
    17461 gtaagtttag aatgcagaca ttgcaatcga tctggtggca acaaggatga aaggtttaag
    17521 aaaaaatgat tacagtcgaa catttagagc attatttggg tgaaatcgaa agcggtataa
    17581 aatgcttgga tcgacgttat catctcagcg tttccgtctt cccatcacaa ccatataaag
    17641 gggtaactac tttttctact ttaggcttga atcgatatga cttgaactat aaaagtaggt
    17701 ttgaattaat ttttacctgt tctgaagaat ggaataaaga aaatattgca gcttttctat
    17761 caggagtggc tgaatatttg attgacaata gacaacctat tttaagaggt gaaattattc
    17821 aattacccag ggtaattatc gaaggtagca aaatggatgc actgtatgtt tccgccccat
    17881 tttatttcga cgatgatttt caggtctgtt atggcgaaca ctacaatatc gttttccctt
    17941 tgcttgtccc cttgtataaa caggaagccg aatgggtgga aaaaaagggt tggaatgctt
    18001 ttgagcagtt cttgctggat aatgaagttg gcaacctttc ggatatgaat cggaaaccgt
    18061 ttacttggta aggattttct taaatttaat caaagtgccg tctgaaaccg tgtttaattt
    18121 tcaggcgacc ttccccttat tttaaacagg atattgggaa ctaagttctt caaaaatcct
    18181 acacctgctc cttccacggc agcaccttgg tcaaaacggc agacggctac aaagccattg
    18241 cccatattca agccggagac cgcgtccttt ccaaggacga ggcaagcggg aaaacgggat
    18301 acaaacccgt taccacccga tacggtaatc cgtatcggga aaccgtttac attaaagttt
    18361 cagacggcat cggtaaaata cagaccctcg tttccaataa aatccacccg ttttacagtc
    18421 aaggaaaatg gatacaggca ggtcgtctga aaaaaggcga caccctgctt tccgaaagcg
    18481 gtgcaaaaca gacggttcaa aacattactc tcaaacagca gccgctcaaa gcctacaatc
    18541 tgaccgttgc cgattggcat acttacttcg ttaagggtaa tcaggcggaa acggaagggg
    18601 tttgggttca taattcttgt ccgcccaaaa gagctcccga ataccatgca ggaactgtat
    18661 ctgaatctaa ttttttaaat gtagctgaga aatggctagg agaaaactat aagtcatatc
    18721 caaatggtcg atatgtatca caagatggaa tgcgacaggt acgatatggt catcatgaaa
    18781 caaattcatc tacacatcat ggtcattttg aatcatatga caaacccaat ggacgtgtaa
    18841 tagaaaatag tgtagtaaca attattcagg attaaaaaat tatgagtgta aaagaattat
    18901 tcaaagttat cttagataaa aataaagatt ttcctattag aacgattcat cgcactccaa
    18961 tgggggtact tcccaagcct gttgctttaa gtattgttca atatgaagat gaccaaggat
    19021 tttatttatt ttatttggat gagaccggtc gggaacaaac ggatacttat catgacacat
    19081 tagattcggc atttaaacag gctgaatttg aatttggaat tagaaaagaa gaatggatac
    19141 aaagttctta ggtagcaaga atcaaaaggt catctgaaac cgtgtttggt ttttcagaca
    19201 acctttctat cagtaaaaac gagatgttgg gttttcatcc gacctaggct tgcgcagctc
    19261 aagccaatga taataggtta agtaaccgta ggttggattg aaaacccaac aattaaaagg
    19321 ctgtctgaaa tcaagcttgt ttttcagacg gcatttcctt catttgaaac aggatattga
    19381 gaactaagtt tttcaaaaat cctacacctg ctccttccac ggcagcacct tggtcaaaac
    19441 ggcagacggc tacaaagcca ttgcccgtat ccgagtcggc gaccgcgtct ttgccaagga
    19501 cgaggcaagc ggaaaaacag gatacaaacc cgttaccacc cgatacggca atccgtacca
    19561 ggaaaccgtt tacattgaaa tttcagacgg catcggcaac aaccaaaccc tgatttccaa
    19621 ccgcatccat ccgttttatt cggacagcaa atggattaaa gcggaagatt tgaaagcggg
    19681 aagcaggctg ttatccgaaa gcggcaaaac ccaaaccgtc cgcaacatcg ttgtcaaacc
    19741 aacaccgctc aaagcctaca atctgaccgt tgccgactgg catacttact tcgtcaaggg
    19801 cagtcaggcg gaaacggaag gggtttgggt tcataattct tgtccgccat ataagagacc
    19861 aaataacgca acgacaaaag cgcaacgaga aagtgtacaa ggaaaaccct gcgttgaatg
    19921 cggtaaatta gccgaaaaaa tgattgccga ccataaaaaa ccattagttg tcgagtatta
    19981 tgaaacaggg acaattgaca aatctaagat gagagcaatt gaatcagtac aaccgcaatg
    20041 tccgacttgt tctgcaaaac aaggagggag attaagccaa tattcaaaag aacagaaaag
    20101 gaaactgagt aatgggaata aaaaatgaac aaataataat ttgtaaaaaa tataatacag
    20161 aaatatatcc tgtttccgat gtttcaaaaa tcggtgttgc tgaaaatgtc aaacagacag
    20221 gcctgtatcc gattaacggg ttaaggcacc gtcccaaagg tgatactaac ggttggtata
    20281 tctgggccgg tgaaaacttc tcctatgata aaaatttttt cctgcccttg catacgttcc
    20341 atttgcaaat atggcgaccc gaaatcatcc cctttttaac acttccgccc ggttaccgtt
    20401 ttttaattgg ggaaaacggt tatgaagatg tatggtttga tgaattgcta ttaaatgata
    20461 attgacaaaa aatctacttc agatgtactg aaacaatatc aagaactagg gtttgatttg
    20521 acaaaaccta tgataataga gttttttata ggaggttctc aaaagaatct gcaatcaata
    20581 gaaagccgac tcatttctta tcgacaagat tttcaaatca gtattgaaca agatgaattc
    20641 ggagaaatgt ggacttgcta ttgttccgtc aatatcgtcc cttcccttga aaacatttta
    20701 gctattgaaa ctacgttatt tggtattgca caaaaaaatg attgtaatta tgaaggtttt
    20761 ggttcgtatg ggaactaaca aaaagtgtag gttgggttga aaaaaccata ttcccattaa
    20821 agattagggt gtgtctatgg acataaaatt caatactttg ggggttatcc tgaatggggt
    20881 caatcctgaa gaaaaattca taaaaattat tgatgatcag gaaaataccg ggggatttct
    20941 gatactgtta tcttcaaatg acaaattctc atcatttgac agttacgatg actgggtcga
    21001 aaacttagaa atattaaaag aatacctgca agaatctcat tggataataa agtgggtcgg
    21061 atagtcggca aacgtagtcc gtctgaaacg cttttacttt tcagacggac tttctatcaa
    21121 tgggaacaag gcgttttgtc tcaatctggt ctatgattat ttcgatacag tgatgggaag
    21181 ctaagaaaaa tatgattaat catattgaaa aatatacagg cactatttct catggctcga
    21241 aaagtgattc gggaagtcag tacaaattaa atatcgcagc tattccctct tcccctaaca
    21301 gggatttaaa aacttatatt actttagggt taagcaaaca tgatctgaat tataaaagca
    21361 gatctgaaat actttttgta tgttctttaa aatatgatga aaatcagatt tttccatttt
    21421 taagatggtt ggcagaaacc atcattgaga ataaaaaaat ccttcttcgg gggcaggttg
    21481 tttatttgcc cagaagcatt gttgattcaa caaaaatgga tgcactgtat gtttccgccc
    21541 cattttattt cgatgatgat tttcaggtct gttatggcga acactacaat atcgttttcc
    21601 ctttgcttgt ccccttgtat aaacaggaag cagaattggt ggaaaagaaa ggttggaatg
    21661 cttttgagca gttcttgttg gataatgaag ttggcaacct ttcggatatg aatcggaaac
    21721 cgtttacttg gtaaatacct tcttcaaacg gtcaatgccg tctgaaaaac cttgtttcag
    21781 gtttcaggcg acctttgaaa acaggctaaa aagcatggac tataaccaaa ctgttttatc
    21841 tcatttgcaa aatttttgga aacatcatga tattaaagga tttacttggg ctttaggaag
    21901 gattgttgaa gaacttcccg atttccaagt tttccaagtg attcctaatc atgaagatga
    21961 gccttgggtt tatgtcagct ctggaatagg tcaattttta gggcaggagt tttttatcat
    22021 cagcccattt gaaacacctg aacatattga gaccttggca atgctggcat ctgcaagtat
    22081 gcattatccc gatcgatttc aattagggaa aacggtcaat atcggcagac cgtgggttga
    22141 gcaatcatcc ttccagcatt ttctgatttc tctgccttat ccttatgggc aagaattgga
    22201 atatatggat aatgtccgat ttttctggtt attgccaatt acccagccag aaagactttt
    22261 cttgaatact cattcagtag aagacttgga aacgagattt gatgagctag gtattgatta
    22321 tttggatata aatcgtgcaa gcgttatttg atatttatgt tgtttgaaat ctttcagcaa
    22381 gcgtaggttg gattggaaat ccaacaatca aaatgccgtc tgaaaccgtg tttaattttc
    22441 agacggcatt tccttcattt gaaataggat attgagaact gagttcttca aaaatcctac
    22501 acctgctcct tccacggcag caccttggtc aaaacggcag acggctgaaa agcaaacacc
    22561 gtccgtcgtg ttgccgtttg cggatgagta cgggtcaacc ccaatgccgc cgaaaccgtc
    22621 gaagccgcct tcaacattgc cgccgccaaa gccgcaaagt tggcaaaaac ggtaaaaccg
    22681 gggagataaa agccgatggc aggaaagtaa atgtgaggat agacagtacg gaggcagacc
    22741 tgctttatcc ggcagggcaa taagaaaaca aaaattagat atggaaaacg attgtgtaaa
    22801 ccattacaat tttctaacaa taatcacaga ttttatgtgg acaaaatttg tgttaccgaa
    22861 caagatgtga acattttggc atccgaccga aattatgaat taaatattga aatatttatt
    22921 gacgatataa ttcattttca aataacagat gaatcttata aagtaaaatt ttcagaatat
    22981 ttattcgaaa ataaaacaga aaataattcg gatggaaatc ctactgcaaa ttattttttc
    23041 gagataatag atgacagtta tatggactgg ttgaaagaag aaagttttgg tttttttgaa
    23101 aagaaatatt ataaggctta cattttcttt tttagcgatt ctgtaataga agttatcagc
    23161 tcgacagaac ctgtatttta ttcaaaataa caaattatca aacaaagctc tgattaaaaa
    23221 cccaacaatc aaaatgccgt ctgaagcggt attcggcttt cagacggcat tttctccgat
    23281 tagcacagga tgccggggct tgccggcttg attttgccga aattgttggc acgcaattgg
    23341 gaggggcggc aacctatgga aaatagattt gaaaaaatcg ttaaggatat ttttagtttt
    23401 acccaatttg tttccgaagc agaaaatgag attcctaacc aatcctcccg ttattacgac
    23461 tgttggtggg aattggaaat cttgaatgct tccgcattgg aagattggga aatatcggga
    23521 aagcctgaaa aatgggagaa atggacagaa aaatatcaga ccgaagcgtt acagtcagtc
    23581 aagcatctat ttgccgaaga agttcctgaa aataatatag tttgcaatat ttctcatttt
    23641 ttgcattttg ccgatcgggc agaagccgac attcccaatc aatcacgttt atatgccgaa
    23701 tattggtggg aaatggaaat gttcaaaatg tcggttttag aagattggga acgctcggga
    23761 agaccgttaa attgggaaaa atggcaaagg caatatcgat cttaagcatt tgaattagtt
    23821 gaaaatttga atcaaagcaa acaagagtaa caagccgcag cctgcataag ggtttttaaa
    23881 gtacggcagc aaccgtagat taaattaaaa atcaaacaat caaagctcgt ctgatataat
    23941 cgatatattc tgttaaacga aaaataaata tgtttaaaaa attcaaaccg gtactgttgt
    24001 cattttttgc acttgtattt gccttttggc tgggaacggg tattgcctat gagattaatc
    24061 cgcgttggtt tttgagcgat acggcaactg aagtacctga aaatccgaat gcttttgtgg
    24121 cgaaacttgc ccgcctgttc cgaaatgccg acagggcggt tgtcatcgtg aaggaatcga
    24181 tgaggacgga ggaaagtctt gccggagctg tggatgacgg tccgttgcag tcggagaagg
    24241 attatctcgc gctcgctgtc cggctcagtc gtttgaaaga aaaggcgaaa tggtttcacg
    24301 taacggagca ggaacatggg gaagaggttt ggctgaatta ctatatcggc gagggcggtt
    24361 tggttgcggt ttcgcttttg caacgctcgc cggaagcgtt tgttaatgcc gaatatctgt
    24421 atcggaacga tcgtccgttt tctgtaaatg tgtacggcgg aacggctcac ggggaaaatt
    24481 atgaaacgac aggagaatat cgggttgttt ggcaaccgga cggttcggta tttgatgcgg
    24541 cagggcgcgg gaaaatcggg gaagatgttt atgagcattg cctcgggtgt tatcagatgg
    24601 cccaggtata tttggcgaaa taccgggatg tcgcgaatga tgagcagaag gtttgggact
    24661 tccgcgaaga gagcaaccgg attgcatcgg actcgcgcga ttatgtgttt tatcagaata
    24721 tgcgggaatt gatgccccgg gggatgaagg caaacagtct tgtggtcggc tatgatgcgg
    24781 atggtctgcc gcagaaagtc tattggagtt tcgacaatgg aaaaaaacgc cagagtttcg
    24841 aatattattt gaaaaacgga aatcttttta ttgcacaatc ttcgacggta gcattgaaag
    24901 cggatggcgt aacggcggat atacagacct atcatgcgca acagacgtgg tatttggatg
    24961 gcgggcggat tatccgcgaa gagaaacagg gagacagact gcctgatttt cctttgaact
    25021 tggaaaattt ggaaaaagag gtgcgccgtt atgcagaggc tgcggcgaga cgttcgggcg
    25081 gcaggcgcga cctttctcac tgaacgcaaa tgccgtctga aaccggtttt cagacggcat
    25141 tggagagtca aacgcttttt gcaatgccgt atatgccgaa tccgattcgc tacaaattga
    25201 aaacaacaat ccaaaaaacg gaaatacaca ttaaacgggt ctttttaccg accgtatcat
    25261 cccataggtt ttccacacct tttttcatcc ataaattcaa accatttaag tttgcatcct
    25321 taccgacaat tgcagcagca tcatccgcat aacggtcacc caaattagcc aaataacgcc
    25381 aaccgccata ggtatcgcca cggaaagcat aaccacgcaa ggtttggatt tgttctggta
    25441 ttaaaacaac ttcaccctca ttcataataa gatcctttaa attatttttt acttggattg
    25501 tttacaaaa
//
LOCUS       DAWGBY010000015        24829 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.015, whole genome shotgun sequence.
ACCESSION   DAWGBY010000015 DAWGBY010000000
VERSION     DAWGBY010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24829
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.015"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(91..1038)
                     /locus_tag="WHG62_000567"
     CDS             complement(91..1038)
                     /locus_tag="WHG62_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ1724725.1"
                     /translation="MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(1053..1460)
                     /locus_tag="WHG62_000568"
     CDS             complement(1053..1460)
                     /locus_tag="WHG62_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ1724726.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIITHP"
     gene            1541..2200
                     /gene="ung"
                     /locus_tag="WHG62_000569"
     CDS             1541..2200
                     /gene="ung"
                     /locus_tag="WHG62_000569"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ1724727.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKRKLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            complement(2708..3223)
                     /locus_tag="WHG62_000570"
     CDS             complement(2708..3223)
                     /locus_tag="WHG62_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724728.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILETELSNERKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(3289..3702)
                     /locus_tag="WHG62_000571"
     CDS             complement(3289..3702)
                     /locus_tag="WHG62_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ1724729.1"
                     /translation="MPSDKEARAGCLSLPANNGIIRALSPPFTGINIRLFAALGLLSL
                     SGAAAQASVYHCNSNGKSVYTSAPAGSCADADLPKISSHQGGGYRLKIKKLSQEAKIH
                     IESKKKNKKPAGKKNRQAAKAPKENQKQPTEKKSP"
     gene            complement(3689..5608)
                     /locus_tag="WHG62_000572"
     CDS             complement(3689..5608)
                     /locus_tag="WHG62_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ1724730.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGHRVGLIGKNGTGKSSLF
                     ALIKGKITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKFTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPKVREQEIRNFLGGFNFAGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRAE
                     KEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQEE
                     LERIETEIEKQFAER"
     gene            complement(5685..6080)
                     /locus_tag="WHG62_000573"
     CDS             complement(5685..6080)
                     /locus_tag="WHG62_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEZ1724731.1"
                     /translation="MMRRRGKKMLFEENPIDGHFTEYGHRSGEIRLAGQSFHKPVLVH
                     KDSVCLSQCRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGIG
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            6253..7560
                     /locus_tag="WHG62_000574"
     CDS             6253..7560
                     /locus_tag="WHG62_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ1724732.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAAEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVAREDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFSLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            7553..7987
                     /locus_tag="WHG62_000575"
     CDS             7553..7987
                     /locus_tag="WHG62_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724733.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLALTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLAVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(8046..8315)
                     /locus_tag="WHG62_000576"
     CDS             complement(8046..8315)
                     /locus_tag="WHG62_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ1724734.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(8497..10947)
                     /gene="lon"
                     /locus_tag="WHG62_000577"
     CDS             complement(8497..10947)
                     /gene="lon"
                     /locus_tag="WHG62_000577"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ1724735.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIETVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DSKTKKTGKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVGGELL
                     TVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIHVHVP
                     EGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAL
                     RGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEPSGAE
                     AAAESASKPKPRSRATKH"
     gene            11032..11223
                     /locus_tag="WHG62_000578"
     CDS             11032..11223
                     /locus_tag="WHG62_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide synthase"
                     /protein_id="HEZ1724736.1"
                     /translation="MEFDAMPSETFRLQTAWAWKDKAGTKNCSVLPLLAVPSVWFAVL
                     PPYFQNMTQVFHVFFYFSR"
     gene            11198..12301
                     /locus_tag="WHG62_000579"
     CDS             11198..12301
                     /locus_tag="WHG62_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ1724737.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWHYVRESGANGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQAGLRVADVL
                     KTKPVHKKAADPNNPLAFARNRETTFLYRLKKA"
     gene            complement(12373..14118)
                     /gene="recD"
                     /locus_tag="WHG62_000580"
     CDS             complement(12373..14118)
                     /gene="recD"
                     /locus_tag="WHG62_000580"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ1724738.1"
                     /translation="MERQTDEFAQAAARAAIRFLEHYAGSGDEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEEAFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(14186..14881)
                     /gene="lolD"
                     /locus_tag="WHG62_000581"
     CDS             complement(14186..14881)
                     /gene="lolD"
                     /locus_tag="WHG62_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ1724739.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLNQRRLGDLRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSREEAAEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(14874..16121)
                     /locus_tag="WHG62_000582"
     CDS             complement(14874..16121)
                     /locus_tag="WHG62_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ1724740.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSRRASKTQPAEALRYE"
     gene            16325..16603
                     /locus_tag="WHG62_000583"
     CDS             16325..16603
                     /locus_tag="WHG62_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724741.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSGSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(16659..17276)
                     /gene="recR"
                     /locus_tag="WHG62_000584"
     CDS             complement(16659..17276)
                     /gene="recR"
                     /locus_tag="WHG62_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ1724742.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(17343..18881)
                     /locus_tag="WHG62_000585"
     CDS             complement(17343..18881)
                     /locus_tag="WHG62_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ1724743.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAMQNEQADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(18936..19310)
                     /locus_tag="WHG62_000586"
     CDS             complement(18936..19310)
                     /locus_tag="WHG62_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ1724744.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEICS
                     WLEQVPLATLLNKRGTSWRKLDAGTQQKVLSSTAEAVKLMSEMPSLIKRPVLECGGRV
                     YVGFSEETYDGIFNRQALCRQG"
     gene            19460..21088
                     /locus_tag="WHG62_000587"
     CDS             19460..21088
                     /locus_tag="WHG62_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ1724745.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     PQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            21160..22413
                     /locus_tag="WHG62_000588"
     CDS             21160..22413
                     /locus_tag="WHG62_000588"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ1724746.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQELAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PMREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
     gene            22636..22944
                     /locus_tag="WHG62_000589"
     CDS             22636..22944
                     /locus_tag="WHG62_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724747.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            23026..24057
                     /gene="ruvB"
                     /locus_tag="WHG62_000590"
     CDS             23026..24057
                     /gene="ruvB"
                     /locus_tag="WHG62_000590"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ1724748.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(24080..24808)
                     /gene="rpe"
                     /locus_tag="WHG62_000591"
     CDS             complement(24080..24808)
                     /gene="rpe"
                     /locus_tag="WHG62_000591"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ1724749.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
BASE COUNT         5627 a         6788 c         6463 g         5951 t
ORIGIN      
        1 tttgaagcgg aatacaacct tgcccgggtt taaataaaaa tgccgtctga accccgaaaa
       61 cagagcttca gacggcattt tcatcacggc ttatttggcg gttttgctgc tgtcgataat
      121 tttcataccg gcagaaatca ggctgccgat gtcggcaaca ttggcgggca taatcagcgt
      181 attgctttct ttggcaagat tgttgaacgc ggcgacgtat tgttccgcaa tcttcagatt
      241 gaccgcatcc gcgccgcctt gggtttgaag ggcggcggca atttgacgga tggcttcggc
      301 attggcttcg gcaacaaggc gcagggattc cgcttcgcct ttggcgcggt tgatgcgggc
      361 gattttctcg gcatttgacg cattgaccgc agcctgagcc tcgccttcgg attgttggat
      421 ttcggcttcg cgctgaccac tggcaaggtt gatttgttcg attttacgac cttcggattc
      481 ggcgatacgg gcgcgttttt cgcgttcggc agtaatttgc gcctgcattg agcgaaggat
      541 ttcttgcggc ggaaccaagt ctttaatctc ataacgcaaa accttcacgc cccaagctcc
      601 ggcggcttca tcgagggcgg agacgacggt gctgttgatt tcgtcgcgtt cttcaaacgt
      661 tttgtccaac tccatacgcc cgataacgga acgcagcgtc gtttgggcaa gctgagtaat
      721 cgccataatg tagttgctcg aaccgtatga ggcgagtttg gggtcggtta cttggaaata
      781 gatgatgccg tcaacagtca gctgcgtatt gtcgcgcgtg atgcagacct ggctgggtac
      841 gtctaaaggg atttctttca gcgaatggcg gtaggcaacg cggtcgataa agggaatcaa
      901 aatattcaaa ccggccgtca gggcgcgatg gaaacgcccg agcctttcga caacgtggac
      961 ttcctgttgt gggatgacaa caaaggattt gaaaccgaaa acggcgacgg ctaccaacaa
     1021 gataatgaaa aattccataa ttcctccgag tgttaagggt gtgtgataat aagaaggttg
     1081 ccttccttgc ggacaatgag ggcgcgcgtt cctggttcaa gctcttcttg ccccgtattt
     1141 tgcgcctgcc agtgcgtacc gcgataaaaa acttcgtaac ggttgccgcc tgtgtgtcgg
     1201 aggatttcga catattgtcc ggcatccaaa tcctgatatg aatccgtttc aacttttcta
     1261 acggcggttt tggcgtgtac gaaccaaata cccagcgcgg aaagcagagc ggcggtcaag
     1321 acggcggcag gcgtgctgcc ggtcagcccg taagcaatgc ccgaacccgc caaagccgcg
     1381 ctgacaacca aaagataaac cgttcccgtc aataattcga tgattaagac ggcaacagcg
     1441 gcaacaaacc atacagtcat acatttcccc acaaagcgcg tcgtttgaca aaataacgca
     1501 atatcagcag tatagccgaa tttgaaagga tagggcagat atggacactt ggcacgatgc
     1561 actcggcggc gaaaaacagc agccgtattt tcaggaaatt ttaaatgcag tcaggcagga
     1621 acgtttgtcg ggacaaatca tctatccgcc ggcggcggat gtgttcaacg cattccgcct
     1681 gacagcgttc gaccgggtca aagccgtcat tctcggacaa gatccgtatc acggggcagg
     1741 gcaggcgcac ggtttggcat tttccgtccg gcagggtatc cgcataccgc cgtctttact
     1801 caatatctac aaagaattgg aaaccgacat cgaaggcttt tccatacccg cgcacggctg
     1861 cctgacagcg tgggcggagc agggcgtatt acttctgaac acggttttga cggtgcgtgc
     1921 aggacaggcg cattcgcacg cccttttagg ctgggaacgc tttaccgata ccgtcatcag
     1981 gcagcttgcg acacaccgca agcatcttgt ctttatgctg tggggtgggt atgcacaaca
     2041 aaaaaggaaa ctgatagaca gtcaaaacca tttgatattg accgcaccgc atccgtctcc
     2101 tctgtcggca tatcgcggtt ttttcggctg ccgccatttt tcacaggcaa acagctattt
     2161 gagccggcac ggtatcgatc cgataaactg gaagctgtga atgccatctg aatgccaagt
     2221 tgcttaaacc ccactgaagg ctgcttttga aaccggaaac aaagtgatta aggaaaaccg
     2281 gcccataatg caaaaccgtc tgaatcctag ggttcagacg gcattttttg ccgccatttc
     2341 caaaaacaac ttttgttcgc ctgccgacaa atccgacaaa gtcgtttggt tgagggcttt
     2401 ggcaataatt taacataata tatattatgc gaactatcgg aaacagttgt acgtgtccct
     2461 gtggtctttc caagtaggaa aattaaagta tggccaatgc ggctgaatgt atagcccgga
     2521 gcatccgcgt atccgaaggt actgaacgac atgccctgca tccctttcga cgcttccatc
     2581 cagccggtat tgggaaatac gttgaccttc aatataatat acaggcagcc gacacacagg
     2641 atatgccgct gctttttcat catttcttct gtcaaatcct tggaacggtc gatttgaaaa
     2701 cacggcttta catacgcccc agttcccttt gcagggcttg aatattttgc tgcctgtcca
     2761 atacattgct ttgtaatgca tttatttctt gatggttgat gttgccgccc tttgccagac
     2821 gtgcttgtga taacattttt tgggcttcaa ccaatgcttt gcgttcgttg ctcaattctg
     2881 tttcgagaat ggagcgtctg ctgttgtttg agggtgcttg ttgcggcggc ggcgtattgg
     2941 attttgccgg cttggatact gttttgaccg gggctttata tttgacaacc tgtccgccgt
     3001 ttgacggtga tgataccggt tcgggcgttt ggggcgggat atagcgttcg ctgctgtagt
     3061 tgccgattgg gggcaaatcg gttgagtggc agcttttgga cggcttggtg gtgtaaacgg
     3121 tttctccgtt gattgtgcag gtgtagattt tggccgcatt cgcacccaat gggcttgaaa
     3181 tcagggaaaa gttgattagg attaagggga gttttgattt cataatgtgc ttgattttcg
     3241 gataatcatt tgattttttg gtatttttta taatgctttc ttggcgtttt acgggctttt
     3301 cttttcggtt ggttgctttt gattttcttt cggggctttg gcagcctgcc tgttcttttt
     3361 cccggcaggt tttttgtttt tctttttact ttctatgtgt attttggctt cttgactgag
     3421 ttttttaatt ttcaggcggt atccgcctcc ctgatggctg ctgattttag gtaaatccgc
     3481 atcggcgcac gatcctgctg gggctgatgt atatacgctt ttgccatttg agttgcaatg
     3541 gtatacggag gcttgcgccg ccgcgccgga aagggacagg agacccaagg cggcaaaaag
     3601 tctgatgttt ataccggtaa aaggcggtga taacgcccga attataccgt tattggcagg
     3661 caaagataag caccctgccc gcgcttcttt atcgctcggc aaactgtttc tcgatttcag
     3721 tttcaatccg ttccaattct tcttgacaag ccagccaaac ctcttcgatt tgggcaagtt
     3781 gtgttttgac ttttgccagc tgggataagg tattttgcaa tttttctttg tttgcttcaa
     3841 ggtaagcgtc ttcttgtgct aaaaatgctt cacatgccgt ctgaatttcg gaaagctgcg
     3901 ccatttcttt ttcggcacgg tctattttct gctgtatcgg cttgccgcgt cgggcttttt
     3961 cctgacggat ttgcgcttcg atgcgcttgg tgtctttgcg gctttggctt tgtgcggatg
     4021 ctgctggtgc ggcggcgttt tcctgtgcca aacgccattg gcggtaatcg ttcaaatcgc
     4081 cgtcgaagtt cttcagacgg cctttgtcga tcaggaggaa gctgtcggta gtcgcttcaa
     4141 gcaggctgcg gtcgtgcgat acgatgatta aggcgccttg gaaactttgc agagcgagcg
     4201 tcagggcgtg gcgcatatcc aagtccagat ggttggttgg ttcgtcaagc agcagcaggt
     4261 tcggcttttg ccagataatc atggcgaggg cgaggcgggc tttttctccg ccggaaaaag
     4321 gttcggtttt ctgcaacgcc atatcgccgg caaagttgaa gccgccgagg aaatttcgga
     4381 tttcctgttc gcgtactttg ggagaaagct gctggatatg ccaaacaggg ttttggtcgg
     4441 cgcggatggt atcgagttgg tgttgggcaa aatagccgat attgagtttt tcggaacgga
     4501 cgatgctgcc ggaaagtaaa tcgattttgc ccgccaaggc tttgataaag gtagatttac
     4561 cgctgccgtt gacacccaat agcccgtagc gtgcgccgct ttccagcgac agggtaatgt
     4621 catgcagaac ggttttgcct tcgtaaccca aatcagcgtg ttctagcttt aacaaaggat
     4681 tgggcagatg atcgggatgg taaaactcaa aggaaaactc gctgtccaga tgcgcgggcg
     4741 caacgcgttc tagctttgcc aaagccttca tgcggctttg cgcttgaacg gctttggtgg
     4801 ctttggcttt gaagcggtcg ataaaggatt gcaaatgttt gatttgcgcc tgctgtttga
     4861 cataggcagc ttgttgttgc gcgagacgct gcgcgcgttc gttttggtaa aaatcgtaat
     4921 tgccgccgta ttgcgtgaat ttttgctgcg ataattcaat ggtttgggta gttgccgcgt
     4981 tgagaaaatc gcggtcgtgg gaaatgatga tttgcgtgca gggtaaagaa gcaagatggt
     5041 tttccagcca caagacggtt tccaaatcca agtggttggt cggttcgtcc aaaagcagca
     5101 aatcggcgcg gcaaatcagg gcttgggcga gattgaggcg catacgccag ccgccggaaa
     5161 aggatttgac ggggcggctg tgttcttctt gtgaaaaacc cagcccgttc aacaattttg
     5221 ccgcgcgggc cggcgcggta taagcgtcga tttcttccaa tttggcatga tattccgcct
     5281 gcttcatgcc gtcattttgc gcttccgcct gcctcaatgc cgtctgaaaa gcctgcaact
     5341 cggcatcgcc ctgcaaaacg taatccaaag cggaaatatc caaatcgggc gtttcttggg
     5401 aaacggaagc gagccgccag tttttcggaa tcgagacatc gccgccgtcc tgagtgattt
     5461 tacccttgat taaggcaaac aggctcgatt tgcccgttcc gtttttgccg atcaaaccga
     5521 cgcgatgacc gggattgacg gtagcgttgg ctttgtcgag caggactttc aaaccgcgtt
     5581 gcagggtgag gtttttgatt tcaatcataa cggaaacatc gtcgggcgga aaaagcccgt
     5641 attttacctg aaagtcagtg ccgatgccgt ctgaaatggg aaatttacgg ctgaagccaa
     5701 gcccaagccc tgcgcccttc cgagtgcagg aaaaccaatg tcctgaatgc cgaatcggta
     5761 ttcatacatt ccacgccgat tccgattcga gaaaaatccg ccatgatttt gggatggata
     5821 aactcctgag ccgcgcccgt cccgataatc aatatttccg gatagtcaac aggtttgatg
     5881 tcggacaaca ggttttccgg agtcagatcg gacaaggttc ggcattgcga caggcagacc
     5941 gaatccttat gtacaagcac gggtttatgg aaactttgac ccgccaatcg gatttcaccc
     6001 gaccggtggc catactctgt aaaatgtccg tctatcggat tttcttcaaa caacattttt
     6061 ttaccccgtc gccgcatcat ctacaccgaa aggggtgcaa aatcaggcga attcatgtag
     6121 gattggcaga tttcatctga cccgcctgcc gatttcagac tgcatttgat tcaaagtgcg
     6181 gcacaattat atcggcagcg gatattttcg tctttcaata tttacatttc agtcggctta
     6241 caaggagaca caatgaagcc agtaaacatc ggtcttttag gtttaggtac ggtcggcggc
     6301 ggtacggctg ccgtgttacg ggacaatgcg gcggaaatca gccgccgttt gggacgcgaa
     6361 gtgcgcatca gtgccgtatg cgacttgagc gaagaaaaag cccgccaaat ctgcccgtcc
     6421 gcagcctttg tcaaagaccc gttcgaactg gtcgcgcgtg aagacgtcga tgtcgtcgtc
     6481 gaattgttcg gcggtaccgg cattgccaaa gatgcggtgt tgaaagccat tgaaaacggc
     6541 aaacacatcg ttaccgccaa caaaaaactg ctcgccgaat acggcaacga aatcttctcg
     6601 ctggcggaag aaaaaaatgt catggtgcaa tttgaagccg cagtagcggg cggtatccca
     6661 atcatcaaag ccctgcgcga aggtttggca gcaaacagga ttaaatccat cgccggcatt
     6721 attaacggca ccagcaactt catcctctcc gaaatgcgcg aaaaaggcag cgcgtttgcc
     6781 gatgtactga aagaagcgca ggcattgggt tatgccgaag ccgatccgac cttcgacatc
     6841 gaaggcaacg atgcgggcca taaaatcacc atcatgagcg cactggcatt cggcacgccg
     6901 atgaactttt ccgcctgcta cctcgaaggc atcagcaaac tcgacagccg cgacatcaaa
     6961 tacgccgaag aacttggcta tcgcatcaaa ctgttgggca ttacccgcaa aaccggcaaa
     7021 ggcatcgagc tgcgcgtcca ccctaccctg attcccgaaa gccgcctctt ggcaaacgtc
     7081 aacggcgtga tgaacgccgt gcgcgtcaac gccgatatgg ttggcgaaac cttatattac
     7141 ggcgcgggcg cgggcgcatt gccgaccgct tccgccgtgg ttgccgatat catcgacatc
     7201 gcccgcctgg ttgaagccga taccgcccac cgcgtaccgc atctggcgtt ccaacccgcg
     7261 caagtccaag cgcaaaccat cctgcctatg gacgaaatta ccagcagcta ctacctgcgc
     7321 gtccaagcca aagacgaacc gggcacgctg gggcaaatcg ccgcgctgtt ggcacaagaa
     7381 aacgtgtcca tcgaagcact gattcaaaaa ggcgtgattg atcagaccac tgccgaaatc
     7441 gtgattctga cccacagcac ggtcgaaaaa cacatcaagt cggcaatcgc agccatcgaa
     7501 gcactggatt gcgtggaaaa accgattacc atgatccgca tggaaagcct gcatgactga
     7561 gccgaaacac gaaatgccga cggaagagca ggttgccgcg cgcaaaaaag caaaagccaa
     7621 aatccgcacc atccgcattt gggcgtgggt cattttggcg ttgctcgctt taaccgccct
     7681 gctctcccaa tgcgcgatgt ccaaaccgca ggcaaaacag aaaattgtcg agtcttgcgt
     7741 gaagaatatt ccgtttgccg aaaaatggca aaacgatttg cgggcccgcg gtttagattc
     7801 aaacaatacc cgcctcgccg tcgactactg caaatgtatg tgggagcagc ctttggacag
     7861 attgagcgag aaacagatta gatccttcgg caaactcggc gcacaagaac agcttgacct
     7921 gctcggcggc gcaaatgcct ttgaagcacg tgacaagcag tgtgttgccg atttgaaatc
     7981 agaataatgt ggaccgataa aaaagccgat tctttaaaga atcggctttt ttcataaaaa
     8041 acggcttaca gtgcgtcttt caatgcttta cctgcacgga atttaggcgt tttggcggcg
     8101 gcaatggtca gaggctcgcc ggttttgggg ttgcggcctt ggcgttccgc acgttcgccc
     8161 acgtagaaag taccgaaacc gaccaaagta acggtgtcgc cttgtttcag ggcggtggtt
     8221 actgcattgg tagtggcatc caaagctttt tgtgcggcgg ctttggaaat gtcggcttct
     8281 tgagcaatcg cttcgatcaa ttcagacttg ttcacaatca gtcccttcct gtcttaaaaa
     8341 atgatgaaat gcccgaatac tcggggtttg tactgcttga gcaactttcg ctttatagca
     8401 attctgaaat tgccgtgtca agcaaaaaat acggaatcac cctatttgac aggctttcag
     8461 gacgaaaccg catttttaca acacatttcc tgcgtttcaa tgtttggttg ccctgctgcg
     8521 gggttttggt tttgaagcgg attccgccgc cgcttccgca ccagaaggtt ctgcccaagg
     8581 ctcaggctgg ctttccaaac ccagagccaa tacctcgtct atccatttga ccggatggat
     8641 ggtcaggccg gttttcacgt tttcagggat ttcttccaag tctttgaggt tgtcttttgg
     8701 aattaaaacg tgtttgatgc cgccgcgaag cgcagccaac agtttttcct tcagaccgcc
     8761 aatcggcagg acttcgccgc gcagggtaat ttcgcccgtc atggcaacat cggcgcgcac
     8821 cgggattttg gtgaatgcag acaccatcgc caaagtcatg gcaatgcccg cactcggacc
     8881 gtctttcggc gtcgcacctt cgggaacatg gacatggatg tcttttttct cgtaaaaatc
     8941 aggagccaag cccactgatt ccgcgcggga gcggacaacc gaccacgctg cggacacgga
     9001 ttccttcatc acatcgccca actggccggt gcactgaatc acgcccttac ccggcaatgc
     9061 tgcggcttcg acggtcagca attcgccgcc gacttccgtc cacgccaaac cggttacttg
     9121 tccgatacgg ttttcgcttt cggcaacgcc gtaatcgaag cggcgcacac ccaaatagtc
     9181 gtgcagattt ttctcattta ctttaaccgc cctgggcttg gcttttccgg tttttttggt
     9241 ttttgagtct tcgtccaagg taatctgcat caccaccttg cggcagattt tggcaatctc
     9301 gcggtcgagc gaacgcacgc ccgcctcgcg ggtgtagtaa cggataatat cgcgcaccgc
     9361 gctttcttcg attgccaatt ccccttcttt tacgccgttg cgcttcattt gcttcggcac
     9421 gaggtactgc atcgcgatat tgattttttc gtcttcggta tagccggaca gacggatgat
     9481 ttccatacgg tcgagcagcg gtgtcgggat attcaggctg tttgaagtcg caataaacat
     9541 cacatcgctc aaatcgtaat ccacttcggc ataatgatcg gcgaacttgt tgttttgctc
     9601 gggatcaagc acttcgagca acgcgctggc gggatcgccc cggaagtcgc tacccaattt
     9661 gtcgatttcg tcgagcagga acaatgggtt ttttacgccg gcttttgcca tattctgcaa
     9721 aatcttaccg ggcatggagc cgatataggt gcggcggtgt ccccggattt cgctttcgtc
     9781 gcgcacgccg cccaaagcca tgcggacata tttccgcccc gttgctttgg cgatggattc
     9841 gcccaaagag gttttgccca cgcctggagg gccgaccagg cacagaatcg ggcctttgag
     9901 tttgtccata cgtttttgga cggcgaggta ttccaaaatc cgttctttga ctttttccag
     9961 gccgtagtgg tcggtatcca gcaccaatcc ggctttggcg atgtctttgc tgacgcggga
    10021 ttttttcttc cacggcagtt cgagcagggt gtcgatgtag ttgcgtacga cggtggattc
    10081 ggcagacatc ggcggcatca ttttgagttt tttcagttcg gacaggcatt tttcttccgc
    10141 ttctttgctc atccccgcct ttttgatgcc tgcttccaag gcatccagtt cgccgttttc
    10201 gtcttcttcg cccaattctt tgtgtatcgc tttaatctgt tcgttcagat aatattcgcg
    10261 ctgggatttt tccatttggc gtttgacgcg tccgcgtatg cgtttttcgg cctgcataat
    10321 gtcgagttcg gattccagct gtgccagcag gaattccatc cgtttgccga tttcgggaat
    10381 ttccaaaatc tgttggcgtt gcgccagttt caactgcaaa tgcgctgcga ccgtatcggt
    10441 tagccggctg ttttcggcaa tgccgttaat gctgccgata atttcggcgg ggattttttt
    10501 attgagtttg gcgtattgtt caaactgcgc caacagggtg cggcgcacgg cttcgaggtc
    10561 ggtattgccg cccgtgtctt cttccacgac cgtctctata tgggaaacga acagaccgcc
    10621 cgtgtcttca atggtcagaa cacgtccgcg atacagccct tcgaccaata cttttaccgt
    10681 gccgtcgggt agtttcaaca cttgcaggac ttgtgcgacc gtaccggtct gatacaggtc
    10741 ggcggcaacc ggttcttcta gcgccgcatc ggtttgcgcc aacaggaaaa ccggctcctc
    10801 gcgggtaatg gcgttttcca gtgcggcgat ggatttcggc ctgccgacaa acagcggcag
    10861 aaccatatgc gggtaaacga cgacatcccg caaaggaagg gttgccaagg cggcatattc
    10921 ctcaaaatgc ttttcttttt gtgtcatagg tactctcttg tgtctgacag attgccgatt
    10981 ttcgcgtaca ttggggttga aggtattatt tcaagcatat gtggtttatt tatggagttt
    11041 gatgcgatgc cgtctgaaac attccggctt cagacggcat gggcttggaa agacaaggcg
    11101 ggaacaaaaa actgttctgt gttgccgctc cttgctgtac catccgtatg gtttgcggtt
    11161 ctgccgccct attttcaaaa catgacgcag gtattccatg tcttctttta tttttcccga
    11221 taacgggttc gaatggcgca acgaaagtct gcaaaagccg cccaaaggtt ggcattatgt
    11281 ccgcgaaagt ggtgcaaacg gcattttgaa ggctgcctat caaaatattg caactgtctg
    11341 gcagggcgat ttccacaatg ccaaacaggt gctttccgca atgaagaaga aggtccgcaa
    11401 acctgccgcc gtccgttccg atgcggatat cgccgccctt ttccacgccc accgtatgaa
    11461 gcaggcgcag cagagccgta ttctgaatat gcttgccgtt gaaatccgcc ccggttttgt
    11521 gttggacaac aaacgcgcgc ccgatatacg cgccgccctg ctcgacgtgt acggagaggc
    11581 ggacggcaaa ccgtttttcc tgccgctcaa tctgctgctg gggtttatgg gtgcgcacga
    11641 gtggcataag aaaggggttg ccgttccgca gctgggcggc agcatacacg ttcctttcgg
    11701 cgtattctcg ccgttgcgcg gcgaatacct cgacctgctc gcccatgcgc cgtcaacggg
    11761 ttttcagacg gcattcgata tcgggacggg ctcgggcgtg cttgccgcca ttttggcgaa
    11821 acagggcatt ccttccgtca tcggcacgga taccaatccg aaagccgtcg cctgcgcccg
    11881 tgccaatatt gcccgtttgg gctttgaaaa acaggttgag atacgggaaa ccgatctgtt
    11941 tcccgaaggg tttgccgatc tgattgtctg caatccaccc tggcttcccg ccaagccgac
    12001 ttccgccgtc gaatccgcgt tatacgaccc cgaatctgcg atgctggctg cgtttttgcg
    12061 ggatgcgccg aaacatctga atcccgacgg agaaatccgc ctgatcattt ccgatcttgc
    12121 cgaacatctg cacctgcgtc cgtccgattt tctggataag gcatttgctc aggcgggttt
    12181 gcgcgttgcg gatgttttga aaaccaaacc ggttcacaaa aaagctgccg atccgaacaa
    12241 tccgctggct tttgcccgaa acagggaaac tactttcctg taccgtttga aaaaggcata
    12301 aggggcggcg gtgcgcttcc ggcggcaggc atcggaacgc ccgcgccgcc ggcacggcat
    12361 cattcgggcg gattattctt gtgaaaatac ccgctcgagc atactgccca atgccgtctg
    12421 acgcgttttg acggtggcgg cagcttgccg gaaggcttct tccccgccga agaatacgaa
    12481 cttctctctc gcgcgggtaa tggcggtata taacagctcc ttactcaatc cggacaatgc
    12541 atcgtcccct tcgtccgaag gtgcggcgga aggcggcagc agccatactt cccggtattc
    12601 cgaaccttgg cttttgtgga cggtcatggc gaatgcgggt tcaaattcgg gcaggcagct
    12661 taccgctacc tttttaaatc cgtccgcatc ggcaaaatag gcggcaaggc tgccctgccg
    12721 tccgacatct tccataatca gtccgatgtc gccgttgaac agttcaagcg cgtagtcgtt
    12781 ctgcctgatc ataatcggct ctccggcaaa atatgccaaa tgttccggta tgttcatttt
    12841 gcggcgtaca tggcggcaat aggcttcgtt gaagtcttcc gcatcctgcc gccaagctgc
    12901 cagaaccacg atatccgaaa tgcccgcgta tgcggcttcg atattgccgt cttttaccgc
    12961 ctgccaatag gctttgtgtg cccggtacaa cctttcgact cgagcgttcg gactgcattc
    13021 cgaatgttcc agttcgtccg gaaaccggtc aaacaatgcc cacgcccctt catcgcccga
    13081 tacggcggca cgggcaaggc agccgatgcc gctgttgtcg ccgaagcggt ggctgaacga
    13141 cagatgggcg gtgttttgcg ccaacacggg tggatttgcg ctgacgctga aaccgtgttc
    13201 cggaaggaag ccggccagcc tttggtgcgt ttctccgtcc aaaacggttt tttgtgacaa
    13261 aacggacagc accgccccta ttccgacgga cgggagctgg ttttcatccc ccagcagaat
    13321 cacgcgcgcg ccggttttga ccgcttttaa aagttgcagc atcaatgccg tatccagcat
    13381 agaggcttca tcgataacca atacgtcaaa cggcagcggg taaacagggt tgaacgccgc
    13441 ctgcattttg ggcgggcgca gcttcagcag tcggtggacg gtctgccctt ccagtttgag
    13501 caaatggcgg cggacggcct ccggcgcgtc aaaaccgttg attgcacggt gcagcgcgcg
    13561 cgccatatgt gccgccgctt tgcccgtcgg tgcggcaagc gcgatgttgg gaagattttc
    13621 gtcttcaccg caaatcagcg ccagcagttt ggcaaccgtt gtcgttttgc ccgttcccgg
    13681 cccgccggta atcaccataa aagactgcaa cagtgccaag gcggcggcat cgcgctgccc
    13741 ttcgctgccc gtgccttgaa accattttgc gaggttttgc ctcgcgcctg ccgcgtcggg
    13801 ggcggacgtg tcggctgccg ccaagcgttt tatctcggca gccaaatcgt attccaactg
    13861 ccacatcctg cccaaaaaca gccttctgcc ttccaaaatc aaaggcgcgg cggatgttcc
    13921 gacaacgggt gcgagtgccg acagcgcgtc agcctcgcca ccgctcaaac ggataaacga
    13981 atgaccgttt tgcaatgcct gaaacaggcg ttcggtgcag tttgcaagca cttcgtcgcc
    14041 ggaacccgca tagtgttcca aaaaacggat tgccgccctt gccgccgctt gggcaaattc
    14101 atctgtctgc cgttccattt tattccttat ccaaatgccg tctgaaggcg tggggcttca
    14161 gacggcgcgg tgttgtttcg gctgtttagg cgtttgcgcc ctgtttgggg tgcaggctgc
    14221 cgtctttcat gaccatcacg cgctcgaagc ggccggcgag ttcgtcgtcg tgcgttacga
    14281 ccaccagccc cgttcccaat tctgttttca gttccagcat catatccaaa acattcctgg
    14341 cgttcgcacg atcgagattg ccggtcggtt cgtcggcaag caggcatttg ggttgggtaa
    14401 ccaaggcgcg tgcaatggcg gcacgctgcc gctcaccgcc tgaaagttcg cccgcgcggt
    14461 gcgtcgaacg gtgtttcagt ccgacctttt ccagcatcgc cattgccgcc tccgcagcct
    14521 cttcacggct ttttttgccg atcagaagcg gcatcatcac attttccagt gccgaaaatt
    14581 caggcagaag atggtggaac tggtacacga aaccgagatg gcggttacgt aaatcgccca
    14641 aacgccgctg gtttaaggta cgcaaatcct cgcccatcag cagcaccctg ccttcagacg
    14701 gcatatccag cccgcctaga atatgcagca gcgtcgattt tccgctgccc gaagaaccga
    14761 tgatgccggt gctttccccc gcgcggattt ccaaatccaa gccgtgcagc acccgaacgt
    14821 ccaaaccgcc gtcccgatag cgtttgccca cgccttcgca tttcaaaatc aactcactca
    14881 taacgcaaag cctccgccgg ttgggttttt gacgcgcgcc ggctcgggta gagcgtggca
    14941 acgaaagaca gtcccaaaga aatgcaggca atcagggcaa cgtcgcccat atcaacatcg
    15001 ctgggcaggt agtcgataaa ataaacctgc gaattgataa ggtggacacc gagcaggttt
    15061 tcaaaaaacg ccacgaccct gccgacgttc caacccaaaa gcacgccgca gaccacaccc
    15121 gccagcgtgc cgaaaaagcc tgaaaacgcg ccctgcacca taaaaatctt catcacgccg
    15181 ccaggggaaa gacccaaagt ccgtaaaatc gcaatgtccg cctgcttttc cgtaaccgcc
    15241 atcaccaagg aagagacaag gttgaacgcc gccacggcga taatcagcgt caggatgatg
    15301 aacatcatcc gtttttccaa ctcgaccgcc tcaaaatagc ttcgattgct gaacgtccaa
    15361 tcgcgcaccc aaaccgtatc cctttgcgcc tccggaatca gtgttgccgt caaggcgggg
    15421 gcgttttgcg ggtcggcgag tttcagccgc agccccgcaa cttccttatc caagcggtac
    15481 agtacgcgcg cgtcttggat atgcgtcatc gccaatgagt tgtccacttc gtaaacgccc
    15541 gtcttaacca gaccgaccac ggtaaactgc ttcaggcgcg gcacgactcc ggcaggggta
    15601 acgttgccct ccggcgtgat gacggtaact ttattgccga cttccgcccc caaagcctcc
    15661 gccaagccga caccgaggat aatgtcaaac tcgcccggaa tcaggtcttc aaatttgcct
    15721 gccggcattt tgtcgccgta ttccaccact ttgcgctctt cagacggcaa aatgccgcgc
    15781 atctgcacgc ccctgatttc gcccgcattg gccagcaatg cctgattgga aacatagggc
    15841 gcggcagcca aaataccttt gcggttttcg gtaaaccgaa gcaggttgcg ccaatccgta
    15901 tccgtattgt cgatatagcc gatttcggcg tgcggcgcga cattcaggag ctgcccgcgt
    15961 atttctttct gaaagccgtt cataaccgac aagacgacaa tcagcgcggt tacgcccaag
    16021 gcgattccgg caatcgaaac catcgtgata aacgacataa agccgttgcg ctttttcgcc
    16081 ctgagatacc tcaagcctat ccaagcctct agagaaaaca taacgctacc ttaaaaatgt
    16141 ctgcaaacgt gccgccccgg acggcggttt ggggcggcgg caaaagttta ttgtaccgta
    16201 aaacccaggc agcgtccgaa cgcccgagtg cgggggacgg ggcggcagag cgggcggaaa
    16261 acttgcacaa cgcgtcaaac tgccctatcc tttccttcag aaaaaccgtt tcttgaggaa
    16321 aacaatgaat atccgaactg cttttgcttt gtgcgccatc gccttatccg ccgctgcggc
    16381 tgcctacgcc aaagaaatca aaatcgatgc caacaacacg ccttattccg aagccgacgc
    16441 gcaaaagctg gcggcaacgg cagtcggtat gggtgttaag gaacctatca gcctgaacgg
    16501 cggcagcggc agcattaccg tgtccggcag cagcgcgacg cagtgcgtgt tcaaagtcgg
    16561 caacggaggc gcattgcaga ttcaagggct aaactgcaag taaaccgccc ggaaaaatgc
    16621 cgtctgaagg cttcagacgg cattttgcat tggcggcgtt atgccccgcc ttctttaatc
    16681 aggcggcgtt cgtacaccgc ctgcgccagc gttcccgcat cgacatattc caattcgccg
    16741 cccaagggga tgccctgcga cagcctgctg actttgtaag gcaggttttt aaaaaactcg
    16801 gacaggacat acgccgtcgc attgccttct gcggtaaaag cggttgcaat aatgatttct
    16861 tcgacttccc cgccgcccag ccgttgcgcc agcctgtcca atgcgatggc ggatacgtcc
    16921 attcccaatg ccgtattgat ttgccccatc aggacgaaat acagcccgtc gtggcagttt
    16981 gccgcttcca tattcgacac gtcggcaggc atatgcacca ccatcagccg ccgcccgtcg
    17041 cgtgtttcat cggcacaaat atcgcacaat ccgccttcgc aaaacgtgtt gcacatcgcg
    17101 caatggtaaa cctgcttcaa tgccgtctgc aaggcatcca ccagtttttc agcctctttg
    17161 cgcttgtgtt ggagcaaatg atacgctatc cgctgtgccg atttcggccc aacgttgggt
    17221 aaaaccttca gcgcgtcgat caatccttgg aaggcatctt gttttttgtg gctcatcata
    17281 ttccgccgta tgggaaaacg gccggaatat tccgaccgtt attttgtcaa caaaagtgtc
    17341 aattactgac cgtcgccgtt gtcgaccgat tgcgctcctt tggtctgttt gattttgccg
    17401 ttgaaataac gtatcaacaa gtcgaaagta ttggcagact gctgttgcgc caaagcctgt
    17461 tttgcaagcg gaagctgtgc ggcgatatca tccggcgggg ttacagcctg tacttcgaca
    17521 atcacgggtg ccggcagacc gatcagcctg acgtaggcgg gtttgccgtt tgccggtttt
    17581 gctttcagca gttccgcata agcctcgggc ggcatggact gccttgcctg ctgtgcgccc
    17641 aaaacggaca cttccgacca tttcacgtca acagccttgc cgccgttcag ttgggtaagc
    17701 acgtcttttg ccttgttttc ggcaagtttg gcggcttcgg tacggatata agcctgacgt
    17761 accgcgtctt tggcttcggc aaacggcagg gttttctctt cgcggacttc tttggcgcgg
    17821 acgacccacg cggtttcgct gttgatggtc agcacttcgg aattgtgttt tttcttcaat
    17881 acgtcgtcgc tgaaaacggc attgatcaga ttttcgggca taccggacat ttgcgcgtcc
    17941 tgcctactca gccaagtttc ttgggtttcg actttcaaac cgctgttttt ggcggcttcg
    18001 gcaagcgagg aaggatggtt gaacgcgtca tcgcccagct tttcttttgc cttattgaag
    18061 tcggcaaccg cctttttcat tttcaattcg ttttctacgg cggctttttc ctgctcgaaa
    18121 gaaggtttgg cttcatttgc cggcaaacgc gccacgcgct cttcaaacgc atttttcact
    18181 tctgtttcgc tgacggtctg tttgtctgca aagtctttca gattcaatgc gacatattcc
    18241 aatttgaccg ctttgggaag caggtagtct tttttgtttg cgttataaaa cttctgcaaa
    18301 tcggcttcag acactttgac ttgggcgatg aattcgtcgg ggttgaaagt gtgcgaacgg
    18361 atggtgcggt tgacctgcgt cagcctgatc agctgttccg cctgcgcgtc gccgaccaat
    18421 acgccgtttt ggacgaggtt taccaaattc tgcaaggcaa actgatcgcg gatttcttcg
    18481 acaaactggt cttcagacat atgacgttgg gaaaggtagc ggtttaaaag cgcgtggtcg
    18541 aatttgccgt ttgcgtcgtg gaaattggga tcgtccacga taatctgctt gatttgttcg
    18601 gaagaaaccg aaatgcccat cagcttcgcg ccctgtttca ggtaggcgcg ttgcagcagg
    18661 gattggaaca ccgcgtcgcg cgaagggctg ccgccgtccg cctgttcatt ttgcatagcg
    18721 ttgttgatgg agtggtcgct gattttttcg tcgcccactt ggacgatgta gtcggcaccc
    18781 ggatgggata ccgtgctgac cccgaagccg acgaaggtta atgcaatcag ccccaaaagg
    18841 acttgggcgg gcgttctgta tttttcgatg gaatggaaca tattttcaga ttggaaatgg
    18901 gattgggaaa ttcaagtcgg gtattgtaac ggtttttatc cctgtctgca cagggcttgc
    18961 cgattgaaga tgccgtcgta ggtttcttcg ctgaagccga cataaaccct gccgccgcac
    19021 tccaatacgg gacgcttgat caggctcggc atttcggaca tcagtttgac ggcctccgcc
    19081 gtcgaggaca gcactttttg ctgtgttccg gcatcaagtt tgcgccagct cgtcccgcgt
    19141 ttgttgagca gggttgccaa aggcacttgt tccagccacg agcagatttc cgcttcagac
    19201 ggcctctgtt ttttaaaatc ccgaaattca aactccaagc cgtatccggc aagcctgttt
    19261 ttggcttttt tgaccgtatc gcaatttggg atgccgtgaa ggattatcat ttggaaacct
    19321 tttgtctgaa ataataaaac ggatatttta ctataagtgt ctgaaaattt gcccgtctgt
    19381 ttcagacggc ggggcggtta tgttacaatc cgaaaattcg aaaaatttaa tctcttgttc
    19441 aataaaggct ttaccaatca tgatttctac caacggcatc accatgcagt tcggcgcgaa
    19501 gccgctgttt gaaaacgtat ccgttaaatt cggcgaaggc aaccgctacg gtttgatcgg
    19561 cgcgaacggc tcaggcaaat ccaccttcat gaaaatcctc ggcggcgatt tggaacagac
    19621 cgccggcgaa gtggcgattg aaaacggcgt gcgtttgggt aaattgcgcc aagaccagtt
    19681 tgcctacgaa gacatgcgcg tgctggacgt ggtgatgatg gggcataccg aaatgtgggc
    19741 ggcgatgacc gaacgtgatg cgatttacgc caatcccgaa gccaccgaag acgactacat
    19801 gaaagccgcc gaactggaag ccaagttcgc cgaatacgac ggctacactg ccgaagcgcg
    19861 tgccgccgaa ctgttgagcg gcgtgggcat ttccgaagat ttgcacaatg cgaaaatggc
    19921 ggaagttgcc ccgggcttca aactgcgcgt attgctggcg caggcgctgt tctccaagcc
    19981 ggatgtattg ctcttggacg aaccgaccaa taacttggac attaatacca tccgctggtt
    20041 ggaaggcgtg ttgaaccaat acgactccac gatgattatc atcagccacg accgccactt
    20101 tttgaacgaa gtctgcactc acatggcgga tttggactac aacaccatca ccatctatcc
    20161 gggcaactac gacgactaca tgctcgcctc cgcccaatcg cgcgaacgcg ccctgaaaga
    20221 caatgccaaa gccaaagaga aactgcaaga gctgcaagag ttcgtcgccc gcttctctgc
    20281 caacaaatcc aaagcccgtc aggcaaccag ccgtctgaaa caggccgaca aaatcaaatc
    20341 ggagatggtc gaagtcaaac cttccacccg tcaaaacccg tatatccgtt ttgaagccga
    20401 tgaaaaagcc aagctgcacc gtcaggctgt ggaagttgaa aaactggcga aacgctttga
    20461 accccagttg tttaaaaacc tgaactttat cctcgaagcg ggacaacgcc ttgccatcat
    20521 cggcccgaac ggcgcaggca aatccaccct gctgaaactc ttggccggcg cgtacaaccc
    20581 cgaatattca gacggcctct tgccggacga aggcagcatc aaatgggcgg aaaaagccag
    20641 tgtcggctac tatccgcaag atcatgaaaa cgacttcgac gtcgatatgg acctgagcga
    20701 atggatgcgc caatgggggc aggaaggcga cgacgaacaa gtcatccgcg gcactttggg
    20761 gcgtttgctc ttcggcagta acgatgtcgt gaaaaaagtg aaggttctct ccggtggtga
    20821 aaaaggccgt atgctttacg gcaaactgtt gctgttgaaa cccaatgtct tagtcatgga
    20881 cgaaccgacc aaccatatgg acatggaaag catcgaatcc ttgaacatgg cgctggaaaa
    20941 atacaacggc acgctgattt ttgtctccca cgaccgtcag ttcgtttcct ccttggcaac
    21001 ccaaatcatc gaactggacg gcaaaggcgg atatgaacac tacttgggcg attacgaaag
    21061 ttacttggag aaaaaaggcg tagcataacc gccggttgga acaatgccgt ctgaagccgc
    21121 ttcagacggc attgttgata actttaaaat aggaagcata tgcagactta cctcgtcggc
    21181 ggcgccgtcc gcgattatct tttgggcttg cccgtcaaag accgcgattg ggtggtcgtc
    21241 ggcgcagacg cacaaaccat gctggcgcaa ggcttccagc cggtcggcaa agattttccc
    21301 gtgtttctcc atcccgaaac gcacgaagaa tacgccctcg cccgcaccga gcgcaaaacc
    21361 gccaaaggtt acgtcggttt cagtttccac gccgacaaag acgttacgct ggagcaggat
    21421 ttgatgcgcc gcgacctgac catcaacgcg atggcgcaag atgcggacgg caagattatc
    21481 gaccctttcg gcggacaacg ggatttggcg gcaggcattt tgcgccacgt ttccccggcc
    21541 ttcgccgaag accccgtccg catcctgcgt actgcccgct ttgccgcgcg ttacaggttt
    21601 gaaatcgccg aagaaaccat aaagctgatg cggcagatgg tggaaaacgg cgaagcggac
    21661 gcattggttg ccgaacgcgt ctggcaggag ttggcgaaag gtttgatgga aaaaaatccg
    21721 cgcaaaatga ttgaagtgtt gcgcgaatgc ggcgcgctca aagtcttgct gcccgaagtc
    21781 aatgccctct tcggcgtgcc gcaacgcgcc gactaccatc ccgaaatcga cagcggcatc
    21841 cataccctga tgacgctgca acgcgccgcc gatatgggct tgagcctgcc cgaacgctat
    21901 gccgccctgc tgcacgactt gggcaaagcc aaaacaccgt ccgacatcct gccgcgccac
    21961 cacggacacg acctcgccgg tgtcgaaccc atgcgcgaag tcaatcagcg gctgcgcgcg
    22021 ccgaaacatt gcgccgagct tgccgaattg gtttgccgtt ggcacattat tttccaccaa
    22081 gtcggacagc ttaaaagcca aaccattctg aacgttttga aaaaaaccga cgctttcaga
    22141 cgacccgaac gctttcagac ggcattgaac gtctgcattg ccgacacgca aggccgtctg
    22201 aaccgcgaac acacgcccta cccgcaacgc gcgcactggc tcgccttact cgaagccgcc
    22261 aatcaggcgg attcgggcaa aatcgccgcc gaatgccgcg cgcagggaaa agcgcacctt
    22321 atcgccgaac aaatcgaccg ggcgcggctg gcacaaatcg ccccattgca aaaagcgttt
    22381 cgagcggcgc aagacaaaac agaaaaacat taaaacgtcc aatgcagcca cttttatagt
    22441 ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacagata gtacggcaag
    22501 gcgaggcaac gctgtactgg tttttgttaa tccactataa agttttgagg acgataccca
    22561 atccaagctt tgcaacagcc gccgccatat ccgctataat tcacgcttca gccattccgc
    22621 ccccgacata aaatcatgac cctgaaaacc gatttattgc ctaaaatcaa caacgaagat
    22681 tatcaacgcc tcatcctcaa acacagtgcg gaatttagcg gtggcgaaat ccgcctgttg
    22741 aacgaaatcc tcgaaaaatt caatttcgac gttgttcagg cgcaggcatt ggcgcaagcc
    22801 gtcatgcagc aaatccgctt cgaccccaac gcctaccaca tcgacagcga cgacgaagac
    22861 accaccggca tctgccccca ctgcatcaac ccgcctatgc cgcccctgcg cgactatctc
    22921 gtttggcgcg aaacgcgcgg ataaaacgct tttgaccgtt atcttttcaa tgccgtctga
    22981 aacgccgccg accgttcgga cggcataccc gataaaggga acactatgct gcaaaccgac
    23041 aacctgaccg ccgcgcaacc gcaacgcatc gttgccgccc aaaccgcctc cgcacaggaa
    23101 gaactgctcg aacgcgccct ccgccccaaa acgctggacg actacatcgg gcaagacaaa
    23161 gccaaagaac agcttgccat tttcatccaa gccgccaaaa aacgcggcga agcactcgac
    23221 cacgttttgc tcttcggccc gcccggactg ggcaaaacca cactggcgca catcatcgcc
    23281 aaagaattgg gcgtaaattt gcgccaaacc agcggccccg tcctcgaacg cgcaggcgac
    23341 ctcgccgccc ttttgaccaa ccttgatccg cacgatgtat tgttcatcga cgaaatccac
    23401 cgcctcagcc ctgttgtcga agaaatcctc tatcccgcgc tcgaagacta ccggctcgac
    23461 attatgatag gcgaaggacc cgccgcccgt tccgtcaaaa tcgacctgcc gcccttcacg
    23521 ctcatcggcg cgaccacccg cgccggtatg ctgaccaatc cgttgcgcga ccgcttcggc
    23581 atcgtctccc gccttgagtt ttacgaaaac cgagacctta ccaccatcgt cagccgttcg
    23641 gcacaactgt tgcagctcga tatgtccgaa gaaggcgcgg aagaaatcgc caaacgcagc
    23701 cgcggtacgc cgcgcatcgc caaccgcctg ttgcgacgcg tgcgcgattt cgccgacgtg
    23761 aaaaacaacg gcacaatcga cggcggcatc gccgatgccg ctttaagtat gctggacgtg
    23821 gacgcgcagg ggctggacgt gatggacagg aaatttctcg aagccgtttt gcacaaattc
    23881 ggcggcggcc cggtcggttt ggacaatgtt gccgccgcca tcggcgaatc tacagacacc
    23941 atcgaagacg ttatcgaacc ctaccttatc caacaaggct tcctgcaacg caccccgcgc
    24001 ggcaggatgg cgaccgaacg cgcctacctg catttcgggc tgcccgtcga aaaataacgc
    24061 aatgccgtct gaaacagagc taattttcag acggcatttc tatttcaatc attggcgcaa
    24121 ggttcagcct gccgcttttt tccagttccg ccctcatcgc atcaatcacc gccttatagt
    24181 ctggtttgcc gaaaatcgca gaaccggcaa caaaggtatc cgcaccagct cgggcaacgg
    24241 cggcaatatt gtcggttttg atgccgccgt ccacttcgat ggcgatgtgc cgcccgcttt
    24301 gtgcttcgta ccgatccagc atcgcccgca cccggcggat tttttcaagg gtgtgcggga
    24361 tgaagctttg tccgccgaat ccggggttga ccgacatcag caaaaccata tccagcctgt
    24421 ccaatacgtt ttccaacaga tatacgggcg ttgccggatt caacaccagc cccgcctgac
    24481 agcccatatc acgaatcagg ctcaagctgc ggtcgatatg gcggctcgcc tcgggatgga
    24541 acgtgatgat tgatgctcct gctttggcaa acgactgaat caggtcgtca acgggttcga
    24601 ccatcagatg cacatcaatc ggcacgcttg cataaggctt caacgccgcg caaaccatag
    24661 ggccgaaggt caggttcggc acataatggt tgtccatcac gtcaaaatgg atcagatctg
    24721 cacctgccgc aatgacgctt tccacctctt ctccgaggcg ggcaaagtct gccgataaaa
    24781 tgctgggtgc gatacggtaa gtagtcatgt tttttccttc aatatcctt
//
LOCUS       DAWGBY010000016        23335 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.016, whole genome shotgun sequence.
ACCESSION   DAWGBY010000016 DAWGBY010000000
VERSION     DAWGBY010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.016"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            43..1719
                     /gene="pilB"
                     /locus_tag="WHG62_000592"
     CDS             43..1719
                     /gene="pilB"
                     /locus_tag="WHG62_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ1724750.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSATGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLHRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
     gene            complement(1804..2013)
                     /gene="yacG"
                     /locus_tag="WHG62_000593"
     CDS             complement(1804..2013)
                     /gene="yacG"
                     /locus_tag="WHG62_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ1724751.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADEEYTVSDQTESLPEISEPDGAYR"
     gene            complement(2006..2638)
                     /locus_tag="WHG62_000594"
     CDS             complement(2006..2638)
                     /locus_tag="WHG62_000594"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ1724752.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHNG"
     gene            complement(2640..3500)
                     /locus_tag="WHG62_000595"
     CDS             complement(2640..3500)
                     /locus_tag="WHG62_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ1724753.1"
                     /translation="MSDLSVLSPFAVHLTAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            complement(3574..4806)
                     /gene="pilG"
                     /locus_tag="WHG62_000596"
     CDS             complement(3574..4806)
                     /gene="pilG"
                     /locus_tag="WHG62_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ1724754.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPPLTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            5316..6959
                     /gene="pgi"
                     /locus_tag="WHG62_000597"
     CDS             5316..6959
                     /gene="pgi"
                     /locus_tag="WHG62_000597"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ1724755.1"
                     /translation="MNAFTRAWHALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALEFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHITVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPVTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            7169..7990
                     /gene="dapD"
                     /locus_tag="WHG62_000598"
     CDS             7169..7990
                     /gene="dapD"
                     /locus_tag="WHG62_000598"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ1724756.1"
                     /translation="MSLQNIIETAFENRADITPSTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQASPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            8145..8930
                     /gene="fabI"
                     /locus_tag="WHG62_000599"
     CDS             8145..8930
                     /gene="fabI"
                     /locus_tag="WHG62_000599"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ1724757.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELGSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(9115..10113)
                     /gene="ilvE"
                     /locus_tag="WHG62_000600"
     CDS             complement(9115..10113)
                     /gene="ilvE"
                     /locus_tag="WHG62_000600"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ1724758.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLVPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            10423..10737
                     /locus_tag="WHG62_000601"
     CDS             10423..10737
                     /locus_tag="WHG62_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ1724759.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            10748..11917
                     /gene="lapB"
                     /locus_tag="WHG62_000602"
     CDS             10748..11917
                     /gene="lapB"
                     /locus_tag="WHG62_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ1724760.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            11881..12357
                     /gene="gloA"
                     /locus_tag="WHG62_000603"
     CDS             11881..12357
                     /gene="gloA"
                     /locus_tag="WHG62_000603"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ1724761.1"
                     /translation="MADVYAKQNRSLTTTERNTKMRLLHTMLRVGNLEKSLDFYQNVL
                     GMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDA
                     YEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(12530..15055)
                     /locus_tag="WHG62_000604"
     CDS             complement(12530..15055)
                     /locus_tag="WHG62_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ1724762.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENVTETV
                     AETPDFNATADDLSALLQPSEVPAVEENAAEIVADDLSALLQPAEAPAVEENVTKTVA
                     EIPDFNATADDLSALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLE
                     TPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKY
                     DLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            15363..15893
                     /locus_tag="WHG62_000605"
     CDS             15363..15893
                     /locus_tag="WHG62_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ1724763.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVIFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            15896..16186
                     /locus_tag="WHG62_000606"
     CDS             15896..16186
                     /locus_tag="WHG62_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ1724764.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            16186..16464
                     /locus_tag="WHG62_000607"
     CDS             16186..16464
                     /locus_tag="WHG62_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ1724765.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            16513..17379
                     /locus_tag="WHG62_000608"
     CDS             16513..17379
                     /locus_tag="WHG62_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ1724766.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            17450..18208
                     /locus_tag="WHG62_000609"
     CDS             17450..18208
                     /locus_tag="WHG62_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ1724767.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            18282..18773
                     /locus_tag="WHG62_000610"
     CDS             18282..18773
                     /locus_tag="WHG62_000610"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ1724768.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDIEK
                     DARYVADKIAHLRVFEDEAGKLNLSLKDVGGSVLLVSQFTLYADAASGRRPSFSKAAP
                     AEQAKRLYLHTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            18804..19814
                     /gene="dusA"
                     /locus_tag="WHG62_000611"
     CDS             18804..19814
                     /gene="dusA"
                     /locus_tag="WHG62_000611"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ1724769.1"
                     /translation="MNDNTHTLPPRRLSVAPMLDWTDRHYRYLARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDAMLLKDNDGGLILEAWEEVERANT
                     RE"
     gene            complement(19882..20769)
                     /gene="gluQRS"
                     /locus_tag="WHG62_000612"
     CDS             complement(19882..20769)
                     /gene="gluQRS"
                     /locus_tag="WHG62_000612"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ1724770.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAAASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSHRYALYEETLCRLQTAGLVYPCHCSRK
                     DWQAGARRGADGFVYNGRCRHPGQRPAPQGKQPAWRIRVPDRIIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMDKVPKHAITTP"
     gene            complement(20786..21076)
                     /locus_tag="WHG62_000613"
     CDS             complement(20786..21076)
                     /locus_tag="WHG62_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724771.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLIGRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALIHSLK"
     gene            complement(21218..22273)
                     /gene="tal"
                     /locus_tag="WHG62_000614"
     CDS             complement(21218..22273)
                     /gene="tal"
                     /locus_tag="WHG62_000614"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ1724772.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRAACGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALEILVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKTAYQDWEQYFTAPKFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVDEARARLAEIAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            22369..>23335
                     /locus_tag="WHG62_000615"
     CDS             22369..>23335
                     /locus_tag="WHG62_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ1724773.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFALAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAAR"
BASE COUNT         5224 a         5977 c         6677 g         5457 t
ORIGIN      
        1 ctgtacaggt ataacaatga ataaatttgg ggataaggtc gtatgagcgt aggtttgctg
       61 aggattctgg ttcaaaacca ggtggttact gttgagcagg ccgagcatta ctacaatgag
      121 tcgcaggcgg gtaaggaagt gttgccgatg ctgttttcag acggtgtcat ttcgcccaag
      181 tcgcttgcgg cattgattgc gagggtgttc agttattcga ttcttgattt gcgtcattat
      241 ccgcgccaca gggtgctgat gggggtgttg acggaggagc agatggtgga gttccactgt
      301 gtgccggttt tccgtcgggg cgacaaagta ttttttgcgg tttccgatcc gacacagatg
      361 ccgcaaattc agaaaaccgt ttctgccaca gggattgagg ttgagttggt cattgtcgag
      421 gatgaccagt tggcgggttt gctcgattgg gtgggttcgc gttcgacatc gctgcttcag
      481 gagcttgggg aggggcagga ggaagaggaa agccacaccc tgtatatcga caacgaggag
      541 gcagaagacg gccctgttcc gaggtttatc cataagactt tgtcggatgc cttgcgcagc
      601 ggggcatcgg acatccattt cgagttttac gaacacaatg cccgtatccg tttccgtgtg
      661 gacgggcagc tccgcgaggt ggttcagccg cccattgcgg taagggggca gcttgcttcc
      721 cggattaagg taatgtcgcg tttggacatt tccgaaaaac ggataccgca ggacggcagg
      781 atgcagctga cctttcaaaa gggcggcaag cctgtcgatt tccgtgtcag cacattgccg
      841 acgctgtttg gcgaaaaggt cgtgatgcgg attttgaatt ccgatgccgc gtctttgaac
      901 attgaccagc tcggttttga gccgtttcag aaaaaattgt tgttggaagc gattcaccgt
      961 ccctacggga tggtgctggt aaccggtccg acgggttcgg gtaagacggt gtcgctctat
     1021 acctgtttga atattttgaa tacggagtcg gtaaatattg caacggcgga agaccctgcc
     1081 gagattaacc tgccgggcat caatcaggtt aacgtcaatg ataagcaggg tctgactttt
     1141 gccgctgctt tgaagtcttt cctgcgtcag gatccggaca tcattatggt cggtgagatt
     1201 cgtgatttgg aaactgccga tattgcgatt aaggcggcac aaacagggca tatggtgttt
     1261 tccaccctgc acaccaataa tgcgccggcg acgttgtcgc gtatgctgaa tatgggtgtc
     1321 gcgccgttta atattgccag ttcggtcagc ctgattatgg cgcagcgtct tttacacagg
     1381 ctgtgttcga gctgcaaaca ggaagtggaa cgcccgtctg cctctgcttt gaaggaagtc
     1441 ggcttcaccg atgaggacct tgcaaaagat tggaaacttt accgcgccgt cggttgcgac
     1501 cgttgccggg ggcagggtta taaagggcgt gcgggcgtgt atgaggttat gcccatcagc
     1561 gaagaaatgc agcgtgtgat tatgaacaac ggtacggaag tggatatttt ggacgttgcc
     1621 tataaggagg gtatggtgga tttgcgccgg gccggtattt tgaaagttat gcagggcatt
     1681 acttcattgg aagaggtaac ggcaaatacc aacgattagg tttgagaatg aaaatgccgt
     1741 ctgaagcgtg tttgtttcag acggcatttg actttcaggg tgtttgccgg gaaggcgggg
     1801 cggtcagcgg tatgctccgt cgggttcgga tatttccggc aaactttccg tttggtcgga
     1861 aaccgtatat tcctcatctg cccatccgcc caagtcgatc agtttgcagc gttgcgaaca
     1921 gaaggggcgg aatgcgtttt cgggttccca tactactgct gtttgacagg tcggacattt
     1981 gacttgaagg cgtgtttgcc gcgattcagc cattgtgttt tccttgtgtt ggttttgagg
     2041 cgaaaatccc tgaataaaac gcgtgcaggc gcattgtttt ctcacgcagg cttttgaggc
     2101 tgccgtcatt gagcagcaca tcgtctgcaa gcagcaggcg ttcggattcg gatgcctgat
     2161 ggctgatgat gtccgccacc tcgccgcgcg tcagcccgct gcgggccatc accctgccga
     2221 tacgtttttc caaaggtgcg cttatggtca ggacacgccg tatcaggctg ataaattgac
     2281 gcttttccgt cagcagcgga atttcgacaa tgccgtaagc cgcatcggta aaggtttctt
     2341 gctgtttttt gatttctgag aaaatcagcg gcaacatcac ggattcgagc aaggcttttc
     2401 gcgatgggga ggcaaagact tctttacgca atatgtcgcg tcgcaacaaa ccctgtgtgt
     2461 cgaaaacggt gtcgccgaac agccgcctga tttccggcag ggcgatgccg tctgaagccg
     2521 tcagcgagtg cgccgccgca tccgcatcga tacgcggtac gcccaaatcg gcaaaacatt
     2581 gcgcggctgc cgatttgccg ctgccgattc cgccggtcag tccgacccat accgtcatct
     2641 tacagcaccg gatgggtcag ccaccagttg accgcccgcc atacggaatc gtttgccgta
     2701 aaaattatcc agcccgaaac tgtcagtgcg gggccgaagg caaaatgctg ccccttggcg
     2761 acgcgcataa cgattgccgc gaccaaaccg atcagcgagg aaacaaaaat cagcacgggc
     2821 aatgcggata tgccgagcca cgcgcccaat gcggcaatca gtttgaaatc tccgttgccc
     2881 ataccgattt cgcctttaat cagtttatat accgcgcata aaagccatat cgaaccatag
     2941 ccggcaaccg cacctaaaac ggcagactgc aaaggcacga agccgccgtc caaattaaat
     3001 atcagcccca gccaaatcaa gggtaatgtc atcgagtcgg gcaggtattg ggtgtccgca
     3061 tcgataaagg tcagggaaat cagaaacgcg gtcagtatca aaccgcccaa tgtaatccaa
     3121 gaccagccgt attgccaggc aaccagcccg aacaatacgc cggtcagcag ttcgattaag
     3181 ggatagcgta tgctgatttt ggtttggcag gaggcgcatt tgccgcgcag gagcaggtag
     3241 ctgacaatcg ggatgttctg ccacgcgcgt atcggcacgc ggcatttggg acagcaggaa
     3301 tccggtttca tcaggttgaa ggtacggctt tcctcttcgg tcagcggcag gtttaaatat
     3361 tctttggcaa ataccgtcca gccgcgttcc atcatgaccg gcacgcggta aatgacgaca
     3421 tttaagaaac ttccgaccag cagcccgaac accgctgtca aatgcacggc aaacggcgac
     3481 aatacagaca aatcagacat attttgttct caatgtattc aaaacaaaaa caaaccggcg
     3541 cagagcgaat ccgcgccgga tctgtgcggc aaatcaggcg accacgttgc ccaaattaaa
     3601 cagcggcaga tacatggcga ccagaagcgt gccgatgacc aagcctaaaa tcacgataat
     3661 gatcggctcc atcatagcgg acagcctgcc gaccgcattg tccacctcgt cttcgtaaaa
     3721 ttcggcggct ttgttgagca tatcgtccaa agaacccgat tcctcgccga tggaagacat
     3781 ctgcaacatc atattgggga acagttccgt cgcacgcatc cccgaagtca tagacaaacc
     3841 ttggatgacg cgcgtacgga tttcccgggt ggcttcttca tagattaaat tgcccgccgc
     3901 gccggcagtg gagtccaata catcgaccaa aggcacgcct gccgcaatca gcgtcgccgt
     3961 cgtcctgccc cagcgggcaa tcgtcccttt gcggacaatg tctccgaaaa tcggcatacg
     4021 cagcagtatg gcatccatac gccgttggat tttaatcgaa cgcgccttca atttaaggaa
     4081 gccgtatatg gcaaagccca gtgcgatcag caccatccag ccgtatgaga cgaaaaagtc
     4141 ggacatatcc atcactgttt gggtcagtgg gggaagctcc gcgcccatat tggcgtaaac
     4201 ttctttaaag gcgggcagta cgaaaatcat catcacgaat accaaaccga tggcgacggc
     4261 gatgacggat accggatagg tcagcgcggt ttttaccttt ttgcggatgg cctgggtttt
     4321 ttctttgtaa attgccaatt tgtccagcag gctttccaat acgccgcccg tttcgcccgc
     4381 cgcaaccagg ttgcagtaga agcggtcgaa atatttcggg tggtttgaga atgcgcggct
     4441 caacgagctg ccctgttcca cttcgcctcg gatttccatc agcatttccg tcatagacgg
     4501 gttgccgtgt ccgcgcgcca cgatttcaaa tgcctgcatc agcggcaggc ccgctttaat
     4561 catcgtggaa agctggcggg tgaaaacggt gatgtcttct tgtgtgattt tgcgcttgga
     4621 gcttgttttc acacgggtaa tctgcaacgg gcggatgccg cgttttgcca gttttttgcg
     4681 cgcctcttct tcggtaaacg cggatacttc gccgttgacc agtttgtcgg aggcggaatg
     4741 cctgccttca aagataaagc gtttttcttt ctttgcgaac aaagaaaatc ctccgttttt
     4801 agccatattc tagccccgta aagtaattgg aataaaatgt aagaaacatc gttaaaaaac
     4861 agtaccggcg tgttcccggt aagatgaaaa ccgccgacat cccgcctgcg ggcggcaaac
     4921 gggacagaat cggatgcgat tataccttat ttaggcggct gtccggcatt tatgcgtaca
     4981 caataaatct tgcaggatat tgttacgggt caaatgtcgg tcggagggta tagtgaatta
     5041 acaaaaaccg gtacagcgtt ggctcgcctt agctcaagag agaacgattc tctaaggtgc
     5101 tgaagcacca agtgaatcgg ttctgtacta tttgtactgt ttgcggctcg ccgccttgtc
     5161 ctgatttttg ttaattcact atattttcgc catatggaaa taaggtgcta ttggacgcgg
     5221 cgggcggtgt tccggagatt cgccaaagcc gctgccgttt gttaaactac attctgctac
     5281 attttaatcc ggttctgaaa aatcaaggaa aacagatgaa tgcttttacc cgtgcatggc
     5341 atgcgctcga acgccattat caggatacgc gtcatgtcct tttgcgcgac cgctttgcct
     5401 gcgaacccga ccgttttgag cgtatgcacg agcgtttgga cgggatgttg ttcgattaca
     5461 gcaaaaaccg tttgggcgaa gatacgctgc aactgctctg ccgtcttgcg gagacggcgg
     5521 atttggaagg gaaaatgcgt gctttgcgga cgggtgcgaa agtcaacggc agcgaggggc
     5581 gtgccgcgct gcatacggct ttgcgcctac ccgacggtgc ggatgccgtt tatgcggacg
     5641 gcagggacgt gttgcccgaa atccgccgcg agttaaatcg tgcgttggag tttgcacaca
     5701 gtttggacga cggttcgtat caggggacaa ccggaaaacg gattacggat tttgtccaca
     5761 tcggcatagg cggatccgac ctcgggccgg caatgtgcgt gcaggcactt gagccgttca
     5821 gacggcatat caccgtccat tttgccgcca acgccgatcc tgcctgcctg gatgcggttt
     5881 tatgccgtct gaaccccgaa acgacagtgt tttgcgttgc cagcaagtcc ttcaaaacac
     5941 cggaaaccct gctcaatgca caggcagtca aggcgtggta tcgcggtgcg gggttctcgg
     6001 aatccgaaac ggcgtgccat ttttgcgcgg tgtctgccga cactgcggca gctgcggctt
     6061 ttggtatcgc ggcggaacgc gtgtttgcga tgtacgactg ggtgggcgga cgctattccg
     6121 tctggtcgcc cgtcggtttg cccgtgatgg ttgcggtcgg cggggcgcgt ttccgcgagt
     6181 tgttggcggg ggcgcacgcg atggacagcc attttttcca cacgccgccg cgccgcaaca
     6241 ttcccgttct gatggcactg attgccgtgt ggtataacaa tttccaacac gcggacgggc
     6301 agaccgccgt tccgtacagc cacaacctgc gcctgctgcc ggtgtggctg aaccagctcg
     6361 atatggagag tttgggcaaa agccgcgctt cagacggcag tcccgccgtg tgcaaaacgg
     6421 gcggcatcgt gttcggcggt gaaggggtca actgccagca cgcctatttc caactgctcc
     6481 accaaggcac gcgcctaatt ccctgcgact ttatcgtccc ggtgacggcg cagggcgtgg
     6541 aggacggacg cagccgtttt accgttgcca acgcctttgc ccaagcggaa gccctgatga
     6601 agggcaaaac cttggacgaa gcacgcgccg aactggcaga tttgcccgaa gcggaacgcg
     6661 aacgccttgc gccgcacaaa gagttccctg gcaaccgccc cagcaacagc atcctgctcg
     6721 accgcctcac gccctacaat ttgggtatgc tgatggcggc ttacgaacac aaaaccttcg
     6781 tccaaggcgc gatatggaac gtcaacccct tcgatcagtg gggggtggaa tacggcaaac
     6841 agttggcaaa aaccatcatc ggcgaactgg aaggcggcac gtccgtacac gatgcctcga
     6901 ccgaagggct gatggcgttt taccgcgaat gccgtctgaa aggcggcggt gcggcataaa
     6961 ggtactgccg cctttctgta ttgattcggg cgcggaaaag gcaatacctg ccgcccgccc
     7021 gattccgaaa cgccaatgtt cggcaaccgc ccgcgtattg ctgacgaata tgcgtttgcg
     7081 tggcacaata gcgcattcat ttcaaatgaa catactgctt gaaaataccg gcaagcgtcc
     7141 cacgaaacat ctcacataag gaaacattat gtctttgcaa aacattatcg aaaccgcctt
     7201 tgaaaaccgc gcggacatca ccccgtccac cgttactccc gaagttaaag aagccgtgtt
     7261 ggaaaccatc cgccaactcg attcaggcaa actgcgcgtc gccgaacgct tgggcgtggg
     7321 cgaatggaaa gtcaacgaat gggcgaaaaa agccgtgctg ctgtccttcc gcatccaaga
     7381 caacgaagtc ctcaacgacg gcgtgaacaa atactttgac aaagtgccga ccaagtttgc
     7441 cgattggtct gaagacgagt tcaaaaacgc aggcttccgc gccgttccgg gtgcggttgc
     7501 gcgtcgcggc agcttcgttg ccaaaaatgt cgtgctgatg ccgtcttacg tcaacatcgg
     7561 cgcatacgtc gacgaaggcg cgatggtcga tacttgggca accgtcggct cttgcgcgca
     7621 aatcggcaaa aacgtccact tgagcggcgg tgtcggtatc ggcggcgtac tcgaacccct
     7681 gcaagccagc ccgaccatta ttgaagacaa ctgcttcatc ggtgcgcgtt ctgaaatcgt
     7741 tgagggcgtg attgtcgaag aaggcagcgt gatttctatg ggcgtgttca tcggtcaatc
     7801 caccaaaatc tttgaccgta caaccggcga aatctaccaa ggccgcgtac cggcaggttc
     7861 ggttgtcgta tccggcagta tgccttccaa agacggcagc cacagccttt actgcgccgt
     7921 catcgtcaaa cgcgtggacg cgcaaacccg tgcgaaaacc agcgtcaacg aattgttgcg
     7981 cggcatctga tgccttaaac cgtatttgaa acgtccgatg ccgtctgaaa tccgcttcgg
     8041 acggcattgc cgtttgcatg ctgcaacgtg aaaacacaga aacagggaca atttgctata
     8101 atcaacggtt tagaatgaac cgaacactat ttgaaggata caaaatgggt tttctgcaag
     8161 gcaaaaaaat tctgattacc ggcatgattt ccgagcgttc catcgcttat ggcatcgcca
     8221 aagcctgccg cgaacaaggc gcggaactgg cgtttaccta cgttgtggac aaactggaag
     8281 agcgcgtccg caaaatggcg gcggaattgg gttccgaact cgtattccgc tgcgatgtcg
     8341 ccagcgacga cgaaatcaac caagtgttcg ccgacttggg caaacattgg gacggcttgg
     8401 acggtttggt gcattccatc ggcttcgcgc cgaaagaagc cttgagcggc gacttcctcg
     8461 acagcatcag ccgcgaagcg ttcaacaccg cacacgaaat ttccgcatac agcctgcccg
     8521 cattggcaaa agccgcccgt ccgatgatgc gcggcagaaa ctccgccatc gttgccctga
     8581 gctacttggg cgcggtgcgc gcgattccaa attacaacgt gatgggtatg gcaaaagcca
     8641 gccttgaggc gggcatccgt tttaccgccg cctgtctggg caaagaaggc atccgctgca
     8701 acggcatttc cgccggcccg attaaaacgc ttgccgcctc cggtatcgcc gatttcggca
     8761 aacttttggg acacgtcgcc gcccacaatc cgctgcgccg caacgttacc attgaagaag
     8821 tcggcaatac cgccgccttc ctgctgtccg acctgtcgtc cggcattacc ggcgaaatca
     8881 cttacgttga cggcggttac agcattaatg ccttgagcac cgagggataa tccgccgttt
     8941 tcaaatccgt gcgccgtccg taccgcgtat cggtttcggg cggcggtttg ctgtctgaag
     9001 cgtatttcta gggaaatgcc cgacttgctg caggtgcagc ggaaatggtc cgaacgcgaa
     9061 aatgccgtct gaaacgccaa acgggtttca gacggcattt ttttatttaa agcatcagca
     9121 cacttcaacc agccagccgt atttgtcttc cgccaaacca tactggatgt cggtaatcgc
     9181 cttacggatg gcatagccgc gttcttggct tttcacttcg atttctttgc cgccgatgac
     9241 gaaggaagta acgggcgaga tgacggctgc cgtaccggtc agaatcgcct ccgcaccgtt
     9301 ttccaccgca gctttgagtt cgtcaaccgt gaaattgcgt tcgctgacgg tatagcccaa
     9361 atctttggca accgtcagta cggaatcgcg ggttacgccg tgcaaaaatt cgtcggtcag
     9421 cggtttggta atgatttcat cgccgttaat caggataaag ttggacgcgc cggtttcctg
     9481 cacgtcgccg ttcgggcaga agaggacttg gtttgcgccg tattcggctt tcgccttcag
     9541 cacccagtgc atggcggaag cgtagttgcc gccgcatttg acgcggccca tatgcggggc
     9601 gcagcggatg tgttcggttt ccactaaaat tttgacgggc gagccgactt tgaaatagtc
     9661 gccgacgggg gaagccaaaa tatacagcag ggcggtttcg gaaggagaac cggccttgcc
     9721 gatgacggga tcggtaccga ttaaggtcgg gcgcaggtac agggcggcag gcgcatcggg
     9781 aatttcgtcg gcggcacgtt tgaccagttc gaccaaagca tcgagatagg cttgggtttc
     9841 ggggcggggc aggtgcaaaa tgtccgcact ttgccgcata cgcgcgatat tggcagtcgg
     9901 acggaacagt acgattttac cgtctgcctg acggaaggct ttcagtccct cgaaacattc
     9961 gctgccgtag tgcagggcgt gcgcacccgg tacgagggag aggtcttggg aagattgcca
    10021 ttcggtcggc tgccatttgc cttcgcggta ggcgaggacg ggcatttgac tgtgaaaaac
    10081 gctgccgaat acggcgggta cgggtctgct catgatgtaa agcctttctt attctgatat
    10141 gtttcaatga acggtttgaa tttgaagatt gtaaagatac gcctgcaaac agggttttga
    10201 caagtgcgcg gcgggttttt ctgtcgatgc ggtgtccaat ccgttatttt tcaaatggaa
    10261 aggaacggtg tatttggtaa aattgtcggc aatcgcatac tccgtatgtc gtccgaacac
    10321 gctgccgcat cctatccgaa accgtgcaaa tcgtttaaac tagcgcaatc ttggttcaga
    10381 gtgcgaagct gtccgggcgg cgtttttatt tacggagcaa acatgaaact tatctatacc
    10441 gtcatcaaaa tcattatcct gctgctcttc ctgctgcttg ccgtcattaa tacggatgcc
    10501 gttacctttt cctacctgcc ggggcaaaaa ttcgatttgc cgctgattgt cgtattgttc
    10561 ggcgcatttg tagtcggtat tgtttttgga atgtttgcct tgttcggacg gttgttgtcg
    10621 ttacgtggcg agaacggcag gttgcgtgcc gaagtaaaga aaaatgcgcg tttgacgggg
    10681 aaagagctga ccgcaccacc ggcgcaaaat gcgcccgaat ctgccaaaca gccttgagaa
    10741 agccgatatg gacaatgaat tgtggattat cctgctgccg attatccttt tgcccgtttt
    10801 cttcgcgatg ggctggtttg ccgcccgtgt ggatatgaag actgtattaa agcaggcaaa
    10861 aagcataccg tcgggatttt ataaaagtct ggatgccttg gttgaccgca acagcggacg
    10921 tgccgccagg gaattggcag aggtcattga tcagcagcct cagtcatacg acctaaacct
    10981 caccctaggc aagctttacc gtcagcgtgg cgaaaacgac aaagccatca acatacaccg
    11041 gacaatgctc gattctcccg atacggtcgg cgaaaagcgc gcgcgcgtcc tgtttgaatt
    11101 ggcgcaaaac taccaaagtg cggggttggt cgatcgtgcc gaacagattt ttttggggct
    11161 gcaagacggt aaaatggcgc gtgaagccag acagcacctg ctcaatatct accaacagga
    11221 cagggattgg gaaaaagcgg ttgaaaccgc ccggctgctc agccatgacg atcagaccta
    11281 tcagtttgaa atcgcccagt tttattgcga acttgcccaa gccgcgctgt tcaagtccaa
    11341 tttcgatgtc gcgcgtttca atgtcggcaa ggcactcgaa gccaacaaaa aatgcacccg
    11401 tgccaacatg attttgggcg acatcgaaca ccgacaaggc aatttccctg ccgccgtcga
    11461 agcctatgcc gccatcgagc agcaaaacca tgcatacttg agcatggtcg gcgagaagct
    11521 ttacgaagcc tatgccgcgc agggaaaacc tgaagaaggc ttgaaccgtc tgacaggata
    11581 tatgcagacg tttcccgaac ttgacctgat caatgtcgtg tacgagaaat ccctgctgct
    11641 taagtgcgag aaagaagccg cgcaaaccgc cgtcgagctt gtccgccgca agcccgacct
    11701 caacggcgtg taccgcctgc ttggtttgaa actcagcgat ttggatccgg cttggaaagc
    11761 cgatgccgat atgatgcgtt cggttatcgg acggcagcta cagcgcagcg tgatgtaccg
    11821 gtgccgaaac tgccacttca aatcacaagt ctttttctgg cattgtcctg cctgcaacaa
    11881 atggcagacg tttacgccaa acaaaatcga agtttaacca ctaccgagag gaacacaaaa
    11941 atgcgcttac tccatactat gctccgcgtg ggcaatctcg aaaaatccct cgatttctac
    12001 caaaacgttt tgggtatgaa actgctccgc cgaaaagatt atcccgaagg cagatttacc
    12061 cttgccttcg tcggttacgg cgacgaaacc gacagcacgg ttttggaact gacgcacaac
    12121 tgggatacgg aacgatacga cttgggcaac gcctacggac acatcgcggt tgaagtggac
    12181 gatgcctacg aagcctgcga acgtgtgaag cggcagggcg gaaacgtcgt ccgcgaagcc
    12241 ggcccgatga aacacggcac aaccgtgata gccttcgtcg aagaccccga cggatacaaa
    12301 atcgagttca ttcaaaagaa aagcggtgac gattcggttg cctatcaaac tgcctgatac
    12361 cgccgccgcc aatgccgtct gaagccttta ggggtttcag acggcatttt gttgccgtcg
    12421 gcctgctgtt tgagcctgtg ccggttcaaa ctttatccgt tacaccgata aggcaaaaaa
    12481 agatgccgtc tgaaacggca tccttgatct gcgaaagggc agttgggaat caaataccca
    12541 attcctgcgc caatgcttgg gcacgtttga gtacgtcgcc ttccgcttct tccagcaatt
    12601 tctgcactgt ctcggcagcg gcatcgcggt cgccgatttc gagatacatt tcggcaaggt
    12661 cgtatttcgc ttcggaaggc gcgtcagaac ctacagattc cgaagggaaa ctggtatctg
    12721 cattatttgg gatattttct tccgagaggt agatgctcca atctaccgtt tcctcctcgc
    12781 cgtctttcag gaagtcgggc aaagcgtctg cttcagaggt gttggaatca ggcgtttcca
    12841 aagtgatttc cgctgcattt tcctcaacgg ccggtgcttc agcaggttgc aacagtgcgg
    12901 acaaatcatc ggcaacggtt tccgctgcat tttcctcaac ggcaggtact tcagaaggtt
    12961 gaagtaatgc ggacaaatcg tctgcggtgg cgttgaaatc aggtatttcg gcaacggttt
    13021 tcgttacatt ttcctcaacg gccggtgctt cagcaggttg caacagtgcg gacaaatcat
    13081 cggcaacgat ttccgctgca ttttcctcaa cggcaggtac ttcagaaggt tgaagtaatg
    13141 cggacaaatc gtctgcggtg gcgttgaaat cgggtgtttc ggcaacggtt tccgttacat
    13201 tttcctcaac ggacggtgct tcggcaggtt gaagcaatgc ggacaaatcg tctgcggcgg
    13261 cgttgaaatc gggcgtttca ggcgcagttt ccgcgacggc atcggtttcg tacactttca
    13321 ggaaatcgtg caactcttcc ggtgtttgga cttcggcaac tgttttttcc aagatggttt
    13381 cgggcgagga agccttcagg aagcctgcca gtccggaggg tgaggcaggt tttgcggaag
    13441 ctgtttcttc tgtgccgata tggttgtttg agggcaggtt gtcggagaaa tcggtatcga
    13501 cggtttccgg tttgttttcg gcagtttggg cgacagattc cggttcgggc gtgtcgatga
    13561 cgatttcgac agggttgtac gggttgaagg tctcgggctc gtacacgctg tctgtggatt
    13621 cgatggcgtt ccaatcggca tccgcgcgtt tttgggtttc ttcatcctgc gtaagtgcgc
    13681 cggataaaat gccgttttgc gcggctgcca ggctgtcgaa atccaagtcg atgcggttgg
    13741 aaggcgtatc ggtttcgaca tcgaacgttt gttttgccga taactcttct tcagattccc
    13801 catctaaggc aagtgtgtcg tttacatcgt ttttcggagc gggttcgggc gttgccggag
    13861 tttcgacttc ggcaaaggtg atttctatgc cgtcgtctgc cgcgtcgtca aggtcaggct
    13921 cttcctcagg gacggattct tcggtacggc gcgcgcgttt ggattgggca aggcgcaaaa
    13981 gcagcagcag ggcgatcaat gccgcgcctc cgccggcaag cagcaaggtg tacgaaccgc
    14041 cgaacagacc gtcaaacagt ccgctttcgg tttcttcttc ggcagaaacc tgttcgacag
    14101 gttcggaaac ggcgttaccg gtttcgtcgg tcggcgtgtc gatggcagaa gcggcggctt
    14161 cttggggggc ggattcggca gcggtttccg atgcggcagt atttgcagcg ggtacaggtt
    14221 cgggtcgaac ggccggtttt tccgcttttg cttcgggcgc ggcaactttt gcttcaggtt
    14281 tttcaaccgg tttctctacc gttgcctgtt tggacggttc ggacggcatg gatgcggttt
    14341 cggctttggg tttcgccgtt tgcggtttgg gttgttccgc tttgatcctg ttcagattcg
    14401 gaatgtgaag cacgctgccc gcacgcagtc tgccgtgtgc ggaaacattt gggtttgcct
    14461 tcagcagcgc atcggcaacc tgttcgagcg tcaggtgttt cgggcggatg gcggcggcaa
    14521 tctgtttgac cgtttcgcct ttgcggacgg tatgggtttt gccgttgtat gccggtttga
    14581 cggctgcgtt cgcgctgtct tttttatcgg ttttgcggag ggctttggcg ttttgatttt
    14641 cttgggactc tgctgtcgga gcggttttgc ggtgtgtctt gccgtctgaa agtgcagatt
    14701 tggttttggg cgagtagccg acaggatcga ggatggcggt gtattcgcgt acctgtgcgc
    14761 ctgcgccgat gcggaacacc aggacgggat cgcggactgc ctgttcggaa gaaacggcaa
    14821 tgacggcttt gtcgcccaac ttgtggactt tggcggtcag gcctttttcg gaaacggtaa
    14881 cgctgccgcc gcctagcagg gctttggctt cttcgccggt tacggtaatg ctgccggaaa
    14941 agggttcgtc aaggttggac tggatattca gtccgcccag tccagcatgt gcctgaaagg
    15001 atgcggcaac tgcgacggag gcggcaatca gtttgatttg tctgttgttt ttcaagatgt
    15061 atcccctgtg ggttggcggc tgaatacggt ttgaccgcgt acagtctgta aatttcgtca
    15121 tcatcgggca tcggcggggc agtcggccgg cgggcattta atatgtgaat gtaccgaccg
    15181 ccgccacatt ttaaacggca atcattcgcc gtttttacaa attatgacat atctccatct
    15241 tttttcaaaa acatctgtgc atatttgcat caatcaaaac aaaatttgtt ggttttgcag
    15301 gtgcaaaaac agggttctgc ctgtatgatt agcgtttatt tgatttgctt tctcatttgg
    15361 atatgaaatt cgtcagcgac cttttgtccg tcatcctgtt tttcgccacc tataccgtta
    15421 ccaaaaacat gattgccgca acggcggtcg ccttggttgc cggtgtggtt caggcggctt
    15481 ttctgtattg gaaatataaa aagctggata cgatgcagtg ggtcggactg gtgctgattg
    15541 tgatattcgg tggcgcaacc attgttttgg gcgacagccg cttcattatg tggaagccga
    15601 gcgttttgtt ttggctgggc gcgctgttcc tgtggggcag ccacctcgcc ggtaaaaacg
    15661 gcttgaaggc gagtatcggc agggagattc agcttccgga tgccgtatgg gcgaaattga
    15721 cgtatatgtg ggtcggtttc ctgattttta tgggtatcgc caactggttt gtgtttaccc
    15781 ggttcgagtc gcaatgggtc aactataaaa tgttcggctc gactgcactg atgcttgttt
    15841 tctttattat tcagggtatt tatctgagta cctgtctgaa aaaggaggat tgactgtgga
    15901 atattttatg ttgctggcaa cagacgggga gaatgtgtat gaagcgcgta tggcggcacg
    15961 tcccgaacac ctcaaacggc tggagacgct gaagtcggaa ggccggctgt tgacggcagg
    16021 cccgaatcct ttgccggagg actccaaccg cgtttcgggc agtttgattg tggcgcagtt
    16081 cgagtctttg gatgcggcag aggcgtgggc ggaagacgat ccctatgttc atgcaggcgt
    16141 gtacagcgaa gtgctgatca agccgtttaa agcggtgttc aaataatgcc ggccgtcgat
    16201 ttgatccgcg aacgcctgca gacgctcgat ccgctggtgt tggaaatcgg cgatgagagc
    16261 catctgcaca aaggacacgc gggcaatacc ggcggcggac attatgccgt tttggtcgtc
    16321 agcggccgtt ttgaaggcgt aagccgcctg aaccgccaga aaacggtcaa atcgctgctc
    16381 aaagatttgt tttcaggcgg catgattcac gcgctcggca tccgggcggc tacccctgac
    16441 gagtatttcc atacggcgga ctgaatgaag tctgcccgaa catttcaatt taaaatttaa
    16501 agagagaaga ttatgaaagc aaaaatcctg acttccgttg cactgcttgc ctgttccggc
    16561 agcctgtttg cccaaacgct ggcaaccgtc aacggtcaga aaatcgacag ttccgtcatc
    16621 gatgcgcagg ttgccgcatt ccgtgcggaa aacagccgtg ccgaagacac gccgcaactg
    16681 cgccaatccc tgctggaaaa cgaagtggtc aacaccgtgg tcgcacagga agtgaaacgc
    16741 ctgaaactcg accggtcggc agagtttaaa aatgcgcttg ccaaattgcg tgccgaagcg
    16801 aaaaagtcgg gcgacgacaa gaaaccgtcc ttcaaaaccg tttggcaggc ggtaaaatat
    16861 ggcttgaacg gcgaggcata cgcattgcat atcgccaaaa cccaaccggt ttccgagcag
    16921 gaagtaaaag ccgcatatga caatatcagc ggtttttaca aaggtacgca ggaagtccag
    16981 ttgggcgaaa tcctgaccga caaggaagaa aatgcaaaaa aagcggttgc cgacttgaag
    17041 gcgaaaaaag gtttcgatgc cgtcttgaaa caatattccc tcaacgaccg taccaaacag
    17101 accggcgcgc cggtcggata tgtgccgctg aaagatttgg aacagggtgt tccgccgctt
    17161 tatcaggcaa ttaaggactt gaaaaaaggc gaatttacgg caacgccgct gaaaaacggc
    17221 gatttctacg gcgtttatta tgtcaacgac agccgcgagg tgaaagtgcc ttcttttgat
    17281 gaaatgaaag gacagattgc cggcaacctt caggcggaac ggattgaccg tgccgtcggt
    17341 gcactgttgg gcaaggcaaa catcaaacct gcaaaataat tctgaaaacg ggatacggcg
    17401 gcaagacgtt cagacaggcg ttttgccgcc gcgcaggaca gggaatacca tgaaacagaa
    17461 aaaaaccgct gccgcagtta ttgctgcaat gttggcaggt tttgcggcag ccaaagcacc
    17521 cgaaatcgac ccggctttgg tggatacgct ggtggcgcag atcatgcagc aggcagaccg
    17581 gcatgcggag cagtcccaaa aaccggacgg gcaggcaatc cgaaacgatg ccgtccgtcg
    17641 gctgcaaact ttggaagttt tgaaaaacag ggcattgaag gaaggtttgg ataaggataa
    17701 ggatgtccaa aaccgcttta aaatcgccga agcgtctttt tatgccgagg agtacgtccg
    17761 ttttctggaa cgttcggaaa cggtttccga aagcgcactg cgtcagtttt atgagcggca
    17821 aatccgcatg atcaaattgc agcaggtcag cttcgcaacc gaagaggagg cgcgtcaggc
    17881 gcagcagctc ctgctcaaag ggctgtcttt tgaagggctg atgaagcgtt atccgaacga
    17941 cgagcaggcg tttgacggtt tcattatggc gcagcagctt cccgagccgc tggcttcgca
    18001 gtttgcagcg atgaatcggg gcgacgttac ccgcgatccg gtcaaattgg gcgaacgcta
    18061 ttatctgttc aaactcagcg aggtcgggaa aaaccccgac gcgcagcctt tcgagttggt
    18121 cagaaaccag ttggaacaag gtttgagaca ggaaaaagcc cgcttgaaaa tcgatgccat
    18181 tttggaagaa aacggtgtca aaccgtaatg gcatttccaa taccgatgcc gtctgaagcc
    18241 ttttcagacg gcattgcacg ttcaggtaag gaggacggct tatgcgtgcg gtcatacaga
    18301 aaacggtagg tgcaaaggtg gatgtcgtgt ccgaaaacgg cacggaaacc tgcggcaaaa
    18361 tcgacggcgg attcgtcgta ctgctcggtg taacgcatag cgacatagaa aaagatgcac
    18421 gctatgtcgc cgacaaaatc gcccatttgc gcgtgtttga agacgaagcg ggcaagttga
    18481 acctgtcttt gaaggatgtc gggggatccg tgctgctggt gtcgcagttt acgctttatg
    18541 ccgatgcggc aagcggccgg cggccgtcat tttcgaaagc cgcacctgca gaacaggcaa
    18601 aacggcttta tctgcatacg gcagaactgt tgcgcgggca cgggattcat gtcgaaacag
    18661 ggcgtttccg tacgcatatg caggtgtcgc tctgcaacga cgggccggta actatactgc
    18721 tggactcttt catgacgcgg atttccccaa aaatgaaggt tgttccggat tgaaattgaa
    18781 tccgcaatga tgaaatatcg acaatgaacg acaatacaca cacccttccc ccgcgccgcc
    18841 tttccgtcgc cccgatgctc gactggacgg acaggcacta ccgttacctt gcccgccaga
    18901 ttacccgaaa tacttggctg tacagcgaaa tggtcaatgc cggtgcgatt gtttacggcg
    18961 acaaagaccg ctttttgatg ttcaacgaag gcgagcagcc cgtcgccctg caactgggcg
    19021 gcagcgatcc gtccgatttg gcgaaagccg ccaaagccgc cgaggcatac ggttacaacg
    19081 aggtcaacct caactgcggc tgccccagtc cgcgcgtgca gaaaggctcg ttcggcgcgt
    19141 gtctgatgaa cgaagtcggg ctggttgccg actgcctcaa cgccatgcag gacgcggtcg
    19201 gtattcccgt taccgtcaaa caccgtatcg gtgtggacag gcagaccgaa taccaaaccg
    19261 ttgccgattt cgtcggcacg ctgcgcgaca aaaccgcctg caaaaccttc atcgtccacg
    19321 cccgcaacgc ttggctggac ggtctttccc ccaaagaaaa ccgcgacgtt cccccgttga
    19381 aatacgatta cgtttaccgc ctcaagcagg agtttcccgg gctggaaatc atcatcaacg
    19441 gcggcatcac caccaacgaa gcaatcgccg gacacctgca acacgttgac ggcgtaatgg
    19501 tcgggcgcga ggcgtaccac aacccgatgg tgatgcgcga atgggacaga ttgttttacg
    19561 gcgatactcg cagcccgatc gaatacgccg atttggtgca gtgcctctac acatacagcc
    19621 aagcccagat ccaagccgga cgcggcacaa tcttgcgcca catcgtccgc cacagcctcg
    19681 ggctgatgca cggtttgaaa ggtgcgcgga cttggcggcg tatgctttcc gacgcgatgc
    19741 tcttgaaaga caacgacggc ggcctgattc tcgaagcgtg ggaagaagtc gaacgggcaa
    19801 atacgcgcga atagggcggg gctgtatgtg aaatgccgtc tgaaagtttc agacggcatt
    19861 tgtgcgtttg tcgggcggtg tttagggggt ggtaatggcg tgtttcggca ctttgtccat
    19921 atcccagtgt gccaccgccc agtcgagcag ttcggcaggg cggtcggttt ccggtgcttc
    19981 gggcagcttg aggtaacgga acacttggcg gaggagttgt tcgcggcggt ttaaatccaa
    20041 tgcgggggcg agcgtctgtt tcgaccattt ctgcccttgt gcgttggtca gcagcggcag
    20101 gtgggcatat tgcggtgtcg gaacgcccaa acactgctgc aaatagattt ggcgcggagt
    20161 ggaaacgagc aggtcttgtc cgcggacgat gtgggtaacg ccctgttcgg catcgtcggc
    20221 aacgacggcg agttggtatg cccagtaacc gtctgcacga agcaggacga aatcgccgat
    20281 gtcgcgggcg aggttttggg cgtaaccgcc gacgatgccg tctgaaaaac cgataatgcg
    20341 gtcggggacg cggatgcgcc acgccggctg tttgccttgc ggtgcagggc gttggccggg
    20401 gtggcggcaa cgtccgttat agacgaatcc gtctgcgccc cgccttgccc cggcctgcca
    20461 gtctttgcgg ctgcaatggc agggatagac cagtccggcg gtttgcagac ggcatagggt
    20521 ttcttcatac agggcgtaac ggtggctctg ataggcgact tctccgtccc actcgaatcc
    20581 gaatgcctca agcgtgtgca ggatatggct tgccgccccc ggcatttcgc gcggcggatc
    20641 gaggtcttcc atgcggacca gccatttgcc gccgtttgag cgtgcatcgg cataggaagc
    20701 ggcggcggtc agcagcgagc cgatgtggag cagcccggtc gggctggggg cgaaacgtcc
    20761 tgtgtacata tccggtacag cccctttatt taagactatg aatcaaagcc attatctcat
    20821 ctttattcag ttccatcccg ggctcttcaa gcaaggttaa atcatataga gcattatatt
    20881 gctcttcggt agctgaacca tccataaggc cggacgagaa aaaatcgaag gctctatctg
    20941 cgattctctc attacttgca tttctaccaa tcagtttcat caattctgta tatatagtat
    21001 ggggaggtac cggatcctta aaaattagat ctgaataaat ttcattgggt gaaatgattt
    21061 cgagtgcttt tgccatgatt ctatttcctt ttgtgttggt gggtaatgtc gtgcattaac
    21121 ttcttgttga ttaatatttt tagggtgaac ccactgtgtc cggtcaaaag ggcgatgccg
    21181 tctgaaagcc tttcagacgg catcggggat gaaaagttta aaccaacggt gcgagcagtt
    21241 tttcaaacgc ttcttcaaac tgtttcaaac cgtcttcctg caaacgcgcc gccaaggttt
    21301 cgacatcgat gccgagcgcg gcaatttcag cgagccgcgc ccgtgcttcg tccacgcctt
    21361 cggtcagcgt ggctttggct gtgccgtggt cgataaaggc tttgagcgtg gcatcgggaa
    21421 cggtgttgac ggtgtgcgcg ccgatcaggc tgtcaacgta gagcgtgtcg ggataggctg
    21481 ggtttttcac gccggtagat gcccataaaa gctgcacgcg gtttgcgcct tgggcttcca
    21541 gtgcggcaaa tttgggggcg gtgaaatatt gttcccaatc ttgataggcg gttttggcaa
    21601 gggcgatggc gattttgcct ttgaggtggt cgggcagcgt tgtgtccagc gcgccgtcca
    21661 cacgggagat gaagaagctg gcgacgacgt ggatatgggc aacgctttgt ccggctgcca
    21721 agcgtttggc aatgccgcgc gcgtaggcgg cgtaggcttt gagggtttgg gcgcgtgaga
    21781 acagcagcgt gaggtttacg ctgatgccgt ctgaaacgag gatttcgagc gcatcgatgc
    21841 ctgcgtcggt ggcaggcact ttaatcatcg cgtttttgca cccgatggcg gcgtagaggc
    21901 ggcgcgcttc ttctaccgtg ccttgcgcgt ctttggacaa ttcgggcgaa acttcgaggc
    21961 tgacgaaacc ggttttgccg ccggtggatt cgtgttcggc aaggcaaacg ccgcaggcgg
    22021 cacgcacatc ggcaaccgcc atggtttcgt agcgttgttt ggggctgagg ttttgctgct
    22081 tgagggcggc gatttcatcg gcgtaaagcg cgtcgccggc gaaggctttt tggaagatgg
    22141 cgggattgga agttacgccg cacacgcctt gtttcaacat ttgcgccaat tcgccgcttt
    22201 gcaccagcga gcgggaaagg ttgtccagcc agatttgttg tcctaatgct ttaacgtccg
    22261 ataaaatagt catttctgat tcctttggat ggatggcggg gtttgaatgc ttatgctacc
    22321 ccgattcgga aattttgggt agttttgtta cagcaaaggc ggatggcaat ggcagaaaac
    22381 ggaaaatatc tcgactgggc gcgcgaagtg ttgcacaccg aagcggaagg cttgcgcgaa
    22441 attgcagcgg aattggacga aaacttcgcc cttgcggcag acgcgttgtt gcactgcaag
    22501 ggcagggttg ttatcacggg catgggcaag tcgggacata tcgggcgcaa aatggcggca
    22561 accatggcct cgaccggcac acctgcgttt tttgtccacc ctgcggaagc ggcacacggc
    22621 gatttgggca tgattgtgga caacgacgtg gtcgtcgcga tttccaattc cggtgaaagc
    22681 gacgaaatcg ccgccatcat ccccgcgctc aaacgcaaag atatcacgct tgtctgcatc
    22741 accgcccgcc ccgattcaac catggcgcgc catgccgaca tccacatcac ggcgtcggtt
    22801 tccaaagaag cctgcccgct ggggcttgcc ccgaccacca gcaccaccgc cgttatggct
    22861 ttgggcgatg cgttggcggt tgtcctgctg cgcgcccgcg cgttcacgcc cgacgacttc
    22921 gccttgagcc accctgccgg cagcctcggc aaacgcctac ttttgcgcgt tgccgacatt
    22981 atgcacaaag gcggcggcct gcctgccgtc cgactcggca cgcccttgaa agaagccatc
    23041 gtcagcatga gtgaaaaagg gctgggcatg ttggcggtaa cggacgggca aggccgtctg
    23101 aaaggcgtat tcaccgacgg cgatttgcgc cgcctgtttc aagaatgcga caattttacc
    23161 ggtctttcga tagacgaagt catgcatacg catcctaaaa ccatctccgc cgaacgtctc
    23221 gccaccgaag ccctgaaagt catgcaggca aaccatgtga acgggcttct ggttaccgat
    23281 gcagatggcg tgctgatcgg cgcgctgaat atgcacgacc ttttggcggc gcgga
//
LOCUS       DAWGBY010000017        22274 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.017, whole genome shotgun sequence.
ACCESSION   DAWGBY010000017 DAWGBY010000000
VERSION     DAWGBY010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.017"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(120..1034)
                     /locus_tag="WHG62_000616"
     CDS             complement(120..1034)
                     /locus_tag="WHG62_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ1724774.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEYFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSSKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1290..2759
                     /locus_tag="WHG62_000617"
     CDS             1290..2759
                     /locus_tag="WHG62_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ1724775.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3011..3382
                     /locus_tag="WHG62_000618"
     CDS             3011..3382
                     /locus_tag="WHG62_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724776.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMIGNDVMQMLDPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3455..4864
                     /locus_tag="WHG62_000619"
     CDS             3455..4864
                     /locus_tag="WHG62_000619"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ1724777.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGREALD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFNATSSNDETVSFCVPSGNFGNVCAGHIAKQMGLPVR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWTEVAAGKGFDLQFALDKVGGKYGFTSGKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATICEAVGDVAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLD"
     gene            4910..5704
                     /locus_tag="WHG62_000620"
     CDS             4910..5704
                     /locus_tag="WHG62_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724778.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAARIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKSDAWLAGLEAIARVHKKQQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSVQP
                     AEIQRLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5893..6669
                     /locus_tag="WHG62_000621"
     CDS             5893..6669
                     /locus_tag="WHG62_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ1724779.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            complement(7327..9798)
                     /locus_tag="WHG62_000622"
     CDS             complement(7327..9798)
                     /locus_tag="WHG62_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ1724780.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGSDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRNLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISGGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVWQLAGKNLTLHILSGDRETAVAETARALGITHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRQIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMPSEKMPSEQ"
     gene            complement(9795..10973)
                     /gene="hflX"
                     /locus_tag="WHG62_000623"
     CDS             complement(9795..10973)
                     /gene="hflX"
                     /locus_tag="WHG62_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ1724781.1"
                     /translation="MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSAARLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLANLKKQRALRRKSRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(10978..12258)
                     /locus_tag="WHG62_000624"
     CDS             complement(10978..12258)
                     /locus_tag="WHG62_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ1724782.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHASYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            complement(12411..13136)
                     /locus_tag="WHG62_000625"
     CDS             complement(12411..13136)
                     /locus_tag="WHG62_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ1724783.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGRRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13209..13886)
                     /gene="radC"
                     /locus_tag="WHG62_000626"
     CDS             complement(13209..13886)
                     /gene="radC"
                     /locus_tag="WHG62_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ1724784.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQEGIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            complement(14009..15358)
                     /gene="gshA"
                     /locus_tag="WHG62_000627"
     CDS             complement(14009..15358)
                     /gene="gshA"
                     /locus_tag="WHG62_000627"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ1724785.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDALGMPRSEKDCDVDNVHNRLYVYGVMARLSLLAASIELEETA"
     gene            15618..17027
                     /gene="leuC"
                     /locus_tag="WHG62_000628"
     CDS             15618..17027
                     /gene="leuC"
                     /locus_tag="WHG62_000628"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ1724786.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17124..17378
                     /locus_tag="WHG62_000629"
     CDS             17124..17378
                     /locus_tag="WHG62_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724787.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17440..18081
                     /gene="leuD"
                     /locus_tag="WHG62_000630"
     CDS             17440..18081
                     /gene="leuD"
                     /locus_tag="WHG62_000630"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ1724788.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18256..19077
                     /gene="dcm"
                     /locus_tag="WHG62_000631"
     CDS             18256..19077
                     /gene="dcm"
                     /locus_tag="WHG62_000631"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ1724789.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDSTQKIGRTLTVILETLEALGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGAVTEEEKQLLNILLKERRKKNGLQKSA"
     gene            19092..19526
                     /locus_tag="WHG62_000632"
     CDS             19092..19526
                     /locus_tag="WHG62_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ1724790.1"
                     /translation="MPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGQRI
                     KDESLPKGYNIVSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGL
                     RLFGYPDDYSFDIPKKDRCDLLGNTVVVPVIKAVSERLLHTL"
     gene            19542..19703
                     /locus_tag="WHG62_000633"
     CDS             19542..19703
                     /locus_tag="WHG62_000633"
                     /inference="COORDINATES: protein motif:HMM:NF021105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ1724791.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGG"
     gene            19704..20273
                     /locus_tag="WHG62_000634"
     CDS             19704..20273
                     /locus_tag="WHG62_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ1724792.1"
                     /translation="MRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNTGPG
                     FDIADFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWA
                     INLQVKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKK
                     KFEEAYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20307..21377
                     /gene="leuB"
                     /locus_tag="WHG62_000635"
     CDS             20307..21377
                     /gene="leuB"
                     /locus_tag="WHG62_000635"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ1724793.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDVGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLNILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            21540..22103
                     /locus_tag="WHG62_000636"
     CDS             21540..22103
                     /locus_tag="WHG62_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ1724794.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSTTIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5365 a         5857 c         5792 g         5260 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttgctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatactc caacttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggcg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 aattttccgg atgatggtta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccctttt
     1261 acgaggcgcg atatataagg aggaaggtta tggaaaaaca taatgggact tatcgggatt
     1321 tgcaccgtcc ggcttcggaa tttgcgacgc gggacgaata tttggaacat gaattgcaga
     1381 ttatgcaacc aaaacgctgg cggcccaacc tgccctttcg cgattaccgc ttcgagtggg
     1441 aggatttgat tcctgcgatg gcgggaacga ttggaaaagt ggtgatggtg ggggcggtgg
     1501 cggcggcgtt tgccgcacct ttggggctgc ctgacagctt tgtactggaa aatgtgcgct
     1561 atgagctttt aatcgccgcc gcgtttatct tattggtatc gggctttttt ctgcccggcg
     1621 ccaacctgcc cggtacgcac gggccgctga ttccgatgat tcccatcgtt gtgtcggcag
     1681 gcgggcatcc tttggcgttc ggcatttcga ttgcggtttt aggtctgctg atggctttat
     1741 ttcgcggcgg cagtattatg gcgaagctga caagcaacgg cgtatgcggc ggattattac
     1801 tctatttggg ctttatcggc acgacggggc aggtaaaaaa attgttttcg tgggcaggcg
     1861 gttttaatat gccctacatc gcttttaccg tcattattgt aacgattgtg atgtacgctt
     1921 tgttggagca ttggaaaaaa cgctggttag ccgtgccttt gggatgcttg attgccggtg
     1981 tggtggcatt tgcattgggt gcgccgtttg agtttcacac cgcccccggc ctgcctccaa
     2041 tgagtcctgc ttattggtgg ggtgaaaaca gcggctggca tctggggttg ccgacggcag
     2101 aaagtttttt ggttgtcttt ccatttgcgg tattggctgt tgcaatgtgg tcgcccgatt
     2161 ttttaggaca tcaagtgttc caaaaaatca gctatccgga aaaaaccgat aaggtattga
     2221 tgaatataga cgacaccatg acaagttgtt ctgtccgtca agcagtgggt tctattttag
     2281 ggggtgcaaa ttttacctct tcttggggaa cttatatcgt accggcatcg attgccaaac
     2341 gccccattcc gggcggtgcg gttttaacgg cggttttatg tattatcgcc gggttgtggg
     2401 gctatccgat ggacttggcg atttggcagc cggtattgag cgtagccttg gtcgtaggcg
     2461 tatacttacc gcttttggaa gcgggcatgg aaatgacgcg caaaggcaaa accacccaat
     2521 ccgccgccat cgtggtgttc tcttccgcct tggtcaatcc ggttttcggc tgggcgttga
     2581 cgatgctgtt ggataatttg ggcttaatcg gctgcaaaga gcgcagtgcg caattaggtt
     2641 tcgccggacg cgtgttgata cccgcagtag gtttcttgat cttgtgtgtg gcgatgggtg
     2701 cggtcgggat gctgcccggt atcccgccgt ttttggaaca cttcaaatct ttgggctagg
     2761 ctgaaatcgg aaatgccgtc tgaaccgctt tcagacggca tttttgcaaa caggcaaaat
     2821 gacggcggcg ggatttttta ttttcccgat tgaagtataa tgttgccggg cttcaaccgg
     2881 atattcaaaa cggtttgttc caacactcgg aacggcgcat aaaacgccgc ccttcgcgtt
     2941 atcccgaacg gggcggctaa tcagattcta tcgccataaa aggcggggtt tcaaccgaaa
     3001 aggaattgag atgaataaaa ccttgtctat tttgccggtg gcaatcttac tcggcggctg
     3061 cgccgccggg ggcggtaaca cattcggcag cttagacggc ggcacaggca tgggcggcag
     3121 catcgtcaaa atggcggtcg ggagccaatg ccgtgcggaa ttggacaaac gcagcgaatg
     3181 gcgtttgacc gcgctggcga tgagtgccga aaaacaggcg gagtgggaaa acaagatttg
     3241 cgcttgcgtc gcccaagaag cacctgaacg gatgatcggc aacgatgtga tgcagatgct
     3301 ggatccgtcc acgcgcaatc aggcacttgc cgccctgacc gccaaaacgg tttccgcctg
     3361 cttcaaacac ctgtaccgct aaccttcttc agacggcatg aggcagatgc cgtctgaagc
     3421 cgttttcctg caatttcgac agacgagaaa aatcatgaaa tacatcagca cgcgcggcga
     3481 aaccgcacac aaaccgttca gcgaagtttt attgatgggg cttgcacccg acggcggcct
     3541 gatgctgccg gaacattatc cgcaaatcgg gcgggaagcc ttggacaaat ggcgcggttt
     3601 ggcttatccc gaattggcgt ttgaaatcat gcgcttgttc gttacggata ttccggagga
     3661 cgatttgcgc gacattctga accgtactta cacggaagcg gcgttcggta ctaaggaaat
     3721 cacccccgtc cgcacgctat cagacggcat caaaatccaa gccttgtcca acggcccgac
     3781 gctggcgttc aaagatatgg cgatgcagtt tttgggcaat gcgtttgaat atgttttaaa
     3841 caaagaaggc aaaaaactca atatcttggg cgcaaccagc ggtgatacgg gttcggctgc
     3901 ggaatatgcc ttgcgcggca aaaagggcgt aaacgtattt atgctgtcgc ccgatggcaa
     3961 aatgagtgcg ttccaacgtg cgcagatgta cagcctgcaa gacgggaata tccacaatat
     4021 cgccgtgaag gggatgtttg acgactgtca ggacattgtg aaggcggtgc agaacgatgc
     4081 cgcgttcaag gaaaaatacc atatcggtac ggtcaactcg atcaactggg gacgcatcgt
     4141 cgcgcaagtg gtttattact ttgcaggcta tttcaacgcc acttcaagca atgacgaaac
     4201 cgtcagcttc tgcgtaccga gcggcaactt cggcaacgtt tgcgcgggac atattgccaa
     4261 acagatgggc ctgcctgtcc gccgcctgat tgttgcgacc aatgaaaacg atgtgttgga
     4321 cgagtttttc aaaaccggcg cgtaccgccc gcgcaacagc gcgcatactt atgttacctc
     4381 cagcccgtct atggacattt ccaaagcgtc caatttcgag cgtttcgtgt tcgacctgat
     4441 ggatcgcgat cctcaggaaa tcaatacgct gtggacggaa gtcgcggcgg gcaagggctt
     4501 tgacttgcag tttgccttag acaaagtcgg cggcaaatac ggctttacct ccggcaaatc
     4561 tacccacgcc gaccgcctcg ccaccatcaa acaggtttac gagcaagacc aagaactcat
     4621 cgacccgcac actgccgacg gcgtaaaagt cgcccgcgaa gtgcgcgaag aaggggaaac
     4681 ggtggtttgt ttggaaaccg cgttggcagc gaaattcgat gcaaccatat gcgaagccgt
     4741 cggcgatgtc gccattccgc gtcccgccgc gctggaaggt ttggaaaacc tgccgcagcg
     4801 cgtgcaaacc gtgccgaaca gtgcggatgc ggtaaaaggc atcatcgaac aaacccttga
     4861 ctgatattcc gtgcgggggc attctgtcca aacttaagat tgaaagaaaa tgaccttacc
     4921 tatgcaggaa acccgttttt ccatactgct ggacgaatta gcggcaaaac aggaagcagc
     4981 catcgccccc cacctgcttg ccgacggaac caaggtatgg atacgcaaag caggcaggca
     5041 caatgcgcga tggcgttacg cgctgctcgg tatggttgcc cgatatttga aactgggggt
     5101 gttgaagccg gttcccagcc tcggcggcga gcctgccatt gcaaccgaat caaaacgcct
     5161 gtacgaattg cgcgcggcga ggatagccgt tcccgaattg ctcgccgtca ggaaaaatgc
     5221 ccttatgttc ggcaatttgg aaggcatccc gctcgatacg caaatccgcc aagaagccga
     5281 agccggaaag tcggacgctt ggcttgccgg tttggaagcc attgcacgcg tgcataaaaa
     5341 acagcagttc ctcagtcagg cgtttgcgcg gaatatgatg tcggacggaa aaaacatcag
     5401 ctttctagat tttgaagacg acccttccga agtcctgacc atagcgcaat gccaagcccg
     5461 cgattggctc tgctacatcc attcgaccgc gctgatattg aaaaacggcg ggctgctgga
     5521 agcggctgcg gaaaaatggg gcggcgtatt gtcggttcag cctgccgaaa tacaaaggct
     5581 gattgccgcc accgtcaaac cgatcctccc gatacgcagg ctggaacacc cacgctgggg
     5641 acgggacgcg ctcaggctgg cagcctcgat ttccctgatt tcccttgccg atatgccgcc
     5701 ttaagccgcc gccccgcccc gcgatgccgt ctgaagccct tcagacggca tataaccaac
     5761 gcgcatcaag cattgtcgca accatccgtt tcgtttagaa ttttgacttt atcccgaatc
     5821 gggcagacat ttctactctg ccgcacatcc cgaacaagca ctatccattt cttttactga
     5881 caggaaaccc aaatggcagc attcaatacc caaaaagtat tgtccgtaca ccactggaca
     5941 gacgcatatt ttacctttac ctgcacccgc gacgaatcgt tgcgctttga aaacggacag
     6001 ttcgttatgg tcggattgat ggtggacggc aagccgctga tgcgcgcata cagcgtcgcc
     6061 tccgccaact gggaagaaca cctcgaattt ttcagcatta aagtccaaga cggtccgctg
     6121 accagccgcc tgcaacacct caaagtcggc gacgacgtgt taatcagcaa aaaaccgacc
     6181 ggaaccctgg ttgccggcga cctgaatccg ggcaaacacc tttacttgtt gagcaccggt
     6241 accggcatcg ctcctttctt gagcatcacc aaagaccccg aaatttacga gcaatttgaa
     6301 aaaatcatcc tcgtacacgg cgtgcgctac aaaaaagatt tggcgtacta cgaccgcttt
     6361 accaaagaat tgcccgaaca cgaatacctc ggtgacttgg ttaaagaaaa actgatttac
     6421 tacccgattg tttcgcgcga agaattcgaa caccacggtc gcctaaccga cctgatggtg
     6481 agcggcaaac tgtttgaaga catcggcctg cccaaaatca acccgcaaga cgaccgcgcg
     6541 atgctgtgcg gcagccccgc gatgctgaaa gatacctgca aagttttgga cgatttcggt
     6601 ctgaccgtct ctccgaaaac cggcgtgcgc ggcgattacc tgattgagcg cgcgtttgtg
     6661 gatcaataag ctgcttgaaa atgccgtctg aacggcatca gcgataaaaa aacccgaatc
     6721 ctgccaatca ggattcgggg tttttatagt gggtaaaaat tagaaatgca catttccgtc
     6781 attccaacac aggtgggaat ccggacttac ctgtttcatt atcgtttgaa aataaaagag
     6841 aaaccaaaca tatagattcc cgcttgcgcg ggaatgacga cggtgttttg ccgtagccaa
     6901 agcagaaaaa catccctatt gtcatttcat catgatatga caataggatg ttaaaaatta
     6961 attatcatta tatgattgat atataagaaa aactgtccca ataagaaatg ttatgcagaa
     7021 aataaaatga aaaggatggt tttcattgaa aatggttgtt ctgccaccgt catacacaga
     7081 gccagtattt ggaaaaaaaa taatccatat tgacatcatt attccatttg tcgcataaat
     7141 ccacttttta attttttttc ctcattaata taatctctta tttaataaaa tcaaatacct
     7201 agcaattcga tctcaaattt taaacgccaa cgtgtttgag cggtaacaat gcatacttta
     7261 agtttgtaat ccttcatcgt ctcatttttg ttttaatcga ctatacgtct aaagcaacgc
     7321 cgtccgtcat tgttcggacg gcattttttc agacggcatt ttcccccgtt tgtgaaggcg
     7381 caaggcattg cccaaaaccg ccagcgaact gaaactcata cccagtgcgg ctatccacgg
     7441 ttggacatag cccaaaacgg caagcggtac ggcaatgata ttgtacgcgc ccgcccatat
     7501 caggttttgc cggataatct gccgggtgcg ccgcgcctga tcgagcaggt gggcgacggt
     7561 acgcaaatct tcgttcaata acacaatgtc cgcgccgtcc ctcgcaatat ccgtcccgcc
     7621 cgctgcggcg gcggatacgt ctgcctgcgc caaaacgggc gcgtcgttga tgccgtcgcc
     7681 tatcatcagt acttttttcc cttctttttg caaggctttg acgtattcca gtttgtcctc
     7741 gggcatggct tgggcgcggt agtgcgtgat acccagggcg cgggcggttt cggcaacggc
     7801 ggtttcgcgg tcgccgctga ggatgtgcag ggtcaggttt ttgcctgcca actgccacac
     7861 cgcctccgcc gcgctgtctt tcaaggggtc ggtcaggtag aacacggctt ggaaaccgct
     7921 ttgactgccg aggtaaaccg cgctgccgcc gccttctgtt tgcggttctt tacctgaaat
     7981 ttcggcgaca taggatgccc tgcccaatgc ccaaacctgt gtttcgccgt tgacggtcag
     8041 ttgcgcgccc acgccttcgc cgatgcggtt gaggcgttgt ttaatagcaa tgtcggggac
     8101 gctgccgcct gaaatgcggc agttgaggat ggcgcgggca aggggatgtt cggactgttg
     8161 ttctaaagcc tgcgccaccg cgagaacaaa ggcttcgtct gtgcctctca acaatgagat
     8221 acggcggacg gcgggtttgc cttgggtcag cgtgccggtt ttgtcgaaga tgatgtcggt
     8281 ggtttgggcg agggtttcga ttgcctgctt tccgccgatt aaaatacctt cgcgcgccag
     8341 cgtaccggta gaagctgcca gcgcggtcgg cgtggcaagc gataaggcgc aggggcaggt
     8401 aatgaccagc agggcgacgg taatccacaa tgcggtgtgc gcgtcggcgt acagcgtcca
     8461 gccgatgaag acggggacgg caagcaggag ttcgccgaat atgaaagacg aggcgtattg
     8521 ttccgccaac tcggcagtgc gcggtttttg cgctaaggcg cggtcgagca ggcggacgat
     8581 gtgcgacagt cgcgtgccac cgccggtgcg gtcggtgcgt ataatcaggg ggctttgcgt
     8641 gttgagtgtg ccggcggtta ctttttcaga cggcattttg gcgacgggca ggctctcgcc
     8701 ggtcagcata gattcgttga cggcactgct tccttctagc accgtgccgt caacggggat
     8761 ggtttcgccc ggtttgacca gcacgatatc gcccgccttc aatttgacga cagctgcctc
     8821 gcaggtttcc tgcgtatcgg ggtaatcggg catatgatgg caaaacgcag gaatcagctt
     8881 caccagcctc tcggcggcat cgcctgcctt acggcgggca atgtgttcca taaagcgtcc
     8941 gcccagcagg aaaaacagca gcatcgcgat ggattcgaaa tacatcccct gccccgcatt
     9001 tgtcgcaagg ctgtaaacgc cggcgataaa ggtcatgatg atggcgacgg taatcggcgt
     9061 atccatgccg acgcggcggt ttttcaagtt gcgcagcgcg ccttgataaa acgggacggc
     9121 gcaatagaat acgacgggca gcaccattaa aaagccgccc caatggagga tttgcaggaa
     9181 atcgggttcg atgtcgctgc cgtaaaggta ggtcggcagc gcgaacatca tcgtctgcat
     9241 catccccagc ccggcaacgg cgaggcggac gatgtattgt ttgcgttctt tttggttggc
     9301 ggcttcgatt ttttgcgcgt catagggtgc ggcggtgtag cctatctgcc tgattttcaa
     9361 cagaatgtcg gaaaggcgga ttttgccgtc gtcccagacg acgcggcagc ggtgcgtgct
     9421 gtaattgagg tcgatgcgga cgatgccgtc tgtacgcaaa agctgctgtt cgatcagcca
     9481 gacgcaggcg gcgcaggtga tgccgccgag cattaaaacc gcctcgcgcg tgccgccgtg
     9541 ggtttccaca aagtcggact ggacttcggg caggtcgtac aggcggattt ggtcgaggat
     9601 ttcttggggc ggcagctcgg ttttttgcgc gtcggcggtg cgttgtttgt aataactgcc
     9661 caagcccgcg tcaataatgc tttgtgcgac cgcctgacag ccggcgcagc aggtttcgcg
     9721 gtcttcgttt tcgtaacgga cagtcaggtg gaggtgttcg ggaacatcca gaccgcagtg
     9781 gaaacaggtt tttttcatgg catttcggtt tcgtctgtgt ttggtgcggc ggcacaagac
     9841 tcggcaatgg cttcgcgcag tgcgtctata ccggtatttt cagcaacgga aatgcggacg
     9901 gcggcaattt ttcccgcagc gtcgcgccat atgcccgtgt tttgttcttc agacggcagc
     9961 aggtcggttt tgttgtacac cttgatgcac ggaatatcgc cggcatggat ttcttgcagt
    10021 acgttttcca cgtcttcaat ctgctgtccg ctgttcggag cggcggcatc gacgacgtgc
    10081 agcagcacat cggcttgcgc ggtttcttcc agcgtggcgg aaaaggcgga aatcagtttg
    10141 tgcggcagat cgctgacgaa tccgacggta tcggtcagga taatgctgca ttcgggactg
    10201 atgtacagcc gccgcgccgt cgtgtcgagt gtggcgaaaa gctggtcttt cgcatatatg
    10261 cccgacttgg tcagccggtt gaacaggctg gatttgccga cattggtata gccgaccagc
    10321 gcaaacgttt tgattgtgcc cgattcgcgg gacttgcggc gcagggcgcg ctgttttttg
    10381 aggttggcaa gctgtttttt caaggcattg atccgatggg cgatcaatcg gcggtcggtt
    10441 tccagtttgg tttcgccggg gcctttcatg ccgataccgc cgcgctggct ctgcagatgg
    10501 ccgtaaccgc gtatcaagcg tcccgccaaa tggctcaatt gcgccaactc gacttgcagc
    10561 ctgccttcct gcgtgcgggc gcggcgagcg aaaatcgcca gaatcagccc taccctgtcc
    10621 aatacgcggc atttcagttc tttttcaagg ttgcgttcct gcgtgggcgt gagttcgtgg
    10681 ttgaatacga ccaaatcgat gccgtctgcg gcaactgctt ctgacagctc cgccgccttg
    10741 cccgtgccga caaacagcgc ggtgtgcgga cggtcgcgtt tggcagtctc cacgcgcacg
    10801 gaatcgccgc ccgccgcttt gaccagctcg acagcttccg ccaatgccgt ctgaaaaccg
    10861 ttcagacggg cggcactact gcccgtacca tctttgtcca acattacgcc caccagcatg
    10921 acgcgttcgg gttgcgcttg ggtactgccg ttgccgcctg ttctgcctgt catgtattca
    10981 atcctgtaaa taaagggtta cgcctcgttc cgtttctcct tccggtgcaa gcgtgatgcg
    11041 gctgcccgcc attccgtcaa cgctgaagac gatgccgccc gcctcgtgcc ttcctatgga
    11101 caggcggctg ccgggtcgct gccggtaggt ataacgggta cacgcttcca aacaccagcg
    11161 tccgcgccag tggatgaaat atttttcgcc ttttctaacc gcaagtgtct cgccgccgtt
    11221 tacctcaaaa taagggtaat cgggttttcg ggttctaaac tgccatttcg cctgcgcgcg
    11281 ccgtccgttg cggacatagt cgaataccgc cgtataaagc gtgccgtatt ccaaaggctt
    11341 gagcggaaaa agcgcgaatt ggtacgcggt cagcctgccg ttggggtcgt tgccggcggt
    11401 taaaaccctg acggggcgga tttcgttttt accctgatac agcttgaaac ttttcatcgt
    11461 aattttgcct gccgcctcgg aaaaatcaat gctggcagga ttgcccgtga tttcatattc
    11521 cggcacgggg tctggacgct cgccgtggaa ataaggcagt gcgccgctgc cgacgggata
    11581 ggctgtatag agcagctcct gtgcgggcat ggcttcgtcg gtgtacacga ccgcaccgtt
    11641 atggcaggcg ttgcggtaat atttccgtcc tgcttccggc tgatttctgc cttgggcgca
    11701 atgccgctca aacctgccgt tgccctgatt gaatacgaga acggttttac cgttttcgcg
    11761 cacaaatgcc gctcctgcct catccgtatg gcggtcaagt agggaaaggc ggtggtagat
    11821 tgcgctcatt aatccgtcca cttggcgttg ctgcgtgcgg atgtcgctgt cggacgattc
    11881 ggcggcttct tcttccgtgc tgatgttttc atgcacgccg ttgtagagat acccggcaag
    11941 gcgtgtgcgt tcggtcagct tttgtgcggt gtagtgcgga ttgtcgggat ggtgttcgcc
    12001 gtgtccgtct tcgggattga gcgtgaggta gcttgcgtgc ctgcgggcgg agttttccaa
    12061 aaccggcgcg tgtgccagct tgtgcaaacc gatttgggct cggatgcggt tgaggtagtg
    12121 cagcgcatcg ccgccgtccc tgatttgcgg tgcggacgga tagacaagtt cgcccgcggg
    12181 cagggattgg ttttgggtat ggtagaaaac gcctgccgcc gaacccaaca ggagcagccg
    12241 aataaaaagg gatttcataa tgccgtcctc ccgacgcggc aacggggtgt tttatcaaaa
    12301 cggcaaactt gccaatgcgg tttccgattg cagattgcca aaccggcaaa cctttccccg
    12361 tgccgatgcc gaacccgatg ccgtctgaac cttcagacgg catcgggtgt ttatttgtcc
    12421 acccggatgg gggcaggttc gtattgtgtc gattcgtcgc cgtaatacag cacgccgagt
    12481 ttgatgggaa tgcgtccctg cgatttgcgg tgggcattgg aatcgcgcaa ggaataggcg
    12541 caaccgcaat attcctgctg gtagaagttt tcacgtttgc tgatttcaat catgcgcgcg
    12601 ctgccgccgc ctttgcgcca gttgaaatcc caatacacca catcatcgta aggcgcggcg
    12661 gcacggcggc cgcaatcgtt gatttgcgcc atatttttcc agcgtgaaat gcccagcgaa
    12721 ctggtaaaga cggggaaccc gtgttcatgc gcgtattgcg ccgccttttc gaaacgcata
    12781 tcgaaacaca tggtgcagcg gatgccgcgt tccggctcaa actccatgcc tttggctttg
    12841 gcaaaccatt ctttgcggtc gttttcgtaa tcgtcgtctt tgtcgatgaa agggatgccg
    12901 aacttttccg caaagcgtac gttttcctct tttcggagca tatactcttt atgcggatgg
    12961 atattgggat tgtaaaaata aatggtgtaa tcaatgccgc tggccagcat ggcttccatc
    13021 acttcgccgc tgcacggggc gcagcaggaa tgcagcaaga cttttttatg tccgccgggc
    13081 gggacgagta tggggcggtc aatgtcggta acggtaggtt tgttttgtgt ttccattaac
    13141 ttaacaatat ctgtcgaata cggttgaagc ggctatttta tcagagccgc cgcatgtaaa
    13201 acagggtgtc agggcatcag cccgagctgt ctgaacgaac ggacggtttg cgccgttacg
    13261 ataaaatggt cgagcagcga cacatcgacc agcgacattg cctgtgccag ccgccttgtg
    13321 aacatgatgt cttcctgcga aggttcgggc gagccgcccg gatggttgtg cgcgataatc
    13381 aggctgtcgg catattcgtc caatgccagt ttgacgattt ctcggatgta aatcgtgttt
    13441 tccgcaaccg taccgcgcga cagctctctg accgcaatca gttggttttg gcggttcagc
    13501 agcagtgcga cgctgacttc gactttttcc tgtcccaaat gaaagcgcag gtaatcggca
    13561 accgtatcgg ggtcggacag gacgatgccc tcctgcaatt cttccgccaa tatccgccgc
    13621 ccgatttccc tgaccacggc gaactgtgtg aaacttgccg tccccatccc tttgtatgcc
    13681 gacagtttgc cgacctccgc gctcatcagc ctccccaaac tgccgaactc ctgcagcaaa
    13741 taacgcgcca aatcgaccgc actcattccg cgcgtgccga cgcgcagcag gattgccaaa
    13801 agttcggcat cactcaaagc cgccgccccg cgttccaaca gcttttccct gggcctttcg
    13861 ccttccggcc attgcttgat gctcatgttt tccctttttt aaatagtctg agatgccgtc
    13921 tgaaacaaat gttcccacac gccaaatatc cgaaatgccg tctgaaccgg atttccgctt
    13981 cagacggcat ctgtatttca aaacagtctt acgccgtttc ttccaactcg attgaagccg
    14041 ccagaagcga caggcgtgcc atcacgccgt acacatagag gcggttgtgg acattatcga
    14101 catcgcagtc tttttcagaa cgcggcatac ccagcgcatc ccattgctca aatacgcgct
    14161 tgcaggcttc gggtgcttct tgggaattat cgccattgcc ggtaggaatg ctattggaca
    14221 gcggcacaaa caccataccg ccggcgttga ggttttcgtc cgcaccgcgc ccttcgtgta
    14281 cgcggaaaaa gccgccgatg acgaagcggt ccatcatata cacgacgggt tcgcacaccg
    14341 cgccgtttaa ggtttcataa gtataaatcc cttcttggac aatcacttcg ctgacttcca
    14401 agccttcttt gactttcgcc attttattgc ggtttttacg gttcaatccg cgcacttcgt
    14461 cggcggattt gacgctcatc acgcccatgc cgtaagtgcc ggcatcggct ttgacgatga
    14521 cgaaaggttt gtcggtaatg cccgattcgt cgtatttggc ttgaattttc gccagcacac
    14581 gttctaccgc ttccgccaac gcgtcttcgc cttcacgccc ttggaagtcc aaaccgccga
    14641 ttttttcaaa ataagggtta atttgccatt cgtcgatgcc gattaacttg gcaaattcgg
    14701 cggcaacttg gttgtacgcg ccgaaatgat ttgttttgcg gcgcgtcgtc caaccgccgt
    14761 gcaacggcgg caaaacggtt tggctgatgc ctttgaggat gtcgggaatg ccggcagaca
    14821 aatcgttgtt caacaaaacc acgcaaggcg aaaagccgtc tgcaagatgg acgcggtcgc
    14881 gggtacgcaa taaaggttcc aacaggattt tgtcgcccaa tgcagtttca aattcggtcg
    14941 gttcggttac ttccggattc aggctgccca agcgcacttc ataccctgcc gaacgcaaaa
    15001 tctcgccgag ggcgtaaatg ttttgcaggt aaaacgtatt gcgcgtgtgg ttttcgggaa
    15061 taatcaatac ggatttcgcc gtttcgcagg cgcgttgcac cgcatcttgc gcggcaaccg
    15121 ccgccagcgg gataaagttg ggattcagat tattgaagcc gccggggaac aaattcatat
    15181 cgatagacga aattttgtaa ccggcattgc gtatatcgac cgaaccgtaa aacggcgggc
    15241 ggtgtacgct ccactgcgta cggaaccacg cctcgatttt ggcgtgattg gacaggattt
    15301 ttgcctcaaa cgcctgaagt tgcgccgaat gttcgggcga catcaccggt aatttcatct
    15361 ttcgtctgcc tctgtgtgtt ttttgacaag atgcagatga taatgccttt gaaagaatga
    15421 cgacaagtat tctttcgtat cgaatcatgc tttagatata actgtttact gaaatggaca
    15481 atacgtctaa ttttttcgtt aaaattgttt gcaaaataac accggctcaa aaattagaca
    15541 aaatttgttg cgcggtataa agaatacgtc taaaatctgc ccaatccgca ttaccattta
    15601 tccaaaagaa caacatcatg acagcacaaa ccctctacga caaactttgg aacagccacg
    15661 tcgtccgcga agaagaagac ggcaccgtcc tgctctacat cgaccgccat ttggtgcacg
    15721 aagttaccag ccctcaggca tttgaaggct tgaaaatggc ggggcgcaag ctgtggcgca
    15781 tcgacagcgt cgtctccacc gccgaccaca acaccccgac cggcgattgg gacaaaggca
    15841 tccaagaccc gatttccaag ctgcaagtcg atactttgga caaaaacatt aaagagtttg
    15901 gcgcactcgc ctattttccg tttatggaca aaggtcaggg catcgtacac gttatgggcc
    15961 ccgaacaagg cgcgaccctg cccggtatga ccgtcgtctg cggcgactcg cacacttcca
    16021 cccacggcgc attcggcgca ctggcgcacg gcatcggcac ttccgaagtc gagcacacga
    16081 tggcgaccca gtgcattacc gcgaaaaaat ccaaatccat gctgattgcc gttgacggca
    16141 aattaaaagc gggcgttacc gccaaagacg tggcacttta catcatcggg caaatcggca
    16201 cggcgggcgg tacaggctac gccatcgagt ttggcggcga agccatccgc agcctttcta
    16261 tggaaggccg catgacttta tgcaatatgg cgattgaggc aggcgcgcgc tcaggcatgg
    16321 ttgccgtcga ccaaaccacc atcgactatg taaaagataa acccttcgca cccgaaggcg
    16381 aagcgtggga caaagctgtc gaatactggc gcacgctggt gtctgacgaa ggtgcggtat
    16441 tcgacaaaga ataccgtttc aacgccgaag acatcgaacc gcaagtcact tggggtacct
    16501 cgcctgaaat ggttttagac atcagcagca aagtgccgaa tcctgccgaa gaaaccgatc
    16561 cggtcaaacg cagcggtatg gaacgcgccc ttgaatacat gggcttggaa gccggtacgc
    16621 cattaaacga aatccccgtc gacatcgtat tcatcggctc ttgcaccaac agccgcatcg
    16681 aagacttgcg cgaagccgcc gccatcgcca aagaccgcaa aaaagccgcc aacgtacagc
    16741 gcgtgttaat cgtccccggc tccggtttgg ttaaagaaca agccgaaaaa gaaggcttgg
    16801 acaaaatttt catcgaagcc ggttttgaat ggcgcgaacc gggctgttcg atgtgtctcg
    16861 ccatgaacgc cgaccgcctg accccggggc aacgctgcgc ctccacctcc aaccgtaact
    16921 ttgaaggccg tcaaggcaac ggcggacgta cccacctcgt cagccccgct atggcagcag
    16981 cagccgcagt gaccggccgc tttaccgaca tccgcatgat ggcgtaagta ttttcaggcg
    17041 gtctttaaga atttgacgcg gccgtctgaa atatgtcccg taaggcagaa acacctttaa
    17101 tattcaaacc aaggagttta accatgaaca aacttttcat taccgccctg tccgccctcg
    17161 ccttgtccgc ctgcgccggc acttgggagg gcgcgaaaca agacaccgcc cgcaaccttg
    17221 acaaaacaca ggccgccgcc gaacgcgccg ccgaacaaac aggcaacgcc gtcgaaaaag
    17281 gctgggacaa aaccaaagaa gccgtcaaaa aaggcggcaa tgccgtcgga cgcggcattt
    17341 cccatctcgg cggaaaaatc gaaaacgcca ccgaataacc gattcgcgat gccgtctgaa
    17401 accgcttcag acggcatcgt cagcacaaga cgcaaaccca tgaaagcctt taccaaaatt
    17461 accgccatcg tcgccccgct cgaccgcagc aacgtcgata ccgacgccat catccccaaa
    17521 caatttttaa aatccatcaa acgcagcggc ttcggcccca atgcctttga cgaatggcgt
    17581 tacctcgacc acggcgaacc aggcatggac aacagcaaac gcccgttgaa ccctgatttc
    17641 tcgctgaacc agccgcgtta ccaaggcgcg caaatcctgt tgacgcgtaa aaacttcggt
    17701 tgcggctctt cacgcgaaca cgccccttgg gcattggacg actacggctt ccgcgccgtc
    17761 atcgccccca gcttcgccga catcttcttc aacaactgct acaaaaacgg ccttttacct
    17821 atcgtgttga ccgaagaaca ggttgaccgg cttttcaaag aagttgaagc caacgaaggc
    17881 tatcagctct ccatcgacct tgccgaacaa accctgacca cccctggcgg cgaaacattc
    17941 acattcgaca ttaccgaaca ccgcaaacac tgcctcttaa acggcttgga cgaaatcgga
    18001 ctgaccctgc aacatgccga tgaaattcac gcctttgaag aaaaacgccg ccaaagccag
    18061 ccttggctgt ttaacggtta aaacctatgc cgtctgaagg ccgttcagac ggcattcctg
    18121 ataacatata attgttgcgg ctaatgtaaa cagaggggcg ataaattgct ttcatctttt
    18181 aagcgggctt agcgacactc taaattaatg caataatgca actctccatt tcaaataaat
    18241 ttttagattt ttaatatgca acaaattaaa tttattgact tattttccgg aatgagtggc
    18301 atcaggaaag gattcgaaca agcctgtcgg aaacagtcgg ttgcttgcga atgtgttttt
    18361 acttcagaaa tcaaaccggc agctttggaa gtattgaagc aaaactaccc tgatgaagtg
    18421 ccgtatggag atataacgaa aattgaaaca ggggatattc ccgattttga catcctgttg
    18481 gcaggcttcc cttgtcaggc tttttctttc gccggaaaaa gattaggctt tgaagataca
    18541 cggggaacgc ttttctttga tgtggcaagg attttaaagg caaaaaaacc aaaaggtttt
    18601 attttggaaa atgtggaagg attggtgaca cacgatagaa aagattcgac acaaaaaata
    18661 gggcgcaccc tgaccgttat tttggaaacc ttggaagcat tgggctacta tgtttcttgg
    18721 aaagttttaa atgcaaaaga tttcggcatt ccccaaaaca ggaagcgcat ttatctgaca
    18781 ggcagtttga aatccaaacc cgacttatct ttcgaaacaa gcccaagtcc gaaattaaaa
    18841 aatattttgg aatcgggact gcctaccgaa agcagccctt tcatcaaaaa attgctaaaa
    18901 aaatttcccc cgtccgaact gtacggaaaa tcagtaaaag acaaacgggg agggaaaaac
    18961 aatattcaca gttgggatat tgaattaaaa ggcgcagtaa ccgaagaaga gaagcaattg
    19021 ttaaatatcc ttctaaaaga acggaggaaa aaaaatgggc ttcagaaatc ggcatagatt
    19081 ggatggatgg gatgcctttg acaaaagcgc aaatttcaac tttctataaa caccccaatc
    19141 tccaaaatat tttggacagc ctgacagata aaggctattt ggttttagag catccgaaac
    19201 aaaaaattgg cgggcaaaga atcaaagatg aatccctgcc caaaggctac aatattgttt
    19261 caggtaaaaa atcttttgaa atcaataaaa tattagatcc aaacgatgtt gcgccaacct
    19321 tggttgcaat ggatatggag caccttttcg tcgttgacaa cggcggtttg cgtacactta
    19381 ccggaaaaga agggttgcgc ttattcggct atccggacga ttattcgttt gatattccca
    19441 aaaaagacag atgcgattta ttgggtaata ccgttgtcgt ccctgtgatt aaggcggtat
    19501 ctgaaagact tctgcatact ttataaaccg acagggataa aatgataaaa cttactgcac
    19561 aacaaatatt tgataagttg ctggatgaag aaaaaatctt atcggccaat ggtcaaatta
    19621 gatttttctt aggcgatgtg gatattatcg tcaaacaaaa agatgttgtc ggcaacatca
    19681 ttcaggaatg gctcggcgga tgattgagaa aaagggaaat tgaatttgat gtttcaacca
    19741 atacccaaat gcctcccgat ttctttttaa ataaaaaaga ccgcagcaga gaattgttgg
    19801 aagtaaaggc gttcaaccga aataccggcc cgggttttga tattgcagat tttaaaatgt
    19861 attctgatga aatcattcat aagccctata tgctggatgt agactattta atattcggtt
    19921 acgatatgga cgacaacggc aatgtaacca tcaaggattt atggcttaaa aaagtatggc
    19981 aaattacgag aagcatggat gggtgggcaa ttaatcttca agtcaaaaaa ggcgtggtgc
    20041 ataaaatccg cccgggtgtt tggtacagca taaataaaaa gaatatgcct atgtttgaat
    20101 gcttggaaga ttttgtttcc gcaattgaag aaaccgttta tcaaaacccg gcaacacggc
    20161 ataacgcatc cttatggaaa aagaaatttg aggaagccta taaaaaacac tacaaccgat
    20221 cgatttccat acctcgttgg cacgaaattg cacacaaata caaaaagaaa taacccttca
    20281 accatcaacc cataaggaaa cttgaaatga ccaaacatat cgccatcctc cgaggcgacg
    20341 gcatcggtcc cgaaatcgtc gccgaaaccg tccgcgtact cgacaaactt atcgcccaag
    20401 gcttggatgt cggctacgaa tacgcgcctt tgggcggcga agcctatgac gaatacggcc
    20461 atccttatcc cgaatttacg caaaacctct gccgcaaagc cgatgccgtc ctgcttggtg
    20521 cagtcggttc tcctcaatac gacaacctcg accgtccgtt gcgccctgag cgcggcctgt
    20581 tggcaatccg taaggatttg aacctgtttg ccaatttgcg tcctgctgtt ttatatcccg
    20641 aattagccaa cgcctccacg ctgaagcctg aaatcgttgc tggtttgaat attttgattg
    20701 tgcgcgaact caccggcgac atctatttcg gcgaaccgcg cggcatccgc gttctggaaa
    20761 acggcgaacg cgaaggctac aacaccatga aatacagcga aagcgaaatc cgccgcatcg
    20821 cccacgtcgc tttccaatcc gcccaaaaac gcagcaaaaa agtctgctcc gtaggcaaag
    20881 ccaacgtttt ggaaaccacc gaactgtggc gcgaaatctt tgaagaaatc ggcaaacaat
    20941 atcccgatgt cgaactttcc catatgtatg tggacaacgc cgctatgcag ctcgtgcgcg
    21001 cgcccaaaca gtttgacgtg attgccaccg gcaacatctt cggcgacatc ctctccgacg
    21061 aagcctccat gctgaccggc tccatcggta tgctgccttc cgcttctttg gacgaaaacg
    21121 gcaaaggcct gtacgaaccg tcccacggct ccgctcccga catcgccgga caaaacaaag
    21181 ccaacccgct ggccaccatc ctctcgctcg caatgttgct gcgttacagc ctgaacgacg
    21241 aagcgcgcgc gcaacaagtt gaaaacgccg tccaaaaagt gctgcaacaa ggcttgcgta
    21301 ccagcgacat ttacgaagaa ggcacaaaac tcgtttcctg ctccgaaatg ggcgatgcgg
    21361 tactcgccgc cttgtaaaaa aacaaagcgc ggatcacacc gcgctttttc atctgccctt
    21421 ttccgctcgc cccgttcgtc aaccgcctgc aaacccaccg tttaccggca ggaaatgcca
    21481 taaatccccg cctatgttag gataaacgcc tttactggct cacacaaagg attatcatca
    21541 tgaaaaaaat catcttcgcc gcactcgcag cggcagccgt tggcactgcc tccgccgcca
    21601 cctacaaagt ggacgaatat cacgccaacg cccgtttcgc catcgaccat ttcaacacca
    21661 gcaccaacgt cggcggtttt tacggtctga ccggttccgt cgagttcgac caagcaaaac
    21721 gcgacggtaa aatcgacatc accatccccg ttgccaacct gcaaagcggt tcgcaacact
    21781 ttaccgacca cctgaaatca gccgacatct tcgatgccgc ccaatatccg gacatccgct
    21841 ttgtttccac caaattcaac ttcaacggca aaaaactggt ttccgttgac ggcaacctga
    21901 ccatgcacgg caaaaccgcc cccgtcaaac tcaaagccga aaaattcaac tgctaccaaa
    21961 gcccgatggc gaaaaccgaa gtttgcggcg gcgacttcag caccaccatc gaccgcacca
    22021 aatggggcgt ggactacctc gttaacgttg gtatgaccaa aagcgtccgc atcgacatcc
    22081 aaatcgaggc agccaaacaa taaatcttga tgcgaatcag cacaaatgcc gtctgaacgt
    22141 ccttcaaacg gcatttgtgc cgtcttcatc aaaccgcccc gccaacggta agccgatatg
    22201 gcggagcaca atccgccgaa agatatttca gcggcaggca gggcttgccg gaaagtccgg
    22261 aaagtatagt ggat
//
LOCUS       DAWGBY010000018        21516 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.018, whole genome shotgun sequence.
ACCESSION   DAWGBY010000018 DAWGBY010000000
VERSION     DAWGBY010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21516
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.018"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(79..771)
                     /locus_tag="WHG62_000637"
     CDS             complement(79..771)
                     /locus_tag="WHG62_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ1724795.1"
                     /translation="MFHAFILRIYTMIKNISKLINHAVLIGFIPNIVFAYPIFAENPA
                     SYQNIHVRSWKARRDSGIVKQDLDFSCGAASIATLLNNFYGRHYSEAEILDKMDKTQM
                     RASFDDMQRIMPELGFEAQGYALPFEQLVQLKIPVIVYLKYRKNNHFSVLNGINGETV
                     LLADPSLGHVSMSKSQFLSAWKTRDGEMEGKILAIVPKNTDFVRNQMFFNKNPVRQTR
                     FTVEQIQMRQKR"
     gene            complement(1077..1634)
                     /locus_tag="WHG62_000638"
     CDS             complement(1077..1634)
                     /locus_tag="WHG62_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724796.1"
                     /translation="MMQKHKCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSI
                     SYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQ
                     AEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVA
                     AKQGWLLLPEADWLEIWHGDRVFMH"
     gene            complement(1879..2037)
                     /locus_tag="WHG62_000639"
     CDS             complement(1879..2037)
                     /locus_tag="WHG62_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724797.1"
                     /translation="MKPPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2034..2876)
                     /locus_tag="WHG62_000640"
     CDS             complement(2034..2876)
                     /locus_tag="WHG62_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ1724798.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3114..4034
                     /gene="pyrB"
                     /locus_tag="WHG62_000641"
     CDS             3114..4034
                     /gene="pyrB"
                     /locus_tag="WHG62_000641"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ1724799.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLAHAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4044..4502
                     /locus_tag="WHG62_000642"
     CDS             4044..4502
                     /locus_tag="WHG62_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ1724800.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4567..5232
                     /locus_tag="WHG62_000643"
     CDS             4567..5232
                     /locus_tag="WHG62_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724801.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5295..6512)
                     /locus_tag="WHG62_000644"
     CDS             complement(5295..6512)
                     /locus_tag="WHG62_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ1724802.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWSRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAGE
                     RLKDNEYYTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            6654..7199
                     /gene="def"
                     /locus_tag="WHG62_000645"
     CDS             6654..7199
                     /gene="def"
                     /locus_tag="WHG62_000645"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ1724803.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            7286..8212
                     /locus_tag="WHG62_000646"
     CDS             7286..8212
                     /locus_tag="WHG62_000646"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ1724804.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8291..9550
                     /gene="rsmB"
                     /locus_tag="WHG62_000647"
     CDS             8291..9550
                     /gene="rsmB"
                     /locus_tag="WHG62_000647"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ1724805.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLAAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            9516..10115
                     /locus_tag="WHG62_000648"
     CDS             9516..10115
                     /locus_tag="WHG62_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ1724806.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPNQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10115..12235
                     /locus_tag="WHG62_000649"
     CDS             10115..12235
                     /locus_tag="WHG62_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ1724807.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAE
                     QILGLPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVKTYA"
     gene            12228..13505
                     /locus_tag="WHG62_000650"
     CDS             12228..13505
                     /locus_tag="WHG62_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ1724808.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QVRPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKHGAAKIETGPVFDKLGNSAAIQEMNREVGAAVKRASPVL
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPTELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPAAFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAGAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13596..14783
                     /gene="dprA"
                     /locus_tag="WHG62_000651"
     CDS             13596..14783
                     /gene="dprA"
                     /locus_tag="WHG62_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ1724809.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGSRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            14809..15270
                     /locus_tag="WHG62_000652"
     CDS             14809..15270
                     /locus_tag="WHG62_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ1724810.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15342..17648
                     /gene="topA"
                     /locus_tag="WHG62_000653"
     CDS             15342..17648
                     /gene="topA"
                     /locus_tag="WHG62_000653"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ1724811.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNSKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLSNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCTNYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAESCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17721..18416)
                     /locus_tag="WHG62_000654"
     CDS             complement(17721..18416)
                     /locus_tag="WHG62_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724812.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFAPEMN
                     RILSDFKTTRGFK"
     gene            complement(18436..18987)
                     /locus_tag="WHG62_000655"
     CDS             complement(18436..18987)
                     /locus_tag="WHG62_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724813.1"
                     /translation="MEFLSLHPWWSFFIILTIILSYIGFCAHLHIQNRAVFFYSYRDV
                     TIIFLTPVILIALSYLIKNKEILSACILCITLIAFSWAWIITYRSNTKRFFLSLLIVW
                     GKLLLSTIVWAILAISLGLAVITGNSKRKKYERRDRHAERNEKAFIGALLVGFELSRN
                     LLNLCCLHKDFSTPSKNIEVNRS"
     gene            19106..19486
                     /locus_tag="WHG62_000656"
     CDS             19106..19486
                     /locus_tag="WHG62_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1724814.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVLQINDVDTNSGEFAIYTAQDASVKLDLLKMEL
                     KHCKEMLEHKDKEIELLRKLTETV"
     gene            19575..20144
                     /gene="rsmD"
                     /locus_tag="WHG62_000657"
     CDS             19575..20144
                     /gene="rsmD"
                     /locus_tag="WHG62_000657"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ1724815.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRSFVYLEAGTL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20267..20518
                     /locus_tag="WHG62_000658"
     CDS             20267..20518
                     /locus_tag="WHG62_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ1724816.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            20616..20699
                     /locus_tag="WHG62_000659"
     tRNA            20616..20699
                     /locus_tag="WHG62_000659"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20650..20652,aa:Tyr,seq:gta)
     gene            20730..20803
                     /locus_tag="WHG62_000660"
     tRNA            20730..20803
                     /locus_tag="WHG62_000660"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20762..20764,aa:Gly,seq:tcc)
     gene            20813..20887
                     /locus_tag="WHG62_000661"
     tRNA            20813..20887
                     /locus_tag="WHG62_000661"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20845..20847,aa:Thr,seq:ggt)
     gene            20936..>21516
                     /locus_tag="WHG62_000662"
     CDS             20936..>21516
                     /locus_tag="WHG62_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ1724817.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAA
                     KAYDQIDNAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSS
                     YDFPGDDCPIVQGSALKALEGDAAYEEKIFELAA"
BASE COUNT         5412 a         5477 c         5832 g         4795 t
ORIGIN      
        1 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat ataaaataaa
       61 tgggcaaaaa tcggtttatt atcgtttttg ccgcatttgg atttgttcta ccgtaaaacg
      121 tgtttgacga acgggattct tattaaaaaa catctgattt ctaacaaaat cagtattttt
      181 tggcacgatg gctaaaattt ttccttccat ttcgccatca cgtgttttcc atgcgctcaa
      241 gaattgtgat ttgctcattg agacgtgccc cagcgatgga tcagccagca aaacagtttc
      301 tccgttaata ccgttcaata ccgaaaaatg gttgttttta cggtatttta aatacacaat
      361 tacaggaatt tttagttgta ccaactgttc aaatggcaaa gcataacctt gtgcttcaaa
      421 acccagttcg ggcattatgc gttgcatatc atcaaaagaa gcacgcattt gggttttatc
      481 cattttgtcc aagatttccg cttcagaata atgtctgcca taaaaattat tcagtaacgt
      541 ggcaatcgaa gccgcgccgc aagaaaaatc caaatcttgt tttactatgc cggaatctcg
      601 ccgtgctttc caactccgta catggatgtt ttggtaagaa gcggggtttt cagcaaatat
      661 agggtaagca aaaacaatat ttgggataaa gccaattaaa accgcatggt ttattaattt
      721 agaaatattt tttatcatag tatatatgcg tagaataaac gcatgaaaca taaaaaaata
      781 aaatcatatg caattttatt gcatgaataa atatgaataa aatagataat gatgggagta
      841 aatacgccat gtattttgga agtttaaatt tattaataat aaaataattt atcgtagcgc
      901 aaataaatcc caaaattgga acgattagaa aaaaaattaa tacacccatc atcatgcaaa
      961 ctctatatta ataaatagct aactaattct attgtggaaa ttagttagct aactaaaagt
     1021 tattaatgat tatttccgag aattgactgc attgttggca gcattggccc caaaacctag
     1081 tgcatgaata cccggtctcc atgccaaatt tccagccaat ccgcctccgg cagcagcagc
     1141 cagccctgtt ttgccgctac tcctgttgcc gcaccgattc ctgccgcagt agccgcgcct
     1201 tgcgcagttc ctaatttacc atgattatac aaattagcac catgatactc ccatgcacct
     1261 aatgcaccgc caaaagcagc ggctgcaata atgggaacaa attcaccttg tgtttctttc
     1321 atttcagcct gtgataattg aattgctttc acattttggc tgtcaaaaac ttggctgtct
     1381 aaattttgcg ccattacagg tgtaatcatc atagccatta cagttgcaat tttcgttgcg
     1441 ctggtttgca cataaatagg attagcaaat tcgctttgat tgcgttcagt gttgatgtag
     1501 ctaatactgc tttctagttt gaatttaccc ttgtcagtca ataattcttc caaacttaaa
     1561 ggtaagtcag cataagcaat ttggctggca acagtcaaaa taaaatctat tagacatttg
     1621 tgtttttgca tcatttcgtt tgattttcta gtttttgaga atgatacaaa gtttttttac
     1681 aaagtaaaga gtcactctga aaaacatttt ttcattataa atcaaaatat tgatagaata
     1741 aatagcgagc atcgattcac ggtgtacttt agtgcaaagc gtacaacgcg agcctgaacc
     1801 accagccgca acaggaaaag aaagccgata gagtgcaatg cttgccaacg tgcaagcgag
     1861 cttgcaagaa cgcttggctc aacgagagca ggcaagacag aaagcagaaa gcaggatagg
     1921 agcggtaacg caaaggtctc gggctttgat ttcgccgtaa accctgctgc cgccttgtcc
     1981 ggaaagggtg caggcggcga gtgccgacag ggtgcagatg gggagggggg gtttcatttg
     2041 gggtcgcaac ggaagtggta tgcgcagatt tcaaaaccgt ttttgaaata caggcggtgc
     2101 gcgtcggcac ggtcgtggtt gacgtggacg ttgaggtgga ttttggttac ccctgtttcc
     2161 gcgccgattt tgcggacttc ttccaaaagg cgcgaggcgt agcctttgcg gcggctttgc
     2221 ggcagggtaa cgatgtcatc gatgtggatg tggcggccgc tggcgagggt gcaggcttcg
     2281 cggaagccgc agacggcgac ggcattgtgt ttgccttctt caaaaatacc cagcaggcgg
     2341 tagccttggg ggcgttggac tttgttgatc tgttcggtaa agcggttgat gtcggtcagg
     2401 gcggaacgca aaacgctcaa ggctgcaaag gcggtggcgg tgtcgtccgc gccgatttcg
     2461 cgcaaaacgt aggatgcgcc cgaggcggtc tgttcctgtg ctttctcggc ggcgtgtttt
     2521 tcttcgattg cctgtgccag catgacgtgt tcgtcggcag ggttgttttg tccgccctgt
     2581 tcgcgttctt cgagcagggc tttgcagtcg atgacgcgca ggtcgttgtc ggcggcaaag
     2641 tccatcagga agcggaacat ttgggggttg tcggtttcca gttttttatc gacggcgacg
     2701 cagcggatgt tgtccaccag catggggcgc acccatttcg aataggaaag cctgtggtct
     2761 ttggtgaacg aggacagaat gccgcacagg cgttccgccc agtcgctggg acggaaaatc
     2821 ttgccggaac tcgttgtgcc gtggatgacg acttcgtagg ggttgcagac taacatggcg
     2881 gcttcctgaa aagaaatgtc tggcgcgatt ataccttatg cttatgcggg cgtgtttgga
     2941 tatgccgtct gaaaagtacg ggattcgtgc ggtaaaactt tgcggcggca aatgtgcgat
     3001 aatacgcgcc gtattgccgc ttttgcgaag ctgttccgca aacatacggg cggcgtggac
     3061 gacgtataac cggatacccg cctgacgcgg gttttttacg gaagggggca aaaatgccta
     3121 atccgcttta cagacagcac atcatctcga tttcggattt gtcgcgcgaa cagttggaat
     3181 gcctgcttca gacggcattg aagctgaagg cgcatccgcg cggcgatttg ttggaaggca
     3241 aacttatcgg ttcgtgcttc tttgaaccgt ccacgcgcac gaggctgtcg tttgaaacgg
     3301 cggtgcagcg gctgggcggc aaggtcatcg gcttttcgga cggcgcgaat accagtgcca
     3361 aaaaaggcga gacgcttgcc gataccgccc gcatcatttc cggctacacc gacgcaatca
     3421 tccaacgcca ccccaaagac ggcgcggcgc gcgtggcagc ggagttttcg cgcgtccccg
     3481 tcatcaacgc cggcgacggc accaaccagc accccagcca gaccttgttg gatctggtaa
     3541 cgatttatga aacgcagggg cgtttggaca agctcaaaat cgccatggcg ggcgacttga
     3601 aatacgggcg caccgtgcat tcgctttgtc aggcgttgaa acgctggggc tgcgaatttg
     3661 cctttgtttc gccgcccagc ctcgcgatgc ccgactacat taccgaagag ttggacgaag
     3721 ccggctgccg ataccgtatc ctcggcagtt tggaagaggc ggcggaatgg gcggacatcc
     3781 tgtatatgac ccgcgtccag cgcgaacgtt tcgatgaaca ggaatttgcc aaaatccaag
     3841 gcaaattcaa cctcgaagcg tctatgctcg cccacgccaa accgaacctg cgcgtgctgc
     3901 accctttgcc gcgcgtggac gaaatccatc ccgatgtcga tgccacgccg catgcctatt
     3961 atttcgagca ggcaaccaac ggcgtttatg cgcgtatggc gatattgtcg ctggtgttga
     4021 acgaagaagt gtgaggaacc gatatggaaa ccccgaaact cagtgtcgaa gccattgaaa
     4081 aaggtacggt tatcgaccat attcccgccg gcagggggct gaccatcctg cgccagttca
     4141 aacttttgca ctacggcaac gcagtaaccg tgggcttcaa cctgcccagc aaaacccaag
     4201 gcagcaaaga catcatcaaa atcaaaggcg tgtgcttgga cgacaaagcc gccgaccgcc
     4261 ttgccctgtt tgcacccgaa gcagtggtca acaccatcga caatttcaag gttgtgcaga
     4321 aacggcattt gaacctgccc gacgaaatcg ccgaagtgtt ccgctgtccg aacacgaatt
     4381 gcgccggcca cggcgagccg gtcaaaagcc ggttttatgt taaaaaacac aacgggcaga
     4441 cgcggctgaa atgccattac tgcgaaaaaa cctacagccg ggattcggtg gcggaagcct
     4501 gacggattcc cttaaaccga gcgggcggca tttcgtctgc cgcttgtttt gccaatctga
     4561 aatggaatga tgatgcacgc ttctgtccaa agccgtttcg caccgatact ttatgttttg
     4621 attttctttg ccggtttttt gaccgcgcaa atctggttca atcagaaagc ctatactgaa
     4681 gagctgcctc cgcttctgtc cgcattgtcc gctgtcgcgc tggtgtggct ggcgtgggcg
     4741 ttcgtgtcgg cgcgttcaaa ggctaaggcg gaaaagttct accgcgaaaa aatgatacag
     4801 aacgaaagca tacaccccgt cctgcacgct tctttgcaac acttggaaca caagccgcaa
     4861 atgctcgccc tgctggtcaa aaaccacggc aaagggatgg cggaacaggt caggttcaag
     4921 gcggaagtgc tgcccgacga cgaagacgcg cgcacgattg ccgccgagtt ggcaaaaatg
     4981 gatatgtttg cattggggac ggacgcggtc gcctcgggcg aaacctatgg acgcgtgttc
     5041 gccgatattt tcgagttgtc ggcggctttg gaagggcgcg cgttcaaagg aatgttgaaa
     5101 ctgacggcgg aatataaaaa catcttcggc gatgcctgcc gttcggaaac ggcgttggag
     5161 ttgggcgcgc tcaatcaggc gttgcaggag atttcaaaaa catcggaaaa gtccaaacgg
     5221 atattttatt gaagatggaa aaatgccgtc tgaaacggaa ggtgtttcag acggcatttt
     5281 tgtcggatga ttaattattc ggagcggttg aagccaaact tcacgcggct gcggccctga
     5341 tccggtatat tgtccaaatc gcgtcccgga ttggcggcgg tgtcgcctac ggaaatatcg
     5401 gagatgtttt ccaaaatgat ggcggacgac aggtgttcgg aggtgcggta aaccattgcc
     5461 aagcccactt cttcggcagg agtggaaatc agctcgacgg tatccctgct tttgaaattg
     5521 ttggagaggt cgacctgcat cgttttcttg cgtttgtaga ggctcaaaac cgtgcctttg
     5581 tccaaaccgt ccgcctcgcc tttgtcgatg gtgatggttt gaaactggcc ggcaatcctt
     5641 gtgccttcaa acacggaaac gattttagcc tgaaccgggc gggacggttc gtgcggcatc
     5701 atgttgaagc ggtcggtgtc ttccggcatt ttcatcaggt agtcgccctg ctgtatttcg
     5761 gaaatggcgg tttcgaccac cagcggctgt atcgaagggg tgcgcagcgg ggtaatcaaa
     5821 ggatgggtgc gggtatagta ttcgttgtct ttcagccgtt ctccagcctg tttcgagcgt
     5881 tgttcgaggg cggagtcggt atagtcgagg gagcgcacga tgccgctgaa tgcgacttcc
     5941 tgcccgagga atttacccgt atccggatcg gtgatgtttt tattgattcg gtaggtcagg
     6001 tagcggcccg gctctttcag gcctttggtg taaaccctgg tgcctttggt gtacagcagc
     6061 ctgccttccg ggcccgagag caggcgcggc gcggcagcgg tttctttgcg ggaaacgatt
     6121 tgcggatgcc gcataaagat gcggtagaag ttgacatcga tggcgggaat accgtatccg
     6181 gacacttcct tatccggact cattttgacg acggggatgc cgtctgtctg ttccaagccg
     6241 aggcgcggtt cgccgtcaac gtggcgcaac accaatacct ggtccggata aatcaggtcg
     6301 ggattgtgga tttgatcccg gttcgcgtcc cacaggcggc tccattgcca cgggctgtac
     6361 aggtatttgc ccgaaatgcc ccacagggtg tcgccctgtt tgaccgtgta gcgttccggc
     6421 gcgttcgggc gcacctccaa atttgccgcc aaagtttgtg ttgagaatgc catacctgcc
     6481 gcgcagagca gggttataat acgacgttgc ataaccgttc cccttatctg ataaatttcg
     6541 gtttgtcttg cttgattggg ttggaaaaag cggcggcagc ccctcgggat gtgccgcgtg
     6601 ataaaaaatg ttccgcattt taacatcgaa ttatccgcac catcacggta attatgaaaa
     6661 acaggcggcg tatccgccga aggaaagaga aaattatggc tttattgaat atcttgcaat
     6721 atcccgacga gcgtctgcac acggtggcaa agcctgtcga acaagtcgac gagcgcatcc
     6781 ggaagctgat tgccgatatg tttgaaacga tgtacgaatc gcgcggcatc gggctggcgg
     6841 cgacgcaggt cgatgtgcac gagcgcgtgg tcgtgatgga tttgaccgaa gaccgcagcg
     6901 aaccgcgcgt gttcatcaac cccgtcatcg ttgaaaaaga cggcgaaacc acttacgaag
     6961 agggctgcct gtccgtgccg ggcatttacg acaccgtaac ccgcgccgaa cgcgtcaagg
     7021 tcgaggcttt gaacgaaaaa ggcgaaaagt tcacgctgga ggcggacggc ttgctggcga
     7081 tttgcgtgca gcacgagttg gaccacctga tgggcatcgt gtttgtcgaa cgcctgtcgc
     7141 agctcaagca gggacgcatc aaaaccaagc tgaaaaaacg tcagaaacat acgatttgac
     7201 ccttttgccg tgccgtctga acgctgcaaa gttttcagac ggcacggtct tgtccgacaa
     7261 ccttacgcat acgcaggaat atgctatgaa agtcatcttt gccggcacgc ccgattttgc
     7321 cgccgccgcc ttaaaagccg ttgccgccgc cggttttgaa atcccgctgg tgctgaccca
     7381 gcccgaccgt ccgaaagggc gcggtatgca actgaccgcc ccgcccgtca aacaagccgc
     7441 gctggaactc ggtttgcgcg tggcacagcc cgaaaaactg cgtaacaacg ccgaagccct
     7501 gcaaatgctc aaagaggtcg aggcagacgt aatggtggtt gccgcctacg gtttgattct
     7561 gccgcaggaa gtgttggata cgccgaaaca cggctgcctc aacatccacg cttcgctgtt
     7621 accccgttgg cgtggcgcgg cgccgattca acgcgcgatt gaagccggcg atgccgagac
     7681 aggcgtgtgt attatgcaga tggacatcgg tttggacacc ggcgatgtgg tcagcgaaca
     7741 ccgctacgcc atccaaccga ccgataccgc caacgaagtc cacgacgcgc tgatggaaat
     7801 cggtgcggcg gcggttgttg ccgatttgca acagcttcaa agcaaaggcc gtctgaacgc
     7861 ggtcaaacag cccgaagaag gtgttactta cgcccaaaaa ctaagcaaag aagaggcgcg
     7921 tatcgattgg agcgaaagcg cggcggttat cgaacgcaaa atccgcgcct tcaaccccgt
     7981 gcctgccgcg tgggttgagt atcagggcaa gccgatgaaa atccggcggg cggaagtggt
     8041 ggcgcaacaa ggcgcggcag gcgaagtgtt gtcctgttcg gcggacggtt tggtcgttgc
     8101 ctgcggcgaa aacgcgctga agattaccga attgcagcct gccggcggca ggcgtatgaa
     8161 tatcgcggcg tttgcagcag gacggcatat cgaagcaggg acgaagctgt aaatcccttc
     8221 agacggcatt ccgatccgca aatgggaatg ccgtctgaag tcatcagttg aagaaagcga
     8281 atcacataat atgagtatgg cacttgccca aaaacttgcc gccgacagca ttgcggcggt
     8341 tgccgaagga cgcaaccttc aggacgtgtt ggcgcaaatc cgcaccgcgc atcccgacct
     8401 tacggcgcag gaaaacggcg cgttgcagga catcgcctac ggttgccagc gttatttggg
     8461 cagtttgaaa catatgctcg cgcagatgct gaaaaaaccg attgacaatc cgcagctcga
     8521 aagcctgctt ttggcggcgt tgtaccaact gcattacacg cgcaacgcgc cgcacgccgt
     8581 ggtcaatgag gcggtggaaa gcatagccaa aatcgggcgc gggcagtacc gttcgtttgc
     8641 caacgcggtt ttgcgccgct ttttgcgcga acgcgacaag ctcgcggctt cctgtaaaaa
     8701 agacgatgtg gcgaaacaca acctgccgct gtggtgggtg gcttacctga aaaaccatta
     8761 tccgaaacac tggcacaaca tcgccgccgc gctgcaatcc catccgccga tgacgttgcg
     8821 cgtcaaccgc cggcacggca acgccgaaag ctatttggaa aaactggctg cggaaggcat
     8881 tgcggctaag gcgttggacg aatatgcggt tacgttggaa gaagccgtgc cggtaaaccg
     8941 cctgcccggt ttttcagacg gcatcgtttc ggtacaggac ttcggcgcgc agcaggcggc
     9001 gtatctcctt aacccgaaag acggcgaacg gattttggac gcgtgcgccg cgccgggcgg
     9061 caagacgggg catatcttgg aactggcgga ttgccgcgtt accgccttag acattgatgc
     9121 aggccgtctg aagcgtgtgg aggacaatat cgcccgtttg ggctttcaga cggcatcggc
     9181 ggcgtgtgcc gatgcgcggg atttggcggc gtggtatgat ggaaagcctt tcgacgcaat
     9241 ccttgccgac gtgccatgca ccgcttccgg cgtggcgcgg cgcaatcccg acgtgaaatg
     9301 gctgcgccgt ccgaccgacg cgctcaaaac cgcccgccag caggaagccc tgctggacgc
     9361 actttggcag acgctgaaac agggcggcag aatgctgctt gccacctgtt ccgtgttcgt
     9421 cgaagaaaac gacgggcaat tgcaaaaatt cctcaaccgc catgccgatg ccgaaccgat
     9481 cgaatcgcgg gtgcttttac cgaacaaaca ccaagatggc ttttattacg cgcttattca
     9541 aaagcattaa acaatggctt gtgctgctgc cgatgctttc cgttttgccg gacgcggcgg
     9601 cggaggggat agatgtgagc cgcgccgaag cgaggataac cgacggcggg cagctttcca
     9661 tcagcagccg cttccaaacc gagctgccca accagctcca acaggcgttg cgccggggcg
     9721 tgccgctcaa ctttacctta agctggcagc tttccgcccc gataatcgct tcttatcggt
     9781 ttaaattggg gcaactgatt ggcgatgacg acaatattga ctacaaactg agtttccatc
     9841 cgctgaccaa ccgctaccgc gttaccgtcg gcgcgttttc gacagactac gacaccttgg
     9901 atgcggcatt gcgcgcgacc ggcgcggttg ccaactggaa agtcctgaac aaaggcgcgc
     9961 tgtctggtgc ggaagcaggg gaaaccaagg cggaaatccg cctgacgctg tccacttcaa
    10021 aactgcccaa gccttttcaa atcaatgcat tgacttctca aaactggcat ttggattcgg
    10081 gttggaaacc tctaaacatc atcgggaaca aataatgcgc cgttttctac cgatcgcagc
    10141 catatgcgcc gtcgtcctgt tgtacggact gacggcggca accggcagca ccagttcgct
    10201 ggcggattat ttctggtgga tagttgcgtt cagcgcaatg ctgctgctgg tgttgtccgc
    10261 cgttttggca cgttatgtca tattgctgtt gaaagacagg cgcgacggcg tattcggttc
    10321 gcagattgcc aaacgccttt ctgggatgtt tacgctggtt gccgtactgc ccggcgtgtt
    10381 tctgttcggc gtttccgcac agtttatcaa cggcacgatt aattcgtggt tcggcaacga
    10441 tacccacgag gcgcttgaac gcagcctcaa tttgagcaag tccgcattga atctggcggc
    10501 agacaacgcc cttggcaacg ccatccccgt gcagatagac ctcatcggcg cggcttccct
    10561 gcccggggat atgggcaggg tgctggaaca ttacgccggc agcggttttg cccagcttgc
    10621 cctgtacaat gccgcaagcg gcaaaatcga aaaaagcatc aacccgcaca agctcgatca
    10681 gccgtttcca ggtaaggcgc gttgggaaaa aatccaacgg gcgggttcgg tcagggattt
    10741 ggaaagcata ggcggcgtat tgtacgcgca gggctggctg tcggcgggta cgcacaacgg
    10801 gcgcgattac gccttgtttt tccgtcagcc ggttcccaaa ggcgtggcag aggatgccgt
    10861 cttaatcgaa aaggcaaggg cgaaatatgc tgagttgagt tacagcaaaa aaggtttgca
    10921 gacctttttc ctggcaaccc tgctgattgc ctcgctgctg tcgatttttc ttgcactggt
    10981 catggcactg tatttcgccc gccgtttcgt cgaacccgtc ctatcgcttg ccgagggggc
    11041 gaaggcggtg gcgcaaggcg atttcagcca gacgcgcccc gtgttgcgca acgacgagtt
    11101 cggacgcttg accaagttgt tcaaccacat gaccgagcag ctttccatcg ccaaagaagc
    11161 agacgagcgc aaccgccggc gcgaggaagc cgccagacat tatcttgaat gcgtgttgga
    11221 ggggctgacc acgggcgtgg tggtgtttga cgaacaaggc tgtctgaaaa ccttcaacaa
    11281 agcggcggaa cagattttgg ggttgccgct tacccccctg tggggcagca gccggcacgg
    11341 ttggcacggc gtttcggcgc agcagtccct gcttgccgaa gtgtttgccg ccatcggcgc
    11401 ggcggcaggt acggacaaac cggtccatgt gaaatatgcc gcgccggacg atgccaaaat
    11461 cctgctgggc aaggcaaccg tcctgcccga agacaacggc aacggcgtgg taatggtgat
    11521 tgacgacatc accgttttga tacacgcgca aaaagaagcc gcgtggggcg aagtggccaa
    11581 acggctggca cacgaaatcc gcaatccgct cacgcccatc cagctttccg ccgaacggct
    11641 ggcgtggaaa ttgggcggga agctggacga gcaggacgcg caaatcctga cgcgttcgac
    11701 cgacaccatc gtcaaacagg tggcggcatt gaaggaaatg gtcgaagcat tccgcaatta
    11761 tgcgcgttcc ccttcgctca aattggaaaa tcaggatttg aacgccttaa tcggcgatgt
    11821 gttggcattg tatgaagccg gtccgtgccg gtttgcggcg gagcttgccg gcgaaccgct
    11881 gatggtggcg gcggatacga ccgccatgcg gcaggtgctg cacaatattt tcaaaaatgc
    11941 cgccgaagcg gcggaagaag ccgatgtacc cgaagtcagg gtaaaatcgg aagcggggca
    12001 ggacggtcgg attgtcctga cggtttgcga caacggcaaa gggttcggca gggaaatgct
    12061 gcacaacgcc ttcgagccgt atgtaacgga caaaccggcg ggaacgggat tgggtctgcc
    12121 tgtggtgaaa aaaatcattg aagaacacgg tggccgcatc agcctgagca atcaggatgc
    12181 gggtggggcg tgtgtcagaa tcatcttgcc aaaaacggta aaaacttatg cgtagcagcg
    12241 atattttaat tgtagacgac gaaatcggca tccgcgacct gctgtcggaa atcctgcagg
    12301 acgaaggtta ttcggtcgca ttggcggaaa acgccgaaga ggcgcgcaag ctgcgccatc
    12361 aggtacgccc ggcgatggtg ttgctggata tttggatgcc cgattgcgac ggcatcaccc
    12421 ttttgaagga gtgggcgaaa aacgggcagc tcaatatgcc ggtggtgatg atgagcgggc
    12481 atgccagcat cgataccgcc gtagaagcga ccaaaatcgg cgcgctcgac tttttggaaa
    12541 aaccgatttc cctgcaaaag ctgctgtctg ccgtcgaaaa cgcgttgaaa cacggtgcgg
    12601 cgaaaatcga aacgggaccg gtgttcgaca agctgggcaa cagtgcggcg attcaggaaa
    12661 tgaaccgtga ggtaggggct gcggtgaaac gtgcctctcc cgtacttttg acgggcgagg
    12721 caggttcgcc gtttgaaacg gtggcacgct atttccataa aaacggtacg ccgtgggtca
    12781 gcccggcaag ggtcgaatat ctgattgata tgccgacgga actgttgcag aaggctgaag
    12841 gtggtgtttt atatgtgggc gatattgccc agtacagccg caacatccaa gccggcattg
    12901 cctttattgt cggcaaggcg gaacaccgcc gcgtcagggt ggtcgcatcg ggcagcaggg
    12961 cggcaggttc agacggcatt gcctgcgagg aaaagctggc ggaactgctg tcggagtcgg
    13021 tcgtccgcat tccgccgctg cgtatgcagc atgaagatat tcccttcctg atacagggga
    13081 ttgcctgcaa tgtggcggaa agtcaaaaga ttgcgcccgc cgcattcagt gaagaggcac
    13141 ttgccgcatt gacccgttac gactggccgg gaaatttcga ccaactgcaa agcgtcgttg
    13201 caacgctgtt gttggaggcg gacggacagg aaatcggcgc aggggcggtt tcttcccttt
    13261 tggggcagaa tgtgcctgcc gagggagcgg aagatatggt gggcgggttt aatttcaacc
    13321 tgcccctgcg cgaattgagg gaggaggtgg agcggcgtta tttcgagtac cacatcgccc
    13381 aagaaggtca gaatatgagc aaagtggcgc agaaagtcgg tttggaacgc acgcaccttt
    13441 accgcaaact caaacagctc ggcatcggcg tttcgcgccg ggcgggggaa aaaaccgaag
    13501 aataggcccg gacggccggt tttccggctg cgggcttttg ttttcagacg gcatttggtg
    13561 caaatgccgt ctgaaatcgt aaggggacgg attttatgac agaggacgaa cgtttcgcgt
    13621 ggctgcaatt ggcgtttacg ccctatatcg gcgcggaaag cttcctgctg ctgctgcgcc
    13681 gtttcggcag cgcgtcaaac gccctgtccg caccggcgga acaggtcgcc ccggcggtgc
    13741 ggcacaagca ggcggccgag gcttggcgca atgcggaaaa acgcgctttg gcgcggcagg
    13801 cggcagaagc ggcgttggaa tgggaaatgc gggacggatg ccgcctgatg ctgcttcagg
    13861 atgaagattt ccccgaaatg ctgacgcagg ggctgaccgc gccgccggtt ttgtttttgc
    13921 gcggcaacgt gcggctgctg cacaagcctt ccgccgccat cgtcggcagc cgccatgcca
    13981 cgccgcaggc catgcggatt gccaaagatt tcggcaagtc gttgggcggg caaaatatcc
    14041 ccgttgtgtc gggtatggct tccggtatcg atactgccgc ccatcagggc gcactggagg
    14101 cagaaggcgg caccatcgcc gtgtggggga cgggtataga ccgcatttac ccgccgtcca
    14161 ataaaaacct tgcctatgaa atcgccgaaa aaggattgat tgtcagcgag tttcccatcg
    14221 gtacgcgccc gtatgccggc aactttccgc gccgcaaccg cctgattgcc gcgctgtcgc
    14281 aggttacgct ggtggttgaa gctgcgttgg aatctggttc gctgattacc gccggcttgg
    14341 cggcagaaat ggggcgcgaa gtgatggcgg tacccggttc gatagacaat ccgcacagca
    14401 aaggctgcca caaactgatt aaagacggcg cgaaattggt ggaatgcctg gacgacatcc
    14461 tgaacgaatg cccggggcta ttgcaaaata cgggtgcttc atcatattct ataaataagg
    14521 atacgcccga cacgggcagt cgcgccgttc agacggcata cgccccgccg cctgccgcaa
    14581 aaatgccgtc tgaaggggcg gcaggcggca cagccgtcgg cggcatactg gataaaatgg
    14641 gtttcgaccc catccatccc gacgtgcttg ccggacagtt ggctatgcct gccgcagatt
    14701 tgtatgccgc actgttggaa ttggaattgg acggcagcgt tgccgcaatg cccggcggca
    14761 gataccagcg tatccgaact tgaacgcact ttatattaag gaacacgaat gaccgaagtc
    14821 atcgcctacc tcatcgaaca tttccaagat ttcgatacct gtccgccgcc cgaagacttg
    14881 ggtatgctgc ttgaagaagc gggtttcgat acgatggaaa tcggcaacac cctgatgatg
    14941 atggaagtat tgctcaacag ctccgaattt tccgccgaac ctgccgacag cggcgcattg
    15001 cgcgtgtaca gcaaagaaga aaccgacaac ctgccgcagg aagtgatggg gctgatgcag
    15061 tatctgattg aagaaaaagc cgtcagctgc gaacagcggg aaatcatcat ccacgcgctc
    15121 atgcacattc cgggcgacga aattaccgta gataccgcca aagtgctgac cctgctgctt
    15181 ttatgggcaa acaagagcga gctgcccgtg ttggtcggcg acgagctgat gagcgcgctt
    15241 ttactcgaca acaaacccac gatgaactga agcggcttca gacggcccgc ccgaggccgt
    15301 ctgaaacgtc ggcatcaaaa ccaccatcca gagaacgaca aatggcgaaa aacctattaa
    15361 tcgtcgaatc cccgtccaaa gccaaaaccc tgaaaaaata tttgggcggc gattttgaaa
    15421 tccttgcatc ctacggacac gtccgcgacc tcgtccccaa aagcggcgcg gtcgatcccg
    15481 acaacggctt tgcgatgaaa taccaattga ttagccgcaa cagcaaacac gtcgatgcca
    15541 tcgttgccgg tgccaaagaa gctgaaaaca tctacctcgc caccgacccg gatagggaag
    15601 gcgaagccat ttcctggcat cttttggaaa tcctcaaatc caaacgcggc ttgaaaaaca
    15661 tcaagccgca gcgtgtcgtg ttccacgaaa tcaccaaaaa cgccgtgctc gatgccgttg
    15721 cccatccgcg cgaaatcgaa atggacttgg tcgatgcaca acaagcccgc cgtgctttgg
    15781 actatttggt cggctttaac ctttcgccat tgttatggaa aaaaatccgc cgaggtttga
    15841 gcgcggggcg tgtgcaaagc cctgctttgc gcctgatttg tgagcgcgaa aacgaaatcc
    15901 gcgcgtttga agcgcaggaa tattggacgg tgcatctcga cagccacaaa ggccgcagca
    15961 agttcaccgc caaactcgcc caatacaacg gcgcgaaact cgaacaattc gacctgtcga
    16021 acgaagccgc gcaagccgac gtattgaaag aactcgaagg caaagaagcc gtcgttaccg
    16081 ccattgaaaa gaaaaagcgc agccgcaatc ctgccgcgcc gttcaccact tctaccatgc
    16141 agcaggatgc cgtgcgcaaa ctcggcttca ccaccgaccg caccatgcgt accgcccaac
    16201 agctttatga aggtatagac gtagggcagg gcgcgatcgg tctgattacc tatatgcgta
    16261 ccgacagcgt gaatttggcg gatgaagcgt taaccgaaat ccgccattac attgaaaaca
    16321 aaatcggcaa agaatatctg ccgagtgccg ccaaacaata caaaaccaaa tccaaaaacg
    16381 cccaagaagc ccacgaagcc atccgtccga cttccgtgta ccgcacgccc gaaagcgtca
    16441 aacccttcct gagcgcagac cagttcaaac tctatcaaat gatttggcag cgtaccgtcg
    16501 cctgtcagat gacgcctgcc aaattcgacc aaaccaccgt cgatattacc gtcggcaaag
    16561 gcgtattccg cgtaaccgga caagtgcaaa ccttcgcagg cttcttgagc gtttatgaag
    16621 aaagcagcga cgatgaagaa ggcgaagaca gcaaaaaact gcccgaaatg agcgaaggcg
    16681 ataaattgcc cgtggacaaa ctctacggcg aacaacactt taccactccg ccgccgcgct
    16741 acaacgaagc cacgctggtt aaagccctcg aagaatacgg catcggccgc ccctcgacct
    16801 acgccagcat catctccacg ctcaaagacc gcgaatacgt tacccttgag caaaaacgct
    16861 tcatgcccac cgacacaggc gacatcgtca acaaattcct gaccgaacac ttcgcccaat
    16921 acgtcgatta ccacttcacc gccaaactcg aagaccagct tgacgaaatt gccgacggca
    16981 aacgccaatg gattcccttg atggacaaat tctggaaacc gttcatcaaa caagtggaag
    17041 aaaaagaagg catcgaacgc gccaaattta ccacgcagga acttgatgaa acctgcccga
    17101 aatgcggcga acacaaactg caaatcaaat tcggcaaaat gggtcgtttt gttgcgtgtg
    17161 ccggttatcc cgagtgcagc tacacgcgca acgtcaacga aactgccgaa gaagccgccg
    17221 agcgcatcgc caaagccgag gctgaacaag ccgaactcga cggacgcgaa tgtcctaaat
    17281 gtggtggtcg cctagtgtac aaatacagcc gaaccggcag caaattcatc ggctgcacca
    17341 actaccccaa atgcaaacac gtcgagccgc tggaaaaacc gaaagatacc ggcgtccagt
    17401 gtccgcaatg caaaaaaggc aacctcgtcg agcgcaaatc ccgctacggc aaactgtttt
    17461 acagttgcag cacctatccc gactgtaact acgccacatg gaacccaccc gttgcagaaa
    17521 gctgtccaaa atgcgcatgg ccggttttga ccatcaaaac caccaaacgc tggggtgtag
    17581 aaaaagtctg cccacaaaaa gaatgcggct ggaaagaaca gattgaaccg cccgcgccga
    17641 aggagtaaga ttaggttggt ttgaaagaga aaaggtcgtc tgaaaaattt tcagacgacc
    17701 tttgcttttc tgtgattggt ttatttgaat ccgcgtgttg ttttaaagtc cgataaaatc
    17761 cggttcattt caggcgcaaa caaggcgatg taatcgtaag atagaccgcg actggcactg
    17821 ggatggggaa agcagacgac ttcgcaatct tcaaacgatt ggaatttgac attgaaacgt
    17881 gtaccgtcaa attctttttg caccgtctcc agcggtttgg tctgcttacc gaccaactgc
    17941 tcgaagcgtg gcagtacatt ttggttgttc agaaaatccg ccaacctgct gcccatgaag
    18001 aggatgactt tcggacgcag tttttcgatg tggtagagaa aattatcgat gtgctcgggt
    18061 tgtgtgaact tgtctggatt gtcgatagtg ttgccctgtg tagcagccca gttggtttga
    18121 accagggatt tttcaaatgc accgcccaat ccattttcgt ctaaggggtg tccccacatt
    18181 tcaaaccaat tttttatcgt attatcgtaa cgccactttt ttgcctgctc tccgaaatag
    18241 agggatttgt ttgcaaatgt atggtcgatt ttgttttcag ggagtttgta ttcacctgct
    18301 acataagcag cctcatcggc tttactccaa ccccattcat agccacaaat cattaagcca
    18361 tgtttgtcgt tgtagccttt gaacaggctg ttgctcaaat tcaaatcctt catcatgaac
    18421 tcttcctttt aaaatttaag agcgattgac ttcaatgttt ttagatgggg tggaaaaatc
    18481 cttgtgtagg caacataaat tcaataaatt tcttgataat tcgaaaccta ctaatagcgc
    18541 acctataaaa gctttttcat tacgttcagc atgacggtca cgtcgttcat attttttacg
    18601 cttgctgttc cctgttatta cagctaagcc aagtgatatg gcgagaattg cccaaacaat
    18661 tgtacttaat aacaattttc cccatactat caataaggaa agaaaaaacc ttttagtatt
    18721 agatcgatag gttataatcc atgcccatga aaatgcaata agagttatac ataagataca
    18781 agctgacagg atttctttat ttttaattaa ataacttaga gcgatgagga tgacaggtgt
    18841 caagaaaata atagttacat cccgatagct ataaaagaaa actgccctat tttgaatgtg
    18901 gagatgtgca cagaatccaa tatagctaag gataatagtt aatataataa aaaaagacca
    18961 ccaagggtga agagatagga attccatgtt ttcccttttt ttgtaaaaag gaaaaaatct
    19021 tatctaatag ttaattgcct aaccagccag aagaagttta aaatctatcc caataattca
    19081 accatctata cagaaagttc agcttatgga aacccacgaa aaaatccgcc tgatgcgcga
    19141 attgaataaa tggtcccagg aggatatggc ggaaaagctg gcgatgtcgg caggcgggta
    19201 tgccaaaatc gaacgaggcg aaacgcagtt gaatatcccg cgtttggagc agttggcgca
    19261 gattttcaaa attgatatgt gggacttgct caaatcgggc ggcggcggga tggtgttgca
    19321 gattaacgat gtggatacca acagcgggga atttgcaatc tataccgctc aggatgcatc
    19381 ggtaaagctg gatttgttaa aaatggaatt aaaacactgt aaagaaatgt tggaacacaa
    19441 agacaaagaa atcgagctgc tccgcaagct gaccgaaacc gtttaaacag atatgccgtc
    19501 tgaaaaaagt tttcagacgg catattcttt gacaggtctt gtataatacc gtttgaactt
    19561 acaggttttt gattatggcg gcaggcaaac ataccaaaca cagtaaccgg gtacgcatta
    19621 tcggcgggca atgccggggc aggaaattaa gtttcacatc cgccgacgga ctgcgtccga
    19681 cacccgacag cgtgcgtgaa aagctgttta actggctggg acaggatttg acgggtaaaa
    19741 cggttttgga tctcttcgga ggcagcggcg cactcggtat agaagccgct tcgcgcaacg
    19801 ccaaacgcgt gctgatttcg gataacaacc gccaaaccgt gcagaccttg cagaaaaaca
    19861 gtcgcgaact gggtttgggg caggtgcaaa tcgtctgttc agacggcatc gcatatttga
    19921 agaccgtatc cgaacagttt gatgttgtct ttcttgaccc gccgtttgca tggcaggact
    19981 ggcaaatcct gtttgatgcc ttgaagccgt gcctgaaccc ccggtcattc gtctatctcg
    20041 aggcgggtac gctgccggat attcccgatt ggctgacgga atatagagag gggaaatcgg
    20101 ggcagagtac atttgaatta agggttttcc aagtggctga ataatatgcg ctttgataat
    20161 catttccgag ttgtaaacat tcgtttgcaa ccgtccggtt caaaaaaacc ttgtgctata
    20221 atccgcgccc gcccggtttt gataatttag tggaaaagga aaagaaatgt cgctttttat
    20281 taccgacgag tgcatcaact gcgacgtatg cgaacccgaa tgccccaatg atgccatctc
    20341 gcaaggcgag gaaatttacg aaatcaaccc caacctctgc acgcagtgcg tcggacacta
    20401 cgatgaaccg cagtgccagc aggtttgccc ggtggactgc atcctgattg acgaagaaca
    20461 tcccgaaacg catgacgagt tgatggcgaa atacgaaaag attatccagt ttaaataaat
    20521 tcttctttaa aacatcaaat tatgtctgtt ttgaaataaa atcaaaaaaa aacttgacgg
    20581 aaaagcaagc cgctaataaa ctaacgttct cttttggagg gattcccgag cggtcaaagg
    20641 gggcagactg taaatctgtt gcgaaagctt cgaaggttcg aatccttctc cctccaccaa
    20701 aattcttact tggggcagta gcgagtaatg cgggtgtagc tcaatggtag agcagaagcc
    20761 ttccaagctt acggtgaggg ttcgattccc ttcacccgct ccaaacaatt aggcccatgt
    20821 agctcagggg tagagcactc ccttggtaag ggagaggtcg gcagttcaaa tctgcccatg
    20881 ggcaccatcc ctcgattatt catttcttta aggcttagat atataggata ttgccatggc
    20941 taaggaaaaa ttcgaacgta gcaaaccgca cgtaaacgtt ggcaccatcg gtcacgttga
    21001 ccatggtaaa accaccctga ctgccgcttt gactactatt ttggctaaaa aattcggtgg
    21061 tgctgcaaaa gcttacgacc aaatcgacaa cgcacccgaa gaaaaagcac gcggtattac
    21121 cattaacacc tcgcacgtgg aatacgaaac cgaaacccgc cactacgcac acgtagactg
    21181 cccggggcac gccgactacg ttaaaaacat gattaccggt gccgcacaaa tggacggtgc
    21241 aatcttggta tgttccgcag ccgacggccc tatgccgcaa acccgcgaac acatcctgct
    21301 ggcccgccaa gtaggcgtac cttacatcat cgtgttcatg aacaaatgcg acatggtcga
    21361 cgatgccgag ctgttggaac tggttgaaat ggaaatccgc gacctgctgt ccagctacga
    21421 cttccccggc gacgactgcc cgatcgtaca aggttccgca ctgaaagcct tggaaggcga
    21481 tgccgcttac gaagagaaaa tcttcgaatt ggctgc
//
LOCUS       DAWGBY010000019        21468 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.019, whole genome shotgun sequence.
ACCESSION   DAWGBY010000019 DAWGBY010000000
VERSION     DAWGBY010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.019"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            46..204
                     /locus_tag="WHG62_000663"
     CDS             46..204
                     /locus_tag="WHG62_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724818.1"
                     /translation="MPSEHAFGRRFYNKNTSWRLVLCLSKFLCRAYLKISDGIGLCCL
                     KSVFRFSL"
     gene            286..1407
                     /gene="dnaJ"
                     /locus_tag="WHG62_000664"
     CDS             286..1407
                     /gene="dnaJ"
                     /locus_tag="WHG62_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ1724819.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1602..3620
                     /locus_tag="WHG62_000665"
     CDS             1602..3620
                     /locus_tag="WHG62_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ1724820.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSELPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(3664..4221)
                     /gene="rfbC"
                     /locus_tag="WHG62_000666"
     CDS             complement(3664..4221)
                     /gene="rfbC"
                     /locus_tag="WHG62_000666"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ1724821.1"
                     /translation="MNIIDTALPDVKILKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIDWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(4266..5132)
                     /gene="rfbA"
                     /locus_tag="WHG62_000667"
     CDS             complement(4266..5132)
                     /gene="rfbA"
                     /locus_tag="WHG62_000667"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ1724822.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLTKKDVETRAKPLEKT
                     AYGQYLLRLIGK"
     gene            complement(5195..6277)
                     /gene="rfbB"
                     /locus_tag="WHG62_000668"
     CDS             complement(5195..6277)
                     /gene="rfbB"
                     /locus_tag="WHG62_000668"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ1724823.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEF
                     IQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYA
                     PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGLYHFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE
                     ELAPEKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQ
                     WYLDNKTWWQNVLNGSYRLERLGTGK"
     gene            complement(6278..7321)
                     /gene="galE"
                     /locus_tag="WHG62_000669"
                     /pseudo
     CDS             complement(6278..7321)
                     /gene="galE"
                     /locus_tag="WHG62_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223275.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(7314..8315)
                     /gene="dcm"
                     /locus_tag="WHG62_000670"
     CDS             complement(7314..8315)
                     /gene="dcm"
                     /locus_tag="WHG62_000670"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ1724824.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(8346..10619)
                     /locus_tag="WHG62_000671"
     CDS             complement(8346..10619)
                     /locus_tag="WHG62_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ1724825.1"
                     /translation="MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(10683..11333)
                     /locus_tag="WHG62_000672"
     CDS             complement(10683..11333)
                     /locus_tag="WHG62_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ1724826.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP"
     gene            complement(11330..12127)
                     /locus_tag="WHG62_000673"
     CDS             complement(11330..12127)
                     /locus_tag="WHG62_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ1724827.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(12127..13290)
                     /gene="ctrB"
                     /locus_tag="WHG62_000674"
     CDS             complement(12127..13290)
                     /gene="ctrB"
                     /locus_tag="WHG62_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ1724828.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTATERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(13305..14480)
                     /gene="ctrA"
                     /locus_tag="WHG62_000675"
     CDS             complement(13305..14480)
                     /gene="ctrA"
                     /locus_tag="WHG62_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HEZ1724829.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            14615..15748
                     /gene="neuC"
                     /locus_tag="WHG62_000676"
     CDS             14615..15748
                     /gene="neuC"
                     /locus_tag="WHG62_000676"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEZ1724830.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTCKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            15752..16438
                     /gene="neuA"
                     /locus_tag="WHG62_000677"
     CDS             15752..16438
                     /gene="neuA"
                     /locus_tag="WHG62_000677"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HEZ1724831.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            16439..17488
                     /gene="siaC"
                     /locus_tag="WHG62_000678"
     CDS             16439..17488
                     /gene="siaC"
                     /locus_tag="WHG62_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HEZ1724832.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIS"
     gene            17640..20753
                     /locus_tag="WHG62_000679"
     CDS             17640..20753
                     /locus_tag="WHG62_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ1724833.1"
                     /translation="MAVIIFVNGIRAVNGLVKSSINTANAFAEEGLDVHLINFVGNIT
                     GAEHLYPPFHLHPNVKTSSIIDLFNDIPENVSCRNTPFYSIHQQFFKAEYSAHYKHVL
                     MKIESLLSEEDSIIFTHPLQLEMYRLANNNIKSKAKLIVQIHGNYMEEIHNYEILARN
                     IDYVDYLQTVSDEMLEEMHSHFKIKKDKLVFIPNITYPISLEKKEADFFIKDNEDIDN
                     AQKFKRISIVGSIQPRKNQLDAIKIINKIKNENYILQIYGKSINKDYFELIKKYIKDN
                     KLQNRILFKGESSEQEIYENTDILIMTSQSEGFGYIFLEGMVYDIPILAYNFKYGAND
                     FSNYNENASVFKTGDISGMAKKIIELLNNPEKYKELVQYNHNRFLKEYAKDVVMAKYF
                     TILPRSFNNVSLSSAFSRKELDEFQNITFSIEDSNDLAHIWNFELTNPAQNMNFFALV
                     GKRKFPMDAHIQGTQCTIKIAHKKTGNLLSLLLKKRNQLNLSRGYTLIAEDNSYEKYI
                     GAISNKGNFEIIANKKNSFSYLNKSTLELHEIPHELHQNKLLIALPNMQTPLKITDDN
                     LIPIQASIKLEKIGNTYYPCFLPSGIFNNICLDYGEESKIINFSKYSYKYIYDSIRHI
                     EQHTDISDIIVCNVYSWELIRASVIESLMEFTGKWEKHFQTSPKIDYRFDHEGKRSMD
                     DVFSEETFIMEFPRKNGIDKKTAAFQNIPNSIVMEYPQTNGYSMRSHSLKSNVVAAKH
                     FLEKLNKIKVDIKFKKHDLANIKKMNRIIYEHLGININIEAFLKPRLEKFKREEKYFH
                     DFFKRNNFKEVIFPSTYWNPGIICAAHKQGIKVSDIQYAAITPYHPAYFKLPKSHYVA
                     DKLFLWSEYWNHELLPNPTREIGSGAAYWYALDDVRFSEKLNYDYIFLSQSRISSRLL
                     SFAIEFALKNPQLQLLFSKHPDENIDLKNRIIPDNLIISTESSIQGINESRVAVGVYS
                     TSLFEALACGKQTFVVKYPGYEIMSNEIDSGLFFAVETPEEMLEKTSPNWVAVADIEN
                     QFFGQEK"
     gene            20834..>21468
                     /locus_tag="WHG62_000680"
     CDS             20834..>21468
                     /locus_tag="WHG62_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ1724834.1"
                     /translation="MYSEQGINNTINISTTSLTNATQLTVIGNNNSVYIGNNCKIVSS
                     NIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKD
                     CMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVV
                     GSHTVLYKSFKEPNCVIAGSPAKIVKENIVWGRKMYHSTMYDDPTLNEFYK"
BASE COUNT         5865 a         4825 c         4871 g         5907 t
ORIGIN      
        1 gaaaaagacc tgcgctatat cggggaatga atcgacgcaa aggaaatgcc gtctgaacat
       61 gcgttcgggc ggcgttttta taacaaaaac acttcatggc ggttggtttt atgcctgtct
      121 aagtttttgt gtcgtgcata cctgaagatt tcagacggca tcggtttatg ctgtctgaaa
      181 agtgtattcc gtttcagttt gtaagctatg gcagtctgtt tgtcttgtgt tttgcgtaat
      241 tgcccttatt ttaagccgtg attttatttt gaattagatg aaaaaatgag taatcaagat
      301 ttttatgcga cgctgggtgt ggcaagaaca gctaccgatg atgagattaa aaaagcctac
      361 cggaaattgg cgatgaaata tcatcccgac cgcaatcctg acaataaaga ggcggaagag
      421 aagtttaaag aagtacaaaa ggcgtatgaa actttgtccg acaaggaaaa gcgcgctatg
      481 tacgaccagt atggtcatgc ggcgtttgaa ggcggcggac aggggggctt cggagggttt
      541 ggcggatttg gcggtgcgca gggttttgac tttggggata ttttcagcca aatgtttgga
      601 ggcggttcgg ggcgcgccca gcctgattat cagggtgagg acgttcaagt cggtatcgaa
      661 atcacgcttg aagaagccgc aaaaggtgtg aagaaacgca tcaatattcc gacttatgaa
      721 gcgtgtgatg tctgtaacgg cagcggcgcg aaaccgggga catccccgga aacctgcccg
      781 acttgcaaag gttcgggtac ggtgcacatc cagcaggcga ttttccgtat gcagcagact
      841 tgtccgacct gccacggtgc gggcaagcac attaaagaac cttgcgtcaa atgccgtggc
      901 gcggggcgga ataaggcggt caagacggtg gaagtcaata ttcccgccgg tatcgatgac
      961 gggcagcgta tccgtttgag cggcgaaggc ggaccgggta tgcacggtgc gcctgccggc
     1021 gacctgtatg taaccgtccg cattcgggcg cataagattt tccaacgcga cggtctggac
     1081 ttgcattgcg aactgccgat cagttttgcc acggctgctt tgggcgggga gttggaagtg
     1141 ccgaccttgg acggaaaggt caagctcacc gtccccaaag aaacccaaac cggcaggagg
     1201 atgcgcgtga agggtaaggg tgtcaaatct ttacgcagca gcgcgaccgg cgatttgtac
     1261 tgccatattg ttgtcgaaac gcctgtcaat ttgaccgacc gtcaaaaaga gcttttggaa
     1321 gaatttgagc ggatttctac cggcttggaa aaccaaacac cgcgcaagaa atcgttttta
     1381 gacaagctgc gcgatttgtt tgattgattt taagttttgg aaacaagcag ccgtatcggg
     1441 gaatctccct gatacggctg ttttgtttgt ttaaaaatag tttttatttt caatggggta
     1501 tggggcaggg tgggataact gtttttaact gttcttttta aaacttgaca tcatggcgcg
     1561 atgccaacaa tatgtgaacg tctgttgtca aaggaaaaat aatgaataaa tctttatccg
     1621 ggtcggtaga agaataccgc gaactgacgc tccgaggcat gatactcggt gcattgatca
     1681 ctgtaatttt tactgcgtcc aacgtttacc tcggtttgaa agtcgggctg acctttgcct
     1741 cgtcgattcc ggcggcggta atttcgatgg cggttttaaa gtttttcaaa ggcagcaata
     1801 ttttggaaaa caacatggtg cagacccaag cctcggctgc gggtacgctt tcgaccatca
     1861 tcttcgtcct gcccggtttg ctgatggcgg gctactggag cggtttcccg ttctggcaga
     1921 cgacgctttt atgtattgcc ggcgggattt tgggggtgat ttttaccatt ccgctgcgtt
     1981 acgcgatggt ggtaaaaagt gagctgcctt acccggaagg tgtggcggct gctgaaattt
     2041 tgaaagtggg cggtcatgaa gaaggggata accgtcaggg aggcagcggc atcaaagagc
     2101 tggcggccgg cggtgcgttg gcgggattga tgagcttttg cgccggaggt ctgcgcgtga
     2161 ttgccgacag cgcgagttat tggtttaaaa gcggtacggc gattttccaa ctgccgatgg
     2221 gcttttcact ggcattgttg ggcgcgggct atttggtcgg actgacgggc ggtatcgcca
     2281 tcctgttggg catttcgatt gcttggggca ttgccgtgcc gtatttctcc tcacacattc
     2341 cgcaaccttc cgatatggaa atggcggcgt ttgcgatgaa gctgtggaag gagaaagtgc
     2401 gttttatcgg tgcggggact attggcattg cggcggtttg gacgctgttg atgctgctca
     2461 agccgatggt ggaaggcatg aagatgtcgt tcaagagttt tggcggcggt gcgcccgctg
     2521 cggaacgcgc cgaacaggat ttgtcgccta aagccatgat tttttgggtg ctggcgatga
     2581 tgtttgtttt aggcgtgtcg ttttaccact ttatcggcga ttcgcacatt acgggcggca
     2641 tggcttggct tttggtggtc gtttgcacgc ttttggcttc cgtcatcggc tttttggtcg
     2701 ccgccgcctg cggttatatg gcaggtttgg tcggctcgtc ttccagcccg atttccggcg
     2761 tgggcatcgt gtccgtcgtc gttatttcac tggttttgct gctggtaggt gaatccggag
     2821 gtttgttggc ggatgaggct aaccgcaaat ttttgctggc actgactttg ttttgcggct
     2881 cggcagtaat ctgcgtggct tcgatttcca atgacaacct gcaagacttg aaaaccggct
     2941 acctgctcaa agccacgcct tggcggcagc aagtcgccct gattatcggc tgtatcgttg
     3001 gtgcgctggt tatttcgccc gtgttggaac tgctttacga agcctacggc tttaccggcg
     3061 caatgccgcg cgaaggcatg gatgcggcgc aggctttggc ggctcctcaa gcgactttga
     3121 tgacgaccat cgcgtcgggc attttcgccc acaacctcga atgggtctac atctttaccg
     3181 gcatcgcgat tggagcggta ttaatcgtcg tcgatttggt gttgaaaaaa tcatcaggcg
     3241 gcaaacttgc cctgcccgtc cttgcggtcg gtatgggtat ttatctgccg ccgtccgtca
     3301 atatgcccat cgtggcaggc gcggtgttgg cggcggtgtt gaaacacatc atcggtaaaa
     3361 aagcggaaaa ccgcgaaggc cgtctgaaaa acgccgagcg catcggaacc ttgttctccg
     3421 ccggcctgat tgtcggtgaa agcctgatcg gtgtgattat ggcgtttatt attgccttct
     3481 ccgtgaccaa cggcggctcg gatgcgccgc tcgcgttgaa tctgcaaaac tgggatgccg
     3541 ccgcttcttg gttgggtttg gcgttcttcg ttaccgggat gtttttcttt gcacagcgcg
     3601 tactgaaggc gggtaggtag cctgtcggaa aaaatgccgt ctgaaacgtt cagacggcat
     3661 tttttatcgg gaaagcgtaa ggcggagctt ttcggcttgt gcccacgtct tgccggcaag
     3721 gtctttgggc gaaagcagcg gcgcggtttg aagcggccag tcgatgccga ctgtcgggtc
     3781 gttccatatt aaaacctgtt cggcttcagg cttgtaatag tccgtgcatt tgtacacgac
     3841 ttccgctgcg tcgcccaaaa cgcaaaaccc gtgcgcgaag ccttcgggta tccaaagctg
     3901 gcattggttt tgcgcggaca gggttgcgcc cgcccatttg ccgaaagtcg gcgaaccttc
     3961 gcgcatatcg acggccacgt cgaacacttc gccgacaact acgcgtacga gtttgccttg
     4021 tgtgttttcg gtttggtagt gcaggccgcg caatacgcct ttgccggatt tggagtggtt
     4081 ttcctgcaca aaggttcggt cggcaatatt ttctttgaac cacccgtcgc ggaaggtttc
     4141 cataaaaaag ccgcgcccgt ctgtgaagac ttgcggtttt aaaattttta cgtcggggag
     4201 ggcggtgtcg atgatgttca tgattttctc tgtatgccgt ctgaagaaag tggttcagac
     4261 ggcatttatt tgccgattag gcgcagcagg tattgcccgt aggcggtttt ttccaaaggc
     4321 tttgcccgtg tttccacatc ttttttcgtc agccagccgt tgcgccaggc gatttcttcc
     4381 aaacaggcga tgtgcaggtt ttggatgttt tgcacggttt ggacgaatga agccgcttcg
     4441 tgcaggcttt cgtgcgtgcc ggtgtccagc cacgcgaaac cgcgtcctaa tatttggacg
     4501 gataatgaac cgtcttccaa atacatttgg ttgaggtcgg aaatttccaa ttcgccgcgt
     4561 gcggacggtt tgagctgttt ggcgaactcg acggcgcggt tgtcgtagaa atacaagccg
     4621 gttaccgccc aatcggattt gggccgttgc ggtttttctt cgatggaaac ggcgcggaag
     4681 ttttcgttaa attcaaccac gccgaaacgt tcggggtttt tgacctgata agcaaacacg
     4741 gttgcgccgt gcgtttgcgc tgccgcctgt ttcaatgttt gcgtaaacga ctgaccgtaa
     4801 aaaatattgt cgcccaaaac caagcaaaca ttgtcgttgc cgataaattc ttcgccgatg
     4861 ataaatgcct gtgccaagcc gtccggactg ggttgcacgg cataactgat ggaaatgccg
     4921 aaatcgctgc cgtcgccaag caggcgtttg aaagaggcgt tgtcttcagg cgcggtaatc
     4981 accaaaatat cgcggattcc cgccagcatc aaaaccgaca aggggtaata aatcatcggt
     5041 ttgtcgtaca cgggcaggag ctgtttggat acgccgcgcg tgatggggta gaggcgcgtg
     5101 ccgctgccgc ctgccagtat gatgcctttc atcttttctt tcttcctttg cgatgggttt
     5161 tcagacggca ttgcgtcggg atgccgtctg aaaactattt tccagtacct aaacgttcca
     5221 aacgatagct gccgttcaat acattttgcc accaggtttt gttgtccaga taccattgca
     5281 cggttttgcg gaggccggac tcgaaggttt ccaaaggcag ccagcccaaa tcccgcctga
     5341 ttttggctgc gtcgacggcg tagcgtacgt catggccggg gcggtcttgt acgaaagtaa
     5401 tcaaatcttc ataacgcgcc acaccggccg gtttttcggg agcgagttct tccagcaggg
     5461 cgcagatggt tttgacgact tcaatattgg ctttttcatt gtggccgccg atattgtagg
     5521 tttcgccgac aacaccttcg gtaacaacct gatacagtgc gcgcgcgtgg tcttcgacaa
     5581 acagccagtc gcggatttgc ataccgtcgc cgtacacagg cagcggtttg ccgtcaagcg
     5641 cgttcagaat catcaaagga atgagttttt ccggaaaatg gtaaagaccg tagttgttgg
     5701 agcagttggt tacaatggtc ggcaagccgt aagtacgcaa ccacgcgcgg acgaggtggt
     5761 cgctggacgc tttagaggca gagtaggggc tggacggcgc gtagggcgcg gtttcggtaa
     5821 acaaatcgtc cgtgccgcct aaatcgccat agacttcatc ggtggaaata tggtggaaac
     5881 ggaaggcttc gtgctgttca gacggcattt gttgccagta ggcgcgggct gcttcaagca
     5941 gattgaatgt gccgacgata ttggtttgga taaactcgcc tgccgaaccg atagagcggt
     6001 cgacatggct ttccgccgcc aagtgcatca cggcatcggg ccggtgttgt gcgaatacgc
     6061 ggtcgagttc ggcgcggtcg caaatgtcca cttgctcgaa agcatagcgg ggattatcgg
     6121 caatgtcggt cagcgattcg agattgcccg cgtaggtcag tttgtcgagg ttgacgacgg
     6181 aatcttgggt gttttgaatg atatggcgga caacggcaga gccgataaag cccgcgccgc
     6241 cggtaacgag gatggttttt ttgtttgcgg tttgcattta atccccatat ccgttggggt
     6301 tgcggctgac ccaacgccac gaatcctcca tcatttgcgc aaggctgcgt ttggtttccc
     6361 aacctgtctc ttgtttggta tgggacgggt cggcaaagga acacgccaag tctccggcgc
     6421 gtcggggttg gatttgatag ggaatattta agccggatgc ggcttcaaag gcacggatga
     6481 tttccaacac cgaagaagcg cggccggagc ctaagttcag caaatgcgtg cctgctacat
     6541 tactttttgc cttcattgcc gcgatatgcc cttctgccaa atccatcaca tgaatatagt
     6601 cgcgcatacc cgtaccgtct ggggtagggt agtcatcgcc aaataccgcc aattgcggca
     6661 gtttgcctgc cgccacttgg cagatataag gcaacaaatt attcgggatg ccgtttggct
     6721 gctcgccaat caaaccactt tcgtgcgcgc caatcggatt gaaatagcgc aacaaaatca
     6781 cgctccagcg cggatcggct ttttgaatat cagtgagaat gcgctcaacc attgatttcg
     6841 atgcgccata aggattagcg gtatcgcccg ggcgcatatc ttccgtatag ggcattttac
     6901 gtatcatggc gcgacgcatt aaagtaaacg ccaaagcgcg tttatactgg ttatccagtt
     6961 tccctatatt tttacgttac aaatcaagtt gttggtattc atcgtgaaaa tagaattttt
     7021 cggcataacg ctgactcata aaaccggcat gcgggctgcc tgaaaaaatc attgcgacat
     7081 catcgtcatt taatgtttca tggttgtttt ctattaatgc taaagcaatt tggtaattaa
     7141 ttgccaaaat atcgttagta atcacacgat agccgcgttt tttggcttcg taggcaaagg
     7201 aacagcctcc actaaataca tctgcaactg tatctacatc agacggaagc tggtcacaaa
     7261 tccaggaagc tattttctct ttattaccga tatagttaat tttcggatat tgcttattca
     7321 ttttcactca tttttaaaat actttcagca atagcttttg ccaataaagg cggtacggcg
     7381 ttaccaacct gctgctgctg ggcaattttg ctgccgcaaa aaataaaatt atcagggaaa
     7441 gattgtaagg cagctaattc acgaacggtt aaagcccgat tctgttcata gtgaaaaact
     7501 ttgcgcatat ctcctgtaat acaaacggct ggtttgttgc tgttgtaacg gatgtattta
     7561 cggatatcac ctgttttcgg acgtaatggt tcaggaatat cgttacggtt acctccattt
     7621 ttaacaaatg ccattttttc taacatttgt gccgaatgat tcatagcttc atgatttgca
     7681 acgtgtggat tgctttcgcc agcagccagt tttggaaaat gtcctattgc tgatccaaca
     7741 gtctgatggg aaatctgcaa aggttcggga aaggaaattt tgcctttatc cctcctcccg
     7801 ataaatatca ctcggctacg tatctgagga acaccgaaat cggctgcact cagtatctta
     7861 cattccaccg aataaccgat attctgaaat gcttgaataa tctcaatacg tgttttacct
     7921 gaattgtgtg tatagagtcg cgctacattt tccataacaa aaaaatatgg ttggacaatt
     7981 ttaactattc ggacaaactc tttaaataaa tggttgcgtg ggtcatctgt aaatgtccgt
     8041 ccaatctttc ctgccatact aaaaccttga caaggtggtc ctccaataat caaatcaact
     8101 gcttgtccgt taagacaatt gattaaatct tgttcggtta gtgtggttaa atctttttgc
     8161 agtaattgat gatgggggaa gttggtacgg taagtctgac aataatcaga ctccatttca
     8221 acagaaagca attgttggaa tccggcttgt tcaaaaccca aggataggcc tcctgctcct
     8281 gagaaaaggt caatataggt aagtggtgtg tgcataagtc aaaatccata aactcttcga
     8341 ttattttacc gcttcagctt cgcaaacgca tccgccatcg ccgaattggc tggggcgcgg
     8401 tcgttgcgtt ggggtttgcg gccggctgtc cgttcgcggc tgcggttttc agacggcatt
     8461 ttatgttttg cgccgcccgg ttcgtcatcc aagcgcatgg tcagcgcgat gcgtttgcgt
     8521 gcagcatcga cttccagcac tttcactttc accacgtcgc cagctttcac cacttcgcgc
     8581 gggtcttgga cgaacttgtt ggacagggcg gagatgtgca ccaagccgtc ctgatggacg
     8641 ccgatgtcca cgaacgcgcc gaagttggcg acgttggaaa ccacgccttc gagtatcata
     8701 ccgacttgca agtcgctgat ttcgtggata ccttcggcaa acgatgccgt ctgaaactcg
     8761 ccgcgcggat cacggccggg tttttccagt tcggacagga tgtccaaaat ggtcggcagg
     8821 ccgaagcgtt cgtcggtgaa gtcggacgct ttgatttgct tcacgcgctc gcggttgccg
     8881 atgagttcgg cggcgctaat gccttgttgc gccagcattt tggcgacgac gggataggct
     8941 tcggggtgga cggcgctcgc gtccaacggc tctttaccgc cgttaatccg caaaaagcct
     9001 gccgcctgct cgaaggtttt ttcgcccaaa cgcggtactt tcagcaattt tttgcggctg
     9061 tcgaacgcgc cgttttcatc gcggtaggca acgatgtttt gggcaagggt ttgattcaaa
     9121 ccggaaattc gcgccaagag cggggcggag gcggtgttca cgtccacgcc gacggcgttc
     9181 acgcagtctt cgaccaccgc gtccagcgat ttggcgagct ggctttggtt cacgtcgtgc
     9241 tgatactgcc ccacgccgat ggatttgggg tcgattttga ccaactcggc aagcgggtct
     9301 tgtagcctgc gggcgatgga caccgcgccg cgcagggaaa cgtccaagtc ggggaactcg
     9361 cgcgccgcca gttcggacgc ggaataaatc gacgcgccgg cttcggacac gacgatttta
     9421 tgcagcccca ttttcgacat ttcacgcacc agttcgcccg cgattttgtc ggtttcacgg
     9481 ctggcggtgc cgttaccgat ggcgatgagc ttcacgccgt gctgtttaat caggcgcgac
     9541 agcgttgcca acatattgtt ttcttgatgc aaatagacga tgacggtatc cagcagcttg
     9601 ccggtgtcgt ccaccacggc gcatttcacg ccgttgcggt agccggggtc gagacccagc
     9661 gtggtcagcc gtccggcggg cgcagcaagc agcaagtctt tgagattgcg ggcgaacacg
     9721 gtaatcgcgt cggtgtcggc ggcttctttc aaacgattga gagcttcaag ttccaacgac
     9781 aaaaagattt tcgcgcgcca agtcaggcgc acggtgtcgc gcagccattt gtggccgtct
     9841 gaaactttga agcggcgggc gatgatttgc tcgtattcgc tttgctgcgt aatcggcgtg
     9901 tcgtcgggct gatatttgag cgcgatgttc aacacgcctt cgttgcgtcc gcgcaaaacc
     9961 gctagcgcac gatggctggg catcgcacga ataggttcgc ggtggtcaaa ataatcgctg
    10021 aatttttcgc cttcggtttc tttgcctcca acaacttgcg cgtggatttc ggcttcgttc
    10081 cacagcttgt cgcgcagcgt gccgatgagt tccgcgtctt cggcaaactg ctccatcaga
    10141 atcgcacgcg cgccgtccaa cgcggctttg gcatcgggga cgttttcgtt caggtagcct
    10201 tgtgcggcgg cttccacgtc ctgcgactgc tcggcaagca acacgtccgc cagcggctgc
    10261 aaaccgtgtt cgcgcgcgat ttgcgctttg gtgcggcgtt tgggtttgta gggcagatac
    10321 aggtcttcca gcgcggtttt gttatcggcg gcttcgattt gcgccctgag gtcgtctgaa
    10381 agcttgcctt gctcttcaat gctttttaaa acaacggctt tgcgctcttc caattcgcgc
    10441 agatattgca gccgctcggc aagccggcgc aactgcgtat cgtccaaccc gcccgtcgct
    10501 tccttgcggt agcgggcgat aaacggcacg gtcgcgccgt cgtccaaaag ctcgacggcg
    10561 gcggtgattt gcgcggcagt cgcggagagt tcttgggaaa gaatttgagt aatgttcatc
    10621 aatagaattc caacggacag gccgtctgaa atttcagacg gcctgattta aaaacaatcg
    10681 ctttaaggca gcgaattata atattcgtag gctttgtcca tatcttcaaa ctggtacata
    10741 tgcccttttt ccagcaccat cgcattatcg caatattgct tcatggcgct gtggctgtgc
    10801 gacaccaaga tgatggaacg gtctttgcgc ttttcaaaca actcgtactt acatttatcg
    10861 gcaaaacgcg agtcaccaac tgcaatcact tcgtcaatca aatagcaatc aaactctacc
    10921 gccaacgaca aagcaaatgc caaacgcgcc ttcatacctg aagaataacg cttgaccggc
    10981 tcgtaaagat attgccccaa ctcggaaaac tcttcggtaa agttcttcac ataatcgata
    11041 tcgacattgt aaatccggca gatgaaacgc aaattgtcca taccggtcag actgccttga
    11101 aacgcaccgg agaatgccaa aggccaagaa atactcattg tccgcttgat ttcacccgtg
    11161 gtcggcggct caacgccact gatcaaacgg atgagcgtcg atttacctgc accgttgcgg
    11221 ccgagaatac cgattttctc gcccttctcc attttgaagc taatatcgtg caagactgtc
    11281 cgccaacctt ggcgggtcag atagcgtttg gaaacgtgtt caactgaaat cattgcggct
    11341 cgactccttt actgaattta ctgaccatcg ccaagccaaa caacaacaac accagattgc
    11401 acaatacgat ataccaagga ttttcatagg taattacatc gctgccaaaa tatccggcac
    11461 ggaacatttc tgtgccatgc accatcggga tcatcaatgc atactcttgc actttcggag
    11521 gcaaattatg tacaaaaaag aatgcacccg ataacggcat catcacaaaa gtcaatgtgc
    11581 cccaaatctt gccaaacggc tcgaaattaa aggcaatcga acaaatcacc aaacccaaac
    11641 caatcgcaaa aaaagccatc aaaagccaag ccatcagcat ataaaacata tctgccggca
    11701 tttcaatcca gccaatcgca atcaataccg ccataatcac aatctgcgca atggttgcac
    11761 cagcaatttc caaaatcatg cgcgccaaga tggtatccaa aactcttaca ttgcggtgat
    11821 aaagcaagct ggcatttgaa gaaatcgacc caactgcccg ttttgaggca ttacgccaca
    11881 tcatcaacat cggatagcca gtaatcgcaa atgcgacaat attcaaagtt gaatatcggt
    11941 ctgcctttaa aaatttccac atcaagacga taacgaatgt catcagcaac ggctcaacaa
    12001 acagccataa aaagccaata ttattgcgac cgtaacgggt gataatttcc cgcatcaaaa
    12061 gcgcaccgat tacgcgcctt tgaatggcta aagattccca aaatgatgtt ttatgcaagg
    12121 ctttcatcag tttttatgct cacgaatgct ggcagtcaac aggctcaaaa taccataaac
    12181 catcaagccg ataatcagag tggcaacaat gttgtataac cgtttaggct catgtgccaa
    12241 atccggcagg ctcggttgcg agatcacttc caaataaagc tgctgacggt ctgcttcaac
    12301 cttggcactt tccaaagaag tcatggcggc tgccaactgc tgctctgcca actggttttc
    12361 caaatacaca cgctgatatt cggcagcctg attagacaac gaagaatgcc caccgcccga
    12421 aatggcacgt aactgttggt caatttcttt acgcaagctc tgctcacgcg cctgcaaacc
    12481 cggaatctgc ggattctccg gagtgactgc tttcacctga tccagctggg tttgaatcac
    12541 aatcaattca tcttgcagct tggaaaccaa ccccatttgc acttccgatt gcgctttcaa
    12601 atcaaaaacg ccattggcaa tccggtaatc cgtcagattc tgagaggctt cctttacccg
    12661 ctctgtcgcc gttttcacta cttcttccgc atagcgcacc gtatcagcac gtgcacgatc
    12721 gttcaactgg ttaatcaatg cttcaccttg ttttaacaaa gcctcattga ttttcttaga
    12781 ttccagcgca tcaaaggaag ttacattcaa cgtggaaata cccgaaaccg tatcaaaatt
    12841 gatcatcacc tgatttttat agtattgata aaaagcctct tcctcgccac ggaacccaaa
    12901 cccattaaag cggctgaacg catcaccttt ggtttcataa aactcacgca ccggcaagat
    12961 tttacgcagt tcatccaaag acgagcgcga acgcatatac tccccaaccg tgtaaatatc
    13021 atcttgcgca cgggcaaaac ctgtgccctg caaaatggca cccaggccat tgagagaaga
    13081 ttggctttta ggcgagcgca ccacaaagct cgattgcgac gtaaaacgat cggaagcgaa
    13141 gaagccgaaa tacaccaacg aaattaccgt agggataatc accgttaccc aaaataaagg
    13201 gcttagcttt ttaatccaac ttttcttttt cggcttttta cgctcggctt tggtttcagt
    13261 ggcaactgcc acaggaagtt gctcagacat cttacttact cacattaatt agttaaatta
    13321 ttaatactgt tcgcgccact ggtaaccggc gagaacacaa acgacaaaaa tttctgcact
    13381 tcagccaacg gcgcattcga cacatacaat acatctttat tcttcacagg aaagcgctgc
    13441 atagaaaata gcgaatgcgc atcagccata ttcacacgat ataccgttgg aatctctgcc
    13501 tcactgccat aaccttgagc aatccattta tcctgacgtt ctgccggcaa ttccaccaat
    13561 ggcgtatagc ggaacacaaa cacaccacgc gcatcagaac ggcgatcttg caaaccgccc
    13621 atacggccaa tggcttcaga aagcgataag cctctggctg aaaaaccgat ttcttgtgtt
    13681 ctccccaccg cacccataga cgtaaaggta tagggattgg taatcatggt aaccacatca
    13741 ccgcgacgca gcaaaatatt ttgtcgcgga tttgcaacta aatcttccaa ggcaacagtt
    13801 cgtactacat tgccacgtgt cagctgcaca ttcgtatcct gcacatttgc cgttgaacca
    13861 cctaccgcag ccaccgcatc caacacacgc tcaccggctg ccgtcagcgg catacgcaca
    13921 ctattcccag cacgaatcac cgacacattc gccgcattat tctgcaccaa acgcaccatc
    13981 acttgtggct gattggccat ttttttcagg cggcctttaa taatttcctg aacctgacca
    14041 ggcgttttac cgaccaccga aatatcgcca acaaacggca cagaaaccgt accacgtgcc
    14101 gtgaccaact gctctggcaa cttagtttga tgcgcactac ccgagcccat cgaagaaagg
    14161 ccaccaccaa acaatactgc cggcggcgct tcccaaatca taatatccaa tacatcacca
    14221 atatttagcg taccagccga agcataacca tcgccaaact gagtgaatga ctgatttatc
    14281 tgagccttat ataataactg agcaaccgta tgattcacat caatcagctc cacttcagga
    14341 atttgaactt cagattgttg ccctaaagag acaatttttt ttgcgctggg gcctgatgaa
    14401 ggaatcgcag agcatcctac aattaaactt ccacacaata ataatactgc gtgacgaata
    14461 taaaatttca ctttaaacac aagccaaatc ctaatataat tataaatggc ctaattatag
    14521 cacttaatcg aaataaattt atgagtacgt agagtataat tagtattctt ctttccaact
    14581 tccttatact tatatactta tagattctaa aatcatgaaa agaattcttt gcattacagg
    14641 taccagagcc gacttcggca agctaaaacc tttattagcc tatattgaaa atcacccaga
    14701 ccttgaattg catttgattg taactggtat gcatatgatg aaaacatatg gcagaacctg
    14761 caaggaagta actcgagaaa actatcaaca tacatatctg ttttcaaatc aaatccaagg
    14821 tgaaccaatg ggtgccgttt taggcaatac cattacgttt atctctcgtc tatctgatga
    14881 aattgaacct gatatggtca tgattcacgg cgaccgttta gaagcactag caggcgcaac
    14941 tgtaggtgca ttaagcagcc gtttagtttg ccatatcgaa ggtggtgaac tatctggtac
    15001 agtagatgac tccattcgtc attctattag taaactttct catatccact tggtagcaaa
    15061 tgaacaagct gtcactcgcc tagtgcaaat gggagaaaaa agaaagcata ttcacatcat
    15121 cggctccccc gatttagatg ttatggcctc ttccaccctc ccatccttag aagaagtcaa
    15181 agaatattac ggtttaccat acgaaaatta tggtatttct atgtttcacc ccgtgactac
    15241 agaagcacat ttaatgccac aatatgcggc ccaatatttc aaagcattag aattaagtgg
    15301 ccaaaatatc attagcatct accctaataa tgacactggc actgaaagta ttctgcaaga
    15361 attattaaaa tatcaatctg ataaatttat tgcatttcct tccattcgat ttgaatattt
    15421 tttagtctta ttgaaacatg ctaaatttat ggtcggcaac tcaagtgcag gtattagaga
    15481 agctcctctc tacggtgtcc cttcaattga tgttggtaca cgccaaagta accgccatat
    15541 gggaaaatct attattcata cagattatga aactaaaaat atctttgatg cgattcaaca
    15601 agcatgcagt ttaggcaaat ttgaagcaga tgataccttt aatggcggag atactcgcac
    15661 cagcacagaa agatttgctg aagtaatcaa caatcctgaa acgtggaatg tttctgctca
    15721 aaaacgtttt atcgatttga atctttaaat tatggaaaaa caaaatattg cggttatact
    15781 tgcgcgccaa aactccaaag gattgccatt aaaaaatctc cggaaaatga atggcatatc
    15841 attacttggt catacaatta atgctgctat atcatcaaag tgttttgacc gcataattgt
    15901 ttcgactgat ggcgggttaa ttgcagaaga agctaaaaat ttcggtgtcg aagtcgtcct
    15961 acgccctgca gagctggcct ccgatacagc cagctctatt tcaggtgtaa tacatgcttt
    16021 agaaacaatt ggcagtaatt ccggcacagt aaccctatta caaccaacca gtccattacg
    16081 cacaggggct catattcgtg aagctttttc tctatttgat gagaaaataa aaggatccgt
    16141 tgtctctgca tgcccaatgg agcatcatcc actaaaaacc ctgcttcaaa tcaataatgg
    16201 cgaatatgcc cccatgcgcc atctaagcga tttggagcag cctcgccaac aattacctca
    16261 ggcatttagg cctaatggtg caatttacat taatgatact gcttcactaa ttgcaaataa
    16321 ttgttttttt atcgccccaa ccaaacttta tattatgtct catcaagact ctatcgatat
    16381 tgatactgag cttgatttac aacaggcaga aaacattctt aatcacaagg aaagctaaat
    16441 gcaaaacaac aacgaattta aaattggtaa tcgttcagta ggttacaacc acgaaccatt
    16501 gattatctgt gaaatcggca tcaatcatga aggctcttta aaaacagctt ttgaaatggt
    16561 tgatgctgcc tataatgcag gcgctgaagt tgttaaacat caaacacaca tcgttgaaga
    16621 cgaaatgtct gatgaggcca aacaagtcat tccaggcaat gcagatgtct ctatttatga
    16681 aattatggaa cgttgcgccc tgaatgaaga agatgagatt aaattaaaag aatacgtaga
    16741 gagtaagggt atgattttta tcagtactcc tttctctcgt gcagctgctt tacgattaca
    16801 acgtatggat attccagcat ataaaatcgg ctctggcgaa tgtaataact acccattaat
    16861 taaactggtg gcctcttttg gtaagcctat tattctctct accggcatga attctattga
    16921 aagcatcaaa aagtcggtag aaattattcg agaagcaggg gtaccttatg ctttgcttca
    16981 ctgtaccaac atctacccaa ccccttacga agatgttcga ttgggtggta tgaacgattt
    17041 atctgaagcc tttccagacg caatcattgg cctgtctgac cataccttag ataactatgc
    17101 ttgcttagga gcagtagctt taggcggttc gattttagag cgtcacttta ctgaccgcat
    17161 ggatcgccca ggtccggata ttgtatgctc tatgaatccg gatactttta aagagctcaa
    17221 gcaaggcgct catgctttaa aattggcacg cggcggcaaa aaagacacga ttatcgcggg
    17281 agaaaagcca actaaagatt tcgcctttgc atctgtcgta gcagataaag acattaaaaa
    17341 aggagaactg ttgtccggag ataacctatg ggttaaacgc ccaggcaatg gagacttcag
    17401 cgtcaacgaa tatgaaacat tatttggtaa ggtcgctgct tgcaatattc gcaaaggtgc
    17461 tcaaatcaaa aaaactgata ttagttaata ataaaataga ttaagctatt cttaaattca
    17521 gaatattgct tatctatatt aaaaatttct aatttttaag gttctgattg aaatcagaac
    17581 cttatttcaa ctattacttt ttactcataa tcgaattata tactttagga ctttataata
    17641 tggctgttat tatatttgtt aacggaattc gggctgtaaa tggccttgtt aaatcatcta
    17701 tcaatactgc aaacgctttt gctgaagaag gactggatgt tcatttaatt aattttgttg
    17761 gcaatattac tggagcagag catttatacc ccccattcca cttacatccc aatgtcaaaa
    17821 cctccagcat catagattta tttaatgaca ttccagaaaa tgttagctgc cgaaatactc
    17881 ctttttattc tattcatcaa caattcttca aagctgaata tagtgcccac tataagcatg
    17941 ttttgatgaa aattgaatct ttattatctg aagaagatag cattatcttc actcatcctc
    18001 ttcaactgga aatgtatcgt ttagcgaata ataatattaa gtcaaaagcc aagctaattg
    18061 tacaaattca tggtaactat atggaagaaa tccataacta tgaaattttg gcacgaaata
    18121 tcgattatgt tgattatctt caaacggtat ctgatgaaat gctggaagaa atgcattccc
    18181 atttcaaaat caaaaaagac aaattagttt ttattccaaa catcacttat cccatttcat
    18241 tagaaaaaaa agaagctgat ttctttatta aggataatga agacattgat aatgctcaga
    18301 aatttaaacg tatctctatt gttggcagta ttcagccaag aaaaaaccaa ttggatgcca
    18361 ttaaaatcat caataaaatt aaaaatgaaa attacatttt acagatatat ggcaaatcta
    18421 ttaataaaga ttactttgaa ttaattaaaa aatatattaa agacaataag ttacaaaacc
    18481 gtatcttatt caaaggtgaa tcttccgagc aggaaattta tgagaataca gatatcctaa
    18541 tcatgacatc tcaaagcgaa ggctttggtt atatatttct agagggtatg gtgtacgata
    18601 tccctatcct tgcctataat tttaaatatg gagcgaatga ttttagcaat tataatgaaa
    18661 acgcttcagt ttttaaaact ggtgatattt ctggaatggc aaaaaaaata attgagctat
    18721 taaataaccc agaaaaatat aaagaattag ttcaatataa tcacaatcgc ttcttaaaag
    18781 aatatgcaaa agatgtggtt atggctaaat atttcactat tcttccgcgc agctttaata
    18841 acgtatcatt atcgtctgct ttcagccgaa aagaattgga cgaattccaa aatattactt
    18901 tttctattga agattctaat gatttagctc atatttggaa tttcgagcta accaatcctg
    18961 cacaaaatat gaattttttt gctttagttg gcaagcgaaa atttccaatg gatgctcata
    19021 tccaaggaac acagtgtacg attaagatag ctcataaaaa gacagggaat ttattgtcgc
    19081 ttttactaaa aaaacgaaat cagttgaatt tatcaagggg atatacctta attgcagaag
    19141 ataatagcta tgaaaaatat attggagcaa tatctaataa aggtaacttt gaaattattg
    19201 caaataaaaa gaactcattt agttacttaa acaaaagtac cttagagttg catgagattc
    19261 cccatgaact acatcagaat aaattactga ttgctttacc caacatgcaa acgcctctaa
    19321 aaattactga tgataattta atacctatcc aagcctccat aaaattagaa aagattggaa
    19381 atacttatta cccatgtttc ttgccatctg gcatatttaa taatatctgc ttagattacg
    19441 gtgaagaatc caaaattatt aattttagta aatattctta taaatatatc tatgactcaa
    19501 ttcgtcatat tgagcaacat acagatatat cggatattat cgtttgcaat gtttattctt
    19561 gggaacttat tcgtgcctca gttattgaga gccttatgga atttaccgga aaatgggaaa
    19621 aacactttca gacttctcct aaaattgatt atcgatttga tcatgaaggt aagcgttcga
    19681 tggatgatgt cttttcagaa gaaacattta ttatggaatt tccgcgtaaa aatggtatag
    19741 ataagaaaac agcagccttc caaaatatac caaacagtat tgtaatggag tatccgcaga
    19801 ccaatggtta cagtatgcgc agtcattcac tgaaaagtaa tgtagttgcg gcaaaacatt
    19861 ttcttgaaaa attaaataaa attaaggtag atattaaatt taaaaagcat gaccttgcaa
    19921 acatcaaaaa aatgaatcga attatttatg agcatttagg cattaacata aatatcgaag
    19981 catttctaaa accacgatta gaaaaattta agcgtgaaga aaaatatttt catgatttct
    20041 tcaaaagaaa taattttaaa gaggtaattt ttccaagcac ttattggaat ccaggtatta
    20101 tttgtgctgc acataaacaa ggtattaagg tatctgatat tcaatatgct gccattactc
    20161 cttatcatcc tgcgtatttt aaattaccaa aatcacatta cgttgctgat aaattgttct
    20221 tatggtctga atattggaat catgagcttt taccaaatcc aacacgagag attggttctg
    20281 gtgccgcata ttggtatgca ttagatgatg tgagattttc agaaaaactg aattatgact
    20341 atatctttct atctcaaagt aggatttctt cgcgcttgct tagttttgca attgagtttg
    20401 cattaaaaaa tcctcaacta cagcttttat tttctaagca tccagatgaa aatatagatt
    20461 taaagaacag aattattcct gataatctta taatctccac ggaatcttct atacaaggca
    20521 tcaatgaatc tcgcgttgct gtaggtgttt attcaactag cttatttgag gcattagcat
    20581 gcggcaaaca aacttttgtt gttaaatatc cgggatatga aattatgtca aatgaaatag
    20641 attcagggtt attctttgca gtagaaacac ctgaagaaat gcttgagaaa acaagcccga
    20701 attgggtggc tgtggcagat attgaaaacc agttttttgg ccaagaaaaa taatttttaa
    20761 gttaatcttt aaaagtgcaa tatttttctt attttaaata ttgcacttta ttcttttaat
    20821 cataggaact cacatgtatt ctgaacaggg aattaataat actattaaca tatctactac
    20881 atctttaacc aatgccacgc aactaactgt gatcgggaat aataactctg tatatatagg
    20941 taataattgt aaaatcgtca gctccaatat tagattaaaa ggaaataata taaccttatt
    21001 tatagctgat gatgtagaaa tcatgggact agtatgttcc cttcattcgg actgctcttt
    21061 acaaattcaa gccaagacca ctatgggcaa tggagaaatt accattgctg aaaaaggtaa
    21121 gattagtatt ggcaaagatt gtatgctggc acatggatat gaaattagaa atactgatat
    21181 gcatccaatt tattctttag aaaatggcga acgaataaac catggtaaag acgttattat
    21241 cggtaatcac gtgtggcttg gccgcaatgt tactatatta aaaggtgtat gtattccaaa
    21301 taatgtagtt gtaggttctc atactgtgct atataaaagt tttaaagaac ctaattgtgt
    21361 aatagcaggt tcacctgcaa aaatagtaaa agaaaatatt gtatggggaa gaaaaatgta
    21421 tcattcaact atgtatgatg accctacttt aaatgaattt tataaata
//
LOCUS       DAWGBY010000020        20815 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.020, whole genome shotgun sequence.
ACCESSION   DAWGBY010000020 DAWGBY010000000
VERSION     DAWGBY010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20815
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.020"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(63..147)
                     /locus_tag="WHG62_000681"
     tRNA            complement(63..147)
                     /locus_tag="WHG62_000681"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(111..113),aa:Leu,seq:caa)
     gene            423..1076
                     /locus_tag="WHG62_000682"
     CDS             423..1076
                     /locus_tag="WHG62_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ1724835.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPKTRGTDMRKEDIGGDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1155..1808
                     /locus_tag="WHG62_000683"
     CDS             1155..1808
                     /locus_tag="WHG62_000683"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ1724836.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1912..2811
                     /locus_tag="WHG62_000684"
     CDS             1912..2811
                     /locus_tag="WHG62_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ1724837.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2808..4097
                     /gene="hisD"
                     /locus_tag="WHG62_000685"
     CDS             2808..4097
                     /gene="hisD"
                     /locus_tag="WHG62_000685"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ1724838.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLKTAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4143..5240
                     /locus_tag="WHG62_000686"
     CDS             4143..5240
                     /locus_tag="WHG62_000686"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ1724839.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5237..6154
                     /gene="hisB"
                     /locus_tag="WHG62_000687"
     CDS             5237..6154
                     /gene="hisB"
                     /locus_tag="WHG62_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ1724840.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6249..7118
                     /locus_tag="WHG62_000688"
     CDS             6249..7118
                     /locus_tag="WHG62_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ1724841.1"
                     /translation="MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            7243..7674
                     /locus_tag="WHG62_000689"
     CDS             7243..7674
                     /locus_tag="WHG62_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ1724842.1"
                     /translation="MNRLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQESEQDRRERLLSLTETGKAHAAPLTE
                     SAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
     gene            7686..8549
                     /locus_tag="WHG62_000690"
     CDS             7686..8549
                     /locus_tag="WHG62_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HEZ1724843.1"
                     /translation="MENVETHSQNHRKRLIGTFFLVGLENLLMLVYPVFGGWAINAVI
                     AEQAWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVT
                     ARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWAGVSAVGILALFLWLLPR
                     FAAISENLYFRLKNSLERDNHFIRKGDRRQLDRHYGLLARLRVLISNREAFGYLCVGT
                     AMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRI
                     GGLERNIKAGT"
     gene            complement(8600..9652)
                     /gene="sohB"
                     /locus_tag="WHG62_000691"
     CDS             complement(8600..9652)
                     /gene="sohB"
                     /locus_tag="WHG62_000691"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ1724844.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(9756..9845)
                     /locus_tag="WHG62_000692"
     tRNA            complement(9756..9845)
                     /locus_tag="WHG62_000692"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9809..9811),aa:Leu,seq:taa)
     gene            complement(9948..10021)
                     /locus_tag="WHG62_000693"
     tRNA            complement(9948..10021)
                     /locus_tag="WHG62_000693"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9987..9989),aa:Cys,seq:gca)
     gene            complement(10047..10122)
                     /locus_tag="WHG62_000694"
     tRNA            complement(10047..10122)
                     /locus_tag="WHG62_000694"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10087..10089),aa:Gly,seq:gcc)
     gene            complement(10144..10219)
                     /locus_tag="WHG62_000695"
     tRNA            complement(10144..10219)
                     /locus_tag="WHG62_000695"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10184..10186),aa:Gly,seq:gcc)
     gene            complement(10243..10318)
                     /locus_tag="WHG62_000696"
     tRNA            complement(10243..10318)
                     /locus_tag="WHG62_000696"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10283..10285),aa:Gly,seq:gcc)
     gene            complement(10344..10419)
                     /locus_tag="WHG62_000697"
     tRNA            complement(10344..10419)
                     /locus_tag="WHG62_000697"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10384..10386),aa:Gly,seq:gcc)
     gene            complement(10499..11062)
                     /gene="pgsA"
                     /locus_tag="WHG62_000698"
     CDS             complement(10499..11062)
                     /gene="pgsA"
                     /locus_tag="WHG62_000698"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ1724845.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLAAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NILMFIASLLTVWSMLYYLKMAWKEIA"
     gene            complement(11168..11591)
                     /locus_tag="WHG62_000699"
                     /pseudo
     CDS             complement(11168..11591)
                     /locus_tag="WHG62_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11681..11854)
                     /locus_tag="WHG62_000700"
     CDS             complement(11681..11854)
                     /locus_tag="WHG62_000700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724846.1"
                     /translation="MPSENISDGILSVMLPNTVNNILSRLFQTAFEKQGVSVKYSGLT
                     KIRTRRRSRRQYK"
     gene            complement(11872..12207)
                     /locus_tag="WHG62_000701"
     CDS             complement(11872..12207)
                     /locus_tag="WHG62_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ1724847.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            12336..13241
                     /gene="mtrA"
                     /locus_tag="WHG62_000702"
     CDS             12336..13241
                     /gene="mtrA"
                     /locus_tag="WHG62_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HEZ1724848.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     MVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(13303..13791)
                     /locus_tag="WHG62_000703"
     CDS             complement(13303..13791)
                     /locus_tag="WHG62_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ1724849.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            13938..14840
                     /locus_tag="WHG62_000704"
     CDS             13938..14840
                     /locus_tag="WHG62_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ1724850.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(14881..16011)
                     /locus_tag="WHG62_000705"
     CDS             complement(14881..16011)
                     /locus_tag="WHG62_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1724851.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPSAENPTSAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRTNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            16216..18840
                     /gene="alaS"
                     /locus_tag="WHG62_000706"
     CDS             16216..18840
                     /gene="alaS"
                     /locus_tag="WHG62_000706"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ1724852.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     TDLVKEMGDAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAILANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELAKAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKPLTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPEMLVSVESWLCQKLS"
     gene            18902..19633
                     /locus_tag="WHG62_000707"
     CDS             18902..19633
                     /locus_tag="WHG62_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724853.1"
                     /translation="MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYH
                     SSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDK
                     NYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEV
                     LSAAQSLANIYCNKVRLIDGHVWKE"
     gene            20216..>20815
                     /locus_tag="WHG62_000708"
     CDS             20216..>20815
                     /locus_tag="WHG62_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ1724854.1"
                     /translation="MQEIGRTKPSALPEYYAVSDFAHFHLYRRVPEEGVENQWQFPLE
                     ALPEYITRGVFDFMFGIEAKVRQIQEEADIQAAAAIGRLHDALKEEGIYEEHELRLFI
                     TRLLFLFFADDSAVFQRNYLFQDFLESCKETDTLGDKLNQLFEFLNTPDQKRSKTQSE
                     KFKGFEYVNGGLFKERLRTFDFTAKQHRALIDCGNFDWRN"
BASE COUNT         5344 a         5692 c         4971 g         4808 t
ORIGIN      
        1 ttagtcttat ctatttcatt aaacagcaat agacaaaaaa ataaccgctc taaaagcggt
       61 tgtggtgccc agggtcggac tcgaaccgac acaccttgcg gcgggggatt ttgagtcccc
      121 tgcgtctacc aatttcgcca cctgggctgg tgaagaagtc gtcattataa tggcttttga
      181 aattctgtaa accttttttt gaaattattt tatctgtttt tattttattt ttgattttaa
      241 atagaatttt tattatttta atcttactgt tctttccgct ccaaagattc tgtatgattc
      301 ggcaattcct gccgtgcaga caacgtaaaa aaatactaca ttaaatctgc caaacgcgtt
      361 aagatggaaa tattcaaatt ccgtacgaat caggttttgc tatttattct tgggagattg
      421 tcatgttttc cgtaccgcgt tcctttttgc cgggcgtttt cgtacttgcc gcgcttgccg
      481 cctgcaaacc tcaagacaac agtgcggcgc aagccgcttc ttcaagtgca tccgcgtcgg
      541 ctgcggaaaa tgcggcaaag ccaaaaacgc gcggtacgga tatgcgtaag gaagacatcg
      601 gcggcgattt cacgctgacc gacggcgaag gcaagccttt caacctgagc gatttgaaag
      661 gcaaggtcgt gattctgtct ttcggcttta cgcactgtcc cgatgtctgc ccgacagagc
      721 ttttgacgta cagcgacacg ttgaagcagt tgggcgggca ggctaaggac gtgaaagtgg
      781 tgttcgtcag catcgatccg gaacgcgaca cgcctgaaat catcggcaag tatgccaaac
      841 agttcaatcc ggactttatc ggtctgacgg caacgggcgg ccaaaacctg ccggtcatca
      901 agcagcaata ccgcgtggtt tctgccaaag tcaatcaaaa agacgacagc gaaaactatt
      961 tggtcgacca ctcttccggt gcgtatctca tcgacaaaaa cggtgaggtt gccattttct
     1021 cgccttacgg aagcgagccg gaaacgattg ctgccgatgt aaggactctg ctctgataaa
     1081 accgtatgcc gtctgcaccg tcggcgcctg ttcagacggc attattgttt caaccgacaa
     1141 aggacatcca caccatgcag gataatgctt tgaccatcgc cttatccaag gggcgcattt
     1201 ttgaggagac gctgccgctg cttgccgctg ccggcattgt tccgactgaa gagcctgaaa
     1261 aatcgcgcaa gctgattatc gggacgaacc atgaaaacat ccgccttgtc attgtccgcg
     1321 caaccgatgt gccgacttat gtccgctacg gcgcggcgga cttcggcatt gcgggcaaag
     1381 acgtgctgat cgaacacggc ggcacggggc tttaccggcc tttggatttg gagattgcca
     1441 agtgccgcat gatggttgct gtgcgtaaag ggtttgatta cgaagcagct tcgcaacccg
     1501 gatgccgtct gaagattgcc acaaagtatc ctgaaatcgc ggcatctcat tttgccggca
     1561 agggtgtcca tgtggacatt atcaaactgt acggctcgat ggaacttgcg ccgctggtcg
     1621 gcttgagcga tgcgattgtg gacttggttt cgacgggcaa caccttgaag gcaaacggct
     1681 tggaagcagt cgaacacatc gtcgacattt ccagccgcct ggtggtcaac aaggctgctt
     1741 tgaaaacgaa atacgcgctg ctggagccga ttattcaggc gttcggcggc gcagtgaagg
     1801 cgaagtaagc attcatttga ataaagatgc gttttcagac gaccctatcc gttcccaccg
     1861 acaggtcttc tgaaaatatc accggcagta aactgtatag gagaagttaa aatggttgca
     1921 aaaataaaaa aattctcaga ttcaaccctt tccgttttga ataacggcga gcgtcggttt
     1981 tatgtctatt gtctgaccga cctgaaaaaa gacaaaatcc tctacatcgg caaaggctgc
     2041 ggtaatcgta tcttcgagca tgaatgggtt gctagtcgtt cacaagatcc agtctccggc
     2101 gaaattatcg atcggaaact caaagccatc tccaaatgca agaaactcgg tcgctatatc
     2161 atcagctatc atctgactga agtcgaagca ctcgccgccg aatctgcctt aattcatttt
     2221 gttaaatctg tcttgggtaa aaaactcaaa aataaaattg ccgggcatgg tccgggtggt
     2281 attagcgtag aagaactaga tcgccgcttt ggattctctt ctctcccact taacgagatt
     2341 aaccccgacg ggctgattct cgccatcaaa atccacaatg ctttcgattt agatactgac
     2401 gaagaattag actacctttt cgacaaccaa gacgatgcca acctcaaatc gcgtacgttg
     2461 ggcaactggg ttatcggtaa agatgttgct tcaaaagtga aatacgttat cggcgttcac
     2521 accggtctgc aaaacgctgt tgtcagtgca tacgaagtgg acggttttga aacaatggtt
     2581 gaggaaacca aaaacggtag aaaacaatcc cgttaccgtt tccgcactac ctctcgtagc
     2641 gaagaggtat tagccaaact cggtctgcaa caaaaatgcc tgcccgaatt gaagtttggt
     2701 agcgggggag aaaaagcgta tatcagaccc aaaacagaga cagaaactga acaagagaat
     2761 attcagacga cccccaatcc aaaaataaaa aaggaaaaaa ccaaatcatg aaaaaactca
     2821 acacccaatc gcccgatttc caagccggac tcaaagccct gctggctttt gaaaccgcgc
     2881 aaaaccccga aaccgaacgc atcgtcgccg acatttgcgc cgacgtgcaa aagcgcggcg
     2941 atgcggcttt gattgaatac accaacaaat tcgatcagac aaacgctaaa agcatcgatg
     3001 atttaatact cacgcaagcc gatttgaaaa ccgcgttcga gcgcattccg aacgacgttc
     3061 agacggcatt gcagaccgcc gcccgccgtg tcgaaagcta ccaccaacgc caaaaaatgg
     3121 aatcgtggag ctacaccgat gaagacggca cgctgttggg acaacaaatc acaccgcttg
     3181 accgcgtcgg catttacgtc cccggcggca aggcggcgta tccgagttcc gtcatcatga
     3241 acgccatgcc cgcccacgtc gcaggtgtga aagaaatcat catggtcgtg ccgacaccaa
     3301 aaggcgaacg caacgacatc gtacttgccg ccgcatacgt cgccggcgta accaaagtct
     3361 tcaccgtcgg cggcgcgcag gcggttgccg ccctcgccta cggcacggaa accatccccc
     3421 aagtcgataa aatcactggt ccgggcaacg ccttcgtcgc cgccgccaaa cgccgcgtgt
     3481 tcggcgtggt cggcatcgac atggtggcgg ggccgtctga aatcctggtc atcgccgacg
     3541 gcacgacacc tgccgattgg gtggcgatgg atttgttcag ccaggccgaa cacgacgaaa
     3601 ttgcccaagc catcctcatc ggcacgtcgc aagcgtatct cgacgaagta gaagccgcta
     3661 tggaccgcct gatcgaaact atgccgcgcc gcgacatcat cgaagcctcg ctcggcaaca
     3721 ggggcgcgat gatactcgcc aaagacttgg acgaagcctg cgaaatcgcc aactacattt
     3781 cccccgaaca cttggaactg tcagtcgaaa atccgcagga atgggcgaaa aaaatccgcc
     3841 acgccggtgc gattttcatg ggacgctaca ccggcgaaag cctcggcgac tactgcgccg
     3901 gtccaaacca tgtattgccc accagccgca ctgcccgctt ctcctcgcct ttggggacat
     3961 atgatttcca aaaacgctcc agcctgattc aggtttcgga acagggcgcg caaaaattag
     4021 gcgaaaccgc cagcgtgctg gcacacggcg aaagcctgac cgcccacgcc cgcgcggcag
     4081 agttccgtat gaaataatgc cggaacggcg tacaggcata ttccaaccat taaggaaaca
     4141 cgatgaaatc cgtccgctcc ttcatccgcg acgacataca agctatgtcg gcatatcaga
     4201 ttgccgacgt tccgcccggc tttgccaaac tcgattcgat ggaaagtccc gtccaccctt
     4261 ttgccggaca tgaaacgctg ttgcaggaat ggcaggcacg gcttgccgcc gcgcccatcc
     4321 atctttaccc caatccctcc ggcagcggtt tacaggaagc attacgttcg gcgttcgaca
     4381 ttcccgactg cgccgacatc gcgctgggca acggctcgga cgagctgata cagttcatca
     4441 cgatgctgac cgccaaaccg ggcgcggcaa tgttggcagc cgaacccagt ttcgtcatgt
     4501 accgccacaa cgccgcgctg tacggcatgg attatgtcgg cgttccactg aacggagatt
     4561 tcaccctcaa cctgcccgcc gtcctcgaag ccgtcaggaa gcaccgccct gccctgacct
     4621 ttatcgccta ccccaacaac cccaccggcg tatgtttcac gcgtgccgaa atcgaagccg
     4681 tcatcgaagc ttcagacggc atcgtcgtcg tcgacgaagc ctacggcgca ttcaacggcg
     4741 acagcttcct gccgcaggcg ggcagcattc ccaacctcat cgtcatgcgt accgtcagca
     4801 aaatcggttt tgccggactg cgtatcggct atgcggcagg ctgtcccgaa gtcatcggcg
     4861 aactgcaaaa aatcctgccg ccctacaata tgaaccaact gagcctgacc accgccaaac
     4921 tcgccctgca acactacggc atcatctctg ccaacatcga cagcctgaaa aacgaacgcg
     4981 aacggatgtt cgccgaattg ggcaaaatat gccgtctgaa cacctttcca agtcaggcaa
     5041 acttcattac catacgcgta cccgatgccg atttgttgtt tgacacgctc aaacaaaacc
     5101 gcatcttggt taaaaaactg catggcgcgc acccgctttt ggaacactgc ctgcgcatta
     5161 ccgtaggcag ccccgcacaa aacgatgccg ttctcaacat cattcgccaa ctttactgcc
     5221 aaccaacgga tttcctatga atttgactaa aacacaacgc caactgcaca actttctgac
     5281 cctcgcccaa gaagcaggtt cgctgtccaa gctcgccaaa ctctgcggct accgtacccc
     5341 cgtcgcactc tacaaactca aacaacgcct tgaaaagcag gcagaagacc cagatgcacg
     5401 cggcatccgt cccagcctga tggcaaaact cgaaaaacac accggcaaac ccaaaggctg
     5461 gctcgacaga aaacaccgcg aacgcactgt ccccgaaacc gccgcagaaa gcaccggaac
     5521 tgccgaaacc caaattgccg aaaccgcatc tgctgccggc tgccgcagcg ttaccgtcaa
     5581 ccgcaatacc tgcgaaaccc aaatcaccgt ctccatcaac ctcgacggca gcggcaaaag
     5641 caggctggat accggcgtac ccttcctcga acacatgatc gaccaaatcg cccgccacgg
     5701 catgattgac atcgacatca gctgcaaagg cgacctgcac atcgacgacc accacaccgc
     5761 cgaagacatc ggcatcacac tcggacaagc aatccggcag gcactcggcg acaaaaaagg
     5821 catccgccgt tacggacatt cctacgtccc gctcgacgaa gccctcagcc gcgtcgtcat
     5881 cgacctttcc ggccgccccg gactcgtgta caacatcgaa tttacccgcg cactaatcgg
     5941 acgtttcgat gtcgatttgt ttgaagaatt tttccacggc atcgtcaacc acagtatgat
     6001 gaccctgcac atcgacaacc tcagcggcaa aaacgcccac catcaggcgg aaaccgtatt
     6061 caaagccttc gggcgcgccc tgcgtatggc agtcgaacac gacccgcgca tggcaggaca
     6121 gaccccctcg accaaaggca cgctgaccgc ataaaaaacc ataccgtctg aaacacccgc
     6181 aggcttttca gacggtatcg gaacagataa gattacacta cactacaaac agaaaaggag
     6241 taaacatcat gtccgcaaac gaatacgcac aaatcggctg gataggctta gggcaaatgg
     6301 gtctgcctat ggtaacgcgg ctcttggacg gcggcatcga agtcggcgta tacaaccgct
     6361 ctcccgacaa aactgccccc atctccgcca aaggcgcaaa agtttacggc aacaccgccg
     6421 aactcgtccg cgactatccc gtcattttcc tgatggtttc cgactatgcc gccgtgtgcg
     6481 acatcctgaa cggagtccgc gacggattgg ccggcaaaat catcgtcaac atgagcacca
     6541 tctccccgac cgaaaacctc gccgtcaaag cacttgtcga agccgcaggc ggacagtttg
     6601 ccgaagcacc cgtttccgga tcggtcgggc ccgccaccaa cggcacgctg ctgattctgt
     6661 tcggcggcag cgaagccgtt ttaaacccgc tgcaaaaaat attttccctc gtcggcaaaa
     6721 aaaccttcca tttcggcgat gtcggcaaag gttcgggcgc gaaactcgtc ttgaactcgc
     6781 tcttgggcat tttcggcgaa gcgtacagcg aagcgatgct gatggcgcgg cagttcggca
     6841 tcgataccga caccatcgtc gaagccatcg gcggctcggc aatggactcg cccatgttcc
     6901 aaaccaaaaa atctctgtgg gcaaaccgcg aattcccgcc cgccttcgcc ctcaaacacg
     6961 cctccaaaga cctcaacctc gccgtcaaag agcttgaaca ggcaggcaac accctgcccg
     7021 ccgtcgaaac cgttgctgcc agctaccgca aagcagtcga agccggctac ggcgaacagg
     7081 acgtttccgg cgtttacctg aaattggcag aacactgatt gccttttcca aacacaatgc
     7141 cgtctgaaca tatttcagac ggcattttta tcaccccacg cttaaaatca gtcccgatta
     7201 tgactatact ccgcgcaaat ttagtcaata tcaagaccaa ttatgaaccg actcgaccaa
     7261 cttggcaccc gtatcaacct gatttgcaat gtcttcgaca aatggatcgg gcagcaggat
     7321 ttgaattaca acctctttgc cgtactttat accctggcaa ccgaaggcag ccgcacgcaa
     7381 aagcatatcg gcgaagagtg gagtctgccc aaacagaccg tttcaggcgt atgcaaaacc
     7441 cttgccggac aagggttgat tgaatggcag gaaagcgaac aggaccggcg cgaacggttg
     7501 ctgtcgttga ccgaaacagg caaagcccat gccgcacctt taacagaaag cgcgcaggaa
     7561 ttcagcgaca aagtatttgc cacattcggc gacaagcgca caacccggct gtttgccgat
     7621 ttggatgcac tggcggaagt gatggaaaaa acaatctcgg aaaataaaaa atagggagca
     7681 aagatgtgga aaatgttgaa acacatagcc aaaaccaccg caagcgattg attggcacat
     7741 tttttctggt cggactggaa aaccttttga tgctggtgta tccggtgttt ggcggctggg
     7801 cgattaatgc cgtgattgcg gagcaggcgt ggcaggcgtt gctgtacgct ttggttgtgc
     7861 ttttgatgtg gctggtcggt gcggcgcggc ggattgccga tacgcgcacg tttacgcgga
     7921 tttataccga aatcgccgtg ccggtcgtgt tggaacaacg gcagcgacaa gtcccgcatt
     7981 cggcggtaac tgcacgggtt gccctgtcgc gtgagtttgt cagctttttt gaagaacacc
     8041 tgccgattgc cgcgacatcc gtcgtatcca tattcggcgc gtgcatcatg ctgctggtgc
     8101 tggaattttg ggccggcgtg tcggcggtgg gcatacttgc gttgttttta tggcttttgc
     8161 cacgttttgc cgccatcagc gaaaacctgt atttccgcct gaagaacagc ttggaacgcg
     8221 acaaccactt tatccgaaaa ggcgaccggc ggcagctgga ccgccattac ggactgcttg
     8281 cgcgcctgcg tgtgctgatt tccaaccgcg aagccttcgg ctatctctgc gtcggcacgg
     8341 cgatgggtat tttgttcggc tttgcttttg tgatgatgac gctcaaaggc tacagcagcg
     8401 cggggcatgt ctattcggtc ggcacttatc tgtggatgtt tgccatgagt ttggacgacg
     8461 tgccgcgatt ggtcgaacaa tattccaatt tgaaagacat cggacaacgg atagggggat
     8521 tggaacggaa catcaaagcc ggaacttgaa aaatgccgtc tgaacacgct tcagacggca
     8581 tttccatccg ttcggcaaac tacatcacat ccgcccgccg gttgacaagt ttggcaaaca
     8641 acttttcaac agaagcttcc gcctgcaaac caatgcgctg gatcaggctt tgcttctcct
     8701 gatatttcac ttcgataacc tgtttgtttt caaacgcttt caacaacaaa tcatcactgg
     8761 tcgaaatctc gtcaatcaag ttcaacgcca acgcctgccg accgaaccaa tgctcgcccg
     8821 ttgccacttc ctcaatatcc aattgagggc ggttctcgct gacaaactgc ttgaacaact
     8881 gatgcgtttc ctccagttcc tgtcggaatt tctgtttgcc cttttccgta ttttcaccca
     8941 taaaagtaac cgtgcgctta aattctcccg ccgtcatcac atccacatcg atatcatgtt
     9001 ttttcaacag gcggtggata ttcggtactt ccgccaccac acccaccgaa ccgacaatcg
     9061 caaacggagc ggaaacaatt ttatccgcca cacacgccat catataaccg ccgctcgccg
     9121 ccaccttatc gacggcgacg gtcagcggaa tattgcgttc gcgcaaacgc ctaagctgcg
     9181 aagccgccaa accgtaaccg tgaaccacgc cgcccggact ttccaatcta agcagaacct
     9241 catcttcagg cttggcaatc aaaagcaccg ccgtaatctc atgacgcaag gattctacgg
     9301 cgtgtgcata caaatcgccg tcaaaatcca acacaaaaag gcgggatttt tgcgtttcgg
     9361 cagatttctc cccaccctcc ttcaaacgct ttttctctgc tttggcttcc gccttttcct
     9421 ttttcttttc ctctttttcc tgatgttttg cctcttcccc gcttaaaaag aatgcttcaa
     9481 acgattgccg ctgtttttta taattttccg aaaaatccgt cagtacgaca ctgccgcttt
     9541 ccgactgttt cttactctgt acgatagcca acacaatcag cgcaattgcg ccgaacacgg
     9601 taagcagttc gagcaggaaa ataccgtaat tcagtaaaat ttctttccac attgattgga
     9661 tttcctcttg ttcaggcatg aacatgtcaa tattgtccat ccccgtccga cagataaaaa
     9721 aataaccgct tggagcggta ttgttatttt cagcttggtg cccggagccg gaatcgaacc
     9781 ggcacgggat gtttagtccc gacggatttt aagtccgttg tgtctaccta tttcaccacc
     9841 cgggcatttg tgaaaggtgg aggcgggggc gcggatttta accggcctgt atgaagattg
     9901 cactcctcat agcataaaca ctctgccacc ccgccatggt acgataatgg aggcgagagt
     9961 cggaatcgaa ccggcgtaga cggatttgca atccgctgca taaccacttt gctatctcgc
    10021 cctaaaactg gcttatctaa aaaacttgga gcgggaaacg agtctcgaac tcgcgacctc
    10081 aaccttggca aggttgcgct ctaccaactg agctattccc gcgcgttcaa acatatcggt
    10141 ttttggagcg gaaaacgagt ctcgaactcg cgacctcaac cttggcaagg ttgcgctcta
    10201 ccaactgagc tattcccgcg ttgatatgtt tgaaataaaa cttggagcgg gaaacgagtc
    10261 tcgaactcgc gacctcaacc ttggcaaggt tgcgctctac caactgagct attcccgcaa
    10321 tgattgtggg aaaatgaaat ttttggagcg ggaaacgagt ctcgaactcg cgacctcaac
    10381 cttggcaagg ttgcgctcta ccaactgagc tattcccgcc cgatttcatt ctccaacatc
    10441 gaagagacac aattattatg gattctgttt ttgccgtcaa gctattttta tgtttttttc
    10501 aggcgatttc tttccacgcc attttcagat aatacagcat cgaccaaacc gtcagcaaag
    10561 atgcgataaa catcaatatg ttgccgataa caacaagatt aaatccgtaa aaatcgggaa
    10621 tattcagcag cagcaggaaa attgccagca tttgcgcggc ggttttaaac ttaccgacgg
    10681 tggcgacggc aacgctgttc cttttgccca tttgcgccat ccattcgcgc aatgcggaaa
    10741 tggtaatttc cctgccgatg atgatcatgg caaacaaaac ataggtccgg tcgagtttga
    10801 ccagtaaaag tagcgatacg gcaaccatca gcttgtcggc gacaggatcg aggaaggcgc
    10861 cgaaatcgga agtctgtttc cacagtcttg ccaaaaatcc gtcaaaccag tcggttaagg
    10921 cggcaacggc aaaaataacg gcggcggcga gattaatcgt ttcctccgcg aaccacggaa
    10981 aaggcaggta aaaaagggct gtcatgacag gaatgagcaa gaccctcaac catgtgagga
    11041 agatggggag attccaaggc atcggttttc tctgtgcaga ctgtaaagtt gtgattataa
    11101 cggttatcct cataacccaa aacgtaaaat tgctgcatgg gcattccccc gccccgccaa
    11161 tctgttttca cattcttttc aaacgcagga aaatggcggg caataaaagc aaaataccca
    11221 gtttcaggct gaaaacggca ggttgtgcca acacttcgac aaggcggtct tccgtgcggg
    11281 caaaatcttt attgcttata gacactgcca ctgttgcggt attccaacag aacgccgttt
    11341 aaaaaacctt tgccgacggt ttcgcttaaa acggctctaa cctgctccgc cctgatggtt
    11401 ctgccgatat tgccgcctgt gcacaaactg tcgaacccat agcaggaaag ccggtaatgc
    11461 tgcccgtctg catccagttt gattgcccgt ccgctgcggt tgggggcggt aacggtcaat
    11521 tccgcatatt cgaatgtttt ttcttgttcg tgaaatgccg tcaggtaagg tgcaataaaa
    11581 acggcggaca acagcagaca gcttatggcg gcaaaccata cccagcgata atatagtgga
    11641 ttaaatttaa accagtacag cgttgcctcg ccttgccgta ctatttgtac tgtctgcggc
    11701 ttcgtcgcct tgtcctgatt tttgttaatc cactatattt cacgcttacc ccttgtttct
    11761 caaatgccgt ctgaaataag cggcttaata tattgtttac agtattggga agcataacag
    11821 acaaaatgcc gtctgaaata ttttcagacg gcatttctta tccgaaacgg attatttttg
    11881 cgtttcaacc gcttccaatg cacgcagggc gtaagtgtaa gcggcaccgg cattcagggc
    11941 gatggcggtt gccaatgcgc ctgcgatttc gctgtcggtc gcaccggctt tggcggcagc
    12001 ggcggcgtga acgctgatgc agctctcgca acgagtggta atggcaacgg cgatggcaat
    12061 cagttcgcgc gttttggcat caagtgcttc ggcggcggcg gcctgttcca atgcgccgta
    12121 ggcctgcagc attttaggat gcgccttacc cagctcgccg aacgattttt taaccaatgc
    12181 ggtatgttct ttccaatctt taaacatttt cttttccttt ctcttgcgtt taaccctgat
    12241 acgcgcttgc gtatctgttt tcgatgtgcg tattattgca attattcagt tgtgtttctc
    12301 gtttaatcat ctcattttat ggttcaaaaa gatttatgga cattctggac aaactggtcg
    12361 atttcgccca attgacgggc agtgtggatg tgcagtgcct tttgggcgga caatggtcgg
    12421 tacggcatga aaccttgcaa cgcgaaggat tggtacacat tgttacatcg ggcagcggct
    12481 atctctgcat cgacggcgaa acttccccgc gtccggtcag tacaggggat attgtatttt
    12541 tcccgcgcgg cttgggtcat gtgttgagcc acgacggaaa atgcggagaa agtttacaac
    12601 cggatatgcg gcagcacggt gcgtttacgg tcaagcagtg cggcaacgga caggatatga
    12661 gcctgttttg cgcccgtttc cgctacgaca cccacgccga tttgatgaac gggctgcctg
    12721 aaaccgtttt tctgaacatt gcccatccga gtttacagta tgtggtttca atgctgcaac
    12781 tggaaagcaa aaaacctttg acggggacgg tttccatggt caacgcattg tcgtccgtcc
    12841 tgctggtgct tatcctgcgc gcctatctcg aacaggataa ggatgtcgaa ctctcgggcg
    12901 tattgaaagg ttggcaggac aaacgtttgg gacatttaat ccaaaaggtg atagacaaac
    12961 cggaagacga atggaatgtc gacaaaatgg tggcggctgc caatatgtcg cgcgcgcaac
    13021 tgatgcgccg tttcaaaagc cgggtcggac tcagcccgca cgcctttgtg aaccatatcc
    13081 gcctgcaaaa aggcgcgttg ctgctgaaaa aaaacccgga ttcggttttg tcggtcgcac
    13141 tgtcggtagg ctttcagtcg gaaacgcact tcggcaaggc gttcaaacgg caatatcacg
    13201 tttcgccggg tcaataccgg aaagaaggcg ggcaaaaata aatcggggct tcaaacgcaa
    13261 atgccgtctg aaaaggcttt catacagcat ttgcgtaccg cgtcatttca agggctgcat
    13321 cttcatcact tccatcaaaa agttggtaaa tgcggggttg ttgggtttga catccatatt
    13381 tttccaacgc tgctgccagc cgcgcaaggc attctggata tacagcttgg actgttccgt
    13441 attgattgcg ccccgctggc tgtctatcgc cgaacgcagg tagatttcat acatactgtc
    13501 atcgacggca ttgcgtccga ccaggcgttt tctgaagttg ttcagatatt gcgccgcctg
    13561 aaccttggtc attttaccga tacccacctg atagcccaag cgcgtcgctt catcgctgat
    13621 tttggcaaca tccgtccaat gcgaagaggc aaggcggaaa ccttttgcag gtgcttccgt
    13681 tttgacggta ttgataggat tcacggggat ttccgtcaat gtgggcacat aaatagactg
    13741 gcagccggaa agaactgcca caatggaaag agggataagg tattttttca tgcccccatt
    13801 ataatcaagt ttgccttgag aaaacaaatt gttcggcaag aaaaataaaa tttcggcatc
    13861 agaagcaggc aaaaacacat tccacaagcc ttgccgcaag gtttacaatc cgaccgtcct
    13921 tatcgcaacg accgtttatg gataccgcaa aaaaagacat tttaggatcg ggctggatgc
    13981 tggtggcggc ggcctgcttt accattatga acgtattgat taaagaggca tcggcaaaat
    14041 ttgccctcgg cagcggcgaa ttggtctttt ggcgcatgct gttttcaacc gttgcgctcg
    14101 gggctgccgc cgtattgcgt cgggacacct tccgcacgcc ccattggaaa aaccacttaa
    14161 accgcagtat ggtcgggacg ggggcgatgc tgctgctgtt ttacgcggta acgcatctgc
    14221 ctttggccac cggcgttacc ctgagttaca cctcgtcgat ttttttggcg gtattttcct
    14281 tcctgatttt gaaagaacgg atttccgttt acacgcaggc ggtgctgctc cttggttttg
    14341 ccggcgtggt attgctgctt aatccctcgt tccgcagcgg tcaggaaacg gcggcactcg
    14401 ccgggctggc gggcggcgcg atgtccggct gggcgtattt gaaagtgcgc gaactgtctt
    14461 tggcgggcga acccggctgg cgcgtcgtgt tttacctttc cgtgacaggt gtggcgatgt
    14521 cgtcggtttg ggcgacgctg accggctggc acaccctgtc ctttccatcg gcagtttatc
    14581 tgtcgtgcat cggcgtgtcc gcgctgattg cccaactgtc gatgacgcgc gcctacaaag
    14641 tcggcgacaa attcacggtt gcctcgcttt cctatatgac cgtcgttttt tccgccctgt
    14701 ctgccgcatt ttttctgggc gaagagcttt tctggcagga aatactcggt atgtgcatca
    14761 tcatcctcag cggtattttg agcagcatcc gccccactgc cttcaaacag cggctgcaat
    14821 ccctgttccg ccaaagataa aaaatgccgt ccgaacatcc ttcagacggc atatcgggct
    14881 ttatttcccc gccttcacat cctgccactg gcgcaccata aacttcaatg ccgccggctg
    14941 gataggcacc atgataaagc tgtttttcaa atcctcctcg gttgggaaaa tcgtattgtc
    15001 gtttttaaat tcgtcttcca tcagctcacg cgccggcttg ctcgaaggcg cataagtaac
    15061 gaaattgccg tttttcgccg acacttccgg gtcgaggaag tcgttgatgt atttgtgcgc
    15121 gttggcgacg tttttcgcat ctttcggaat cacgaaagaa tccacccaaa tccccacgcc
    15181 ctctttgggc atcatcacgc ggattttttc cttgccgccc gcttcttcgg cacggcgttt
    15241 ggcgatgttc aaatcgccgc cgaaaccgat tgttacgcag gtatcgccgc gcgccaaatc
    15301 atcgataaag ccggacgaag tgaagcgttt gatattggtg cggtttttct tgagcagggc
    15361 ggttgcctcc ctgatgtctt ccgtattgct gctgttcggg tttttaccca aatagttcaa
    15421 caccatagga tagatttccg ccgcactgtc caaatagctg atgccgcatt gcttgagttt
    15481 ggacgtgtat tcggggtcga acaccaaatc ccactggttg tccggcagct tgtccgtacc
    15541 caaagccttt ttcacgcgtt cggtattgat ggcgaaggta tttgtccccc aataaaacgg
    15601 cacggcgtat tcgtggccgg gatcgacccc gtccatcagc ctcatcattt cggggttgag
    15661 gtgtttataa ttgggaatca gcgacttatc gattttctga tacgcacctg ccttaatctg
    15721 cctgcccaca aacgcattgg acggcgcgac aatgtcgtaa ccggacttgc ctgtcagcac
    15781 cttgctttcc agcgtttcat cgctgtcgta cacatcataa gtaaccttga tgccgttttt
    15841 cttttcaaaa tcggcaacgg tttccggatc gacatattcc gaccagttgt aaattttcaa
    15901 tacgtttcgg ttttccgccg atgtcggatt ttcggcagat ggtttgtccg aaccgccgca
    15961 cgctgcaagc agcaaagcag tcaggacggc gagtggcaga tgtttggcca ttatcattcc
    16021 ttgcatatcg ggttggagaa agcggtcatt atagccgata ttggcaacag ggcttcagac
    16081 ggcattcaaa atcccgccac acccttccga aaaccgccgc ttccatagct agaaacaggg
    16141 atttgcggta agataccgcc gttcgttttc cctgctttta ccatgacaag acatttgaga
    16201 gacattgaaa aaattatgaa aacctccgaa ctgcgccaaa aattcctaaa attttttgaa
    16261 accaaaggcc acaccgtcgt ccgctcttcc agcctcgtgc cgcacgacga cccgaccctg
    16321 ttgtttacca acgcaggcat gaaccagttt aaagacgtat ttttaggttt cgacaaacgc
    16381 ccgtacagcc gcgccaccac cgcgcaaaaa tgcgtacgcg caggcggcaa gcacaacgac
    16441 ctggaaaacg tcggctacac cgcccgccac cacaccttct ttgaaatgat gggcaacttc
    16501 tccttcggcg actacttcaa acgcgacgcc atccacttcg cttgggaatt tctgacttcc
    16561 cccgaatggc tcaacatccc taaagacaaa ctgttggcga ccgtttacgc ggaagacgac
    16621 gaagcctaca acatctggtt gaacgaaatc ggtatgccgt ccgagcgcat cgtccgcatc
    16681 ggcgacaaca aaggcgcgaa atacgcgtcc gacaacttct ggcaaatggg cgacaccggc
    16741 ccttgcggcc cctgctccga aattttctac gaccacggcg aagaaatttg gggcggcatt
    16801 cccggcagcc ccgaagaaga cggcgaccgc tggatcgaaa tttggaactg cgtattcatg
    16861 cagttcaacc gcgacgaaca aggcaatatg aatccgctgc ccaagccgtc cgtcgatacc
    16921 ggcatgggct tggaacgcat ggccgccgtc atgcagcatg ttcacagcaa ctacgaaatc
    16981 gacttgttcc aagacctgct caaagccgtt gcccgcgaaa ccggcgcgcc gttcagtatg
    17041 gaagaaccca gcctgaaagt catcgccgac cacatccgct cctgctcatt cctgattgca
    17101 gacggcgtat tgccttccaa cgaaggacgc ggctacgtat tgcgccgcat tatccgccgc
    17161 gccgtgcgcc acggttacaa actgggtcaa agcaaaccgt tcttccacaa actcgttacc
    17221 gatttggtca aagagatggg cgatgcctac cctgaattga aagaaaaaca ggcgcaaatc
    17281 gaagaagcgt tgaaaaacga agaaagccgt tttgcccaaa ctttggaaac cggtatggct
    17341 ttgttggaaa atgcactggc caaaggcggc aaaacactcg acggcgaaat cattttcaaa
    17401 ctctacgata cctacggttt cccatacgac ttgaccgccg acatctgccg cgaacgcaat
    17461 atcgagctgg atgaagcagg cttcgagcgc gaaatggaag cccaacgcgc acgcgcacgc
    17521 gccgcccaaa gcttcaaagc caacgcccaa ctgccttacg atggtcaaga caccgagttt
    17581 aaaggttata gcgaacgcca aaccgaatcc aaagtcctcg ccctctacaa agacggcgag
    17641 caagtcgacg aattgaacga aggcgacagc ggcgcagtcg tcatcgactt taccccgttc
    17701 tatgcagaat ccggcggcca agtcggcgac gtcggctata tcttctcagg cgaaaaccgc
    17761 tttgaagtac gcgataccca aaaaatcaaa gcggccgtat tcggtcaatt cggcgtacaa
    17821 acatcaggcc gtctgaaagt cggcgacagc gttaccgcca aagtggacga cgaaatccgc
    17881 aatgccaata tgcgcaacca cagcgcgacc cacctgatgc acaaagccct gcgcgatgta
    17941 ttgggcggac acgtcgaaca aaaaggctct ttggttaccg ccgaatccac ccgtttcgac
    18001 atttcccatc cccaagcggt aactgccgaa gaaatcgccg aagtagaacg ccgagtcaac
    18061 gaagccatct tggcgaacgt tgccgtcaac gccgccatta tgagcatgga agatgcacaa
    18121 aaaaccggcg cgatgatgct tttcggcgaa aaatacggcg acgaagtgcg cgtactgcaa
    18181 atgggcggtt tctcaaccga attgtgcggc ggcacgcacg tttcacgcac cggcgacatc
    18241 ggcctcttca aaatcatcag cgaaggcggt attgccgcag gcgtgcgccg tatcgaagcc
    18301 atcaccggcc tgaacgcact caaatgggcg caagagcaag agcgtttggt gaaagacatc
    18361 attgctgaaa ccaaagccca aaccgaaaaa gacgtactgg cgaaaatcca agcaggcgcg
    18421 gcacacgcca aagccttgga aaaagagttg gcaaaagcca aagccgaact cgccgtccac
    18481 gcaggcgcaa aactcttgga cgacgcaaaa gacttgggcg cagccaaact cgttgctgcc
    18541 caaatcgaag ccgacgcagc cgccctgcgc gaaatcgtta ccgatttaac cggtaaatcc
    18601 gacaacgccg tgattctttt agcggcagta aacgacggca aagtctccct gtgcgccggc
    18661 gtatccaaac cgttgaccgg caaagtgaaa gcaggcgatc tggttaaatt tgcagccgaa
    18721 caagtcggcg gcaaaggagg cggccgtccc gacttggcgc aggccggcgg cacagatgcc
    18781 ggcaaattgc ccgaaatgct ggtaagcgtg gaaagctggc tttgtcagaa attaagttaa
    18841 atttaaatct taataagcca tttgagtctt gttcaaatgg cttatatttt ggattgttag
    18901 aatgaatact aaaacagagt tacaaaaact tttagaagag gatatatcaa ctttaacaga
    18961 aacactaatt tgtgcagatg ctcttcctcc aagatatgta cgtagcattg caactcctat
    19021 tgtccgtcga tggttaattg acaaacaatt aaatattctc gcaaaagaaa taggtttaac
    19081 tatagaattg cccatccttg atacaagttt ggtatttgaa aaattgtcaa ccttagagaa
    19141 taaagttaat ttttatatgg ctggtggagt ttatttaggc ggagaattta ttagctctat
    19201 atatcattca tcacaagaat tttctggtga accaataatc tatgctgaac caaatataat
    19261 tttatgtcct gctgaaaaat ttttaacttt aaaacgagtt ttccataatg gaaatatttt
    19321 taatatgaat cagataatta cttttttatc caataaacaa ggaggagtac attttgataa
    19381 aaattacgat aaatataaaa cttggcaagt tgctatagaa aaagcagcaa attttttaaa
    19441 actcggtaat ccatataatg aagataaatt atctcttagt gaagaacatg atactatttt
    19501 agtagtttta ccattagaaa aaggatatga atggaattgt cttgagatag aagtactatc
    19561 cgctgctcaa tctctagcaa atatctattg caacaaagtt cgcctcatag atggtcatgt
    19621 ttggaaggaa taaaagaaaa agcatagttg gtaattttta gttacgtagg gtgggcttca
    19681 gcccaccgtt ttttcatttt tgattgttga ttggtgggct aaagcccacc ctacggttac
    19741 taaaatcccg tcattacctc gcaggtggga atccggtttg ttcggtttcg gttttttagg
    19801 gacagtgccg caacattaaa tttccagatt cccactttcg cacaaataac agcgcaaata
    19861 gggcaaagat aaggatatgg gtttttttct ttgaatttac tatacaattc gcccgtcccc
    19921 gttatagaaa cccaagccga tgaaaaccct gctccaactc caaaccgccg cacaaaactt
    19981 cgccgcctac tacaaagacc aaaccgacga acgccgcgag aaagacacct tctagaacga
    20041 atttttcgcc attttcggca tcgaccgcaa aaacgtcgcc cacttcgaat accccgtcaa
    20101 agaccctgcc gacaacaccc aattcgtcga tatattttgg gaaggcatct tccttgccga
    20161 acacaaatcc gccaacaaaa acctgaccaa ggccaaagag caggcggagc gttatttgca
    20221 ggaaatcggg cgcaccaagc cctctgcgct gcccgaatat tacgccgtca gcgattttgc
    20281 ccatttccac ctttatcgcc gcgtacctga agaaggcgtg gaaaaccaat ggcagttccc
    20341 tttggaagca ttgcccgaat acatcacgcg cggcgttttc gacttcatgt tcggcatcga
    20401 agccaaagtc cgccaaattc aagaagaagc cgatattcaa gcggcggcgg ccatcggcag
    20461 gctgcacgac gcgctcaaag aagaaggcat ttacgaagaa cacgagctgc gcctcttcat
    20521 cacgcgcctg cttttcctct tttttgccga cgacagcgcc gttttccagc gcaactatct
    20581 ctttcaagac tttttagaaa gctgcaaaga aaccgacacg ctcggcgaca agctcaacca
    20641 actctttgaa ttcctcaaca cacccgacca aaagcgcagc aagacccaaa gcgaaaaatt
    20701 taaaggtttc gaatacgtca acggcggcct gtttaaagaa cgcctgcgca ccttcgactt
    20761 caccgccaag cagcaccgcg ccttaatcga ctgcggcaat ttcgactggc gcaac
//
LOCUS       DAWGBY010000021        20608 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.021, whole genome shotgun sequence.
ACCESSION   DAWGBY010000021 DAWGBY010000000
VERSION     DAWGBY010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20608
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.021"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(64..240)
                     /locus_tag="WHG62_000709"
     CDS             complement(64..240)
                     /locus_tag="WHG62_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724855.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVSAR"
     gene            complement(243..1601)
                     /locus_tag="WHG62_000710"
     CDS             complement(243..1601)
                     /locus_tag="WHG62_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ1724856.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1726..3373)
                     /locus_tag="WHG62_000711"
                     /pseudo
     CDS             complement(1726..3373)
                     /locus_tag="WHG62_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
     gene            complement(3396..4874)
                     /locus_tag="WHG62_000712"
     CDS             complement(3396..4874)
                     /locus_tag="WHG62_000712"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ1724857.1"
                     /translation="MFSKLTPLAETNIPSLLCENAAGRLLHSDSRQIKQGDIFIACPG
                     EYADGRSYIPTAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIIGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRRQGATAAAMEVSSHGLDQSRVNGVPFCSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLQHAVINVDDGYGAELIGRLKKDCPDLAVYSYGFSEQADIRITDF
                     TASSDGIAAVFQTPWGEGKCRTRLLGRFNAQNLSACIALLCANGYPLDKVLDVLEKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4899..6647)
                     /locus_tag="WHG62_000713"
     CDS             complement(4899..6647)
                     /locus_tag="WHG62_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ1724858.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKASTARQVRELMVSVTEPGGTGTAGAVDGFDVGAKTGTARKLVNGR
                     YVDYKHVATFIGFAPAKNPRVIVAVTIDEPTANGYYGGVVTGPVFKQVMGGSLNILGV
                     SPTKPLTNVAAVKTPS"
     gene            complement(6708..6971)
                     /gene="ftsL"
                     /locus_tag="WHG62_000714"
     CDS             complement(6708..6971)
                     /gene="ftsL"
                     /locus_tag="WHG62_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ1724859.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVEHQR"
     gene            complement(6968..7954)
                     /gene="rsmH"
                     /locus_tag="WHG62_000715"
     CDS             complement(6968..7954)
                     /gene="rsmH"
                     /locus_tag="WHG62_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ1724860.1"
                     /translation="MSGAESYRHITVLLNEAVDALVVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PELPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGPIPEQSQRKTSEWQ"
     gene            complement(7951..8406)
                     /gene="mraZ"
                     /locus_tag="WHG62_000716"
     CDS             complement(7951..8406)
                     /gene="mraZ"
                     /locus_tag="WHG62_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ1724861.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8685..9902
                     /locus_tag="WHG62_000717"
     CDS             8685..9902
                     /locus_tag="WHG62_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ1724862.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTLIMPLLIPSPEARQSSLKLQTLI
                     AEEIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTY
                     SARPLHDLQLSALTSLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLIGYL
                     PQSHFLLNLGITELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVD
                     WAGFRFGDICHKL"
     gene            10034..10110
                     /locus_tag="WHG62_000718"
     tRNA            10034..10110
                     /locus_tag="WHG62_000718"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10068..10070,aa:Met,seq:cat)
     gene            10118..10193
                     /locus_tag="WHG62_000719"
     tRNA            10118..10193
                     /locus_tag="WHG62_000719"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10151..10153,aa:Ala,seq:ggc)
     gene            complement(10380..11201)
                     /locus_tag="WHG62_000720"
     CDS             complement(10380..11201)
                     /locus_tag="WHG62_000720"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ1724863.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEITIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIVDVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11234..11878)
                     /locus_tag="WHG62_000721"
     CDS             complement(11234..11878)
                     /locus_tag="WHG62_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ1724864.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVKLSGL
                     KYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
                     LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11881..12744)
                     /gene="ftsN"
                     /locus_tag="WHG62_000722"
     CDS             complement(11881..12744)
                     /gene="ftsN"
                     /locus_tag="WHG62_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ1724865.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKQPVADKA
                     DEVEEKADEPEREKSDGQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTPDKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHE
                     VASLIRSIESK"
     gene            complement(12850..14346)
                     /locus_tag="WHG62_000723"
     CDS             complement(12850..14346)
                     /locus_tag="WHG62_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ1724866.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GGLMEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14360..14680)
                     /locus_tag="WHG62_000724"
     CDS             complement(14360..14680)
                     /locus_tag="WHG62_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ1724867.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15163..16689
                     /gene="putP"
                     /locus_tag="WHG62_000725"
     CDS             15163..16689
                     /gene="putP"
                     /locus_tag="WHG62_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ1724868.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRATR
                     "
     gene            16940..20545
                     /gene="putA"
                     /locus_tag="WHG62_000726"
     CDS             16940..20545
                     /gene="putA"
                     /locus_tag="WHG62_000726"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ1724869.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADKLDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4849 a         5972 c         5004 g         4783 t
ORIGIN      
        1 tcgggcctgc gcccgtttga ggttggcttg ccgcccggca aggtttcgga cggcttttgc
       61 agattaacgt gcagagactt tcccaatcac gcaaatcggg taactccccg gatttttgcc
      121 gccacccaag tctaaacata aatcttcata aagatacgcc tgcgtctgca ttccggcata
      181 aaacgcgccg accagcgcgg caatcaacaa taaggcttta aaaaaacgtc gacttttcat
      241 tttcacttat cctccaatgc ctcgaccact tcttccatct gcataaagcg cgaacctttc
      301 accaacacgg tggcgcgttc gggcaaatcg tggcgcaaca cttgaatcaa cgggtctttg
      361 gcggcgaacc acaaaccgtc cgcgccaaat ttttccgccg cttcgacgct gttgtcgccg
      421 acaaaataag ccgcttcgat gccttggtcg cgagcatacg cgccgacttc ggcgtgcatg
      481 gcggcggctt cgtcctcacc cagttcgccc atatcgccca tcacgaaaat acgcggcgca
      541 ggcatacgcg ccaacacgtc aatcgcggct ttcatgctgt cagggttcgc attataagta
      601 tcgtcaatca gggttgcgcc cttgattccg gatttgacgt tcagacggcc tttgatattg
      661 ctgaagcctt tcaaaccttc cgccacatcg ttcaaactca aacctgcagc caaagacagc
      721 gcggcggcag cggcggcgtt gtggacattg tggcggccgg gaacaggcag caccacggcg
      781 gcgcgttcgt cgccgcacac caaatcaaat tcgcacgaca acggtttcag cacgatattt
      841 tccgcgtgga catcgccgct atcgatgccg aaagtgcgcg tattcaaatt aagcgttgcc
      901 gttttgaaga cagccatatt ggcatcttct tgaggaatca gtgccatgcc gtctgaacat
      961 aagccttgat aaatctcgct tttcgctttg gcaatatcgc ccactccgtc gaaaccgcag
     1021 ccgacatggg cgcgcatggc gttgttgacc aatgcggcat cgggtttggc gatttgtgtc
     1081 aaaaccgcca gttcgccaaa atggttcata cccatttcaa tcacggcata gcggtgtttt
     1141 tcgtttaatt tcaacaaagt caacggcaat ccgatgtggt tgttgaagtt gcctgccgtc
     1201 gccaaaacgg cattatcgcc gaaacggcgg cgcaataccg cagccagcat ctccttcacc
     1261 gtcgtcttgc cgaccgaacc ggtaatgccg aacacaaacg gattcacatt ttcacgccac
     1321 acctttgcca acgtttgcaa tgcggcaagc gtgtcatcga ctttcaacgc gccatccatt
     1381 gcaacgcaat cttcgcgcga aaccacaacc gccgccgcac cagcagccaa tacgtcttca
     1441 acaaaatcat gcgcatcaaa ccgcccgccc gccaatgcga aaaacacatc gcccgcgcgg
     1501 atgtcgcggc tgtcggttac gatgcgcgac acgggtttgc tttcagacgg catcggaagc
     1561 ttgagggctt ggcagatgaa atttaggtcc agtggtttca tatttacttt cgttaatatt
     1621 cgggcggcgg acacatcggt agcggctgat ttttttatcg cctgttttgc tgtggtaaaa
     1681 cacagattat tttcccattc tcattcggca ttttttctgt acgtatcatt ttttagacgt
     1741 atttttagtc gatttgcctt ttcccgcata ccacggcgcg gggtcgtcgg gcagtccgtc
     1801 gataaaggca aggttattgc cttcgcccgg cacatcggga acattccccc aaaaatcata
     1861 gccgtcatcg ggcaactcgt cggtttcgat acccgtccaa ctgccgaatc cgcgtaaaaa
     1921 attaaacgcg ctgcgcctca ctttaatcat ttcgcgccgc gtgtcatcgg acgaaatttt
     1981 aaccagcggc acgccgtagc tttgacgctt ccacgcacca tgtgtcaacg ttcgctcgcc
     2041 gcctttaccg acatgcatca aaccgtggtc ggaaaagtaa accaaagacc agctttcttt
     2101 attttcattc aatatcttaa ctgtatcttc taaaaattta tcggtttgcg cgatggtgga
     2161 aacatagcag gatatttttt cagtttgata ctgaaaccgc cgcgcatcct tatccaaacg
     2221 tgtgcaaaaa tcactgtgcg aacccatcag gtgcatcaca atcagccgag gcttcgtgcc
     2281 tgcatttcct atcaaaaccc gtttgaacgc cggcaacaaa aggcggtcgc tcaaccccgc
     2341 gcttttgcca taatcacccc tttgggtaaa ccacggataa tcgctgcgta gggcataggt
     2401 ggaaatttcg ttggcaaaat gccccaacat tccttgatta gacagccacg ccgtccgaaa
     2461 acccgcctgc ttcgccaagc tgacgatgtt attgttcggt tctcccggca gccccaaagt
     2521 ctgcggcagc gaaagattcg tcgcgtgggc ggtcgattgg taaccgttta tcaacagccc
     2581 tttggtctga ctcaaaaaag gcgtatcggg caatgggaaa ccgtaaacat tcatataatc
     2641 cgaacgcgcg ctctcatcga taaccacaac ataattttta tacttgggcg caacatgacg
     2701 gatatgccat gttgacgctt tttttgctgc ttccaaaatg tgggcgcgct tggcggcata
     2761 ttgtgccggc gcggaagcca aatcgtaata caggtcgaaa atattcaaca acaggccggc
     2821 atcaggttct cgcaaatctt tatcgctggc gattttatcc atcaccgcgc aggacaaaat
     2881 caaagtcaat aatatagtca gccatatttt gctgcggcgt ttatagtttt ttacgtcagc
     2941 aaataccccc ccccgataca caatatctcc aaactgtcaa gccaaaaatg aaaaataatg
     3001 cctgcacaaa ataaagcgac ccgggaagat tgccgacaaa ttcacgcgcc tcggcaggat
     3061 tgctttccaa tatcgaaccg actatctgat aagacggcgc accatacagc cagccgaccg
     3121 gcaaatatag ggcggttgtg ccgacgtaaa tcagtaaaac aactgaagaa acgcgcggga
     3181 aaccgcgtgc caataataat aaaaatacaa ccgaagccaa agcacccacg gcagaataac
     3241 ggtagccgta ttcatattcc aagtgataac ctgatgcgat ggccgcgcca aaacaaaagg
     3301 ctaaaagcgc gcaaatgccc aatgtatttt ttaatgtctg atccatattt tttattcggg
     3361 cggattgttt catacgatgc cgtccgaata tcccattatt tacgagttaa caaagcctgt
     3421 ccgacgattt caagatcgga aaaacggtgc ttcacgcctt gtacatcctg atagttttca
     3481 tgccctttgc cggcaatcag gatgatgtcg tttgcggcgg cttgttcaac cgcataacgg
     3541 atggcggcgg cacggtcggc ttcgacgcat tcgggcgcgg gaacggcagg caggatgtcg
     3601 ttgatgatgt cgtgcggatt ttccaagcgc gggttgtcgc tggtgacgac gactttatcc
     3661 gcgccctgta cggctgccgc gcccatcagc gggcgtttgc cgcgatcgcg gttaccgccg
     3721 caaccgaata cgcaccacaa agccgcaccc tgcggtttga tttcctgcaa ggtggcgagt
     3781 gctttttcca atgcgtcggg cgtgtgggca taatcgacaa caaccaaagg tttgccgctg
     3841 ttcataatac aatccatacg gcctgaagca ggacggattt tttccagtac atccaatacc
     3901 ttatccagcg gatagccgtt ggcgcaaagc aaagcgatgc aggcggagag gttttgcgcg
     3961 ttgaaccgtc cgagcaggcg tgtgcggcat ttcccttcgc cccacggggt ttggaatacg
     4021 gctgctatgc cgtctgaaga ggcggtaaag tcggtaatgc ggatgtcggc ttgctcgctg
     4081 aatccgtagc tgtaaacggc caaatcgggg cagtcttttt tcagacggcc tatgagttct
     4141 gcgccgtatc cgtcatctac attgataacg gcgtgttgca ggccgtgcca gtaaaacagg
     4201 cgcgacttga tagcgccgta ggcttccatc gtgccgtggt agtcaaggtg gtcgcgtgtg
     4261 agattggtaa agattgcgct gcaaaacggc acaccgttga cgcgcgactg gtcaagcccg
     4321 tggctggaga cttccatcgc ggcggctgtt gcaccttgcc ggcggaaacg gtagagcagg
     4381 gtttggacat cgacgggggc gggggtggtg tgcgtggttt cttccaacgc gccccaaaag
     4441 ccgttgccga ccgtgccgat aatggcggtt ttttcgccca acaaatcggc ggcctgcgcc
     4501 agccattgcg taatggaggt tttgccgttg gtaccggtta cgccccagac tttgaggccg
     4561 tctgaaacgt tgccgtaaac ctgtgccgcc aatatgccgg cgcggtgttt caaatctttg
     4621 atgccttgat tggggacttt ccattcggga ttccacgcga atttgccgtc gtcgtcccaa
     4681 aaaacaaaag ccgcgccgtt ggcaacggcg gtggggatat aactgcggcc gtcggcatat
     4741 tcgcccggac aggcaatgaa aatatcgcct tgtttgattt gacggctgtc tgaatgcaac
     4801 aaacgccctg ctgcgttttc acacagcaga gacggaatgt tggtttcagc taaaggggtt
     4861 aacttgctga acataaaata atctcgttga tactcggatt aagacggtgt tttgacggct
     4921 gcaacattgg tcagaggttt ggtcggagaa acgcccaaga tgttcaggct accgcccata
     4981 acttgtttga agaccggacc tgtcactacg ccgccgtagt aaccgtttgc agtcggctcg
     5041 tcaatggtta ccgccacaat cacacgcgga tttttagccg gggcaaaacc gatgaaagtg
     5101 gcaacgtgtt tgtaatcgac gtaacgaccg ttaaccaact tacgcgccgt accggttttt
     5161 gcgccgacgt cgaaaccatc taccgcaccc gccgtacccg taccgccagg ttcggttaca
     5221 gaaaccatca actcacgcac ctgacgtgcg gtcgatgctt taaatatacg tttgccttgc
     5281 ggcgcaaccg cctgtttttc aaagctgacc ggcagcaaaa cgccgtcgtg cgtcagtgcg
     5341 gtataggcac gcgccaattg cagcaggctc aattgcaggc cgtaaccgaa agacatcgtc
     5401 gcctgttcga tgggccgcca cctgcgccaa tttctcaaca aacctgcagt ttcgcccgga
     5461 aagcccgagt gcatacgcac accgatgccc aactcatgat agaagtcata catttcttcg
     5521 gcaccgaaac gcgcagacag tttgcttgtg ccgacgttgg acgatttctg catgatgccg
     5581 cgcacatcca aagaggggta aacatgggta tcgcgcacgg gagacggtcc gattttataa
     5641 ggctgcgtat tcagccgttc gttcaaatcg gttttgcccg catccaatgc tttcgcaatc
     5701 acaaacggtt tgattgccga accgggttcg atcatatcgg ttacggcacg gttgcgcctc
     5761 tgttcgctgt ctgcccggcc gggcctgttg ggatcgtagg cgggcgtatt ggccaaggcg
     5821 aggatttccc ccgtgcgggc atccaaaacc accaccgttc cggcttttgc ctgatggtat
     5881 tcgaccgcct tgttcaactc ttcataggcc aaggtctgaa tcctctgatc gagggaaagg
     5941 atgatgtctt tgccgttttt cggggcttta ttgcgcgggg agtccaagct gtccacaata
     6001 ttgccctgcc ggtcccgcaa aacgacttcc gcgccgtctt cgccatgcag gctgtcttca
     6061 agcgaaagtt ccaaaccttc ctgacctttg ccgtcaatat cggtaaatcc gatgacgtgt
     6121 gcaaacaggt tgcccatcgg gtaatggcgt tttaattctt tttcaaatac aaagttttcc
     6181 aaacccaagg ctttgacctc ttcggcaacc ttgggatcga gctgccgctt aatccagata
     6241 aacgacttgc ctttctgttc gagcttgttc ctcaaaacat caaccggcac atcgacaagc
     6301 tcggacaggc gttccaattg tgcggcagac ggcatttcct tcatctcttt aggcacggca
     6361 aacagggact ccgtcggcgc gctcaacgcc aaaaccgcac cgttccggtc cgaaaccgta
     6421 ccgcgtgtag ccggcaatgt ttgagtccgc acaatccggt tgtcgccctg ttctttcaaa
     6481 aagttatacg ttaccgtctg cagatacagt ccgcgggcaa tcagaccggc aaacaagacc
     6541 gctattgcca tcaggacgaa gctgatccgt ccgttactgg tcatcggctt tttgacctgc
     6601 tcttctttgg gcagcatccg aggcttatat tcgctcttaa tcaacatttt tacttctcgt
     6661 tattattatc ctgacgcagg aatccgattc cggcacacag gctgcttcta tctttgatgc
     6721 tccaccataa aggtattgcc cgaaaccggc ggatggaggt tttgtttttc tgccgccgcc
     6781 ctgatcgctt cgtggttcgc caaacgcgcc tgttgcagcc tcatttgcgc ataatcctgc
     6841 tccaaggcga tttcctgttt tttcgcctta tccaaagctg tgaagttgag cctgtactgg
     6901 ttttgctgca tcacaacgga aaaagcggaa acgcacaccg caagcagcag aaggaaattc
     6961 aatttgttca ttgccattca gacgtttttc tctgtgattg ttccggtatc ggaccggcag
     7021 tccgctccgc cacacgcaaa accgcacttc tcgccctcgg attggcggca atttccgcct
     7081 cacccggctt taatgccctg cccacgattt tcaggggcag ctcgggcaaa tccgcttccc
     7141 tgaccgccgc ccagcgcggc aggggcgcgt gttgcgaata ttttttgaca aactgcttca
     7201 caatgcggtc ttccaacgaa tggaaagcaa tgaccgccaa acgtccgccc tctttcagac
     7261 gacacatgac ctgcggcaat actgccccta cttcttcaag ctcgcggtta ataaagatgc
     7321 ggaccgcctg gaaggtgcgc gtcgcaggat cctgcccccg ctcgcgagta cggacgtttt
     7381 gtgccacgat ctgcgccagc ttgcgggttg tatcgattgg actttccgcc cgttgcgcaa
     7441 caatggcgcg cgcaatctgg cggctaaacc gctcttcacc ataattcttg attacctcgt
     7501 gcaaatcctg ttccgacgca accgctatcc actctgcggc agacataccg cgcgtcgtat
     7561 ccatacgcat atccaaaggg gcatcgaaac ggaagctgaa accgcggctg ccgtcatcga
     7621 tttgcggaga cgaaatcccc aaatcaaaca gcgcaccgtc caccttgccg atacccaaac
     7681 cgtccaatgc cgtctgaaac gaagcaaaac cgccatgcac gacaccgacc cgtttgtccg
     7741 aacgcgccag ctcttctgcc acagcaatcg cctgcgggtc tttgtcgaaa acaatcaacc
     7801 gccccgcatc gcccaaacgc gacaaaatca gccgggaatg ccctcccctg ccgaacgtac
     7861 cgtccacata gacaccgtct tcgcgcacga caagcgcatc caccgcctca ttcagcaaga
     7921 ccgtgatatg ccggtaactt tctgctccac tcacaattgc aaatccgtct gacccaactg
     7981 gaaggcaagt tcgtcaggat cgtcatccaa agcctgaacc atctcagcct cccactgctc
     8041 gcgaccccaa agctccaaac ggttggcacg accgaccaaa acgacttcac ggtcgaaatc
     8101 cacccttttc ctcagtccgg caggaagcag cacccggccg gcgctgtccc attccaaaat
     8161 ttccgcgtta tgcagcaaaa gattttgaaa ccgccgcaaa acagggttat ccgccacttt
     8221 taagtttaaa agttgcgccg caaccttttc ccactccgca acagggtaca tcaacagctt
     8281 gtgtttcgac tcgagcgtta ccactacggc aggcgtatag aggcgcgaca gaatgtcacg
     8341 gaatttggca ggaacagcca accgcccctt actgtcgatg cttaattcgt gtgcgccgcc
     8401 gaacatgaca tgtcccaagc cgaaatcaaa atcacaaggg taaaagagac actttgcccc
     8461 acaattcccc accaatcgac actataagaa attttaaaca ctcggtcaaa tcagagcatg
     8521 aaaactcatt aacatatctg aaatttttat tccttttaaa aacaataaga taaaaaatgg
     8581 cgacaacggc acggcgggtg cggtacagag tgaccgaacc aataaacaac tatatatgat
     8641 taatttaata atataaacac aatatatagt attaagataa agccatgaca gcacccgtac
     8701 caacgtgtaa tatgtcggga aatccaataa atttacacaa gctaacactt atcatgcccc
     8761 tcctcatccc ctctcccgaa gcacggcaat cctcgctcaa actgcaaacc ctcattgccg
     8821 aagaaatcgg caaacacggc aactggattc cattttcacg ttttatggaa ttggttttat
     8881 acgctccgca atacggctac tacaccggcg gcagccataa aatcggcaat accggggatt
     8941 ttattaccgc accgaccctc acctctctgt ttgcacagac actggcacgc caacttcaag
     9001 aacttctatc ccaaaccgca ggcaatatct atgaattcgg cgcgggaacc ggacagcttg
     9061 ccgccgattt gttgggcagc atttcggacg gcatcagccg ttactatatt attgaaatat
     9121 cgccggagct agcagcacgt cagaaaaacc tgattcaagc acgcgcaccg gaagcatctc
     9181 aaaaagttgt ccacttgacc gcacttcccg aagcgtttga cggcatcatc atcggcaacg
     9241 aagtactcga tgccatgcct gtcgaaatcg tccgtaaaaa tgaaggcggc tcattcgagc
     9301 atgtcggcgt ttgcctagat aatgaccgtt ttacctattc ggcacgaccg ctgcacgact
     9361 tacagctatc tgccttgact tccctctatt ttcctcaaac agattatccc tacaccagcg
     9421 aactacatcc gcaacaatat gcctttatcc gcacccttgc ctcaaggctt gaacgcggag
     9481 gtatgatatt catcgactac ggttttgatg cggcgcagta ttaccaccct caacgcaatc
     9541 aaggtactct gatcggacac taccgacatc acgttatcca caatcctttt gacttcatcg
     9601 gattggccga cctgaccgcg catgtcaact ttaccgacat tgcccaagcc gggacggatg
     9661 ccggattaga tttgataggt taccttcccc aatcccattt cttattgaac ctgggcatta
     9721 ccgagctatt ggcacagacg gggaaaacgg attcggcagc ctatatccgt gaagccgccg
     9781 ctgttcaaaa actaatcgat caacatgaaa tgggagaatt gtttaaagtc atcgcattcg
     9841 gtaaaaatat cggcgtcgac tgggcaggat tccgcttcgg cgacatctgc cacaaactct
     9901 aaccctcatg ccgcctgaat ccgcttcaga cgacataaac tttttaacat ttaaaaacag
     9961 tcaactaatt caaaattaaa aaatacggct tgtcaaaaaa acagaaaaac atataatagc
    10021 gtcttcacga aacggcgaat tagctcagtc ggttagagca gaggaatcat aatccttgtg
    10081 tccggggttc gagtccctga ttcgccacca gatttttggg ggtatagctc agttggtaga
    10141 gcgcttgcat ggcatgcaag aggtcagcgg ttcgatcccg cttacctcca ccagataaaa
    10201 aagcacagac cgtaaaaagg tatgtgcttt tttattacct gattaccggc aaataaagaa
    10261 taaaccactg ccttcaaaac aggcaatcga ctttaaacct atcgccccgc ctgtcctgat
    10321 tttatcagcc cgccaaacaa acccggtccg aataatgtct tcaggccggg tttatggttt
    10381 cattcccaac ttatccagcc cgacaaccac aatattatga tgacaatgcc aaaaacaatg
    10441 cggtaatagg caaatgggat atagtttttc ttggagacaa acttcagcag tgctttgacc
    10501 gctaccaaac cggaaacaaa agcggcaata aagcctatca gaatcaaacc gacatcatgc
    10561 agggtgaaaa accggtaatg cttcaggaca tcataagccg ttgctgcaac catcatcgga
    10621 acggccaaga aaaatgaaaa ctccgttgcc gttttccgct cgattcccca aagcatcccg
    10681 cccataatcg tactgcccga acgggacgta cctggaacca gtgcaaacac ttgggcaacg
    10741 ccgatcatca acgcatcaat cggacgcaat gcatcaacat cgacaatttt aggctctgct
    10801 cggctttggc gtttctccac ccacaaaata aaaaaaccgc ccaaaaccag catgactgca
    10861 acactcaagg ggttaaacag atactctttg atttgtttgc cgaacaacag ccccatcacg
    10921 gcggcaggta taaaagcaat ggcaagatta aggacgaaac ggttggcttt ccggtctttt
    10981 cccacgccat gcaacacatt gctgaaacgc tgccggtatt caaacactac cgccaaaacc
    11041 gcaccgagct ggatggtaat ttcaaaaacc ttgtgattgc tgtgaaaatc aatcagattg
    11101 ccgaacacaa tcaaatgtcc ggtgctggaa atcggtaaaa attcggtaaa accttctacc
    11161 aagcccatca tcagggcttt caggacaatc agaaaatcca ttgcttgcgc ttctttcgga
    11221 tacgggagtt cggctatttc tgtacagcag gggtctgacg cttgcgttct tccctgactt
    11281 tggcaaccaa ttctttaatc gtatgaacac cgccgtcaaa gccattattg aagataacgc
    11341 ggtattttcc gccgacgaca acggtcggcg tactgtcgat gcggtactgt tccgtcaatt
    11401 gctgcatttt tgatgcagca gccgctgccg caggagagtc gtaggcgcgc atcagttttt
    11461 tgccgtcaaa gcctttttga gacaaagccc atttttcggc aaccgacctg ttttccaagc
    11521 ggattttttg ttcgtaaact gctttaaaca cggcagggtt tgcctgatat ttcaaacctg
    11581 acagcttgac cgcagcagcc attcttgcca gaccgagcat ttcaggctgc cagaccacgt
    11641 gctccgtcct taaataggca tcagacggca atgccttgcc caatttcaat aacaaaggat
    11701 cgaaatgatg gcaatgtacg cagaaatagc cgaaaaattc caaaacctca attttgcccg
    11761 actgtttttg aggaatgggt ttatccaaca caagatagtc ttccccttcc gtcagggcat
    11821 atgcctgcgc ggacaacact gccgacagca gcagcggcaa cagatgtttg agcttcataa
    11881 ttatttgctt tcgatagaac ggatcaggct ggcgacttca tgttttttca actcgtcctg
    11941 catttttttc accgcatcgg cagacatatt gccgctttgc acccggtaaa gcgttttatg
    12001 tcccgcctga taaccgacca ccttggaaga tatgcccaag attgccagtt tggcacgctg
    12061 cccttccgcg ctccggcggt cggcatacgc gcccatttgc agataatgcg ttgcttccgc
    12121 cttgtcgggc gttttcattt tctgcacttc tttggcagcg gcactgcgcg ctttttcgat
    12181 gctgccgctg ttgaggattt gttccggggt cggtttgggt gcaacttttt ccttctccgc
    12241 ctttttctct tcttttgaag cttttttctc tgtttcttta gatggtttta ccgcttgttt
    12301 tttaaccgtt tcggcatctt tcttctgcgc tttttccccg acggtttgtt cacgctcttc
    12361 cgtcagtgct ttcttgcgca ctgcctgtcc gtccgacttt tcccgctccg gctcgtccgc
    12421 cttttcctca acctcgtcgg ctttgtcggc aacgggctgc ttgtcggcag ctttttccgc
    12481 atccgactgc tctgcctctt tcgcagcatc cggttcggac aaggcgtttt gatcggccgg
    12541 ttcaggttgg atgtcttcct taggctggtt tttcggtttc aggatttccg tttctgcagg
    12601 ctgcttcgac ggaaccggga ttttgaacgc attttgaccg ctctggttca gataaaacaa
    12661 aataccggca ataatgaccg tcgccagtat caaaccgaag aaaaaaccgg acagaccttt
    12721 tccggattgg gaaaatttgt tcataaacat accttaatgt gtttcagacg gcattaacgc
    12781 cgtttgctta cgggcggata ttctaacaat atcgccatat ttgggcaaaa cctgcttcca
    12841 ttcccattcc tataaagcgc gacggaaacc tatggctttc atgacgtggc ttctgccgac
    12901 ttcttcgtcg cccgccaaat ccgccaatgt acgcgccacg cgcataatgc ggtggaagct
    12961 gcgggcggaa agggagagtt tttccatcag gccgcccaat gcttcctgcg cttctttttg
    13021 aatgcgggct tgggaatcga gttcgctgac gctcaaagcg gcgttgactt tgccctgccg
    13081 tgcgtattgt ttgtcgcggg cggcgataac gcgttccaaa acggacgcgc tgctttcgcc
    13141 cgcttcctgc tgcatcagtt cggcggcgga caggctgggg acttcgatgg tcaaatcgat
    13201 gcggtcgagc agcggcccgg aaatcttgct gcggtaacgc gcgacgcttt cgggcgtgca
    13261 gcggcagggt ttgacgggat gcccgagata accgcacggg caggggttca tggcggcaac
    13321 aagttggaat ttggcaggat agacggcttg gcgcgccgcg cgggaaatgt ggatttcgcc
    13381 gttttccaac ggttcgcgca aaacttccaa aactttgcgg tcaaactcgg gcagctcgtc
    13441 caaaaacaaa acgccgtggt gcgccaatga aatttcgccc ggacgcggat ccgaaccgcc
    13501 gccgaccata gccgccgcgc tggcgctgtg atgcggactg cggaaaggac ggttgctgtc
    13561 gagttgttgt tggtggttgg gcaggagcga acgcaatgcc caaacttcta ccaattcgtc
    13621 ttcggtcagc ggcggcagga tgccgggcag ccgttgggag agcatagact tgcccgttcc
    13681 cggcggaccc atcatcaaga ggctgtgtcc gcctgcggca gcgatttcca aagcaaggcg
    13741 cgcggtgtgc tgacctttca catcgcacaa atcaggttgt ccgccatgtt caaacggcat
    13801 ctgaggaact tggcattcgg tttgcgccaa aggttcgatg ccgttcaaat gggcggcgac
    13861 ttcgcccaaa gagcgcgcgc cgtaaacggt aatgccgcgc atcacggcgg cttgtcctgc
    13921 attttcttca ggcaaaacaa atgcacgttt tgcctgcata ccctgccacg ccatcgccaa
    13981 cgcgccacgc acggggcgca acagccccga cagtgccaat tcccccgcaa actcgtattc
    14041 cgccagtttt tcgggcgcaa cctgccccga tgcggcaagg atgccgattg caatcggcaa
    14101 atcgaaacgc cccgactctt tgggcaggtc ggcgggggcg aggttgacgg taattttttt
    14161 ggcggggaat tcaaaaccgc tttgaataat ggcggcacgg acgcggtcgc ggctttcctt
    14221 tacttccgta tcgggcagcc cgacgatgtt gaaatgcggc aggccgttgg caaggtgggc
    14281 ttccacttcg accaacggcg cattcatacc gctcaaggcg cggctgtaaa ccaaggcaag
    14341 cgacatattt cagacggcct tattcgccgg cttcggtttg ctgcctgatt tcggcgacgg
    14401 cttcttcggc agcggcttca gccgcttcca atgctgcccg ttcgggattt tgcgcggctt
    14461 cgagttttgc caaacgcgct tccaaagccg ccagtttggt acgagttttg attaaaacct
    14521 gctgctggat gtcgaattct tcgcgcgtaa ccagatccat acggttgaac gcgccgccca
    14581 gcatcgcctt aatatttttt tccacatctt tggcagggct gttggcgatg gtttcgctga
    14641 ttttcgaacc gacttcttca aaaagctgct tgccgaacat aatctgtatc cttcctgaac
    14701 atatcaaatt caatcggcta ttgtataagg aaaaatgccg tctgaaaacg ggcggcggat
    14761 aatcggcaaa acataccgcg cctcctttgc ggttgctaaa ttacacctca aaacacctgc
    14821 cgcctgaaaa cggatttcat attccgcgca acgcctgatt acaagacact acaaaacaat
    14881 atgctgtttt aaatgatttt tccgacgcgc atcgtttcaa actcggcttt ttaagccatt
    14941 aagtgctttg caaacaacag aaattgggtt atgctgaaac ggattattta caatttcata
    15001 tagttttatt acatatctta ttgtgattga agataattta tccgaatccc cctttcgggt
    15061 atccggattt tccgttgtac ttttattaga aaaacatttc aggcgcaagt tgcttgcaat
    15121 ttcaaagcct gtaattctga agttttagac gaggaatagc acatgaatcc catgtacatt
    15181 acttttgcaa tctatctggt tgcagtcctt ctcatcgggc ttgccgccta tttttccacg
    15241 cgcaatttcg acgattatat tttgggcggg cgcagcctag gcccgtttgt taccgcgatg
    15301 tcggcaggcg cgtccgatat gtccggctgg ctgctgatgg gtctgccggg cgcgatttat
    15361 ttgagcggtt tgaatgaggc ttggattgcc atcggcctct tggtcggcgc gtatttcaac
    15421 tggctcttgg tggcgggccg cctgcgcgtg cataccgaat acgccaacaa tgcgctgacg
    15481 ctgccggatt atttcttcca ccgcttcggc gcgggcggac acttgatgaa agtggtttcc
    15541 gcactgatta tcctgttctt cttcacgatt tattgcgcct cgggcattgt ggcgggcgca
    15601 accctgttcc aaagcctgtt tgaaggtatg acttacaatc aggcaatgtg gctgggcgcg
    15661 ggcgcgacca tcgcctatac cttcttgggc ggtttcttgg cggtcagctg gacggatacg
    15721 ctgcaggctt ctttgatgat tttcgccctg attttaacgc cggtgatggt ctatctgggc
    15781 ttgggcggcg cggaacagat gtctgccgcg attcaaagcg tcgccgcagg cacgggcaaa
    15841 gaatacggca gcctgtttgc cggtacgacc gtcatcggca tcatttccac cgccgcatgg
    15901 ggcttgggct atttcggaca gccgcacatt ttggcgcgct ttatggcggc cgaaagcgcg
    15961 aaatcgctgg tatccgcacg ccgcatcggc atgacttgga tggcgttgtg ccttgcgggc
    16021 gcggtggcgg tcggttattt cggcattgcg tatttcggtg caaatcccga caaagtttct
    16081 tctatgagcg gcaaccacga acgcatcttc atcgcgcttt ccaccctgct gttcaaccct
    16141 tggatcgccg gcatcatttt gagcgcgatt ttggcggcgg tgatgtccac cctgtcctgc
    16201 cagcttttgg tttgctccag cgcgattacc gaagacttct acaaaggctt tttgcgtaaa
    16261 aacgcgcaac agtcggaatt ggtatgggtc ggccgcctga tggtcttggc gattgccgtg
    16321 atttccatcc tgattgcttc cgatccgaac agcaaagtat tgggactggt ttcttatgcg
    16381 tgggcaggtt tcggtgcggc attcggcccg attgtgattc tgtccgtatt gtggaaacgc
    16441 atcactgcct acggcgcgtt gtcgggtatg gttgcaggtg ccttaaccgt agtcgtatgg
    16501 gcggaatggg taaaaaaacc ggctcaagcg gcaggcgaaa gcggcctgct gaccatgtac
    16561 gaaatcgtcc cgggctttat tgtttgcttg atcgttgccg tattggtttc cctgttcaac
    16621 aaagaacctt cgcgcgaaac ccaagaacgc tttgaaaaag ccgacgcaga ctaccgcgcc
    16681 acccgataaa cccctttcag acggcacggc atcccggttc gtgccgtctg aacccgtttc
    16741 cgggtcaaac acaaataaac cttgcctgca tacaggcctt atttgtgttt tacccgtttc
    16801 attttcaaag aaacggaagc acctaccctg cccgcatttg aagccttgta tttcatctgc
    16861 ggatttatta cgatattacc gtattcagac cgcaccgatg ccgtctgaac cccccgaaaa
    16921 actttggaga atccaaaaaa tgtttcattt tgcatttccg gcacaaactg ccctgcgcca
    16981 agcgataacc gatgcctacc gccgtaatga aatcgaagcc gtacaggata tgttgcaacg
    17041 tgcacagatg agcgacgaag agcgcaacgc cgcctccgag cttgcccgcc gtttggttac
    17101 ccaagtccgc gccggccgca ccaaagccgg cggcgtggat gcgctgatgc acgagttttc
    17161 actctccagc gaagaaggca tcgcgctgat gtgtctggca gaagccctgc tgcgtatccc
    17221 cgacaacgcc acgcgcgacc gcctgattgc cgacaagatt tcagacggca actggaaaag
    17281 ccatttgaac aacagccctt ccctcttcgt caacgccgcc gcctggggcc tgctgattac
    17341 cggcaaactg accgccacaa acgacagaca aatgagttcc gcactcagcc gcctgatcag
    17401 caaaggcggc gcaccgctca tccgccaagg cgtaaattac gccatgcgcc tgttgggcaa
    17461 acagttcgta accggacaga ccattgaaga agccctgcaa aacggcaaag aacgcgaaaa
    17521 aatgggctac cgcttctcct tcgatatgtt gggcgaagcc gcctacaccc aagccgatgc
    17581 cgaccgctac taccgcgact atgtcgaagc catccacgcc atcggcaaag atgcggcagg
    17641 acaaggcgtt tacgaaggca acggcatttc cgtcaaactc tccgccatac atccgcgcta
    17701 ctcgcgcgcc caacacggcc gtgtgatggg cgaactgttg ccgcgcctga aagagctgtt
    17761 ccttttgggt aaaaaatacg atatcggtat caacatcgat gccgaagaag ccaaccgtct
    17821 ggagctgtct ttggatttga tggaggcact cgtttccgat cccgatttgg caggctacaa
    17881 aggcatcggt ttcgttgttc aagcctacca aaaacgttgt ccgttcgtta tcgactacct
    17941 gatcgacctt gcccgccgca acaaccaaaa actaatgatc cgcctcgtca aaggcgcgta
    18001 ttgggacagc gaaatcaaat gggcgcaagt ggacggcttg aacggctatc cgacctacac
    18061 ccgcaaagtc cacaccgaca tctcctacct cgcctgcgcg cgcaaactgc tttccgcgca
    18121 agacgcggta tttccgcaat tcgccaccca caacgcctac accttgggcg caatctacca
    18181 aatgggcaaa ggcaaagact ttgaacacca atgtctgcac ggcatgggcg aaaccctgta
    18241 cgaccaagtc gtcggcccgc aaaacttagg ccgccgcgtg cgcgtgtacg ccccggtcgg
    18301 cacacacgaa accctgctcg cctacttggt gcgccgcctg ttggaaaacg gcgcgaactc
    18361 gtctttcgtc aaccaaatcg tcgatgaaaa catcagcatc gacacgctca tccgcagccc
    18421 gttcgacacc atcgccgaac aaggcatcca cctgcacaac gccctgccgc tgccgcgcga
    18481 tttgtacggc aaatgccgtc tgaactcgca aggcgtggac ttgagcaacg aaaacgtatt
    18541 gcagcagctt caagaacaga tgaacaaagc cgccgcgcaa gacttccacg ccgcatccat
    18601 cgtcaacggc aaagcccgcg atgtcggcga agcgcaaccg attaaaaacc ctgccgacca
    18661 cgacgacatc gtcggcacag tcagctttgc cgatgccgcg cttgcccaag aagcggttgg
    18721 cgcagccgtt gccgcgttcc ccgaatggag tgcgacacct gccgccgaac gcgccgcctg
    18781 cctgcgccgt ttcgccgacc tgctcgaaca gcacaccccc gcgctgatga tgcttgccgt
    18841 gcgcgaagca ggcaaaacgc tgaacaacgc cattgccgaa gtgcgcgaag ccgtcgattt
    18901 ctgccgctac tacgcaaacg aagccgaaca taccctgcct caagacgcaa aagccgtcgg
    18961 cgcgattgtc gccatcagcc cgtggaactt cccgctcgcc atctttaccg gcgaagtcgt
    19021 ttccgcattg gcggcaggca acaccgtcat cgccaaaccc gccgaacaaa ccagcctgat
    19081 tgccggttat gccgtttccc tcatgcacga agccggcatc ccgacttccg ccctgcaact
    19141 cgtcctcggc gcaggcgacg tgggtgcggc attgaccaac gatgcccgca tcggcggcgt
    19201 gattttcacc ggctcgaccg aagtggcgcg cctgatcaac aaagcccttg ccaaacgcgg
    19261 cgacaatccc gtcctgattg ccgaaaccgg cggacaaaac gccatgattg tcgattccac
    19321 cgcacttgcc gaacaagtct gcgccgacgt attgaactcc gccttcgaca gcgcgggaca
    19381 acgctgctcc gccctgcgta tcttgtgcgt ccaagaagac gttgccgacc gtatgctcga
    19441 catgatcaaa ggcgcgatgg acgaactcgt cgtcggcaaa ccgattcagc tcactaccga
    19501 tgtcggcccc gtcatcgatg ccgaagcaca gcaaaacctg ttgaaccaca tcaacaaaat
    19561 gaaaggcgtt gccaagtctt accacgaagt caaaaccgct gccgatgtcg attccgaaaa
    19621 atccacgttc gtccgcccca tcctgtttga attgaacaac ctcaacgaac tgcaacgcga
    19681 agtcttcggt cccgtcctgc acgtcgtccg ctaccgcgcc gacaaactcg acagcgtcat
    19741 cgaccaaatc aacagcaaag gctacgccct gacccacggc gtacacagcc gcatcgaagg
    19801 cacagtacgc cacatccgca gccgcatcga agccggcaac gtttacgtca accgcaacat
    19861 cgtcggcgca gtcgtcggcg tacagccctt cggcggacac ggtctgtccg gcacaggccc
    19921 caaagcaggc ggttcgttct acctgcaaaa actgacccgc atccccgaat gggttgcccc
    19981 gaccctgagc caaatcggac aggcagacga agccgcgctc aaacgcctcg aagcactggt
    20041 tcacaaactg ccgttcaacg ccgaagagaa aaaagccgca gcggccgctt tgggacacgc
    20101 ccgcatccgc accctgcgcc gtgccgaaac cgtccttacc ggcccgaccg gcgagcgcaa
    20161 cagcatctca tggcacgcgc caaaacgcgt ctgggtacac ggcggcagcc tcctgcaagc
    20221 cttctgcgcc ctaaccgaac ttgccgcctc cggcgtacag gcagtggtcg aacccgacag
    20281 cccgctggct tcctacaccg ccgacttgga aggtctgctg ctggtcaacg gcaaacccga
    20341 aaccgccgac atcagccacg ttgccgccct gtcgcctttg gacagcgcgc gcaaacagga
    20401 acttgccgcc cacgacggcg cactcatccg catcctccct tcggaaaacg gactcgacat
    20461 cctgcaagtg tttgaagaaa tctcttgcag cgtcaacacc acagccgccg gcggcaacgc
    20521 cagcctgatg gcggttgccg actgatttta ccgaaatccc cgagcgcggc ccgtgaacca
    20581 atgccgtctg aaaacctttc agacggca
//
LOCUS       DAWGBY010000022        20590 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.022, whole genome shotgun sequence.
ACCESSION   DAWGBY010000022 DAWGBY010000000
VERSION     DAWGBY010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20590
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.022"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(106..354)
                     /locus_tag="WHG62_000727"
     CDS             complement(106..354)
                     /locus_tag="WHG62_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724870.1"
                     /translation="MNIKNEIVALISKKIDGGQYSSLENFALSVLREKIIKNTVSSDE
                     KLLIINDFLSGFLEFDPETGKPVGETLKIEQMIDFFLV"
     gene            complement(400..822)
                     /locus_tag="WHG62_000728"
     CDS             complement(400..822)
                     /locus_tag="WHG62_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="wall-associated protein precursor"
                     /protein_id="HEZ1724871.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAALWFAPVLAGGGRFALTGFTRHGLNQAISRGGVGVSNKAIMNTMR
                     NPTKITSQSGGRTRFTGADGGVVLNSQGKVITTWGKPR"
     gene            complement(910..1134)
                     /locus_tag="WHG62_000729"
     CDS             complement(910..1134)
                     /locus_tag="WHG62_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724872.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQESSGKTEEPSYFLMFMFL
                     NLLWFEENKTVMAAVTAMIAAHFIFVALSD"
     gene            complement(1404..1691)
                     /locus_tag="WHG62_000730"
     CDS             complement(1404..1691)
                     /locus_tag="WHG62_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724873.1"
                     /translation="MDDLIAAFLGYLSGKYSEGKISRLEISLTAGSIFFVVFFIHELI
                     IFIVDGNKENLWSFITGIMKDLFLFSCSVCLLFYFLLFIAETIGKTINKIK"
     gene            complement(1998..2369)
                     /locus_tag="WHG62_000731"
     CDS             complement(1998..2369)
                     /locus_tag="WHG62_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724874.1"
                     /translation="MRFYIDNKECDYIFFRKAVNISDDFIQSGFITPEGLITKNSNPK
                     LFNQYSKMVSKNKCQYEMVTFLSDEMKNIIELLSNDDAYIEFAYSEDFYVLPEIKIDK
                     RTLKSLNFYIDFGVKYIINKI"
     gene            complement(2503..2946)
                     /locus_tag="WHG62_000732"
     CDS             complement(2503..2946)
                     /locus_tag="WHG62_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724875.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAAAPLVAIGILHAGRFLAQRWVTQRVAAQALSRGANVYARTSQQAR
                     AVANQAWGRQNVIRHGQKEIHSNYSHFQNSSQKIRGHAFYGNKHR"
     gene            complement(2989..3858)
                     /locus_tag="WHG62_000733"
     CDS             complement(2989..3858)
                     /locus_tag="WHG62_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ1724876.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGTQPDRIDGKKETARNTSTYAHFGTGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            4022..4945
                     /locus_tag="WHG62_000734"
     CDS             4022..4945
                     /locus_tag="WHG62_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ1724877.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(5023..5664)
                     /locus_tag="WHG62_000735"
     CDS             complement(5023..5664)
                     /locus_tag="WHG62_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ1724878.1"
                     /translation="MLKPETIHISGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIEKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(5719..6510)
                     /locus_tag="WHG62_000736"
     CDS             complement(5719..6510)
                     /locus_tag="WHG62_000736"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ1724879.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     RPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLNVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            6676..6751
                     /locus_tag="WHG62_000737"
     tRNA            6676..6751
                     /locus_tag="WHG62_000737"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6709..6711,aa:Thr,seq:tgt)
     gene            6786..6861
                     /locus_tag="WHG62_000738"
     tRNA            6786..6861
                     /locus_tag="WHG62_000738"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6819..6821,aa:Thr,seq:tgt)
     gene            7003..7794
                     /gene="panB"
                     /locus_tag="WHG62_000739"
     CDS             7003..7794
                     /gene="panB"
                     /locus_tag="WHG62_000739"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ1724880.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVDVLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTETVACPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMHGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            7784..7960
                     /locus_tag="WHG62_000740"
     CDS             7784..7960
                     /locus_tag="WHG62_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724881.1"
                     /translation="MQTEQGLLLMPSESRFRRHFVLPCAARIIGAFCRAGSPKDKDYR
                     YANHTYHSRTARVA"
     gene            7917..8753
                     /locus_tag="WHG62_000741"
     CDS             7917..8753
                     /locus_tag="WHG62_000741"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ1724882.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLAQGSLDYA
                     GLEKRAVQSLTEYGWVVDYVEIRRVDTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            8918..10756
                     /locus_tag="WHG62_000742"
     CDS             8918..10756
                     /locus_tag="WHG62_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724883.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADAKPPKEVVKVFRKQQR
                     YSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEV
                     LAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQG
                     REKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTEEQRSRAALTAAMMYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGSNT
                     ELQAEALVQRSVVYDRLGKRKKMISDLERAFRFAPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            10897..11478
                     /locus_tag="WHG62_000743"
     CDS             10897..11478
                     /locus_tag="WHG62_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ1724884.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPLVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            11488..12333
                     /gene="ispE"
                     /locus_tag="WHG62_000744"
     CDS             11488..12333
                     /gene="ispE"
                     /locus_tag="WHG62_000744"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ1724885.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGKREDGYHNIESIFCLIDLQD
                     TVYLKLRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHESLTRDSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKH
                     PWLSV"
     gene            12341..12416
                     /locus_tag="WHG62_000745"
     tRNA            12341..12416
                     /locus_tag="WHG62_000745"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12374..12376,aa:Gln,seq:ttg)
     gene            12429..12504
                     /locus_tag="WHG62_000746"
     tRNA            12429..12504
                     /locus_tag="WHG62_000746"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12462..12464,aa:Gln,seq:ttg)
     gene            12513..12588
                     /locus_tag="WHG62_000747"
     tRNA            12513..12588
                     /locus_tag="WHG62_000747"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12546..12548,aa:Gln,seq:ttg)
     gene            12755..13738
                     /locus_tag="WHG62_000748"
     CDS             12755..13738
                     /locus_tag="WHG62_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ1724886.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            13805..14377
                     /locus_tag="WHG62_000749"
     CDS             13805..14377
                     /locus_tag="WHG62_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ1724887.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(14502..15671)
                     /locus_tag="WHG62_000750"
     CDS             complement(14502..15671)
                     /locus_tag="WHG62_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ1724888.1"
                     /translation="MTAHKILPVLLSIILGVSHTTAASPAPNKLTVHAAPTLQTPETL
                     TAAHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQVLGKIKIRQNGYTIAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            15819..17345
                     /gene="ilvA"
                     /locus_tag="WHG62_000751"
     CDS             15819..17345
                     /gene="ilvA"
                     /locus_tag="WHG62_000751"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ1724889.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSHGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFINILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(17402..18475)
                     /locus_tag="WHG62_000752"
     CDS             complement(17402..18475)
                     /locus_tag="WHG62_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ1724890.1"
                     /translation="MSITIQNLNKHFGAFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLNAQYKWQEQTAIGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(18472..19332)
                     /gene="cysW"
                     /locus_tag="WHG62_000753"
     CDS             complement(18472..19332)
                     /gene="cysW"
                     /locus_tag="WHG62_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ1724891.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTIPLLVEIFYNEYNFTGAFALSGVLALLALATLLVQNIITKLQDK
                     KLAAAERNAA"
     gene            complement(19587..20423)
                     /gene="cysT"
                     /locus_tag="WHG62_000754"
     CDS             complement(19587..20423)
                     /gene="cysT"
                     /locus_tag="WHG62_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ1724892.1"
                     /translation="MLLLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
BASE COUNT         5062 a         4709 c         5537 g         5282 t
ORIGIN      
        1 actagagttt aaacaacttt atttttgatt ttatcccaag tataaacctg acaatcgtat
       61 ttaaaagccg gatatacgcc tagcttgttc actggtatgt atgatttaga ctaaaaagaa
      121 atcaatcatt tgctcaattt taagcgtctc cccgacaggt ttcccggtct caggatcaaa
      181 ctcaagaaaa cctgataaaa aatcattaat aatcaataat ttttcatcac tggaaacagt
      241 attttttata attttttccc ttagtacgga taaagcaaaa ttttctaaag aactatattg
      301 ccccccatca atttttttag aaattaaagc aactatttca tttttaatat tcataaatta
      361 cccttaagtt ataaaagggg caaagccccc tttttttgat taacgaggtt tgccccatgt
      421 agtaattact ttaccttgac tattcaaaac aacaccacca tcagctcctg taaaacgggt
      481 tcttcctcct gattggcttg taatttttgt agggttacgc atagtgttca taatcgcttt
      541 atttgaaact cccacaccac cacgagaaat agcctgattt aaaccatgcc gagtaaatcc
      601 tgtcagtgca aatctgccac cacctgccaa cacgggagca aaccataatg cagccccctc
      661 agtttccttc atctcctttt gagaaagctc cgccaactgc atcggcgcat ctgcccgcgt
      721 gtggaacact tggtcttcaa atgcctgatt gtccaagccg tttgccattg cgggggcaat
      781 catagacagc atcattacgg ctgcggtgat ttgttttttc ataacaaatt cttagggagg
      841 agataatgtt ccatcaaaat cctcctgaaa ggctgcctga aatttccaag cagccttttt
      901 gattgcttat taatcggata gtgcgacaaa tataaagtgg gcggcaatca ttgccgtaac
      961 ggcagccata actgttttat tttcttcaaa ccaaagcaag ttgagaaaca taaacatcaa
     1021 gaaatatgat ggttcttcag ttttgccgct gctttcttga gttagaagat aaaatataga
     1081 tatggcggtt atgccgattg ctgcttttat taaaatatat ttgtttttca tcatcttgta
     1141 tggtttttca tgcaagtttc aacaataaaa ttcggaataa gatagagaga tgttgatatt
     1201 tcagataaat atacaaaaca atcaagaaac tattggcagt atgtataatc ttgaatttct
     1261 ttttttgatg aaattaaaat aatgaaatat atggtaaacg ttacaacgga agccttagcc
     1321 tcccgattgc agtatttcaa ttccaagata aatgccgcat agaagataaa atactcaaat
     1381 ggttttttag cggcttaaat atcttattta atcttattga ttgttttccc aatggtttcc
     1441 gcaataaata ataagaagta gaataataaa caaacagaac atgaaaataa aaataaatct
     1501 ttcattatcc cagtaataaa actccaaaga ttttccttat ttccatcaac aataaaaatt
     1561 atcagttcat gaataaagaa tactacaaag aaaatgcttc ctgccgttag agatatttct
     1621 aatctgctta ttttcccttc gctatattta cctgataaat agcctaaaaa agctgcaatc
     1681 aaatcatcca ttttaaaaat ttctgtaaaa acaggtaatg tctttaattc attacctgtt
     1741 ttgccattat ttatagtgga ttaaatttaa atcaggacaa ggcgacgaag ccgcagacag
     1801 tacaaatagt acggcaaggc gaggcaacgc cgtactaatc cactatatat atccattcat
     1861 atagagaaaa attcttatac ccaatataaa acaaggtctt tcattatatt ttgaaaaacc
     1921 tagaagcttt gtatctattg gtttatcaaa attaataatt attgcagaag acatgtaggc
     1981 taataatctt gatttatcta tattttatta attatatatt taaccccgaa gtcaatatag
     2041 aaatttagtg attttaaagt tctcttatca attttaatct cagggagtac ataaaaatcc
     2101 tcagaatagg caaactctat atatgcatca tcattcgata ataattcaat aatatttttc
     2161 atttcatccg aaagaaatgt aaccatctca tattgacatt tatttttaga taccattttt
     2221 gaatattgat taaataattt tggattacta tttttagtaa ttaatccttc cggagtaata
     2281 aaaccacttt gtataaagtc atcacttata ttaacagcct tccgaaaaaa aatataatca
     2341 cactctttgt tatcaatata aaatctcata ctctttaata atgaaatata agaatttcca
     2401 gaattacaag caatttgaaa aaacatcatt actcctaaaa ctcataaata gtaaggaata
     2461 tatatatatg catattcctt actatttttt cacaaattat gcttatctat gcttatttcc
     2521 ataaaaagca tgccctcgaa ttttttgact tgagttctgg aaatgagaat aatttgaatg
     2581 gatttccttc tgtccatgtc taataacatt ttgtcttccc caagcttggt ttgctaccgc
     2641 tcttgcttgt tgagatgttc gtgcatagac attagctcct cttgataaag cttgtgctgc
     2701 aacacgctgc gtaacccaac gctgcgcaag gaatctgccc gcatgcaaaa ttcctattgc
     2761 caccaacggt gccgcagccc cttcagtttc tttcatctcc ttttgagaaa gctccgccaa
     2821 ctgcatcggc gcatctgcct gcgtgtggaa cacttggttt tcaaatgtct gattgtccaa
     2881 gccgtttgcc attgcggggg caatcataga cagcatcatt acggctgcgg tgatttgttt
     2941 tttcataata actcctttgg attacaaggt tggaaaatca aaacctgctt aaaatgtatg
     3001 ctgtacgcca aatttcagtt cggaactgct ttgccctgaa acgttgaaac gtgcggatgc
     3061 gtttaaagcc gtggttttgg tgaaaccgaa acctgtgccg aaatgagcgt aggtggatgt
     3121 gtttcttgcg gtttcttttt tgccgtctat gcggtcgggc tgtgtgccca gccattggat
     3181 gcctccggtc aggctgattc tgtcgttggc ggcaaatgag atgttggggt tgagcagcag
     3241 gtagttgccc gatttgtagc ggatgccgtc tgaaagggtt ttgctgccgt tgatgcggta
     3301 ggcggcggtg agggaaagga caatcggatc tatggctttg taggtggtgg cgccgatgag
     3361 ccaggatttt cccgacgagg ctttgttgcg cgatttttcg taaaccgtgc tttcaagaaa
     3421 gctgattagg gcggggtttt tgtcgtcttt aaggaaagtg tggctgatgc cgagggatac
     3481 gtcggacatc cgtttgttgc gggttttgcc gttgccgtcg agtttgcgtt cttcgtgcca
     3541 cagatagctg ccgctgccgt aaatgtcggt attcccggtc agtccgtagc gcaaaccgag
     3601 cgtgccaacg agcatatcgg tattgctgcc gttttcttgg atttcggtcg gaatggggat
     3661 aaacgaggtt gcgccggttt ggatgtaaac cggtgcggca agttcggcgc ggttgttttc
     3721 gctgttcagg taggtaaggg aagtttccag tttccatttg cccttgtcgg tcattatgtc
     3781 ttcaatcgtc aagggcaggt cggcataagc ggataaaggc aggatggcgg gcaaggcggg
     3841 caaaaagatg cgcttcatat ttctcctatt gatattaatt cttatttact gataataatg
     3901 aatatccgat aatcttgtct aaataaattt ttaaatcaaa aaaaacgata tatttgtttt
     3961 tgtcaattat gttttgatat gccgtctgaa aagtttgtga aaaacggtta caatccgcca
     4021 catgaaaaaa cgcaataatc ctcttcctct gttgaacggt gtcaaaccca gttatttggt
     4081 gctgccgcat gaaaagcagt tttacgggct gccgctgctg cattttctgt gcatccgctt
     4141 tccttttgtg ggcgcggacg attggcgcag gcggttgaac agcggttttg tggtcggttc
     4201 ggatggtgcg gcgttggacg aacatacttt gttcgagccg ggtaaggtga tgttttatta
     4261 tcgggaaacc agcagtgagg atgagccgcg tattccgttt gaagaaaaga ttttgcatat
     4321 tgatgagcat ttgattgtgg tggacaagcc gcattttctg cccgtcatcc ccagcgggcg
     4381 ttttttaagg gaaacgctgc tcacacgtct gcgcctgcgt cccgaattgc agcatttgaa
     4441 tgttgaagac attacgccgc tgcaccgctt ggacaaggat acggcaggcg tgatgttgtt
     4501 gtcgcacaat cctgccacgc gcggggctta tcagacgatg tttcaaaaca aaacggtatg
     4561 gaaaacgtat gaggcgcttg cgccgacaag gacggatttg ccgtatccgc tcgatgtggt
     4621 ttcgcgtttg gtgaggggtg agaaattttt tacgacgcaa gaggcggaag gcgaaccaaa
     4681 cgcacatacg acggtcgaac tgattgaaaa caggggggaa ttcagccttt accgccttac
     4741 gccgcatacg ggcaagaaac accagttgcg cgtgcatatg atgggcttgg gtatgccgct
     4801 gttgaatgac gcgctctatc ccgtgccgtc tgaagcgggc agcgaggatt atcggaaacc
     4861 tttgaagcta ttggcaaaaa agattgcgtt tgcagatcct ttgtcgggtc gggaaagggt
     4921 gttttgcagc ggattttgcc tataatgaga gggaacgcaa acccgtatcg gcggatgccg
     4981 ccgatacggg ttttacatta tcgatgccgt ctgaaagggg ttttatccgt tcaggcatac
     5041 gggcgcgaag cggaggatgg tgtcgcgcag gacgatgagt ttgccgtgaa agaaatgcgt
     5101 ggaaccggcg atggtaatga cgggcaaatc ttgcggttcc gcccatttca gtgctttttc
     5161 gatttcgacg acttcatctt ccgcgccgtg tatcatcagt gtttttgcaa cgttgggaac
     5221 ggcggacggc tcggggcggc cggtatagtg gcagactgcc gcgccgatga gcagcaataa
     5281 atcgggtatg cgcgcttgtg cggcaaatgt ggcgacataa ccgccgaagg agaagccgga
     5341 taaggcaaat tcgggggctt cgggatgttg ggcacgggca tagtcgatga cggcgaggca
     5401 gtcttgcgtt tcgccgcgtc cgtaatcgtg tgtgccttcg ctgccgccta cgccgcgaag
     5461 gttgggcagg tagcagtgga agccgagttt gcttaaggct ttggcggcag tttggataac
     5521 tttgttggtg tttgttccgc cctggagggg gttgggatga ttgatgacgg caacaccgcg
     5581 tgccggtact tgttcggacg ggatatggat ggtttctaaa atgccggcag gaccggatat
     5641 gtgtatggtt tcgggtttca gcataatgat ttcctcttga ttttccgcat gttccgatgc
     5701 agccgtgaag atagttgctt aaaggtggaa atgcttgccg ttgttggggt tggacgcttt
     5761 caggccggca agcatacggt ggaagtccaa tccgtatgcg ttgctcagtt tgtcggcacg
     5821 ttttttgagt ttgtctatgt tttgctcttt ggggctgctt tggaaggcca ttaccgcgac
     5881 attgccgtgg ctttcggcag gaagttccaa gacgcgccct tcaaagacgt ttaacaggcg
     5941 ttcgatgaag cgttggtagc gtttgtcgcc gctccaccag ttggtcacga atatgccgtc
     6001 tgaagagagt gcgttgcggc agtctcggaa gaacggttct tcaaccagcg tatcgatgat
     6061 ttgttcgccg tcgaatccgt ccaccaagat gatatcggtg ttgtggcgga agactttgat
     6121 atattccgca ccgtctgctt caataatttc aaatttctcg ccctcgaaag gcaactcaaa
     6181 caggttgcgg gcaatggcga taacctgcgg gttgatatct acagcagttt gacgtgtatc
     6241 gggcaggtag gtatctatcc agcgtgcaaa cgaaccgccg cccaagccga tttgggtgat
     6301 atgctgcgga agtgcgtcgg taaacagcag ccagcccatc atcgcgcggc tgtaagagag
     6361 taccagctcg gacgggcggt cgaggttcat cgagctttga acggtgtcgc tgcccaagtg
     6421 aagcgaacgg atattgcctt cttcggaaat gccgacttcg ggaaagccgg attttgcagg
     6481 acgcaggcgg cggtagggat gtcttgccat cggtgtgaac ggtcggtttg aaaggcggat
     6541 attttatcag aatgccgatg cttgtcctgc ttcaaattaa tttcttttca aataaattac
     6601 ttattcggat ttgccggggc tttcggataa attccttgcc aaggtgcggc attgcctgca
     6661 taattcgctt tctttgccgg tatagctcag ttggtagagc acctgacttg taatcagggg
     6721 gtcccgagtt cgactcttgg tgccggcacc atttctgctg atggtgttgc aaaacatttc
     6781 agtaagccgg tatagctcag ttggtagagc acctgacttg taatcagggg gtcccgagtt
     6841 cgactcttgg tgccggcacc agatttgaca gtccgattgt gtaaaacagt cgggctgttt
     6901 tgcatttgcg gcacggtcgg tggcagggct gcgggcattt cactataata gcccgtttca
     6961 aactgaaaag gccgtctgaa aagggcgggg taacaatatc tgatgattac tgtgaacaca
     7021 ctgcaaaaaa tgaaggcggc aggtgagaaa atcgccatgc tgaccgctta cgaatccagt
     7081 tttgccgcac tgatggacga tgccggcgtg gatgtgctgt tggttgggga ttctttggga
     7141 atggcggttc aagggcggaa atcgacgctg cccgtcagcc tgcgcgatat gtgctatcac
     7201 actgaatgtg tggcgcgcgg tgcaaaaaat gcgatgattg tcagcgattt gccgtttggt
     7261 gcatatcagc agagtaagga gcaggcgttt gccgccgccg ccgaactgat ggcggcagga
     7321 gcgcatatgg tcaaactcga aggcggcgtg tggatggcgg aaacgactga atttctgcaa
     7381 atgcgcggta ttccggtttg cgcgcacatc ggtctgacgc cgcaatccgt gtttgccttt
     7441 ggcggatata aggttcaggg gcgcggcggc aaggcgcagg ctttgcttaa cgatgccaag
     7501 gcgcacgatg atgcgggggc ggcggttgta ttgatggagt gtgttcctgc ggaactggca
     7561 aaaaaggtaa ctgaaactgt tgcctgtccg accatcggca tcggcgcggg tgtcgattgc
     7621 gacgggcagg ttttggtgat gcacgatatg ctcggcattt tcccgggtaa gacggcgaaa
     7681 ttcgtcaaaa actttatgca cgggcaaagc agcattcagg cggcggttcg ggcgtatgtt
     7741 gccgaagtca aagccaaaac cttccctgct gcggaacata tttttgcaga ctgaacaagg
     7801 tttgctgctg atgccgtctg aaagccgttt cagacggcat tttgttttgc cgtgcgcggc
     7861 gcgtataatc ggcgcgtttt gtcgggcagg aagcccgaag gataaggatt accgttatgc
     7921 aaatcataca taccattcga gaactgcgcg cgtggcgtaa aaatgcggga aaggtggcat
     7981 ttgtgccgac catgggcaat ctgcatgaag ggcatcttgc gcttgtgcgt gaggcgaaaa
     8041 aacgcgcgga cagtgtcgtg gtcagcattt tcgtcaaccg cctgcaattc ggtcagggcg
     8101 aggatttcga caaatatccg cgtactttgc aacaggatgc ggacaagctg gaagccgagg
     8161 gtgttgccgt tgttttcgcg cccgatgaga aagaactcta tccgaacgtg gagcaacggt
     8221 ataacgtcga accgcccaac ctgcaaaatg agttgtgcgg caagtttcgt ccgggacatt
     8281 tccgcggggt ggcaacggta gtgtccaagc tgttcaatat tgtcgcgccg gatgttgcct
     8341 gtttcggcaa aaaagactat cagcagcttg ccgtgattaa aggtttgacc gaggatttga
     8401 attttgatgt tgaaatagtg cctgtcgata cggggcgcgc ggaagacggt ttggcactct
     8461 ccagccgcaa ccagtatttg agtgcggcgg aacgcgacga agcaccgcgc ctgtaccgcg
     8521 aattaaaggc tgttgccgaa tccttggcgc agggcagttt ggattatgca ggtttggaaa
     8581 aacgtgccgt ccaatccctg acagaatacg gctgggtggt cgattatgtc gaaatccgcc
     8641 gcgtcgatac gctcgaagtg gcgcgggcgg gagataagaa actggtggtc ttggccgccg
     8701 cccgtctggg gacgacgcgc ctgattgaca atttggaaat aaaactccct taaaccgcaa
     8761 gcgtcgggaa tgccgtctga agcggatttg cgtttcagac ggcatttatt tttttgaacg
     8821 gggtttcgca aatctacaaa cgattctgct tgtgataaag ttacgcctga ttatatgccg
     8881 tctgaaggtt cggacggctg tcggataaag gaagattatg ttacccgccc gtttcaccat
     8941 tttatctgtg ctcgcggcag ccctgcttgc cgggcaggcg tatgccgccg gcgcggcgga
     9001 tgcgaagccg ccgaaggaag tcgtaaaggt tttcagaaag cagcagcgtt acagcgagga
     9061 agaaatcaaa aacgaacgcg cacggcttgc ggcagtgggc gagcgggtta atcagatatt
     9121 tacgttgctg ggaggggaaa ccgccttgca aaaggggcag gcgggaacgg ctttggcaac
     9181 ctatatgctg atgttggaac gcacaaaatc ccccgaagtc gccgaacgcg ccttggaaat
     9241 ggccgtgtcg ctgaacgcgt ttgaacaggc ggaaatgatt tatcagaaat ggcggcagat
     9301 tgagcctata ccgggtaagg cgcaaaaacg ggcggggtgg ctgcggaacg tgctgaggga
     9361 aagaggaaat cagcatctgg acggactgga agaagtgctg gctcaggcgg acgaaggaca
     9421 gaaccgcagg gtgtttttat tgttggcaca agccgccgtg caacaggacg ggttggcgca
     9481 aaaagcatcg aaagcggttc gccgtgcggc gttgaaatat gaacatctgc ccgaagcggc
     9541 ggttgccgat gtggtgttca gcgtacaggg gcgtgaaaag gaaaaggcaa tcggagcttt
     9601 gcagcgtttg gcgaagctcg atacggaaat attgcccccc actttaatga cgttgcgtct
     9661 gactgcacgc aaatatcccg aaatactcga cggctttttc gagcagacag acacccaaaa
     9721 cctttcggcc gtctggcagg aaatggaaat tatgaatctg gtttccctgc acaggctgga
     9781 tgatgcctat gcgcgtttga acgtgctgtt ggaacgcaat ccgaatgcag acctgtatat
     9841 tcaggcagcg atattggcgg caaaccgaaa agaaggtgct tccgttatcg acggctacgc
     9901 cgaaaaggca tacggcaggg ggacggagga acagcggagc agggcggcgc taacggcggc
     9961 gatgatgtat gccgaccgaa gggattacac caaagtcagg cagtggttga aaaaagtgtc
    10021 cgcgccggaa tacctgttcg acaaaggtgt gctggcggct gcggcggctg tcgagttgga
    10081 cggcggcagg gcggctttgc ggcagatcgg cagggtgcgg aaacttcccg aacagcaggg
    10141 gcggtatttt acggcagaca atttgtccaa aatacagatg ctcgccctgt cgaagctgcc
    10201 cgacaaacgg gaggctttga gggggttgga caagattatc gaaaaaccgc ctgccggcag
    10261 taatacagag ttacaggcag aggcattggt acagcggtca gttgtttacg atcggcttgg
    10321 caagcggaaa aaaatgattt cagatcttga aagggcgttc aggtttgcac ccgataacgc
    10381 tcagattatg aataatctgg gctacagcct gctttccgat tccaaacgtt tggacgaagg
    10441 cttcgccctg cttcagacgg cataccaaat caacccggac gataccgctg tcaacgacag
    10501 cataggctgg gcgtattacc tgaaaggcga cgcggaaagc gcgctgccgt atctgcggta
    10561 ttcgtttgaa aacgaccccg agcccgaagt tgccgcccat ttgggcgaag tgttgtgggc
    10621 attgggcgaa cgcgatcagg cggttgacgt atggacgcag gcggcacacc ttacgggaga
    10681 caagaaaata tggcgggaaa cgctcaaacg tcacggcatc gcattgcccc aaccttcccg
    10741 aaaacctcgg aaataatgca ggtccatcct ttcagacggc ataaggtttg ccgggaagcc
    10801 ggggcattcg ggcaaacggc acgcagttcg cacgcgttat tgcacggcac accgaaccca
    10861 tcggccggca ggatggcatc cgttaaggaa attctgatga aacacactgt atccgcatcg
    10921 gtcatcctgc ttttgaccgc ttgcgcgcaa ttgcctcaaa ataacgaaaa cctgtggcag
    10981 ccgtccgaac acacccgcag tttcacggca gaagggcggt tggcagtgaa agcggaaggg
    11041 aaaggttcgt atgcaaattt cgattggaca taccaaccgc tcgtggaaac catcaatatc
    11101 aacacccctt tgggcagtac gctcgggcag ttgtgtcaag acagggacgg cgcattggca
    11161 gtggacggca aaggaaatgt ctatcaggcg gaaagtgcgg aagaattgag caggcagctg
    11221 gtcggtttca aactgccaat ccaatatctg catatctggg cagatggcag gcgtgtggcg
    11281 ggcgcgcctt accgcatcct gccggacggc atattggaac aatacggttg gactgtcggc
    11341 agaaccgccg acagtggggg gcaagtccga acgttgcaac tgaataacgg aaatttgaac
    11401 atcaggctgg ttttcaccga aatcggtatg ccgtctgaaa ccgaaacccc ggaacgctgt
    11461 gcggcgcgca cgagataagg cggacagatg aatattgcgg acggacggca ggcgtttccc
    11521 gcacctgcaa aactgaatct cgatttgagg attactggaa agcgggaaga cggttatcac
    11581 aatatcgaaa gcatattctg cctgatagat ttgcaggata ccgtatattt gaaactaagg
    11641 gacgacggca aaatcatcct gcacaatccg gttgatggaa tgccgcagga agtagattta
    11701 agctaccgtg ccgcatcgtt gctgcaaaaa tatgcgcgca accccgccgg cgtggaaata
    11761 tggctggaca aaaaaatccc gacaggggcg ggtttgggcg gcggaagctc ggatgcggca
    11821 accgttttgc tggtgttgaa ccgttggtgg cagtgcggtc tgacgcagcg gcagctcatt
    11881 gattcgggcg cggctctggg ggcggacgta ccgtttttta ttttcggaaa aaatgcgttt
    11941 gcgcggggta taggcgacag gctggacgaa atggatattc cgaaacagtg gtatgtcatc
    12001 gtcaaaccgc ccgtccacgt ttccactgca aaaattttca cacacgaaag cttgacacgg
    12061 gattctgcct caagcataat gccgactttc caaaacctgc aaccgtttag aaatgatatg
    12121 caggcagttg tatttaaaga ataccctgaa gtttggaaag cctattccga gttgtcccga
    12181 tatggatttg ccttaatgac aggttctggt gcgtgtgtat tcacggcgtg tcaagatagg
    12241 aatagcgcat acaatatata ccgacaagtt tcagatttgt acgaggcata tttggcagag
    12301 ggtctttcaa aacatccttg gttgtccgta taaacattgt tggggagtcg tcaagcggtt
    12361 aagacactgg attttgattc cagcatgcga aggttcgaat ccttcctccc cagccaagcc
    12421 aaacgagttg gggagtcgtc aagcggttaa gacactggat tttgattcca gcatgcgaag
    12481 gttcgaatcc ttcctcccca gccagccctt tttggggagt cgtcaagcgg ttaagacact
    12541 ggattttgat tccagcatgc gaaggttcga atccttcctc cccagccaaa taaaagcgtg
    12601 taagcctgct tacacgcttt tatttcatag aaataaaaat attgaaatgc ctttgtttgt
    12661 gtcggatgtt gcaggtataa tgtcgggctt ggtacaagca gagggaagca ttgtgttttc
    12721 tgagcggaag ttaaacataa aatcaggtga gaatatggct gcgtacgaca gtttgatggt
    12781 atttacaggc aatgccaatc ccgaattggc acaacgtgtt gtcaggcatt tggacatttc
    12841 tttgggcaat gcttccgtat ccaagttttc agacggcgaa gttgccgtcg aactgttgga
    12901 aaacgtacgc gggcgcgatg ttttcatcct tcagccgacc tgtgcgccga ccaatgacaa
    12961 cctgatggaa atcctgacga tggcggatgc actgaagcgt gcttcggcag gtcgtattac
    13021 cacagccatt ccgtatttcg gctatgcgcg ccaagaccgc cgtccgcgtt ccgtccgcgt
    13081 tccgatttct gccaaactgg tggcaaatat gctgtattcg gcagggatcg accgtgtttt
    13141 gactgtcgat ttgcatgccg accagattca aggtttcttc gatattccgg tggacaatat
    13201 ttatgccacc ccgattctgt tgaacgacat caaacaacag cggattgaaa atctgaccgt
    13261 cgtcagcccg gacatcggcg gtgtcgtccg cgcccgcgcc gtggcaaaat ccctgaatgc
    13321 cgacttggca atcatcgaca aacgccgccc gaaagccaat gtggcggaag tcatgaacat
    13381 catcggcgat attcaaggta gaacctgtct gattgtggac gatatgattg acactgcaaa
    13441 tacgctgtgc aaagccgccg tcgccctgaa agagcggggg gctgaacgtg ttctagccta
    13501 tgccagccac gccgtattct ccggagaggc ggtcagccgt atcgcctcat ccgaaatcga
    13561 ccaggtggtc gtaaccgata ccattccttt gtctgaagcg gctaaaaact gcgaccgtat
    13621 ccgtcaggta acgattgccg gtctgttggc cgaaaccgtc cgccgcatta gcaatgaaga
    13681 atccgtctca tatcttttca atgaagaagt gatgacaggc agcatgttgc tgccataagc
    13741 ccgaagccgt cttaagctgg tcgcggccga tgacggtagt tttatttaaa ttggagtatt
    13801 taacatgact tatgaaattc aagcctctgt tcgtgaagca caaggcactg gtgcgagccg
    13861 ccgcctgcgt cgcgaaggcc aaatccccgg cattttgtac ggtgaaggcc aagagcccgt
    13921 tgcaatcgct gtggatcaca aaactgtatt ctacgcattg gaaaaagaat ctttccatac
    13981 tgcgttgatt aaattgtctc tgaacggcga aaccaaagac gttatcgtcc gcgatttcca
    14041 aatgcacccg ttccgccgcg aagtccaaca catcgacttc caagctgtga aagccgatca
    14101 acttgtacgt atccgtgttc ccctgcacat cgttaacgct gaaaattccc aagcggtcaa
    14161 actgcaaggc ggccgcgtat ctctgttaaa cacttctgtt gaagtagttg ctttgcctgc
    14221 caacatccct gctttcttgg atttggattg tgccgaagtg gttgccggcg acattctgca
    14281 cttgtcagac atcaaactgc ctgaaggtgt agaaagcgtt tccctgaaac gtaacgaaaa
    14341 tctggctgtt gccactgtta ccggtaaaaa acgctaattg atttcagcag cagggcggcg
    14401 cgtatgcaat acgtaccgcc ctgttgtttt atgccgtctg aaccgtgttt cagacggcat
    14461 ttctttattt gttggaaaag cgggatattt gaaacggcgg attactgccc tgtcagacgc
    14521 gtccaaagcc tttgccaccg gcttcttttt tctacatttt ccagtgcgac aatttctttt
    14581 tcggcaatgg tgtatccgtt ttgtctgatt ttgatttttc ctaggacctg cccttttttt
    14641 accggggcgg gaatcggctg tatggtttcc aaaatctgtt ctgccatttt cgcttcctta
    14701 tgtggcagag tgatgtaggc ttctttgagg aagcctgcgc ggacggtttt tttgctgcct
    14761 ccggaaattt ggatttgggc aacggttttg cctttcggat atattttggg cgtatcgaag
    14821 gcctgcaatg cccagttcag cagcttgctg ttgtctgatg cgcgtgtttc cgccgattcc
    14881 gaacccaatg tgatgacaag gatgtgcctg ccgttgccgg agtatgacac ggcaaggttg
    14941 tagccgccgc tttctgtgtg tccggctttc agaccgttta cattgttgtc cctatataaa
    15001 aggatattgc ggttgttttg ctctatattt ttgaatttga aagatttgat ggaaaacagc
    15061 gggtaatatt ccggaaagtc gcgcatcaat gcttcagaca gctgggcgag gtctttggcg
    15121 gtggaaacct gtccttctct actcaagcct gtcgggtttt tgaatacagt gttcttcatg
    15181 cccaagcgtc gggcttcttt gttcatttgt tgcacaaaat tttcaatcga gccgttgccc
    15241 agccggccgg caagggttag ggcggcatcg tttgcggata gtgcaatcat gccttttaag
    15301 agtttgtcgg tgctgaccgt atcgccggga cgtacaaaca ttctgcttcc ttctgaagcc
    15361 catgcggatt cgggtatttt taagttttct tcagattgga tatttcccga tttcatgttt
    15421 ttgaaaacca aatatgcggt catcagttgg gttagtgccg ccggttcgac aggggtattg
    15481 atgtttttgg cggataaagt ctgtctgctt tgaaggtcga taacgatgtg tgccgctgtg
    15541 agggtttcgg gtgtttggag cgtgggggcg gcgtgtaccg tcagtttgtt gggcgcgggc
    15601 gatgcagccg ttgtgtgaga aacgcctaag atgatggaaa gcaggacggg caggatttta
    15661 tgtgctgtca tgaaatattc taattgtgtg cgtgtttcag tctgccgatt atacgcttag
    15721 ggtgtctgat cgggcggatt tttcttgctt tcgcgccgtc ttgggcgtat ggttttgggt
    15781 tttgcgattt taataaaccg attatcccat attgaattat gaacacgccc cttccttatt
    15841 ccaattacct catccgcatc ctgacggcat ctgtctatga tgtcgcggtc gaaacgcctt
    15901 tggaaccggc acgcagcctt tctgtacgtt tgaaaaacaa catccttttg aaacgcgaag
    15961 atttgcagcc ggttttttcg ttcaaaatac gcggcgcgta caacaaaatg tccaagttgc
    16021 cgaaagatgc gctcgcttgc ggcgtgattg cggcaagcgc gggcaatcat gctcaaggcg
    16081 tggcattgtc cgcacagcgt ttgggttgcc gtgccgttat cgttatgccg gaaactacgc
    16141 cgaaaatcaa agtggatgcg gttaaaagcc atggcggcga ggtggttttg cggggcgttt
    16201 catacaacga tgcctacgat tatgcgatgg agttggcgga aaaagaaggg ttaacctata
    16261 tcgcgccgtt tgatgatcct gatgtgattg cgggacaggg gacggtgggg atggaaattg
    16321 tcagccagca tcccgatcca atccgcgccg tattcgtacc gataggcggt ggcggtttgg
    16381 cggcgggcgt ggcggcattt atcaagcagg tccgccccga aatcaaagtt atcggcgttc
    16441 agaccaacga ttcctgctgt atgaagcagt cggtcgaagc gggtgaaatc gtccatttga
    16501 aagatgtcgg gctgttttca gacggcactg cggtcaaagt cgtcggaaac gaaaccttcc
    16561 gcctctgcaa agaacttttg gatgaaatca ttacagtcga taccgatgcg gtttgcggcg
    16621 cggtcaagga tattttcgat gacacgcgca gcattaccga gccggccggc gcgttggcgt
    16681 tggcgggtct gaaagcctat attgcccgag aaggcgcgga aaaccaaacc ctgattgccg
    16741 ttaccagcgg tgcgaatatg aattttcacc gtttgcgcca tgtgtcggaa cggagcgaat
    16801 tgggcgaggg caacgaaggt atttttgccg ttaccatccc cgaagaacgc ggcagcttcc
    16861 ttaagtttat caatatattg ggaaatagga atattaccga gttcaactac cgttacggag
    16921 atgatgaaaa agcgcatatc tttgtcggtc ttcaagcggc aggcccgcag gatttggcgg
    16981 ttatcggtag ccggttggat gaggcgggat tgcccaatgt cgacctgacc gatgatgaga
    17041 ttgccaaaat ccatatccgt tatatggttg gaggacggac ggacaaagta gaaaacgagc
    17101 gtttggtcag ttttgagttt ccggagcgtc cgggggcatt ggcacgcttt ttgaaccata
    17161 tgcagggagg gtggaacatt acgctcttcc attaccgcaa ccacggtgcg gattacgggc
    17221 ggattttggt cggtatcgat gtgccgccgc acgatgccgc cgcatttgac ggtttcttgg
    17281 aaagtctggg atacagctat cacgaggaaa cgcaaaatgc cgcgtacaag ctgtttcttg
    17341 cctgacgctt gaaagcacaa tgccgtctga aagcctttca gacggcattg cgctttcatg
    17401 gttaaatcga atattcaatc agttcgtttt gagagaagac ataaacctgt ttcggaatca
    17461 gcttcaattc tttgccttcg gcgattgggt aacgcgcggc atcgctgcca gccagcgtga
    17521 tatgcacgtc ttgtttgccg tgtttcacca aaatatgcgt caatgccccg acggcgtgga
    17581 ctttttcgat ttcggcacaa atcatcggtg tttcgtgttc ggcggcgatc tgccattcgt
    17641 gcggacggat gtagccgatg gcggtttgct cctgccattt gtattgtgcg ttcaatttcc
    17701 acgcgaagcc gttataatgc cagaagcctt tttcgatgcg tccttcaaat gcgtcggttt
    17761 cgccgaggaa ctcggtaacg aaggcatttt cgggtttgcg gtaaatagct tcggcgctgc
    17821 cggtttgttc gattttgccg tggttcatca cgacgatttc gtcggaaact tcgagggctt
    17881 cttcttggtc gtgcgtaacc agaatgctgg ttacacccag gttgtgatgg atatcgcgca
    17941 gccaggtgcg taattctttg cgtactttgg cgtccaacgc gccgaagggt tcgtccaaaa
    18001 gcaggagttt cggttcgacc gcaagcgcac gggcgagggc gatgcgctgg cgttgcccgc
    18061 cggagagttg gtgcggatag gattttgcca aatgcgagag ttgtacgagt ttcagcaatt
    18121 cttcgacttt ggcgcggatt tgtcctttgg acgggcgttc ggacttgggc aatacggtca
    18181 aaccgaaggc aacgttgtca aacacgttca tatggcggaa aagggcgtag tgttggaaca
    18241 cgaagccgac tttgcgctcg cgcacgtgct tggcggttac gtcttgccca tcaaacagaa
    18301 tcttgccgcc atcggcgttt tccagtccgg cgatgatgcg caggagcgtg gttttgccgc
    18361 agccggaagg gccgagcagg gaaacgagtt tgccggtggg gacgttgagg ttgatgtttt
    18421 ttagcgcgtg gaacgctccg aagtgtttgt ttaagttttg gatggtgatg ctcatgctgc
    18481 gttcctttcg gcggcggcga gttttttatc ttgtaatttg gtgatgatgt tttgtaccag
    18541 caatgtggcc aaggctaaaa gtgccaatac gccggagagg gcgaatgcgc cggtaaaatt
    18601 gtattcgttg tagaagattt cgaccaaaag cgggatggtg ttggtctcgc cgcgtatgtg
    18661 tcccgatacc acactgaccg cgccgaactc gcccatcgcg cgggcgttgg tgaggatgat
    18721 gccgtagagc agcgcccatt tgatgttggg cagggtaacg cgccaaaaca tctgccagcc
    18781 gcttgcgccg agtatcaatg ccgcctgttc ttcgctgtcg ccctgagcct gcatcagcgg
    18841 gatgatttcg cgtgcgacaa aggggaaagt aacgaacagc gtcgccagaa taatgccggg
    18901 gatggcgaag ataatctgta tgccttgcgc ttcgagccag ccacccaatg ccgtgtgcgc
    18961 gccgaacaat aagacgaaca ttaaaccggc caccacgggc gatacggaaa acggcaaatc
    19021 gagcagggtg gtcagcaact gcttgccgcg aaaatcaaaa cgggtcagca gccacgccat
    19081 cgccacaccc aatacagcat tgacgggaac gacaatcagc gcggtaatca gcgtcaattt
    19141 gatggcagac cacgcttcgg gatcgtttaa ggatttcagg tacaaatccc aaccgccttt
    19201 taaggcttcg taaaacacgg cgacgagcgg cacgaccagc atcagcagca gaaagcccag
    19261 cgcggcggca atcagcaaca cgcgcagccg gcgcggttcg gtcaggttgg gattggcgga
    19321 atagggtttc atggcggtgg tgttccccgg ttggttgttt taaggtgttc ggatgccgtc
    19381 tgaaaaaccg ttttttgtgg ggcggattcg ttttcagaca accttttatt gattaaggga
    19441 ataaaaacgt ctagctaccg tcattcccgc gcaggcggga atccaccgca gggcaacagg
    19501 aaaacagaaa ataaataagg cagccgaaat tcaccaatgg attcccgcct gcgcgggaat
    19561 gacggtaaca ggtatttcag acgacctcaa cccttcgcgc ccgaacgcct gcccaacgcc
    19621 cactgcatca cgttcagcgc aaacagaatc acaaacgaaa ccagcagcat aaacaacgcc
    19681 accgccgacg cgccctgcac gtcgaactgt tccagcttgc ccgtaataat cagcggcagg
    19741 atttcagaaa ccatcggaat attgcccgcg ataaaaatca ccgagccgta ttcccccgtt
    19801 gcccgcgcga acatcattcc cgcgccggtc aagagtgccg gcgtgatttc cggcagcagc
    19861 acgcggcgga acgtcgtaaa gcggtttgcg cccaaagtcg ccgccgcttc ctcatattcg
    19921 cccgataatt cctccaacac cggctgcacg gcgcggacga taaagggcag gctgacgacg
    19981 accagcgcaa tccaaatgcc gacgggcgta aacgcgattt tgatgcccaa aggctcgaaa
    20041 aaacggccta tccaaccgtt aggcgcatac agggttgcca acgcgatacc cgtaaccgcc
    20101 gtcggcagcg caaacggcaa atcaaccagc gcgttcgcca agcccttgcc cggaaattca
    20161 tagcgcacca atacccacgc caccagcgtg ccgaacacga cattggtcag catcgcataa
    20221 aacgacatcc gcaaactcag ccagacggcc gccaatacgt tcggctcggc aatcgtgttc
    20281 caaaagccgc cccagccgat ttcagccgcc ttcgccgcca tcatcgcaaa cggcaaaacc
    20341 accagcagcg acaggcacaa tacggtcaga ccaaggctga gtttgaagcc gggcagtacg
    20401 ccgggcgttt tgagcagtaa cataaaacaa tgctgaaaat aaggaaaagg aaggactact
    20461 ttaacgatgc cgtctgaaaa acggaaagaa tggaaagttt ggtgcaaaga cgaatttgtt
    20521 ataaagcggt tggcagtttc tcaagcgggc gcgatgtttt aaaatatagt ggattaaatt
    20581 taaatcagga
//
LOCUS       DAWGBY010000023        20463 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.023, whole genome shotgun sequence.
ACCESSION   DAWGBY010000023 DAWGBY010000000
VERSION     DAWGBY010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20463
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.023"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(209..284)
                     /locus_tag="WHG62_000755"
     tRNA            complement(209..284)
                     /locus_tag="WHG62_000755"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(249..251),aa:Asn,seq:gtt)
     gene            complement(377..736)
                     /locus_tag="WHG62_000756"
     CDS             complement(377..736)
                     /locus_tag="WHG62_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ1724893.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(759..1403)
                     /locus_tag="WHG62_000757"
     CDS             complement(759..1403)
                     /locus_tag="WHG62_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ1724894.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADV
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1405..1941)
                     /locus_tag="WHG62_000758"
     CDS             complement(1405..1941)
                     /locus_tag="WHG62_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ1724895.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1953..3050)
                     /locus_tag="WHG62_000759"
     CDS             complement(1953..3050)
                     /locus_tag="WHG62_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ1724896.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3053..4489)
                     /locus_tag="WHG62_000760"
     CDS             complement(3053..4489)
                     /locus_tag="WHG62_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ1724897.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQYADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4709..5491)
                     /gene="bioC"
                     /locus_tag="WHG62_000761"
     CDS             complement(4709..5491)
                     /gene="bioC"
                     /locus_tag="WHG62_000761"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ1724898.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMTHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCNVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFITHCKTGLKTNGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQAWLAKDFELLWCEDFTVILDFDTPSDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFGMPSGKVRLTYHPLFFIARYSAAGRQ"
     gene            complement(5479..6126)
                     /locus_tag="WHG62_000762"
     CDS             complement(5479..6126)
                     /locus_tag="WHG62_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ1724899.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCT
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFGEIHQELIALFAMIGQDRR
                     TDLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDVGHYLFSRFTHWSALWNH"
     gene            complement(6136..7278)
                     /gene="bioF"
                     /locus_tag="WHG62_000763"
     CDS             complement(6136..7278)
                     /gene="bioF"
                     /locus_tag="WHG62_000763"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ1724900.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENCKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEAALAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAVCL"
     gene            complement(7300..7437)
                     /locus_tag="WHG62_000764"
     CDS             complement(7300..7437)
                     /locus_tag="WHG62_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HEZ1724901.1"
                     /translation="MATETNVAEISALDYEGRGVAKVGGKTVFIKRALLDCLMLGWFR
                     L"
     gene            7501..8577
                     /locus_tag="WHG62_000765"
     CDS             7501..8577
                     /locus_tag="WHG62_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ1724902.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8784..10250)
                     /locus_tag="WHG62_000766"
     CDS             complement(8784..10250)
                     /locus_tag="WHG62_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ1724903.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10448..11371)
                     /gene="speB"
                     /locus_tag="WHG62_000767"
     CDS             complement(10448..11371)
                     /gene="speB"
                     /locus_tag="WHG62_000767"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ1724904.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEVHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11470..13362)
                     /gene="speA"
                     /locus_tag="WHG62_000768"
     CDS             complement(11470..13362)
                     /gene="speA"
                     /locus_tag="WHG62_000768"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ1724905.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVCPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTQQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13529..13813)
                     /locus_tag="WHG62_000769"
     CDS             complement(13529..13813)
                     /locus_tag="WHG62_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ1724906.1"
                     /translation="MKKLLLAAVVSLSAATAFADDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13964..15772)
                     /gene="aspS"
                     /locus_tag="WHG62_000770"
     CDS             complement(13964..15772)
                     /gene="aspS"
                     /locus_tag="WHG62_000770"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ1724907.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYAEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKVAETKEA"
     gene            complement(15830..16531)
                     /locus_tag="WHG62_000771"
     CDS             complement(15830..16531)
                     /locus_tag="WHG62_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ1724908.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLHVKTL
                     AGPMPSEKAELPEQQ"
     gene            complement(16674..17822)
                     /locus_tag="WHG62_000772"
     CDS             complement(16674..17822)
                     /locus_tag="WHG62_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ1724909.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPTVSAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17983..18246)
                     /gene="rpsT"
                     /locus_tag="WHG62_000773"
     CDS             complement(17983..18246)
                     /gene="rpsT"
                     /locus_tag="WHG62_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ1724910.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18549..19691
                     /locus_tag="WHG62_000774"
     CDS             18549..19691
                     /locus_tag="WHG62_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1724911.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5270 a         5279 c         4755 g         5159 t
ORIGIN      
        1 gcgagccaat gccgtactgg tttttgttaa tccactataa aatcgagttt atcctagttg
       61 tccaggacag cccctatttt ttcataacca tcacgaaagg aattttgcaa agattttatt
      121 ccatctcaaa acaatcatct caaaaatgcg tttctgaccg ccggtaaaac aaaaccctct
      181 aagaaaatac ttagagggtt ttgaaatttg gctccccgac ctgggctcga accagggacc
      241 tgcggattaa cagtccgtcg ctctaccgac tgagctatcg gggaataagc gcgaataata
      301 aaacagaaat accgaacgtg tcaatataaa ttgacaatcg attgcacttt atctgcaagc
      361 ccgcaatctt tatatgttat atggcttccg caatatgcct tgccgcacgt ttggcatcca
      421 ataggattaa accaagtctg ccggtttctt ttgccaccag caccaacacg gcatctttac
      481 ccgcctgact taaaaggata tagcctgatt ttcctttaat catcacttgt tccaattccc
      541 cgcaggcgag ttcctgcacc gagcgactcc ccaaagcaag caaagtggca gaaatcgccc
      601 ctaccctgtc cgaattcaaa tgtgaaggaa gcattgtcgc catcggcaat ccgtcggttg
      661 agataacggc agacgcgata atatccgtag atgtattgtt taaatcttca aggattgaaa
      721 tcaataattg ctgcataacc cctcctctct cccaagtttt acacgcggtt gctgtaacgg
      781 cggtataaaa tccttaccaa agtaacaaat gcctctttgc ccaaatcggg aatgccgccg
      841 ataaccaaaa taaatttggt tgaaccgata tacaatggga aaaatgtcaa ttcgctctga
      901 ccggaaggat cgcaaacgcc ccaagcgtta ttgttgatat acaggttgtt cttaatcagc
      961 agccggtatt tcttttccat ctgtgcgact tctgccgcca acaaccccaa ctcttccgcc
     1021 gcctcatgat ggaaattggc gttggcaaga tacagaccgt tccgatcgac caataacgcc
     1081 ttaccgctgc cggacaattg ttccatcagc aacggcaatt gctcgtccga caaattgatg
     1141 ccgtctgaat gaccgttttc atcgccatag aggaattcga gtttttgcaa acggtacaac
     1201 aggttcaaag cggtatcgat gtcggcggtg tccgcccagg taagcagctt ctcactgctg
     1261 accatttcgt ccacatccgc tttcaacagg ctgtgcaaca aagttttacc ggcactgggg
     1321 gcatcgctgg atacggcata aaatgcaccg gcaggagtca ggcggggata taaatttgct
     1381 tgtagtgaaa gtgttgattc catattaaac ctccagtccc ggatcaatag aaaataacat
     1441 tgcgctaacc aattgtttta cgtcatcttc cttacgggca tcaatttcaa aaaccggaac
     1501 attaagatta tgttttgcaa gatatttgtg atacacgtcg ataccgggct gagagcgtat
     1561 atccatcttg gtaataccga caacgacggg tgccttctcc agcagccctc gaaacgaatg
     1621 taaaaagaat tccaaatctt tcaacggatt ggttcgggca ttatctaaaa gcaagaccaa
     1681 acccatactg ccttggctta agatttccca cataaagttg aaccgttcct gaccgggcgt
     1741 accatataaa tggactttgg tatcctcatc caagctgatg gccccgtagt ccatcgccac
     1801 tgtcgtattc cttttcctat ccaaagtcat atcggatgcg gaagcatcgg tctgaacgag
     1861 tgcttcgtcc gaaatagccg caatggcagt ggttttccct acgccgacag gtcctgtgaa
     1921 aataatttta ttttctctca tctctccgcc tcttagctgc ccaacagttt tttcatcagc
     1981 ctttgcagaa ggccgcgcga ctgggattgg gatggtgttg tgattttttc cgcttttttc
     2041 atcatttcac tatcagaggc agaatcggct ccgatattta ttttatccgc catatcggag
     2101 tatgcctgtt gtgaaaccgt ttttaaatct accgacaaaa acccggttgt ataggttgcc
     2161 gcaagataat tcagaatatc attgaggttt aaaggcatca ctttatacaa cacgttaagg
     2221 ttgacggatg ccttggtcag aaatgccgac aagcgtatcg accccggcac atttgccaac
     2281 cgggtcaggt ttggccaaga tttcaacgta aacggagtat cgggagaaat cggataaatc
     2341 aacctgccct gcgccgtcca aatggaaaac tgccacatac aggacataat gcctacttta
     2401 gccttttcgc gccattgcgg gttatcggga acagtcttgc agctgacctg caaattttcg
     2461 tctttgcaca attcttcgag tttttgcaca ctttctgtca gcaaaacccg ttgtatcgag
     2521 gggaaaacaa taaggaccgg cttatttcca tgcaagatag cgatgtcctg cctgttcttt
     2581 tccgcaaacc gcaacgcccc caataatcct ttattcgggt taaactggcg tatcgtaacc
     2641 gtacgctgca cattcccgtt atttttcgcc gaccggtctg cgggtgcaat aaacgatttc
     2701 ccataaacat tctcgccctg caacaatttg cggagcatag gaaacaatgt ttcaaaccga
     2761 atcggtttgg gcaggtaggg aacttcagaa tcgggaactt tctccgaaca gacggcgacg
     2821 ggtatatcct tataacgctc ggcaagctct ttccaaagtt caaaaccgcc ctcggcatcg
     2881 gtatccgcca aaaccaaatc gggcacggca ctgccgtctg aaggggatac tgtttcataa
     2941 cgggtggtat tgtgcatttt gaatgccatt ttgaaaacgg attcctgctg cgccgtcatc
     3001 cccgccaaca ttacgcgtac tgttttaatt ttcggcagtt gaacttccat ttttattttc
     3061 cgtaccgttt tattttttta atattttgat tcatacgctg cagcagccgg ctcatcagca
     3121 taacgacctc ttcaggaagc ctgtccgcac gttccctcaa tacccttaaa aactgcccca
     3181 acctatccca atcttcagta cgttcataaa tatcgatcaa cgtaatataa agctgggact
     3241 cgtcgggata tttcaatacc gcctgctcca acacatccat tgccgcttca atctgaccat
     3301 acatcagcaa cgactctact tccttaaccg catcgtctgc cggagacgaa ccggtgttga
     3361 tcaacgaaga atcttgaagc accaaatccc gatgttgcga tttgaatttc tgtatatttt
     3421 tcggcagata cccgtgcccc ataccgatgt ctttgatttg ccggtcgttc ggcccttttt
     3481 ccaaatcatc gaaaacttca tggtaaccca ggctgtaccc ccaccccagc atccgctctt
     3541 taacctgcct gccgtagttg cccaacgttt ggtaaagttt ccacaaatgt ccggcaaaac
     3601 ggtctatgtc cgcgtattgg taatcgagtt tcaacgcatc gataatcagg tttgcaggtt
     3661 tttcggaagt ttggatggca cggtcgtatt gtttcgatgc cgtttcatag ctgactttgt
     3721 ctttaaggat tttcgcacct tgatcggcac ggaccaaacc ggcaatcgca ccgatttcct
     3781 cttgactgat tccggacacg tcttttttgc cccgcacaat cgggatgcgc ttgatttctt
     3841 cggcttcata agccttaccg ccggcatccg gcgggggcga tgcggaagct gccgtcgcag
     3901 aaccgccttc cgcacgtttt tcaatctcct gagtacccca tcccaaacct tcttccgcca
     3961 agacgcggat acgcaaatgg tttgaatcgc gctgtaatgc ctgttcgata tattttgcca
     4021 aaagttcgga aggaatcagt ttgccgtatt tttgcagatt gtctgccaaa acatcgacat
     4081 cccccacttc gagattgata tcgagcagct cgcggataag gttttcaggt ttcgcttcac
     4141 catccggaat gccgtccaaa taggcagcca aagattcggc agccttgccc tgataaccga
     4201 attgcttata aacctgatac tccgtaagcg gatcgacttc ttgcgcggat acggcggcgg
     4261 atgcggtctc ggcactttcg ttccaagacc agtcgggttg cgtgccgtct gaaaccgatt
     4321 gtccaatctg atcgacccag tccgaatcat tgcttccggg tgtctgcccc tgcgtattgc
     4381 cgacaccttg ggatttgcgc ttcggtgttt tcttaccctg cttcgcacgc ataaccaaaa
     4441 gcatcagcaa taccgccagt gccaaaccga taattaatga gttttccaaa ggatactccc
     4501 gataccgtaa cgagcggata gctgaccgcc tgcaacggcc attgtccgct tttattatta
     4561 acgatttact gaaatagact tgtaagtttt aaatcatacc ataatttaac gtttaacaat
     4621 atgccttctg cacaagcctc gccatattac cttttaccca catcagtatc aatacccgat
     4681 ataaaaataa ctttgcccat aagctgcctt attgcctgcc cgccgcagag tagcgcgcga
     4741 taaaaaataa cggatgataa gtcaggcgca ctttgcccga cggcataccg aacgccgaca
     4801 agtaatcgcc aataaatcca ttgagatttt ttcttgtcca atttttttgg ttcgtggctg
     4861 ttacgcctgt atatttaagg tgtttgagta catctgacgg cgtatcaaag tctagtatta
     4921 ccgtaaaatc ctcacaccat aaaagctcaa aatctttggc taaccaagcc tgccattggg
     4981 ataaagtcgg gtaatttaag cctatatttg taatttggcg gacttctttt aaattgtctt
     5041 tgccaaaggt tgcaaccgcc aataatccgt ttgttttcaa gcctgttttg caatgggtga
     5101 taaaagcgtc gggttgatga aaccattgca cggcagatgc gcttgcgatt aagtcaaatt
     5161 gtcgttgaaa aggaaagttt tccgcatcgc cgcaataaaa atcaaaggat tgcggcagtt
     5221 tttcagccag ttggggctgc acattgcaca aatcattaaa taaccaataa ttcgctgaaa
     5281 tctgtttttg cagcaaggca ctcaacattc ctgagccgca gcccaattcc aacacgtttt
     5341 ccaatggcat atccggcaaa taatcttgca aatgcgtcat taaattaatc gtcatttttt
     5401 gttggattaa ggcgtgccgg tcataatcgt ttaatgcttt ttggaaagcc tgccgaatgc
     5461 gcgatttatt tatggcagtc agtgattcca tagtgccgac caatgggtga atcttgaaaa
     5521 caggtaatgt ccgacgtcaa tttcccgaac ggtgcaacgc ggtgtccaat atcggtgctg
     5581 attggcaggc ataaaaattt tatcgcccga tccgaccaag gcatttgtcc agcggataag
     5641 atctgtacgt ctatcttgcc cgatcatcgc aaaaagtgcg ataagttctt gatgaatttc
     5701 gccaaacggg cgtgcgggaa attgttggta atcttcaaaa gatgctttat cgccacacat
     5761 tctgcgttca aattttaaac gggtgttttc cgtgaggttc tccaatgtgc ctttaaaaac
     5821 ggtgcaaggg ataccgaaat tatcatcgca aggcaaacct gtgccattca ctgccgttgc
     5881 ggattttaat cttattcctt gcaatgccct ctctgccgcc caaacgccca ttgaccacgc
     5941 caccaaacgg atgtgccgat aggcggaaaa atcaaaatcc aaatttaaat cttgataatc
     6001 atagcaaatc aataaatcgt gattttccgg caaaatcaaa tgatttacag catcgggcgg
     6061 cgttccccaa cctgcaaaat acaggattaa atgtccgcct tgatgattgt aaaattttgt
     6121 tttcatatca tatccttaca ggcacaccgc aaactgccgc acttcatccg ttgtcatatc
     6181 tgccgttaaa gacaggcgga ttctggatgt gtttttgggt actgtcggcg gtctgatggg
     6241 caggcaataa taaccctgcc tttgcagata ttccgctttg gcaagggcgg cttcattccc
     6301 gcctaaaata taggggacga tacaggtttg gctcggcatt atttgcgtcc gatgcgccac
     6361 ttcccgccgt aaaaatgcac ttaactgctc aagatggctt ctttcttttg agaattgcgg
     6421 caatcgttca aaaataaaat aagtccaagc cacattaaac ggcggcaatg cggttgaaaa
     6481 aatcaatggg cgcatttgat taatcaaaca ttctttcaat acttggttgc agacggcata
     6541 cgcccccacc gaggctaagg ctttaccgaa agtgccgacc agtaaatcaa tctcggcaat
     6601 caaattatcc cgttcggcaa tccccaatcc gttttgccca taaacaccga ttgcgtgggc
     6661 ttcatccaca taaagataag tattgggaaa ctgttttttt aattggacaa gctgtttcaa
     6721 atccgccaca tcgccgtcca tactgaaaac agattcggta acgataaaag tgcggtcaaa
     6781 ttttccgacg tttttttcaa gcagattttt caaatgttca taatcattat gacgataacg
     6841 gaaaaacgca caccggctca aacggatgcc gtcaatcata ctggcgtgaa caaatttatc
     6901 tgccaaaatc aaacttttcg tcgtcgtcaa agcaggcaaa ataccgagat tggcgtgata
     6961 gccgctgttg aacaataacg cgctttcccg ttggaaacgt tgtgcgacaa gctcttccaa
     7021 atcggtataa ataggaaagt tgcccgttaa taaacgcgat gaagaactgg taaaagaggg
     7081 aaaattaccg ccgtattgct gcaaaaaaga ccggcgcaag ttttcatctg atgccaaacc
     7141 caaataatca ttagacgaca tattcagcat tttgcagttt tcccgcgtaa tataccgccc
     7201 ttgatgaatc aaatccggaa tcgaacgata ttggttttgc gcgccgagtt gttcaagctg
     7261 ttgtttaaaa accttcatta tgatgtaaat attcctgagt taaagcctga accaacccag
     7321 catcaaacaa tcaagtaatg cccttttaat aaaaaccgtt ttgccgccga cctttgccac
     7381 acccctgcct tcataatcca aggcggaaat ttccgcgaca tttgtttccg ttgccattac
     7441 ccaatccgtc cgcactgtac cgaagcgcat attttcgcac aaattggtac ggtttcaggt
     7501 atgatttgcc gaaaacctat cggacacaca ccatattttg atatgaataa aacaatctgc
     7561 cgcactgctg cactattgat aagcggtttt tcatacgcaa acaccgtcat tcccgatgtc
     7621 tcccccgtcg cacaaggtca acatgtcttc attaacatcc ctcagcaacg cctgttcctc
     7681 tacaccgacg gcaaactgac caaggtttat cccgttgcag taggtcgggc gatgacgcaa
     7741 accaatctag gcgaacataa aatcggtgcg aaagcctata accctgtttg gtacatcccc
     7801 aaatccatac agaaagaacg cggcgacggc gtaaaaacca tagccgccgg cccggacaac
     7861 cctttggggc cggtttttgt ccgcttaggc gaccccaaac tcggtttggg catacacggg
     7921 accaatgcgc cggccagcgt ccccggggtt cggagtcacg gctgcgtccg catgaaatcg
     7981 cccgacgcgc tcgagtttgc caaaaccatc gccagcggct cgcccgcctc cgtcatctat
     8041 caaatggcgg ggctcaatga agatgcggat cgcaacctgt ggcttgccgc cttccgcgac
     8101 ccttacggta agaacaacct tgacatcgcc tctctgaaaa aaagtattgc gcaatgggca
     8161 aaaacacagg gtaaaaccat cgcgcccgag aaagtcgatg ctgtactcaa agaccgcacc
     8221 ggatcggccg tctgcctgac ctgcggcaaa aacggcaaga tgaagatgcc gctcaaatcg
     8281 ctggcgtgga tacagggttc ttcctcatac agccaagctg aagtcattga acaaactgag
     8341 gaaaccaact ctgccgaaat atccgagaca cgcacgcccg aagtgcctga tgtacacacg
     8401 cccgaggcac aaccgcattt aaatacccaa tccgacggca cgccgactgc ctataccgaa
     8461 ccggctgccg attcatcgcc gcaagtagaa acacctgatc aggctgcttc cgagccggtt
     8521 gatgtattat tttcaataga tgtgatacgg cagggaaatt tgcgtttagg taattgaata
     8581 accttctgat tatttaatgc ttatgtttat cagaagttga taggcggttt ggtttttgtt
     8641 tggcttttcc tacaccgccg cctgccgctt tctgcaacat tcaagcgcac aaatatgcca
     8701 tctgaaggct ttagacggca tatttcacga taatagtcgc ccaatcaaat aaacacagat
     8761 tggaaattta ttttattttt cccttaccaa taccccagaa ctttccacca aatgctgccg
     8821 ataacgaaaa aaatcagaaa attgaccacg ctcatgataa aacccgcctt ccaccattct
     8881 cccattgtgg tgtagcccga accgaaaatc acaggcgaag taccggtcgc ataatgagtg
     8941 agggtcatca taatgttgga tgcggccgcc atcatcagcg cggtcggcat cgccggggca
     9001 ttcagtgaaa cggcagcagc gaaaaatgcg ccgaacatag cggtaatatg tgcagtagta
     9061 ctggcaaaca tataatgcgc atacatataa gcaagcacga ggattacgcc cgcagccgtg
     9121 ccgctaacgc ccaaaccgcc gacactttcc gccaacactc cggagaacca tttaatcagt
     9181 ccgagtttat ttaaaaatgc ggccatcata atcaatgcgc caaaccaaat aatcgtatcc
     9241 cacgcgcttt tttctttcaa aacatcgtcc caagtcaata caccggaaag caaaagcagg
     9301 cttaatccga taaatgcggt ggcggtggcg ttgatactaa aagcgtgatt gccggtaata
     9361 agggcgggaa catctgccca caacagcaac aagataccga aaatgaccgc cataatgatt
     9421 tcgtctgccg acattttacc catctccctc agacggtctt tggcaaattg aacggcattg
     9481 ggcgtttctt taatttcagg cggatacaaa aaatataaaa tcaaaggcat aacgaaaaag
     9541 gcgataacgc cgggaacagc cattgcccac gcccacgccc cccaagaaag acggaaacta
     9601 ctgcctaaat tttcggcaat caagttgacg attaaagggt tgggggcagt tgcagtaata
     9661 aacatagccg acgaaatggg attggaatga tagttgacca aagccaaata tttacccatc
     9721 ttgccttctg tgccttttgc gggattggag ccgtaactgc cggcaatcga ctgcataatc
     9781 ggatgtataa tgccgccgcc gcgcgcggta ttggaagggg taacgggagc cagcagcagt
     9841 tcggaaagag cgagactgta accgatgccc agcgtttttc ttccaaaaac ggcgataaac
     9901 aaatatccga tacgcatccc cagccctgtt ttgagcaaac cgcgcgaaat cataactgcg
     9961 atggcaatca gccaaatcaa cggattggcg aacgcactca acgcatcgct catcgccgcg
    10021 cccggtttgt cggcggttac gccggttact gcgaccaacc cgacggcaat aatcgacagc
    10081 gcgcccaacg gcatggcctt gccgataatg gcggcaatca caccgacaaa catggccagc
    10141 agcgtccaag cctgaggctt gaccccgtcg ggtacgggca gtgccaaaac cagggcgcac
    10201 aatactgcgg caatggcgag gggtatcggt ttgaaaccca atttcatcat attgacctcc
    10261 gtaaaaaaga ccgtcccgaa aaatcggaaa aataatattt aactaattgt tttataagat
    10321 atattccgat atttcaccgt ctttccgata tgcggctccg ggcaactttt gtttcagtat
    10381 ttgaattttc attagactga atacgccgtt tgaacggcac ggcgaaaacc cgggggatgc
    10441 cggacgttca gtcctttttc gcaccttgaa ggtaaagcat ttccaaggca attgtggcac
    10501 cggccaaagc ggtaatgtcg gattggtcgt aagagggggc aacttctaca acatccatac
    10561 cgacgatgtc gagatccgtc agcccacgta ggatttttaa tgccctgtcg ctgctcaagc
    10621 cgccgcatac gggcgtaccg gtcccggggg cgaacgacgg gtcgaggcag tctatgtcga
    10681 aagtcaggta aacgggcata ttgccgacgg tttctttgat tttacggacg gtctcttcaa
    10741 cactgtcttc attgactttg ggggcggaca acacagtaaa aggcaatttt ttactgtgtt
    10801 cggtgcgtat gccgatttgt acggaacggg acgggtcgat gaggccttcc ttgggggcgg
    10861 tatagaacat cgtaccgtgg tcgtattcgc tgccgttgtc gtaggtgtcg gtgtgcgcgt
    10921 caaaatgaat cagtgcgagt ttgccgaaat agcgggcgtg ggcgcgcaac aacgggaggg
    10981 taatgaaatg gtcgccgccc aaactcaaac agcgtttgcc ggaagaaagt aatttgccgg
    11041 cgtgcacttc cattttttcg acaaaatccc tgctgtcgcc aaaagaaaaa accaagtcgc
    11101 cgcaatcaat aatgttcagg cgttcgcgca catcaaatgt ccatggaaac ctgcggtgct
    11161 cccaagcgag gttgacggag gcgcgccgga tggcttcagg accgaaacgc gcgccggaac
    11221 gccctgaaac cgccatatca taaggcacac cggtaataac ccaatcggca tgactttcat
    11281 acggcataaa attaagcggc aggcgcaaaa acccgaaatt attggaaacg agggagttgt
    11341 cggtttgtcc tgccagtgtg ctgtattgca tcgtaatgat tccttgtaat tggtttcaat
    11401 cggtcgtgat gattggtgtt tgagtaagaa aatcgggctt cagacgacat atccgatgcc
    11461 ttgatgcgtc tattcgtctt ccaaataggt ataaccatta agccccgctt cgagttcttt
    11521 taagaaagac atagcctgcg aggcaggaag gtctgaatgt tcgatttgtt cgcgatagcg
    11581 tttcatcagc tctttcggat cttgataaac gtattcgagc atatcggcaa cggtgtttcc
    11641 ttcatcgtaa tcgatgacgg taaattgtcc gtcttcccct acaacaacat cggcagtggc
    11701 agtgtcgccg aaaagattgt gcatattgcc gagtatttcc tgatatgctc ccaccataaa
    11761 aaagcctaaa agcggcggct cttcttcggg ataatcaggc ataggcatcg taccggcgat
    11821 gccgtctccg tcgatgtagt ggtcaatcgt accgtctgaa tcgcaggtaa tgtccaacaa
    11881 cacggcgcgg cgcgcaatcg gttcattcaa accggtaatg ggacaaacag ggaaaagttg
    11941 atctatgccc caagcatcgg gcaaagattg gaagagtgag aaattgacat acagcttatc
    12001 ggcaaaacgt tcttgcaatt cgtcaataat ggttcggtga gaccggtgtt tttcattaaa
    12061 caattcgccg acttcatgac agatatttaa atacagttgc tccgcccacg cacgttgcgc
    12121 caaactcaac agcccgacat tatactgatt atgcacatcg gcaagatcaa actgcccttc
    12181 gtgtatccag ctgcgtaagg aacgtttttc ccgcgaggcg gaaatatccg tccaagtttc
    12241 ccacatactg tgcaacacac gcggcgcttc gggcgatggc gcatccagcc ggcgcggttt
    12301 gtaacgctca acgcctataa cattagcaac caaaacggcg tgatgtgcgg taatgccgcg
    12361 cccgctctcg gtgatgattg tcggatgcgg cagcccgtgt tcgagacaag cctgactgat
    12421 gccccatacg actgtggcgg catattcgtt gaggctgtaa ttaacggaac aatccgattg
    12481 tgtgcggttt ccttcgtaat ccacgccaag cccgccgcct acatcaaaac agcggatatt
    12541 tacccccagt ttgtgcaact caacataaaa ccgagccgat tcgtgtacac ctgtggcaac
    12601 atcacggatg ttcccaagct gcgagcccaa atggaaatgc aaaagctgca ggcaatccag
    12661 cctgtttttt tgtttcaaaa tatcgaccag ttgcaaaact tgggaagccg acaagccgaa
    12721 ttttgatttt tccccacccg aagactgcca ttttcccgaa ccttgggaag ccagtctggc
    12781 gcgcacaccc aaacggggct tgatgccgag tttttccgcc tcttccaata ccatttgtat
    12841 ttcggacagc ttctcaatca ccaaataaac ctgatgcccc agtttttcgc ccatcaaggc
    12901 gaaacggata tattcacggt ctttatagcc gttgcagacg attaatgttt gctgggtgcc
    12961 ggcgtgtgcc aaaaccgcca tcagttcggc tttagaacca gcttccaaac catgcggttg
    13021 tccgcttgac ataagcgatt cgatgacgcg gcggtgttgg ttgaccttga tagggtaaac
    13081 caaacaataa ccgcccttat agccgcactc ttcccgtgcc gtctgaaagg cgcggttaat
    13141 gtcgcggagg cggtgttcga ggatttgcgg aaaacaaaac aaaacaggca ggcgcgcctg
    13201 atgtttttgt tgcacggctt cagtcagttt ttgcagtgaa acagtttgat tgtgttgcga
    13261 gggattgggg cagacgatga tttcgccgga atcgtcaaca tcataataac ctatgcccca
    13321 atgattaatg ttgcacactt cacggatggt aaggataggc ataataaacc tgctccgtct
    13381 gtcgtgttga aaaggaatga ttataacaaa tcagcgtgaa atgtcatttt tttaataaga
    13441 aaagcctgcc tcatacctga tgaggaacag gcaaaatgtc gtctgaacgc ttcagacggc
    13501 attttggttc atctttccat caaaggagtc agcgatcgag ctgctctttg atgattttca
    13561 ggtcggggta agacaacacg atgtcgtatt cgcggccgtc tttataggct tccacttcca
    13621 aaacaggttt gccccaatgg tcgtcggcat cgacatcgtg aacctgataa ccgcgctgtt
    13681 ccaacatttt tacggctttt gtgcggtttt gttcaaaatg gggatcaccg taaatctgac
    13741 gctcggcaga atcgtcggca aatgcggttg cggcactcag ggaaacaacg gcagccaata
    13801 acagtttttt cattttcagt cctttcttaa tcggttgatt gaataagatg tgtttttcaa
    13861 tgctgccatt aaaacacagc aaaattaggt ttgaattagc aggaagttaa gaagcgtaaa
    13921 tgccgtctga aaaaaacaga gccgtcaaac ggctccgttt tccttatgct tctttggttt
    13981 cagccacctt ttgacgcagg cgcaagctca attcgcgcaa ctgcttgtcg tccacgctgt
    14041 tgggcgcgtt ggtcagcagg cattgggcac gttgtgtttt cgggaaggca atcacgtcgc
    14101 ggatagattc ggcgccggtc atcagggtaa ccaaacggtc gaggccgaat gcaaggccgc
    14161 cgtgaggagg cgcaccgaat ttcaggttgt ccaagaggaa gccgaatttc tcttgttgct
    14221 cttcagggct gattttcagc gcggcaaaca ctttctcttg tacgtctgca cggtggatac
    14281 ggatagagcc gccgccgatt tcccagccgt tcaataccat gtcgtaggca cgggccaggc
    14341 agtttgcagg gtcggaaacc atcaggtctt catgaccttc tttaggcgcg gtaaacggat
    14401 ggtgtacggc aacgtagcgg tcggcttctt cgtcgtattc gaacattggg aaatcgacaa
    14461 cccacaaagg tttccattcg tctgtgaagt agccgttgtc tttgccgtgt tccaagccga
    14521 ctttgatacg caatgcgccg atggcttcgt tcacaacttt ggttttgtcc gcaccgaaga
    14581 agataatatc gccgttttgt gcgccggtac gctcgatgat ttctttcagg gcattctcag
    14641 acaggaattt tacgattgga gattgcaggc cgctgtcttc gccgtttgag aggttgccca
    14701 catcgtttac tttgatgtat gccagacctt tcgcgccgta gatgccgaca aatttagtgt
    14761 attcgtcgat ttctttgcgg ctgaattttg cgccgttcgg tacgcgcagg gcgactacac
    14821 ggccgccttt catatctgcc gcgccacgga agactttgaa ttcttccgtt ttcatcaggt
    14881 cggtcaactc ggtaaatttc aagttgatac gcatatccgg tttgtcagag ccgtagtaga
    14941 acatggcttc ggcgtaaggc atacgcggga agtcgcctaa atctacgttt aaagcatctt
    15001 tgaagacttg tttcgccata ccttcggtga tgtccataat ttcatcctcg ttcaagaacg
    15061 aggtttccaa gtcgatttga gtgaattcag gctgacggtc ggcacgcaag tcttcgtcac
    15121 ggaaacattt ggtaatttga tagtaacggt cgaaaccggc caccatcaac agttgcttaa
    15181 ataattgcgg tgattgcggc agcgcgaaaa actcgcccgg atgaacgcgg ctcggcacga
    15241 ggtagtcgcg cgcgccttcc ggagtggagc gggtcagcat cggcgtttcg atgtcgatga
    15301 agccttgcgc gtccagataa cggcgaacgc ccatagcgac ttgataacgc aggcgcaggt
    15361 tgcgttgcat caccggacgg cgcaagtcga taacgcggtt ggtcaggcga acgttttcgc
    15421 tgatgttttc atcgtcgatt tggaacggcg gcgtggcggc ggcgttcaag acttcgattt
    15481 ctttggcaag gatttcgatt ttgccggaaa tcattttatc gttggtcgtg ccttcgggac
    15541 ggttgcgtac gcggccggta atgctcaaaa cgtattcgtt gcgagcggaa tcggcagcgg
    15601 caaacgcttc gggcgtgtcg ggatcgatca cgacttggac gatgccttcg cggtcgcgca
    15661 ggtcgataaa aatcacaccg ccgtggtcgc gtcggcggtg tacccagcct ttgacggtaa
    15721 cggtttggtc taagtattgc tcgctgatca ggccgcaata gttggtacgc ataaaatcac
    15781 cttttattga tttaaactga aaacagaaaa tgccgtctga acggcggctt tattgttgtt
    15841 cgggcaactc cgccttttca gacggcatag gtcctgccaa tgttttgacg tgtaggtcgt
    15901 cagggatgac catacccagc gaaatcacat atttcaatgc ttcgtccacg ctcatatcga
    15961 gttcgcgcac atcgcttttc tttaccataa tatagtaacc gccggtcgga ttcggcgtgg
    16021 tcggaacata cacggaaaga taatcgccgt ccttcggcaa tgcggcctta accgcattcg
    16081 acacctgacc ggacacgaat gcgattgtcc aaatacccga ttggggaaac ggcacgagta
    16141 ctggtgtttt aaacgaacgg ctgctgtcgg acagcagcga ttcggatact tttttcacac
    16201 tcgaatagat ggacttcaca accggaatcc gccccaacaa gctgtcccac gcggcaagaa
    16261 tctgccggcc caatacgttt gcggcaaata atccggttac aaacaataca gcaatggcaa
    16321 cgataacgcc cagccccggg atattaaacc ccaaaacata ttgcggccgc cattgcttcg
    16381 gcagcaggtt gacgagctga tcggacgcgg aaacgatata ggaaaccacc caaaccgtta
    16441 ccgcaatcgg cagccagacc aaaatgcccg taatcagata tttttttaac gccttggcag
    16501 ctttaccgcc ttcggccgca ggttccgtca tcttgcttga ttccgacaaa gtccgtacaa
    16561 accgcacatt atacgcgttt gcccggattc aaacgaaatt tttatcccgc cccgccaaac
    16621 cgccggcggc ttcagacggc acggcaactt gatataccgt ctgaacacgc ggttcagatg
    16681 ccgtccaagt cgttaaacat caacccgata ccgataccgt tctgcttgtg gttgtagtcg
    16741 atcaggctct cgccgtaacc gtggaatccg cgtaccacgc ctttgagttt gcccttaatc
    16801 ggaaacgtgt aggcggcttc aatcgcgccg tagcccgttt tggggttgta gcgcaatacg
    16861 gaatacacat tctgcctgtc gttcaggcgg tactgcagct tcacgtcgcc ataccccata
    16921 tagtcggcaa tatcgggatt gtcgttttta tcgccgctct gatcgaacgc acgcacccac
    16981 acgcgcggaa tcaccgtcaa tttgccccat tccatgcctg ccatggcgta aatcctgttc
    17041 cacgaacgcg attcgggacg gctctgtccg ttggactggt ggacaaaacc cgcaccgagc
    17101 atacgcagcc tgccgccgaa cggcaaatcc gccttcacag gctgggtcag gaaaatttca
    17161 ggtttgtaat ccgtattgcg gaacggcgcg gatttcctgc cttggttgta aatctgccaa
    17221 tcggatcttt gggtgtagcc gaaccacaga tccgcgcggg ttttaaacaa atcttcggca
    17281 attttgcttt tgaacgaaac ctgcaatttg gtttccgcac gtttctgctg tccgaatttt
    17341 tcctgtacag tcgtaccgcg cgtcggcgaa cccggggcat agttgggcga attgttgtac
    17401 cagagcggca taaggtacat cggattgtgt tcgcgtacgc ccaacagccc gcgcaaatcg
    17461 tttttgtcca agtcgtacat caggctcaaa ggcgtataga tgtcggcggt ttcgcccgca
    17521 ctgtcggcag gaagcgcatc cccgcctttt tcaacaacaa tgaccgcctc gcccttatcc
    17581 aggctgctgc ggacggtttc cgtcagattg agtacggctt tcgactcctg cccttcctgc
    17641 cctgccgaag acggaagctg tgccgcaaaa atcctgtcgt aacacgccaa acgcgtaaca
    17701 ttgtccgtca aagcggcgca ttgcagcgcg gtctctccaa aagcggatac cgtcggcaac
    17761 agtcctgtca aaagaatata gcgcatattc cgtgtattca tctccgcccc cattgtcggc
    17821 atattggttt tcaaacggca ttttatagcg gattcggata aaaaaccgca ccctttccgc
    17881 catttcggga tttagccccc gtaatacaga aaaccccgaa accgtcgggc ttcagggttt
    17941 tccgcttatc gcgtatcaac cgccttggcg gttttgcaaa aatcaagcca gtgcttttac
    18001 ttttgcagac aaacggcttt tgtggcgtgc cgctttgttt ttgtggaaca cgcccttgtc
    18061 ggcgatgcgg tcgatgactt tgacggactc ttggtaaacc gcttgtgcgg cagctttatc
    18121 gcctgcttcg actgctttca atactttttt cactgcagtg cggaatgcgg tacgcaggct
    18181 agcgttgtgg gcgcgttgtt tgacggactg gcgggcacgt ttgcgtgctt gtgcgctgtt
    18241 tgccatattg gaatctcctg gaagaaaaat aaattctgta aacgcgcaat tttaaagggg
    18301 gtttacatta tatgcaagcc ttttctctct atccgcccgt cggacaccct gacagcgcaa
    18361 aaaaacggca aaatcgggca accgttttcc tcccctttta aaaacaggat aattttttag
    18421 gaaaatcagt ccaatatcgc tttgagtttg cacaaattta ctttacaatg cccaaacctt
    18481 gcgccggggt gtttatgggg cgcggggttt tctttttttc caacctcttt catcaggaat
    18541 ctgcccgtat gaaaaaatcc gtattagccg ttttggccgc gctgtctctg gcagcctgcg
    18601 gcggcagcga aaaaaacgcc gtgcaacctc aagcagacgc tgcgtctgct gccaatgccg
    18661 aagccgctgc caccgatact ctgaacatct acaactggtc gaactatgtt gacgagagta
    18721 cggtcgaaga ctttaaaaaa gccaacaatc tgaagctcac ttacgacttg tacgaaaaca
    18781 atgaaacgct ggaagccaaa atgctgaccg gcaaatccgg ttacgatttg gttgtgccgg
    18841 gcatcgcctt cctaccgcgc caaattgagg cgggcgcgta tcaaaaagtc aacaaagacc
    18901 tgattcccaa ctataaaaac atcgatcccg aactcttgaa aatgctggaa accgccgacc
    18961 cgggcaacca gtatgccgtc ccctatttct ccggcgtgaa cacgattgcg attacggcga
    19021 agggcaaaga gcttttgggc ggcaagctgc ccgaaaacgg ctgggatttg ctgttcaaac
    19081 ccgaatacac ccacaagctg aaatcctgcg gcatcgccct gtgggacacc ccgagcgaaa
    19141 tgttcccgat tttgctgaac tacttgggca aagaccccaa aggctcgaat cctgaagatt
    19201 tgaaggcggc ggcggaagtg ttgaagtcta tccgtccgga tgtcaaacgt ttcagcccgt
    19261 ccatcatcga cgagctggcg cgcggcgaca tctgcctggc ggcaggcaac ggcggcgatt
    19321 tgaacttggc gaaagcacgt tccgaagaag tgaaaaacaa cgtcggcatc gaagtgctga
    19381 atccgaaagg catgggcttc tggattgagt cttggctgat tcccgccgat gcgaaaaacg
    19441 tcgccaatgc ccacaaatac atcaactaca cgctcgaccc cgaaatcgcg gcgaaaaacg
    19501 gcatcgccgt aaccttcgcc cccgccagca aaccggcgcg cgaaaaaatg cctgccgaac
    19561 tggtgaacac ccgttccatc ttcccgaacg agcaggatat gaaagacggt ttcgtgatgc
    19621 cgcaaatgag tacggatgcg aaaaaactgt ctgtcagcct gtggcagaaa atcaaagtcg
    19681 gcaccaactg atttgaagca ttaaaaatgc cgtccgaaca tcgttcggac ggcattttat
    19741 attggattga aatagaaccg tcgctcccac ggtcaggatt tcagattgcg gacatctgtc
    19801 agaaaagaca aaaaaccttc cgccgttatt ccctacaggc gaaaatccga tccgttgaaa
    19861 tccggtcgtt ttaaataaat cctcgcagct ttgattttct gtttttccga taacgccgta
    19921 actttgaaac gcgaaagcgg gaatccggtc cgttgggatt ttgcaacttc aaatcaatcc
    19981 gcaaactaaa atcccgtcat tcccacgaaa gtgggaatct agaacacgtc cgcacagaaa
    20041 cctacatccc gtcattcccg cgcaggcggg aatctagaac gtaaaatcta aagaaaccgt
    20101 tttatccgat aagtttccgc accgacaaac ttagattccc gcctgcgcgg gaatgacgaa
    20161 atttcagcga gccgtagggt gggctgtagg gtgggcttca gcccaccaat cccaccaatt
    20221 tcaccgcatc aaaggttttt tggggaatag gcgtgattcg gcggtttcgg ttttcggtgg
    20281 gattgggcaa gatggataac attgacggag ttggagggat aggtggaaac ggtgggattg
    20341 gtgggctgaa gcccacccta cagccagccc tatgtccacg ctgcacatcc tacgcccgcc
    20401 ttgcgtttct tataagcagc attttacgca atactttgcg tccgctgaaa aaatttcaaa
    20461 cgg
//
LOCUS       DAWGBY010000024        19677 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.024, whole genome shotgun sequence.
ACCESSION   DAWGBY010000024 DAWGBY010000000
VERSION     DAWGBY010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19677
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.024"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(49..1218)
                     /locus_tag="WHG62_000775"
     CDS             complement(49..1218)
                     /locus_tag="WHG62_000775"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ1724912.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVTAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1401..1511)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1564..2460
                     /locus_tag="WHG62_000776"
     CDS             1564..2460
                     /locus_tag="WHG62_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ1724913.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLRKEDRERIIANMRQAGMNPDPKTVKAVFAETAKGGLELALAFFKKPEDIETMF
                     KSVHGWEHVQQALDKGEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2504..3568)
                     /gene="tsaD"
                     /locus_tag="WHG62_000777"
     CDS             complement(2504..3568)
                     /gene="tsaD"
                     /locus_tag="WHG62_000777"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ1724914.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPMAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVR"
     gene            complement(3685..4872)
                     /gene="ccsB"
                     /locus_tag="WHG62_000778"
     CDS             complement(3685..4872)
                     /gene="ccsB"
                     /locus_tag="WHG62_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ1724915.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEGKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4865..6817)
                     /locus_tag="WHG62_000779"
     CDS             complement(4865..6817)
                     /locus_tag="WHG62_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ1724916.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKGAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7094..7717)
                     /locus_tag="WHG62_000780"
     CDS             complement(7094..7717)
                     /locus_tag="WHG62_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ1724917.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7923..8552
                     /locus_tag="WHG62_000781"
     CDS             7923..8552
                     /locus_tag="WHG62_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ1724918.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8673..11069)
                     /locus_tag="WHG62_000782"
     CDS             complement(8673..11069)
                     /locus_tag="WHG62_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ1724919.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAINPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11221..12336
                     /locus_tag="WHG62_000783"
     CDS             11221..12336
                     /locus_tag="WHG62_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ1724920.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12339..12938
                     /locus_tag="WHG62_000784"
     CDS             12339..12938
                     /locus_tag="WHG62_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ1724921.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12939..13586
                     /locus_tag="WHG62_000785"
     CDS             12939..13586
                     /locus_tag="WHG62_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ1724922.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13604..14149
                     /locus_tag="WHG62_000786"
     CDS             13604..14149
                     /locus_tag="WHG62_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ1724923.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14168..16429
                     /locus_tag="WHG62_000787"
     CDS             14168..16429
                     /locus_tag="WHG62_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ1724924.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSEPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAAPAKQQAAAPAKQTNIDFRKDG
                     KNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKTPVQKVTLK
                     RLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISL
                     DFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRQ
                     QGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRSILRLDNAD
                     TTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVE
                     AADGFSRDLGVKFGATGKKKLKNDTSAFDWGVNSGFGGDDKWGAETKINLPITAAANS
                     ISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTSIAN
                     GGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTILCISTKNLN
                     TQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFIT
                     PRIMGTAGNSLRY"
     gene            17505..18017
                     /locus_tag="WHG62_000788"
     CDS             17505..18017
                     /locus_tag="WHG62_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ1724925.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            18097..19176
                     /gene="aroB"
                     /locus_tag="WHG62_000789"
     CDS             18097..19176
                     /gene="aroB"
                     /locus_tag="WHG62_000789"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ1724926.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIITNET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMTGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGTLGDISFFEWLEQHMPELMALERAPLIQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAVAAGCVLAA
                     RLSEQLGKISAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT         5263 a         5612 c         4506 g         4296 t
ORIGIN      
        1 aatgccgtct gaactgttca gacggcattt ttgattttca aaccggaatt acagccccgc
       61 tgccgccctc aatgcagcag ctttgtcggt gcgctcccaa gtgaactcag gttcttcgcg
      121 gccgaaatgt ccgtaagcgg cggatttact gtaaatcggg cgcaagagat cgagcatttg
      181 gacgatgcct ttggggcgca ggtcgaaatg ttcgcgaact aaggtaatca gtttttcctc
      241 gctgattttg cctgtgccga aagtgtcgat ggaaatcgaa gtcggttcgg caacgccgat
      301 ggcgtaggaa acttggattt ggcattgggt tgccaaaccg gcggtgacga tgtttttcgc
      361 aacgtagcgg caggcgtaag cggcggaacg atccactttg gacgggtctt tgccggagaa
      421 cgcgccgccg ccgtgcggag ccgcgccgcc gtaggtatca acgatgattt tacggccggt
      481 caaaccgcag tcgccttgcg ggccgccgat gacgaagcgg ccggtcgggt tgatcaggta
      541 tttggtttcg tcggtcagca gttcagacgg caggacgggc ttgataatct gctcaatgac
      601 ggcgtttttc aactcttcat aaccgatttc cgggtcgtgt tgcgtagaga ggacgacggt
      661 atcaatgcgt tttactttgc cggattcgct atcgtaaacc acggtcagtt gggcttttgc
      721 gtcgggacgc agccaaggca ggaggccgtc tttgcgtaat tcgctttgac gctgcatcag
      781 gcggtggctg taatagatgg caaacggcat cagggtcggg gtttcgtcgc aggcatagcc
      841 gaacatcaaa ccttggtcgc cagcgccttg gttcaagtca atgccttcgc cttcgttcac
      901 gccttgggcg atgtccggag attgctggtc gtagtacacg ccgaccgcgc agccgttggc
      961 atcaaagccc agctcggagg agttgtagcc gatgcgtttg atggtttcgc gtgcgacttt
     1021 gatgtagtcc acttgggcgg tggtggtgat ttcgcctgcc aatacgcaca agcctgtgtt
     1081 gaccaaagtt tctgcggcga cacgcgcttt ggggtcttgc gccaagatgg catccaaaat
     1141 cgcgtcggat acttggtcgg caactttgtc cggatggcct tcggataccg attcggaagt
     1201 aaacagatat tcgctcattg agattttcct tgaaaaacaa accatcttct tcagacggca
     1261 tgttgtatga acataatgtc gacagcggga aatatagcaa aatttcccta ttcgtgccat
     1321 ccagttgaga aatattccca tttgaacagc actttggaat ctctgcccgt atgtttcgta
     1381 caggcaaaaa aattcccgca tcaagcgggt ttggattgct ctggtgagcc acatcggctt
     1441 ttcaaccgtc caccttactt ttccttttga aaagcaggtt ggcatggaat tcccaactct
     1501 taatgcagcg cggatggtag cagaaaagcc tttccgccgc aatacttccc tttttcagac
     1561 ggcatgtttc gtttacaatt cgggctgttt ccccctttgc gaaccgccat gcacatcctg
     1621 ttgaccgccc tgctcaaatg cctctccctg ctgccacttt cctgtctgca cacgctggga
     1681 aaccggctcg gacatctggc gttttacctg cgcaaagaag accgggaacg cattattgcc
     1741 aatatgcgtc aggcaggcat gaatcccgac ccaaaaacgg tcaaagccgt ttttgcggaa
     1801 acggcaaaag gcggtttgga acttgccctc gcatttttca aaaaaccgga agacatagaa
     1861 acaatgttca agtcggtaca cggctgggaa cacgtgcagc aggctttgga caagggcgaa
     1921 gggctgctgt tcatcacgcc gcacatcggc agctacgatt tgggcggacg ctacatcagc
     1981 cagcagcttc cgttcccgct gaccgccatg tacaaaccgc cgaaaatcaa agcgatagac
     2041 aaaatcatgc aggcgggcag ggttcgcggc aaaggaaaaa ccgcgcctac cagcatacaa
     2101 ggggtcaaac aaatcatcaa agccctgcgt tcgggcgaag caaccatcgt cctgcccgac
     2161 cacgtcccct cccctcaaga aggcggggaa ggcgtatggg tggatttctt cggcaaacct
     2221 gcctatacca tgacgctggc ggcaaaattg gcacacgtca aaggcgtgaa aaccctgttt
     2281 ttctgctgcg aacgcctgcc tggcggacaa ggtttcgatt tgcacatccg ccccgtccaa
     2341 ggggaattga acggcgacaa agcccatgat gccgccgtgt tcaaccgcaa tgccgaatat
     2401 tggatacgcc gttttccgac gcagtatctg tttatgtaca accgctacaa aatgccgtaa
     2461 cgaaaataaa aatgccgtct gaacaatttc agacggcatt ttgtcatctg acgatttccg
     2521 acagcggcca gcgcggacgg acattgaacg caccgacctc cctgcccttg cccaggtgca
     2581 tcgcaccggc aaaggcaatc atggcaccgt tgtccgtgca gtatgccatc ggcgggaaaa
     2641 acacgctgac tttttcggac ggatgtttcg gcttgccttt gggggtcggg atttgcaccg
     2701 tcatgttacc gaaagtttcg cggagtttgc ggtttgcacc gaccccgccg gcaaccacta
     2761 cggttctgaa ccctgtctgc aacagggctt ttttcacttt cgccgccaac acatcgacta
     2821 ccgcatcttg aaacgcacgg caaatatcgt tgcgggtttg ctcgggaatg gtttccgaac
     2881 cgtttgcctc acgcactttt tcaacggcag tcaaaacagc ggttttcaaa cctgaaaaac
     2941 tcatctgcaa atcgtcggaa tgaatcatcg ggcgcggaaa aacaaacgct tcgggcctgc
     3001 ccgattccgc aagttccgac agtttcgcac cgcccggata cggcaagccc agcagtttcg
     3061 ccgttttgtc gaatgcctcg cccgccgcat catcgacgct ctcgcccaaa agcgcgtagt
     3121 cgcctatgcc cctgaccgcc ataatctgcg tatgcccgcc cgaaaccagc agcgcgacaa
     3181 aaggaaagtc gggtttttcc tccgccaaca gcggcgacag cagatgtcct tccaaatgat
     3241 ggacgggaat aacaggcttg tccaacgcta aagccagcgc gttggcgtag ctcgaacccg
     3301 ccagcagcgc accgcccaaa ccgggcccct gcgtaaaggc aaccgcgtca atgtcgccat
     3361 acgatgcgcc cgcctgcgcc aaacagcctt cagtcaacgg aacaaggcgg cggatatggt
     3421 cgcggcttgc caattccggc acaaccccgc cgtattcggc gtgcattgcc atttgagtgt
     3481 gcagacagtg cgcccgcaat ccacgttccg tatcgtaaag cgcaacacct gtttcgtcgc
     3541 aagaagactc gattcctaat accaacatgg tctgatgccg ttaaaaactg aaaaacgtat
     3601 tctagcggat ttcggcacga ctgccgtatc ccaaaaacgg aacatgccgt ctgaagaccg
     3661 ttcagacggc atcgtcgcac cgtatcaaag cgttccgtaa gaatgcagcc cgctcaaaaa
     3721 catattcacg ccgataaagg caaatgcggt tacgaacaaa ccgataatcg cccaccacgc
     3781 cagcactttg ccgcgccaac cggcaaccag ccgcaagtgc agccaaacgg cgtaattgag
     3841 ccagacgatg aacgcccacg tctctttcgg atcccaactc caatagcgtc cccaagcatc
     3901 tgccgcccac agcgcaccca aaatggtggc aatggtaaag aacagaaagc cgacggcaat
     3961 cgccttatac atgacttcct caatcaacac ggattgcggc agccacgatt tcccgccttt
     4021 tccttccgca cgcagggaaa ccagttcggc aataccgagc atcgcggaaa tgcaaaacgc
     4081 gccgtaaccg ataaagtttg ccggaacgtg gattttcatc caccaggact ggagcgcggg
     4141 aatcagcggc tggatggtat gcgcctcgcg ggacacgctg taccacaaga caaatccaac
     4201 cacgaccgcc ataaagccga acacgaagcc gcccaatttc tgtatggcga acttaccttc
     4261 ataataaaga tacatcagcg cggtaatcac caaaaacagg atgaacactt catacaggtt
     4321 ggaaaccgga atatgccccg catcgggacg gagcagatag ctttcgtgcc aacgtaccag
     4381 cagaccggta aagcctgcta cggcagacac ccatgcaaac acggttccca tacccaacag
     4441 cgtgttggtc ggcacatttt ttacgcttgc caaaaccgcg cccgaaatat aggcgaacag
     4501 ggcgaaaaag acaaaggcgc actgccacat aatcgccgac tggctgctga ggaaataccg
     4561 caacaggaaa atctctgccg atttgatgtt gccgccatac agaccgacgg cggcataggc
     4621 aagcaatacg cttaaaggaa caaaccagcg catcggtttg aaaaaccaac ccaaaaacac
     4681 ggcaataccg gcactcgccc acaacatgac cgtttcgtaa atgtccatat gcataccgga
     4741 acgggtctgt acgaaaaccg tagccgcaaa aaccagcacg gcaaataccc aatcccaaag
     4801 attcagattg ctgatcaaag acttctgaat cagcagctcg tgttccggaa gggttttata
     4861 gtgttcagtc atgattcaag tccttgccga gccgttgcag actctcgacg tgttttggaa
     4921 attccttctg caaatcccgt tcgctgcggg ccgaagacat ggcaaaacgg attttgccgt
     4981 ctgaaaacaa tacccacgcc cgtttttcgc gcacataaaa catcaatacc gtacccaata
     5041 ccaacagcac cgagccgaga tagaccaaaa gcgcacccgg ggaacgggtc atctgcaaac
     5101 ccgacgaacg cacctcggaa aacccatcaa gttgcagcag cataggcgcg ggatattcgg
     5161 tcaaacccgt gtacgcatcc atactgtgca gcaggaaacg attccgcgct tcatcctgct
     5221 gccattcggg caagccgtac cggcgtatgg tttcatccaa agcagcgttc atcacgccgt
     5281 aaagcatttc gtagaaatag ccctgcatct tatcctgctg ctctttcggg atattggacg
     5341 taataaattc gtccaatccc aaatagcctt tttgtgcaaa gatgttcagc gtgttttccg
     5401 cagccagcat gaattgttcg cggatttcgg caggtgcgcc tttggttgcg tcggcaacca
     5461 gacgtttgcg cccttcccca tctttcaaaa actcacgcaa tgccataaag gtgtccgctt
     5521 tcaactgctt gtccaagggg atacgcagcc agcggtattg ctgctgcaag ccgctgcgcg
     5581 tgccggtaat ccaaaaataa tcctgttcct gcaaaaccgg cagcatatag tttttatatt
     5641 cgaccgcctg ccctgccgca tcacggatac ggtaaacaat ggaagggccg atattggtgt
     5701 attttttacc ttcctgagta acggcgcgga catcgttcag cgtggatttc aggctttttt
     5761 cccgttccgc gccctcgctc atgtcctcca cattcataga agtaaactga tcgaactcaa
     5821 gacgatattt gtgtttgcca atttccaacg gaaactggtg tatggatgtt gccttcaaca
     5881 cgacaggctc gcgcgaagca tcacccaaat tccacgcctt gaatgtcaaa tccgaaccgc
     5941 cgtcggcaaa actcgcctga taaatcgtga tgccgtgcaa ggtcaaagga tggttcacgc
     6001 ggatggtgcg ctcgagtttc tcaccggttg ccttatccgt tacttcaata tcactggcaa
     6061 aatcgcgcgg catacccgta ttgtaaaaat cgatatggaa ttttttcagt ttgacttcaa
     6121 aaggcaagtc ctgaaccaat atcccgttgt cggcattcag gaaaaccaca tccgcactct
     6181 gcccctcgga aatattgacg ttgcccctaa atgagagatt ggacgcaccc aaaatacttt
     6241 cgggcttgaa atccttggca taaaccgcct gattgtccgg aacaatccga ccggtcagca
     6301 tacccagttt caacagcagg ttactgtcta tcaacccgcc caggcaaatg acaatcaaag
     6361 caacatgggc aaagatatag ccccatttgt tcattgtgcc ttttttggcg gcaatcagaa
     6421 ccgacccgtc ttcacggtta atggtttttc cctgaaaacc ttgtacttcc agataacgtt
     6481 tggcaacctc gggcgcaatt tttacatcca acagcgaaga atggcgcatc gccgccagag
     6541 atttttcttt aaccttttcc cgaaaagact tcatttcgcg ccagaacggc ggcacattgc
     6601 gaatcaggca caaactggta gaaaccacca aaaacatcat gataacgaca aaccatgccg
     6661 aagcatagac gtcatacagt cccagaaaac caaaaatctg cgcccaaaac gatccgaatt
     6721 tgaccaaata atccgtctgc ggctggtttt gctgcaacac cgtaccgata accgatgcaa
     6781 tacccagcag actgagcaaa gcgactgcaa agcgcatgga gctgaaaaaa gcgaaccacg
     6841 gacgggaaag aagtggggga gatctacggg atttactcat tgtgtgttta ttccgccatc
     6901 aggaatatgg gaaagcagaa ttgggcaaac agaaaacaac gtcccgattc tactgtcttg
     6961 atgcttttta tttcaagaca atgaagacag cctgcatcga ttccaacggt tgcgattgaa
     7021 aaaacttatc gcagaattgc ctgaagccgt ctgaaaactt ttcagacggc ctctaaaaca
     7081 gactattgcg gaattaacgc aaaccttgga taaagttggc gaccgctttc aaatcttctt
     7141 cagacatacg gtttgcaata tcttccatga tggtattttt acgctgaccg gacttgtagg
     7201 cattcatctg ttcaacaata tatgcctgat gctgaccgcc caaacgcgga taagcctgaa
     7261 tttcgcttcc gcctcccggc atacccgcac cgctcggacc gtggcaggac atacacgccg
     7321 gcactttttt atcgctcaaa ccgccgcgat agattttcgc acccaattcg ggattttcct
     7381 taggattggc ttcaccggat ttgggctgct gtttggcata gaatgcggat acgttcaaaa
     7441 tatcctgatc gctcaaattc attaccaccg gtttcatcac agctgccgaa ccgtgggtgc
     7501 gtttaccgtc gcggatgccg atagtttgat gatagatgta agcagtatgc tgtgccgcca
     7561 aacgcggata catcgcaatg ccgctgttac cgtctgctgc atggcaagcc gcacaaaccg
     7621 ttgcggcaac ctgtttgcct ttttccacgt ctgctttggg agaggcggaa accgcaccgg
     7681 cagccaaaac aaaggccaat aaagtcaatc gtttcatgga gtgctcctga ttacagcatt
     7741 ggataacgca acaatgctct ttttatattc aaatacggga tttttgaccc gattaaaacc
     7801 gatgattctg taaacgtgtt attctatact aaatttacat taaattacca ctgtgtttca
     7861 cataaaacca accgcatatt tttgctgtcg gacaaacggc ggcggaaaac aaggatatgc
     7921 ccatgaacct ttttcaaaac gccaaattct tcacgacggt caaccacctt aaagacctgc
     7981 ccgacacccc tctcgaaatt gcctttgtcg gcaggagcaa tgccggaaaa tccagtgcca
     8041 tcaataccct gaccaaccat gtccgtcttg cctacgtttc aaaaacaccc ggacggacgc
     8101 agcatatcaa cttcttcgag ctgcagaacg gcaattttat ggtcgatttg cccggctacg
     8161 gttatgccca agtccctgaa gcagtacgcg cacattgggt caatctgctc ggcgactatc
     8221 tgcaacagcg caaacagctt atcgggctgg ttttgattat ggatgcccgc catcctttaa
     8281 aagaactcga catccgtatg ctggattttt tccacacgac cggcagaccg gttcacatcc
     8341 tgctgtcaaa agccgacaaa ttatccaaaa acgaacagat aaaaaccctg tcccaagtca
     8401 aaaaactgct caaaccttat tccgacaggc aaaacatcag cgtacagctg ttttccagcc
     8461 tgaaaaaaca aggtattgac gaggccaacc gaactgtcgg aagctggttt gacgcagcag
     8521 atgccgccgc ttcctctcca gaggaaaact gaccccaatt atacggaaac cgtatttccc
     8581 ccacttgacc gaccgcaaac atttaaaaaa ttgccactgc caaatctaaa atgccgtctg
     8641 aaagactttt cagacggcat tttgcggagt ctttaaaaca gagaatccaa ctgctgctgt
     8701 ttggaaccag tattactcgg aagcaccggc gtttcctgca tatcttggcg gacttcgtca
     8761 tccgccgcct gccgtccgcc ttctgccgcg cccccgtcat cttcttttgc ccgtcgggaa
     8821 ggttgcggcg caataccgct gttgtccagc gtcaagcccg gatcggttac catacgttcc
     8881 ttcatatagt attcgccatt gctgctgacc acaccttcag gcattttcat ccccttgccc
     8941 tgctttcctt tcaacgcaaa acgcatatag tccacccaaa ccggcaccgc aatcgtaccg
     9001 ccgtagccga cacgccccat actcttaggt ttgtcgaagc cgatatatac ggcagtaacc
     9061 acatcagggt taaaaccgac aaaccacgca tccttattgt cattggtcgt acccgtttta
     9121 ccggcaatat ccgttcttcc caacgcagct gccccccttg ccgtaccgac acggaccaca
     9181 tcctgcataa tcttatacat aatataggca ttgcgcggat tgattgcctg aggcgcattt
     9241 tgcccggcca ccaaaggttg catttgggcg cgcaacctgc cgtctctgtc ataaatctta
     9301 tcgattacgt gcgaagaaac cctatatccg ccgttcgcaa atacgctata tgcctccgcc
     9361 actttcaacg gcgttgtctc gcccgtacct aaagccatag acaggcttgc cggcagctcg
     9421 gacgacctga agccgaaacg ccggatatac tgttgcgcgt aaccgacacc gatagacatc
     9481 aaaatacgga tggaaaccat attcttggaa gccgtcagag cctgtctcaa agtaatgtag
     9541 ccggaatatc tgccgtctga atttttaggt gtccaaaccg aaccgttcgg ccctttcccc
     9601 ggcagggaaa tcggcgcatc gttaaccact gtggacgcgg tcatcccctt agataatgcc
     9661 gccgaataga caaacggctt aaaggtcgaa cccggctgcc gcattgcctg aacggcacga
     9721 ttgaatgttt tgctgtgaaa atcataaccg ccgaccagcg cgcgcacagc tccggttttt
     9781 gcatccagcg aaaccaaagc cccctgcagc aacggctctt gaaccaccgc ccaacgcccg
     9841 ccgttgtttt tgacacggat gaccgcgccc ctgcggatac ggtcctcccc cattttttca
     9901 ttattgaccg cgcgggccgc aaagcccaag gcgcgcctat caagcgtaac ccgcctgccg
     9961 ccgggcagct gtatgacgac atttttcttt ttagtcacat ccaacacaac ggcgggaacc
    10021 attttatcga cggtatagag tcccgacaga tactggctga cagtctcctc gacatcttca
    10081 ctcttactca aatcgatata gttttccgca ccgcggtagc tgctgccgcg atcgaaattc
    10141 cgtagagcct tgcgcaatgc ctcggttgcc accttctgat gatcggcgcg gaccgtggta
    10201 taaaccttaa aaccctgcgt ataggcatct tcaccgtatt tctcatacag ttcctgacgc
    10261 accatttccg ccacatataa agcactctga tcgattttcc gaacaaaccg ctcgtaatgc
    10321 agttcctcat tcaacgcctg atcgcgctgt tgcacggtaa tcatcttctc ctcgagcata
    10381 ttgttcaaaa tatacttctg gcgcaacttg gcacgttctg gattaacaat cggattatag
    10441 gcagacggag ccttgggcag tcccgcaagc atggcggctt ccgccaaagt caaatctcgg
    10501 acattcttat tgaaatagat ttgcgcggca gatgcaaaac cataggcgcg ctgaccgagg
    10561 taaatctgat tgaaatacaa ctcgaggatt ttgtctttgc ttaaagactg ctcgatttta
    10621 taggcaagca acacctcatt gaatttgcgt gtgaacgttt tttcactgct caaataaaaa
    10681 tttttcgcca cctgctgcgt aatcgtactc gcacccgact gcacgctgcc ggacacgaca
    10741 ttgccgacgg cagcgcgggc aacaccccaa acatccaccc cccaatgccg gtaaaagcgt
    10801 ttatcctcgg cggcgataac cgcattccgc aacacctctg ggaaatcgcc gatttttgta
    10861 aattcgcgcc gctgctcccc atacataccg atgacttccc catccgccga ataaatagtc
    10921 aacggcattt taggctggta atgctgcaaa gaatccaaag acggcagttt cggatacgtt
    10981 accaaaatag caatggcaac caaacccact ccaaatacac aaaacccaaa aaccaaacca
    11041 aaacaagtcg ttaaaatctt tttaatcata gctgaataat aatttaccat tattggtatt
    11101 aaataaagta aaatagcaac cgatttctac aaagcacggt ttcaatgtgc aaagaacaag
    11161 gaatccatta cggataccga aacggttact cactgtacaa ataaagcagg aactttcatc
    11221 atgcgcttgt ttaaaagctt gaaaaaccct aaaaaaacag atgccaagct ccctaaaaaa
    11281 tcttcgggac tcaataaccg cgcggcaatc ggcatcgata tcgaccagca ttccatcaaa
    11341 atggtccaat tgtcaggacg tagtttaaac caaattcaat tggaaaaata cgtcattgcc
    11401 aaattaccaa agaatatcat tcaaggcaat aaagtccaaa attacgatca acttgttaca
    11461 tatttgcaac aagcctatgc caaactgggt acttcgtgca aaaacatcat cgcgtccgtc
    11521 ccgcaaaatc tggcaaccat cgaacaattg acctacacag acaaagatgc agaattagac
    11581 ctgcaggggt tcgtggagtc ctccatctcc gaagtcagct cgatatcgct cgaagaagcc
    11641 aattacgact atcaggtctt gtcccaatcg gccgccggcg aagctgtgtt ggccgtcgca
    11701 tcgagaaagg atgaaatcga acccctgatt gacgcattca acgccgccgg tatgaaatta
    11761 tccgcgcttg atgtggacat tttcggacaa tacaacgcct acgcgctatg gataaaccat
    11821 ttcgcccccg agcttgcagc cgaaaaagtc gccattttcg gcgtatatgc cgcacagacc
    11881 tacgccttgg tcatccaaga cggaaaaatc ctatacaaac aggaaacctc cgtcagcgaa
    11941 gaacagctca accaactcat ccagcgcacc tatcaggtaa cagaagaaaa agcggaagaa
    12001 atcatcaact ccccgcaaaa accttccgat taccaagaaa gcgtggcaaa ctatttcaac
    12061 cagcagatta cccaagaaat acaaagggtc ttgcagtttt attacaccac gcagaccgca
    12121 gacgatatga ccgacatcaa gcatatcctg ctgaccgggg aagcggcgcg ccaggaaggt
    12181 atcgcccaaa ccgtcgcctc acaaaccaat gcagatgtac aatgcgtcca tcccgcgcgt
    12241 tattttgcgg acaacctcaa aacagacaaa caacaattcg aacttgatgc gccgacactg
    12301 accagggcgt tcggtttggc ggtacgggga ttataattat gaacaattta atcaaaatca
    12361 acctcctccc ctacagggaa gagatgaaca agcgcaaaca gcagcagttt aaaacgctga
    12421 tgtacggtgc cgtgctgacg ggcgttgccg ccgttgcggc aacctacctg tttatcgaca
    12481 atatgatcaa taaccagtcg gaaagaaaca cgctgctgga aacctccatc gcacacttgg
    12541 ataccgagct gtcggaaata caaaagctca aacaggaaaa agatgccttc ctgattaaga
    12601 aaaacaaaat cgaggagctc cagctcaaac gcctccaagc cgcaaaaatc ctcgacagcc
    12661 tgaatgaggc cgtccccgga agcacctacc tgacctcgct ggatgccgtt accgccgact
    12721 cttatcggct cagcggcagg acatccagcg acaaccgcgt tgccgccatg atgagggcga
    12781 tgcccaatac cggcatattc aagcaacccg aattgttaag catcaagaaa aacaattcgc
    12841 atcaagaatt tacccttcag gcaacattac aacccatcgt aaaggcggcc gaatccaaag
    12901 agaatccggc ttcgggaaac gcacaggagg caaactgaat ggcttctaaa tcatctaaaa
    12961 ccaacttgga tctcaacaac cttcacctgc tcaaccttcc tgccaggctt tttatcgccc
    13021 tgctggccgt tgccgccgtg ctggggctcg gttatgccgg attgttcaaa agccagatgg
    13081 aatcccttga ggaatacgaa gcaaaagaaa ccgaactgaa aaacacctac aaacagaaaa
    13141 gtatcgacgc ggccagcctg aacaacctga gggacgaact tgcctcaatc cgctctgcct
    13201 tcgatatcat gttgaaacag ctgccgacag atgcagaaat tcccaatctg gttcaagagc
    13261 ttcatcaggc aggttcgagc aacggcctgc gcttggacag cgttatgccc caacctcccg
    13321 tagatgacgg ccccatcaaa agattaccct attccatttc cattaccgga aattacgaac
    13381 agatcagcca atttacccgc gatgtcggca gcctctcccg aatcattacc cttgagtcgc
    13441 tgaaaatcgc ccaatctccg gaaaacggcg gcaatcctga cggcaagagc agcatcctga
    13501 acctcagcgc cattgccacc acctaccaag caaaatccgt agaagagctt gccgcagaag
    13561 cggcacaaaa tgccgagcaa aaataactta cgttagggaa accatgaaac actatgcctt
    13621 actcatcagc tttctggctc tctccgcgtg ttcccaaggt tctgaggacc taaacgaatg
    13681 gatggcacaa acgcgacgcg aagccaaagc agaaatcata cctttccaag cacctaccct
    13741 gccggttgcg ccggtataca gcccgccgca gcttacaggg ccgaacgcat tcgacttccg
    13801 ccgcatggaa accgacaaaa aaggggaaaa tgcccccgac accaagcgta ttaaagaaac
    13861 gctggaaaaa ttcagtttgg aaaatatgcg ttatgtcggc attttgaagt ccggacagaa
    13921 agtctccggc ttcatcgagg ctgaaggtta tgtctacact gtcggtgtcg gcaactattt
    13981 gggacaaaac tacggtagaa tcgaaagcat taccgacgac agcatcgtcc tgaacgagct
    14041 gatagaagac agcacgggca actgggtttc ccgtaaagca gaactgctgt tgaattcttc
    14101 cgacaaaaac accgaacaag cggcagcacc tgccgcagaa caaaattaaa aagaggatta
    14161 ctccattatg aataccaaac tgacaaaaat catttccggt ctctttgtcg caaccgccgc
    14221 ctttcagaca gcatcggcag gaaacattac agacatcaaa gtttcctccc tgcccaacaa
    14281 acagaaaatc gtcaaagtca gctttgacaa agagattgtc aacccgaccg gcttcgtaac
    14341 ctcctcaccg gcccgcatcg ccttggactt tgaacaaacc ggcatttcca tggatcaaca
    14401 ggtactcgaa tatgccgatc ctctgttgag caaaatcagt gccgcacaaa acagcagccg
    14461 tgcgcgtctg gttctgaatc tgaacaaacc gggccaatac aataccgaag tacgcgggaa
    14521 caaagtttgg atattcatta acgaatcgga cgataccgtg tccgcccccg cacgccccgc
    14581 cgtaaaagcc gcgcctgccg caccggcaaa acaacaggct gccgcaccgt ctaccaagtc
    14641 cgcagtatcc gtatccgaac cctttacccc ggcaaaacaa caggctgccg caccgtttac
    14701 cgagtccgta gtatccgtat ccgcaccgtt cagcccggca aaacaacagg cggcggcacc
    14761 agcaaaacaa caggcggcgg caccggcaaa acaaaccaat atcgatttcc gcaaagacgg
    14821 caaaaatgcc ggcattatcg aattggcggc attgggcttt gccgggcagc ccgacatcag
    14881 ccaacagcac gaccacatca tcgttacgct gaaaaaccat accctgccga ccacgctcca
    14941 acgcagtttg gatgtggcag actttaaaac accggttcaa aaggttacgc tgaaacgcct
    15001 caataacgac acccagctga ttatcacaac agctggcaac tgggaactcg tcaacaaatc
    15061 cgccgcgccc ggatacttta ccttccaagt cctgccgaaa aaacaaaacc tcgagtcagg
    15121 cggcgtgaac aatgcgccca aaaccttcac aggccggaaa atctctcttg acttccaaga
    15181 tgtcgaaatc cgcaccatcc tgcagatttt ggcaaaagaa tccgggatga acattgttgc
    15241 cagcgactcc gtcaacggca aaatgaccct ctccctcaaa gacgtacctt gggatcaggc
    15301 tttggatttg gttatgcagg cacgcaacct cgatatgcgc cagcaaggga acatcgtcaa
    15361 catcgcgccc cgcgacgagc tgcttgccaa agacaaagcc ttcttacagg cggaaaaaga
    15421 cattgccgat ttgggcgcgc tgtattcaca aaacttccaa ttgaaataca aaaatgtgga
    15481 agaattccgc agcatcctgc gtttggacaa tgccgacacg accggaaacc gcaatacgct
    15541 tgtcagcggc aggggcagcg tgctgatcga tcccgccacc aataccctga ttgttaccga
    15601 tacccgcagc gtcatcgaaa aattccgcaa actgattgac gaattggacg tacccgcgca
    15661 acaagtgatg attgaggcgc gtatcgtcga agcggcagac ggcttctcgc gcgatttggg
    15721 cgttaaattc ggcgcgacag gcaagaaaaa gctgaaaaat gatacaagcg cattcgactg
    15781 gggggtaaac tccggcttcg gcggcgacga taaatggggg gccgaaacca aaatcaacct
    15841 gccgattacc gctgccgcaa acagcatttc gctggtgcgc gcgatttcct ccggtgcctt
    15901 gaatttggaa ttgtccgcat ccgaatcgct ttcaaaaacc aaaacgcttg ccaatccgcg
    15961 cgtgctgacc caaaaccgca aagaggccaa aatcgaatct ggttacgaaa ttcctttcac
    16021 cgtaacctca atcgcgaacg gcggcagcag cacgaacacg gaactcaaaa aagccgtctt
    16081 ggggctgacc gttacgccga acatcacgcc cgacggccaa atcattatga ccgtcaaaat
    16141 caacaaggac tcgcctgcgc aatgtgcctc cggtaatcag acgattctgt gtatttcgac
    16201 caaaaacctg aatacgcagg ctatggttga aaacggcggc acattgattg tcggcggtat
    16261 ttatgaagaa gacaacggta atacgctgac caaagtcccc ctgttgggcg acatccccgt
    16321 tatcggcaac ctctttaaaa cacgcgggaa aaaaaccgac cgccgcgaac tgctgatttt
    16381 cattaccccg aggattatgg gtacggccgg caacagcctg cgctattgat gcgtcaaaat
    16441 aagggcatat gttttacggc atatgccctt tctttatgct ttttgccgcg accgaaatgc
    16501 cgtcattccc gcgcaggcgg gaatccagtc cgttcagttt cggtcatttc tgataaattc
    16561 ctgttgcttt tcatttctgg attcccactt ttgtgggaat gacggcggaa ggggtaaatc
    16621 ctcgcaatcc aaagcctcgt catttccaca aaaaacagca acccgaaaca gcaacttaaa
    16681 acctcgtcat tcccgcaaaa gcgggaatcc ggtccgttca gtttcggtcg tttccgataa
    16741 attcctgctg cttttcattt ctagattccc acttttgtgg gaatgacggc ggaagggata
    16801 aatcctcgca atccaaagcc tcgtcatttc tacaaaaaac agcaacccga aacagcaact
    16861 taaaaccccg tcattcccgc gcaggcggga atctaggtct gtcggttcag gaacttatcg
    16921 gataaaacgg tttctccaac cctgcgttct agattcccac tttcgtggga atgacgggat
    16981 atgggtttcc gtgcggacgt gttcggattt ccgcctgcgc gggaatgacg gcgacagatg
    17041 cccaacggtc tttatagtgg attaacaaaa atcaggacaa ggcgacaaag ccgcagacag
    17101 tacaaatagt acggaaccga ttcacttggt gcttcagcac cttagagaat cgttctcttt
    17161 gagccaaggc gaggcaacgc tgtactggtt tttgttaatc cactatagta ttgataaaca
    17221 tattatcttc aatatattca attggataat tgtttaccta agcaaagata attgcctttt
    17281 cctgacaaat aagtgaaatc aacggattgt caaaacacag cctgaaataa aaaacctccc
    17341 tgatttcttt tatttgtcct taaaatcaga aaggttcggg atggtcgggt tatttttcca
    17401 aacgtaccgc cgccctgccg atttcgtata aaattccgcc gtaacccgac aagcccgaac
    17461 cctgtcgccc cgaaaggcgg ggtgtcaaac attaaggaat tgtgatgaaa aactttaacg
    17521 gcaaactcat cctcatcgga ctgatgggcg cgggcaaaac cacgctgggc cggcaaatgg
    17581 cgcagcggct ggattaccgt ttttacgaca gcgatcacga aatcgccgca gccgccggcg
    17641 ttcccatccc caccatattt gaaatggaag gcgaacaggg attccgttcg cgcgaaaccg
    17701 ccatactcaa aaagctggtt atcctgcccc atatcgtcct gtccaccggc ggcggcgcgg
    17761 tgttaaaaga agaaaaccgc gcccttatcc gcaaaagcgg cacggtcgtc tatctgcacg
    17821 ccccgcccga aaccctgctc gaacgcacgc gctgcgacaa cagccgtcct ttgctgcaag
    17881 ttgccgatcc tttggcgaaa ttacgtgaac tctacgccgc acgcgacccc gtttaccgcc
    17941 aaaccgccga ctttaccgta gaatcggcaa actgccggga aaccgtgcaa accctgctca
    18001 aacgcttatc ccgataaacc ggcatatgcg ccgcgcccag aaaaccaaac cgcgccccgc
    18061 ccggcgggcc ggcggttcaa actttaagga acaacaatga aaacactgac cgtacacacc
    18121 ccgtcccaca gctaccccat ctttatcggc aacggactgc tgccgcaggc aggaagcctg
    18181 ctcaaaccgc atttgggcaa acgcgccgcc atcatcacca acgaaaccgt cgccccgctc
    18241 tacctcggca cgcttcagac ggcattggat gcggcaggcg tatcccattt cagcatcatc
    18301 ctgcccgacg gcgaggcgca caaaaactgg cagacgctca acctcatctt tgacgggctg
    18361 atgcaaaacc gcgccgaacg caaaaccacg ctcatcgcac tgggcggcgg cgtgatcggc
    18421 gatatgacgg gttttgcggc ggctacttat caacgcggcg cgccatttgt tcaaattccc
    18481 actactttat taagtcaggt cgattcctcc gtcggcggca aaaccgccat caaccacccg
    18541 ctcggcaaaa atatgatcgg cgcgttctac cagccgcagg cggtgcttgc cgacttggac
    18601 acgctgcaca ccctgcccgc ccgcgaactg tccgccggta tggcggaagt catcaaatac
    18661 ggcacgctcg gcgacattag tttttttgaa tggctggaac agcatatgcc cgaactgatg
    18721 gcactcgaac gcgcgcccct catccaagcc gtgtaccgct gttgccaaat gaaggcagac
    18781 atcgtcgccc aagacgaaac cgaacagggc atacgcgcat ggctcaacct cggacacacc
    18841 ttcggacacg ccattgaaac cgagatgggt tacggtactt ggctgcacgg cgaggccgtc
    18901 gccgccggct gcgtgttggc ggcgcgtttg tccgaacaac tgggcaaaat ctccgccgca
    18961 gataccgcgc ggctcgccgc cctgctcgaa gccgccggac tgccgtccgc gccacccgtg
    19021 tttgcctttg aaaaatggct ggaacacatg agccacgata aaaaagtcag cggcggcatc
    19081 atgcgcttta tcggtctgaa ccggctgggc gaagccaaca tcaccgaaat taccgacacg
    19141 gacatcctcc gccgcaccct gcaaccgtat ctctgatttc ctctgccgat gtgctgccgc
    19201 gcgggtttga cgcacgatga tgattttcca tcatctttct ccgtaaaagc gggaatccag
    19261 tccgttcggt ttcggtcgtt tccgataagt tcccgttgct tttcatttct agattcccac
    19321 tttcgcagga atgacggtgg aaaggttttt gttgtttcgg agaagtttct gcaaccctag
    19381 aatctcgtta tttccacaaa aaacagaaac ccgaaacagc aacttaaaac ctcgtcattc
    19441 ccgcaaaagc gggaatccag tccgttcggt ttcggtcgtt tccgataaat tcccgttgct
    19501 tttcatttct agattcccac tttcgtggga atgacggcgg agaggttttt gttgtttcgg
    19561 agaagtttct gcaaccctag aatctcgtta tttccacaaa aaacagaaaa ccaaaacagc
    19621 aacttaaaac ctcgtcattc ccgtaaaagc gggaatccgg tccgttcggt ttcggtc
//
LOCUS       DAWGBY010000025        19566 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.025, whole genome shotgun sequence.
ACCESSION   DAWGBY010000025 DAWGBY010000000
VERSION     DAWGBY010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19566
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.025"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..189
                     /locus_tag="WHG62_000790"
     CDS             <1..189
                     /locus_tag="WHG62_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ1724927.1"
                     /translation="FADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRF
                     NFGTPSQQLKILRDWCGI"
     gene            complement(261..863)
                     /locus_tag="WHG62_000791"
     CDS             complement(261..863)
                     /locus_tag="WHG62_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ1724928.1"
                     /translation="MTDVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            complement(897..2168)
                     /gene="purD"
                     /locus_tag="WHG62_000792"
     CDS             complement(897..2168)
                     /gene="purD"
                     /locus_tag="WHG62_000792"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ1724929.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDIISGLDAANQIGKVFHAGTTAKEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            2326..2643
                     /locus_tag="WHG62_000793"
     CDS             2326..2643
                     /locus_tag="WHG62_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ1724930.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKYVVTLIRDMDNFYT
                     HEYQACHQAIEDGVELDLSTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            complement(2695..3306)
                     /locus_tag="WHG62_000794"
     CDS             complement(2695..3306)
                     /locus_tag="WHG62_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ1724931.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGVQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILERDLQLDCRLTVSLSLVNYEACVAAWKNTRQIEVNTEKPFE"
     gene            complement(3369..4304)
                     /locus_tag="WHG62_000795"
     CDS             complement(3369..4304)
                     /locus_tag="WHG62_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ1724932.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEVLKN"
     gene            complement(4315..5064)
                     /locus_tag="WHG62_000796"
     CDS             complement(4315..5064)
                     /locus_tag="WHG62_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ1724933.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIECGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            complement(5290..6258)
                     /gene="waaC"
                     /locus_tag="WHG62_000797"
     CDS             complement(5290..6258)
                     /gene="waaC"
                     /locus_tag="WHG62_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ1724934.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPGVELHWLCEAGFTDI
                     ARLHPFVKKIHVMKWRQWRKHLFQAETWREMGHLKQTLRQEAFNFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGLAALAYAKTYAVPKGKNAVWRNRELFAQVFGYAMPETQV
                     FGLTVPEAGCLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQTLMDCVAADKG"
     gene            complement(6296..6931)
                     /locus_tag="WHG62_000798"
     CDS             complement(6296..6931)
                     /locus_tag="WHG62_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ1724935.1"
                     /translation="MIVSIDVDAQKTFTPLCPKELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHAAAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIVGGLATDYCVKTTVLQL
                     LKGGNWQVIVNEAACRGIAPDTIETAWQEMRSAGAVILKNAEEIKKYINNQ"
     gene            7046..7726
                     /gene="tsaA"
                     /locus_tag="WHG62_000799"
     CDS             7046..7726
                     /gene="tsaA"
                     /locus_tag="WHG62_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ1724936.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLASAAEVCIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIIDIKPYIPFVESKPDASSGFVSGKPEELEVV
                     WLENIGAENLSESTQNLISQSIAQDPRPAYQDIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            7795..7914
                     /locus_tag="WHG62_000800"
                     /pseudo
     CDS             7795..7914
                     /locus_tag="WHG62_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7984..8988)
                     /gene="gap"
                     /locus_tag="WHG62_000801"
     CDS             complement(7984..8988)
                     /gene="gap"
                     /locus_tag="WHG62_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ1724937.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPSGNDVKTVVYGVNQNILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            9432..12026
                     /gene="mutS"
                     /locus_tag="WHG62_000802"
     CDS             9432..12026
                     /gene="mutS"
                     /locus_tag="WHG62_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ1724938.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKSIADIERIAARIAVGNARPRDLAALRDSLFALSEIELSAECSSLLGTLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPETHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNELEDQAAANRP
                     QLDIFSTMPSEKGDEPNVDSFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            complement(12150..12641)
                     /locus_tag="WHG62_000803"
     CDS             complement(12150..12641)
                     /locus_tag="WHG62_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ1724939.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIR
                     AYYGRCLKDDELPLAFAAVDDFGTLLGSAAVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(12645..13040)
                     /locus_tag="WHG62_000804"
     CDS             complement(12645..13040)
                     /locus_tag="WHG62_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724940.1"
                     /translation="MPSDVGIRLQTAFKRKLNMKKILYFLIFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQAAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNAVYGAGGTKASGN"
     gene            complement(13061..14455)
                     /locus_tag="WHG62_000805"
     CDS             complement(13061..14455)
                     /locus_tag="WHG62_000805"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ1724941.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNAGNVVYQTRRFDRYKEVIAELLEKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGATLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNGKLAELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNTLADECLYFYVKQTPTEADVQKHWDDEAAAR
                     MLRFAERLEGLEDWNTEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            complement(14571..15227)
                     /locus_tag="WHG62_000806"
     CDS             complement(14571..15227)
                     /locus_tag="WHG62_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ1724942.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            complement(15224..15577)
                     /gene="arsC"
                     /locus_tag="WHG62_000807"
     CDS             complement(15224..15577)
                     /gene="arsC"
                     /locus_tag="WHG62_000807"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ1724943.1"
                     /translation="MPEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPDLDNDALLRAIAEHPALLERPIVLANG
                     KAAVGRPLENIEAIL"
     gene            15701..16183
                     /locus_tag="WHG62_000808"
     CDS             15701..16183
                     /locus_tag="WHG62_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ1724944.1"
                     /translation="MKYLNLAAIALAATFAAHTASADELAGWKDGTAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            16377..17027
                     /gene="ftsE"
                     /locus_tag="WHG62_000809"
     CDS             16377..17027
                     /gene="ftsE"
                     /locus_tag="WHG62_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ1724945.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            17024..17941
                     /gene="ftsX"
                     /locus_tag="WHG62_000810"
     CDS             17024..17941
                     /gene="ftsX"
                     /locus_tag="WHG62_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ1724946.1"
                     /translation="MSIIHYASLHIESARTALKELLRQPFGTLLTLLMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLARDKRIANVRFIGKEDG
                     LAELQSNLDQNLVSMLDGNPLPDAFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSTVRPLVDAIFKPYGLNIGWRFFYPEEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            18032..18280
                     /locus_tag="WHG62_000811"
     CDS             18032..18280
                     /locus_tag="WHG62_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ1724947.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(18347..19525)
                     /locus_tag="WHG62_000812"
     CDS             complement(18347..19525)
                     /locus_tag="WHG62_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ1724948.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFTADAEAV
                     VKDIADVAEDDMILDIGPKSAAELADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
BASE COUNT         4937 a         5479 c         4426 g         4724 t
ORIGIN      
        1 tttgcagacc gtcaaaacca cattaacggc attgagaact tttggaatca ggcaaaacgc
       61 gtcttgcgaa aatacaatgg aatcgatcgc aaatctttcc cgctgttctt gaaagaatgc
      121 gaatttcgat ttaacttcgg cacaccgtct caacagctta aaatcctgcg ggattggtgt
      181 gggatttagg gctaatctag tacagcccca aaattttttc tttgtgtatg caaaaaaagt
      241 tttcattcaa atacccatat ctaacgcaaa cgtttacctg tttccccgtc aataatctga
      301 ctcggcgatt tctgcctgcc gattctccca ccaacaatcc acacatcgcg tccgaattgc
      361 cttctgactt ccctctccgt ccgacacgcg cgtttgcctg cgcggttgca cgaagtcgag
      421 accaaaggcg tttgcaaagc ctgacacaag cggcgcgcac ctacatgggc gggaaccctg
      481 accgccaact tgctgcgctg tttcccgcgc aactcaggta agacacagga tttggcggat
      541 aataggaacg ttttaggggc gggccattct tttctaagca tatcctgcag attttcagac
      601 ggcatttgaa gtaaaggctg caattgctca aattgattcc caatgacaat catacccttg
      661 tgttgcggtc tttttttcaa atgcgccaac ttaccgagtg ctttggctaa tgtcggaaga
      721 caccccaagc cataacaaga ttcggtcgga taagcgacca aaccgccttt tttcaaataa
      781 acgcttaact tacgttgcgc tgatgctgcg ataattctcg gaaataacat aatataaaat
      841 accgtctgaa gcacatcagt catacttggc ttcagacggc atcatcctct ttctagttaa
      901 cggttaatcg ctttatcggc aatgtcttta cggtattgca tcccgtcgaa actgattttt
      961 tccaacgcgc catatgcctt agctttcgct tgcgccacat tgtcgcccaa tcccacaaca
     1021 cacaatacgc gtccgccgtt ggtcaatacg tcacctttct cttttgccgt tgtacctgca
     1081 tggaaaactt tgccgatttg gttggcagca tccagaccgg aaataatatc gccttttttg
     1141 ggcgtttcgg ggtaattttg cgccgccagt accacgccca cggcagtttg cgggctccat
     1201 tccgcggtta cgctatcgag tttgccgtct attgccgctt caaccaaatc cgataagtcg
     1261 ctgttcagtc ggctcataat cggctgggtt tcaggatcgc cgaaacggca gttaaactca
     1321 atcgtatagg gtgcaccgct ttgatcaatc atcaaacctg cgtacaggaa accggtgaac
     1381 tcatgcccct ccgctttcat ccctgctacg gtcggcaaaa taatttcatt catcgcgcgt
     1441 tcgtacacaa caggcgttac cacaggcgca gggctgtacg cacccatacc gcccgtattc
     1501 agacctttgt cgccgtctaa aagacgcttg tggtcttggc tggttgccat aggcagtaca
     1561 ttattgccat caaccatgac gataaaactc gcttcttcgc cttgcaggaa atcttcaatt
     1621 acaacacgcg cgccggcatt gcccattttg ttgtccagca gcatatcatc aatcgcagca
     1681 tgcgcttcat ccaaagtcat cgccacaatc acgcctttac ctgccgccaa accatcggct
     1741 ttgataacga taggcgcacc tttctgattg acgtaatcat gtgcggcatc ggcgttttca
     1801 aaggtttgat attgcgcggt cggaatattg tatttcgcca taaatgcttt ggcgaaatct
     1861 ttggaacttt ccaactgcgc cgcatattgt gtcggaccga atatttttag tcctgcagca
     1921 cggaaatcat ccacaatacc tgccgccaaa ggcgcttcag ggccgacgac ggtaaaaaca
     1981 atattttctt tacgacagaa ttcaatcaaa tcctgatgcg cagtcaagtc gatgttttgc
     2041 aacttgggtt caatcgctgt accggcatta ccaggcgcaa caaatactgt ttccacttta
     2101 ggcgactgcg ccaatttcca agccagcgcg tgttcgcgac cgccattacc gataaccagc
     2161 agtttcatac catctccttg acaaatatgt acttttaacg aaaactcgat acaaagggac
     2221 ttttatccca tctgaagaaa ttttagtaga atcaaacaaa agaccgcttc attccactct
     2281 gcaacctatt caacttatcc ataaattaaa aaaggacaag caaccatgca aaaacgtatt
     2341 gatgaaatcc aaagcaaata ccgcgaatgg tgtcatttac taccgcaact ggaagaagac
     2401 atccgccgtt ggaaatatgt cgtcacttta attcgcgaca tggacaattt ctatacccac
     2461 gagtatcagg cgtgtcatca ggctattgaa gacggggtag aactggattt gagtacggaa
     2521 ggcgaataca gcattatgag tgaagatgcg ctatggaacg cgctgggcga attccatcaa
     2581 ttggcttggt tatatttgcg ctccagcgtc gatgccttag acaaatatac acaagaagat
     2641 tagtcagcga agaggtcgtc tgaaatacca tcacaaagca tttcagacga cctttcattc
     2701 aaaaggcttt tccgtattta cttcaatctg ccgagtattc ttccaagccg caacacaggc
     2761 ctcataattt accaacgaca aactgaccgt caatcggcaa tccaactgca aatcccgctc
     2821 caatatatcc gcctgatatt gtttggcaat gcgtatcgct tcattcaaaa acggatattc
     2881 acatttcagc caaacagttt tttcaatatt cttttcaact acttctgcaa ctgccaacgc
     2941 ttgagccgtc gcctctttgt acgcatgtat cagacctgga acacctaaca aagtaccacc
     3001 gaaatagcgg acgaccacaa ccaaaacgtc ggtaataccc accgaatcaa tctgtcccaa
     3061 aattggtcgt ccagcacttc ctgatggctc tccatcatcg ttggcacgaa attgcacacc
     3121 atccacaccc aaacgatagg catagcacca gtgtcgtgct ttatgatgct cttcctttaa
     3181 cggatcgagg tattttttca catcagccaa tgtccgaatc ggataggcaa atgcaataaa
     3241 acggctgcct ttatctttaa actcagcctg cgtcgaggaa gtaatggttt tataagtcgt
     3301 aatcatgctg aaatgttttc agacgacctc attaataaca aggtcgtctg aaagtttcac
     3361 gtgaaacatc aatttttcaa tacttctgtt aattgtggaa cgatttcaaa taaatcgcca
     3421 accaatccgt aatcggctac attgaaaatc ggcgcatcag catctttatt gattgcaaca
     3481 attaccttac tgtcttgcat accggcaacg tgttgaattg cacctgaaat accgattgca
     3541 aaatagagtt gcggcgcaac cactttaccg gtttgtccga cttgagcatc gtttggcgca
     3601 tattcggcat caactgctgc acgggatgca ccgattgccg cacctaaaac atccgccaac
     3661 ggtgtcagca cttcattgaa tttttccgca ctacccaacg cacgaccacc ggaaacaatc
     3721 acttttgcct gagtcagttc aggacgatcg gaatgggaaa gctgacggtt aacaaaacga
     3781 ctcaggtttt gggcaggggt tgcttcaaca ttaattacct cagcattacc accttgcgcc
     3841 gccactgcgt caaaaaccgt cgcacggaag gtcagcacca atttttctga atcagcttgc
     3901 acggtttcaa atgcattacc cgcataaatg gggcgcacaa aagtcgtgtt atccacaatt
     3961 tcggtcaaat cagaaatttg cggtacgtct aataaggctg ctacgcgagg caaaaggttt
     4021 ttaccgaatg tagttgccgt tgctgcaaca tagcagtaat ccgctgccaa tttaacaacc
     4081 agcggagcca actcttcagc caaaccttcg gcataatggg cagcatctgc aaccaaaact
     4141 ttttccacac ccgccacttg ttttgcgaac tctaccacag cagatgcacc gcttccggca
     4201 accaataaat cgattttacc cagcttagcg gcagcggtaa cagcatgcaa agtggtagga
     4261 ttcaactgtt tgttgtcgtg ttcgacaata atcaatacac tcatttcaac ctcctcaaat
     4321 cactttggct tcgtttttca atttttcaac caattcggca acgcttgcta cttttacgcc
     4381 tgcctgacgc gccttaggtt cggcaaattt caccgttttc aaacgaggtg aaatgtcggc
     4441 aaccaaatcg tcaggagtca gtttttccaa aggttttttc tttgccgcca taatattggg
     4501 gagtttgaca aagcgcggct cgttcaaacg caaatcagca ctgataacag caggcagttt
     4561 taatgctatg gtttcttcgc cgccatcaat ttcgcgcaca atctgtactt caccacattc
     4621 aatgtgtact tttgaagcaa acgtaccttg cgccgcattc agcaaagctg ccagcatttg
     4681 cgccacttga ttggcatcat catcaatcgc ttgtttgccc aaaaagaaaa tttgcggatt
     4741 ttctttgtcc gcaacggctt tcagcaactt agcaacggcc agagactcca gtttagtatc
     4801 ggtttcaaca tgaatggcac ggtcggcacc catcgccaaa gctgtacgca aggtttcttc
     4861 gcattttttc tcacccaaag aaaccgctac gatttcgctt acttttccgg cttctttcaa
     4921 acggacagct tcttccacag cgatttcgtc aaacggattc atcgacattt tgacattgcc
     4981 gatatccaca tccgaaccat cggcttttac acgaactttg acgttgtagt ccactacgcg
     5041 ctttactgcg accagtgctt tcattgaacc ctcctaaaaa gaacgctgct ttcaccatcc
     5101 agcgaaacca aaccttcttc cctataaaac caaatccgtt ttccttaaaa acgaattcat
     5161 tcaaaaatct ttcggataat gcttgccgat tataccattt ttaaagcatt tactcaggct
     5221 ggtagatata cattcttatg cttaacaaac tgaaaaatat caggtgctat atcagtttca
     5281 gacaaccctt tagcctttgt ctgctgcaac acaatccatc aacgtttgat aaaccaaatc
     5341 tgcggtcgga atctgcccga tattgcccaa attttttgca attggcgaaa cctgaacgcc
     5401 tgttttaatc ggatcggtat cggtataaat gccgaccaca ggtttttcca aggcatttgc
     5461 caaatgcagc aaaccggtat ccacgccgac aattccgacc gcgtatttca gcagatacgc
     5521 tgcctgcaat aaatttattt tgtcgcacac aatagcaaac ggcagtccgt ctgcaatctg
     5581 tttggcacgc gttttttcat cttcatttcc ccaaggcagg taaatattgc attgctgttc
     5641 ttcattcaac ttttgcagca acgaccgcca gttttccaca ggccataact tactgtcccg
     5701 actggtcgca tgcaaagccg cataatacgg ctgcgctaaa tttttcagac agcctgcctc
     5761 aggaacagtc aagccaaata cctgcgtttc aggcatcgca tacccaaata cttgggcgaa
     5821 cagctcacga ttgcgccaaa cagcattttt ccctttcggt acagcatatg ttttcgcata
     5881 cgccagcgca gccagtccct cgcgcgcgct atttttatcc aaaccataaa taggggattt
     5941 cgccatttta gcgaaacacg cgcttttaat cagaccttga ctgtccaata caaaattaaa
     6001 tgcttcctgc cgcaaagtct gtttcagatg acccatttcc cgccaagttt cagcctgaaa
     6061 gagatgtttg cgccattgcc gccatttcat cacatggatt tttttcacaa acggatgcag
     6121 gcgcgcaata tctgtaaatc cagcttcaca cagccaatgg agttctacac cagggcattg
     6181 tcgcgccaaa tcctcaattg cgggcaaagt gtgaattaaa tcgcccatac tagacaaacg
     6241 gacaagcaaa attttcatat tttaagaagt atgtttcacg tgaaacaatt ttaacttatt
     6301 gattattaat gtatttttta atttcttcgg cgttttttaa gatgacagca ccggcagaac
     6361 gcatttcctg ccatgccgtt tcgatggtat ccggcgcaat accccgacaa gccgcttcat
     6421 tgacgataac ctgccaatta ccacctttaa gcaactgcaa aaccgttgtt ttcacacaat
     6481 aatccgtagc caagccgccg acaatgaccg tatccgtatt ttgacaacgc agccattcaa
     6541 tcagccctgt gctcagtttt tcctcaatat cgtgaaaaca cgcgccgtaa ggatgcaatt
     6601 caggatcaac acctttccaa acgcaataat cgtattcttt ggcagaaggc agtccgtcca
     6661 ataattcata gccgcgcgta ccgaccatcg catgagccac ccaagtcaaa tccgcatcag
     6721 gcaaacctgt cggcttcaac atatcaacag ggttatccac aagccatttt gctgccgcat
     6781 gatgcgcatc tttcgtcatc acgcgcaaat ccgccaaagc ggcttgggca ttcaactctt
     6841 caacaatcaa atgcccctcg ttcacaggca gctctttagg acacaaaggc gtaaacgttt
     6901 tttgtgcatc aacatcaatg gaaacaatca tctcattatt tcaacgcgat taaaatgccc
     6961 tgtattataa caaattactg cccaaaaacg gtaaaaccga ttgtgataag ataaggtttt
     7021 tccaaaaaaa cttatccaca accttatgac ttataccatt acccccatcg gcaccgcccg
     7081 atcgccctac aaacagaaat tcggcatcgc ccgccagccc ggtttagcct ctgccgcaga
     7141 agtatgcatc gagctgaatc ccgaatttac cgcagacagc gtgcgcgggc tggaagattt
     7201 cgattatgtg tggataagtt ttatttttca cggcgtattg gatgaaggct gggcgcaaat
     7261 ggtgcgcccg ccacggctcg gcggcaaaca aaaaatgggc gtgttcgcca cgcgcagccc
     7321 ccaccgcccc aaccatctcg gactctcgct cctgaaactc gaacgcatcg aaaccggcaa
     7381 acccgtccgc ctctattgca gcggcgcaga cctgttggac ggcacaccaa ttatcgacat
     7441 aaaaccctac atcccctttg tcgaatccaa acccgatgca tcatccggct tcgtcagcgg
     7501 caaacccgaa gagcttgaag ttgtatggct ggaaaacatc ggcgcggaaa atttatctga
     7561 aagcacccaa aacctaatca gccaaagcat tgcccaagac ccgcgccccg cctatcagga
     7621 tattcccgaa cggatttatg tgatgaatat tgcggattac gaagttaggt ttcaaatcga
     7681 agaaaaccgt gcaaccgtta ttgatctttc cccaaccccg ctttaaatcg ggcaaaaatc
     7741 cggttttgcc gcatagcagt tgaacaaacg gctgttgttt gttcgccata agccgcaata
     7801 tcaagttata gcggattaaa tttaaatcag gacaaggcaa cgaagccgca gacagtacaa
     7861 atagtacggc aaggcaaggt aacgccgtac tggtttaaat ttaatccact atacagataa
     7921 acaatgccgt ctgaacgcaa tgtgttcaga cggcatttac ttatccacag gtttgttcaa
     7981 gccttagatt ttgcctgcaa agtattccaa agtgcggacg agttggcagg tataggacat
     8041 ttcgttgtcg taccaggcaa cggttttcac cagttgttta ccgcccacgg tcatcacgcg
     8101 ggtttgggtc gcatcgaaga gcgaaccgta ttcgatgccg acaacgtcgg aagaaacaat
     8161 ttgatcttcg ttgtagccgt aagattcgct ggcggcggct ttcatcgcgg cgttgatttc
     8221 ttctttggtt acagggcgtt cgaggacgga aaccaattcg gtcagcgagc cggtggcaac
     8281 agggacgcgt tgggcggagc cgtcgagttt gccgttcaat tcggggataa ccagaccgat
     8341 ggccttggcg gcaccggtgc tgttgggcac gatgttgagc gcggcggctc gggcgcggcg
     8401 caaatcgcct ttgcggtgcg gcgcgtcaag ggtgttttgg tcgccggtgt aggcgtggat
     8461 ggtggtcatc agaccttcga ctacgccgaa ctctttttgc aggactgccg ccatcggggc
     8521 aaggcagttg gtggtgcagg aagcggcgga gataacggtt tcgctgccgt ccaaaatgtt
     8581 ttggttcacg ccatatacga cggttttcac atcattgccg ctaggtgcgg aaatcacgac
     8641 tttgcgcgcg ccggcacgga tgtgggcttc ggctttggtt ttattggtaa agaagccggt
     8701 acattcgagg acgacatcca cacccaactc gccccaaggc aattcttcgg gattcggatt
     8761 ggcgaaaact ttgatttctt tgccgtttac cacgatggca tcgtctttta attcggcagt
     8821 accttggaaa cggccttgcg tgctgtcgta tttgaaaagg tgcagcagca tttcggcagg
     8881 ggtcaggtcg ttgacggcga cgacttcgat gtcgtgggct ttttcaattt gacgcaatgc
     8941 gaggcggccg atgcggccga aaccgttaat cgctacttta atgctcatgt atatactcca
     9001 agctgtgaaa cgaaatttca atacctgtat tgtattctga aataaagtta cattccacta
     9061 ttacatctaa ctacttgatg cttatttgat atagatgaat tttactgttt gcacagattt
     9121 ccaaaacttt taccatcaat atttgaattt aaaattttaa tgatgatttt gatgattgcc
     9181 aacctgcttg tgcgtaagta gcaaatatcc aatattttca ttaccttttt gtcaaataag
     9241 tttgagttta agacttgctg tataagacag ataagcgtgg atgttttttg acttaataat
     9301 atttctgtgg ataactttgc tgttttccta gttgtctcca caaccttatt gacaggctta
     9361 cggtcagtct cattccgtcg aagacaaaac cttttgctac aataccgttt tcctaatgat
     9421 aaggcagccc catgtccaaa tccgccgttt ccccaatgat gcagcaatac ctcggcatca
     9481 aagcgcaaca taccgacaaa ctggtgtttt accgtatggg cgatttttac gagatgtttt
     9541 tcgacgatgc ggtagaagcg gcaaaacttt tggatattac cctgaccacg cgcggacagg
     9601 tggatggcga gccggtcaaa atggcaggcg tgccgtttca cgccgccgaa caatatctgg
     9661 cgcgcctggt caagttgggc aaaagcgtgg cgatttgcga acaggtcggc gaagtcggcg
     9721 cgggcaaagg gcctgtggag cgcaaagtcg tgcgcatcgt aacgcccggc acgctgaccg
     9781 attccgcatt gctggaagac aaggaaacca accgcatcgt tgccgtgtcc cccgacaaaa
     9841 aatacatcgg tttggcgtgg gcatcgctgc aaagcggcga attcaaaacc aagctgacaa
     9901 ctgtggataa attggacgac gaactggcgc gcctgcaggc ggcggaaatt ctgttgcctg
     9961 acagtaaaaa cgcaccgcaa cttcagacgg catcgggtgt tacgcgcctg aacgcgtggc
    10021 agtttgccgc cgacgcgggg gaaaaactgc tgacggaata tttcggctgc caggatttgc
    10081 gcggcttcgg tttggacggc aaagaacacg ccgttgcgat tggcgcggca ggtgcactgt
    10141 tgaactatat ccgtctgacg caaaacctga tgccgcaaca tttggacggc ctgtcgctcg
    10201 aaaccgacag ccaatatatc ggtatggatg ccgccacgcg ccgcaatctc gaaatcacgc
    10261 aaaccctctc cggcaaaaaa tcgccgaccc tgatgtccac gctcgacctt tgcgctaccc
    10321 atatgggcag ccgcctcttg gctctctggc tgcaccaccc tttacgcaac cgcgcccaca
    10381 tccgagcgcg ccaagaagcc gttgccgcgc tggaaagcca atacaaaccc ctccagtgcc
    10441 gtctgaaaag cattgccgac atcgaacgca tcgccgcccg tattgccgtg ggtaacgccc
    10501 gcccgcgcga cctcgccgcc ctgcgcgaca gcctgtttgc cctgtccgaa atcgaattgt
    10561 ccgccgagtg cagcagtctc ttaggaaccc tcaaagccgt tttcccggaa aacctatcca
    10621 cagccgaaca gctccgccaa gccattttgc ccgaaccttc cgtctggctg aaagacggca
    10681 atgtcatcaa ccacggtttt catcccgaac tggacgaatt gcgccgcatt caaaaccatg
    10741 gcgacgaatt tttgctggat ttggaagcca aggaacgcga acgtaccggt ttgtccacac
    10801 ttaaagtcga gttcaaccgc gttcacggct tttacattga attgtccaaa acccaagccg
    10861 aacaagcacc tgccgactac caacgccggc aaacccttaa aaacgccgaa cgcttcatca
    10921 cgccggaact gaaagccttt gaagacaaag tgctgactgc tcaagagcaa gccctcgcct
    10981 tagaaaaaca actctttgac ggcgtattga aaaaccttca gacggcattg ccgcagcttc
    11041 aaaaagccgc caaagccgcc gccgcgctgg acgtattgtc cacattttca gccttggcaa
    11101 aagagcggaa cttcgtccgc cccgagtttg ccgactatcc ggttatccac atcgaaaacg
    11161 gccgccatcc cgttgtcgaa cagcaggtac gccacttcac cgccaaccac accgaccttg
    11221 accacaaaca ccgcctcatg ctgctcaccg gccccaatat gggcggcaaa tccacctaca
    11281 tgcgccaagt cgcgctgatt gttttattgg cacacaccgg ctgttttgtg cctgccgatg
    11341 ccgccacaat cgggcccatc gatcaaatct tcacccgcat cggcgcatcg gacgatctcg
    11401 cctccaaccg ctccaccttc atggtcgaaa tgagcgaaac cgcctacatc ctgcatcacg
    11461 ccaccgaaca aagccttgtt ttaatggacg aagtcggacg tggtacttcc actttcgacg
    11521 gcctcgccct cgcgcacgcc gttgccgaac acctgctgca aaaaaacaaa tccttcagcc
    11581 tgtttgccac ccactatttc gagctgacct acctgcccga aacccacgcc gccgccgtca
    11641 atatgcacct ttccgcgctc gaacagggac aggacatcgt gttcctgcac caaatccaac
    11701 cggggcccgc cggaaaaagc tacggcatcg ccgtcgccaa actcgccggc ctgcctgtac
    11761 gcgcattgaa atccgcccaa aagcatttga acgaactgga agaccaagcc gccgcaaacc
    11821 gtccacaact ggatattttc agtaccatgc cgtctgaaaa aggagatgaa ccgaatgtgg
    11881 acagctttgt ggacaaagca gaggaaaaac attttgaagg tatattggca gcagccctgg
    11941 agaaactcga tcccgacagc ctgaccccgc gcgaagcatt gtcagaactg taccgtctga
    12001 aagatttgtg caaatccgta tcttaatttc cgttgtcgga acagcatcaa accatatgga
    12061 aaaatctgtg gataaatatt atctgacagg aagtttccaa acataaaaaa tgccgtccga
    12121 acagctcaga cggcatttgt ccattcggct taaaccttat ccatatccaa acgcataacc
    12181 gtaacccatt caccgttatg gaaatgtcgc ccgacaaccg cccagccgaa tgattcataa
    12241 aatatttgca catcaggcgt ataaagatac aagaacttta tccccagcga acgcgctgcg
    12301 cctatgcagt gggcgaccag cctcctgcca atgccttttc cgcgatattc aggtaaaaca
    12361 aagacatcac ccaaccaata ttcatactgt ggaaaacttt ccatatcatg ccgcttgacc
    12421 gcagccgaac ccaacagggt tccgaaatca tccacagccg caaaagccag cggcagttcg
    12481 tcatctttca aacatctgcc gtaataggca cgaatcttat ccacagaaga ccacggttca
    12541 aatccgtgcc actcctcaaa caacgcctga accaacctgc cgatatgccc ggctttcagc
    12601 cgtgtaatga aaacagtatt gtccacaaag agggaattca tcggtcaatt ccccgacgcc
    12661 ttcgttcccc ctgcgccgta aaccgcattc caagcatggt ccaaacgcac tccgatttgc
    12721 ctcagctctt cagcctgccg ggctttttgc gccattgctg caggaatttc cgcttccaaa
    12781 cgggcgatgt ctgcctgagc cgcctgcaac cgtctgcgcg catcttccaa atccgactgc
    12841 atcccgatga tttttccgtc cagattgttt tgcttttgca ataaggcgcg gtaaccggat
    12901 tggatgctga gcaaattgtc ttccgcatcc cccgcccata cgcttgtaga aaaaacaaaa
    12961 atcagaaaat acaatatttt tttcatgttc aacttccgtt tgaatgccgt ctgaagccgt
    13021 attccgacat cagacggcat cgcccatgcc tgtggataac ttaagcgcgg atgcgtttca
    13081 acacttcctc tttgccgatt aatgccaaca cagcatcgac gctgggggtt ttcgccgtac
    13141 cgcagacggc aaggcgcagg ggcatgccga gtttgcccat tttaatgcct tcttcgtcgc
    13201 agaagggttt gaagaggtcg tggatggctt cggtattcca gtcttccagc ccttcgaggc
    13261 gttcggcgaa gcgcagcata cgggcggcgg cttcatcgtc ccagtgtttc tgcacgtccg
    13321 cttcagtagg cgtttgtttg acgtagaagt agaggcactc gtcggcaagt gtgttcaggt
    13381 cttgggcgcg gtctttgacc agtgccaaca cgtcttccaa tgcaggtttt tcagtttcat
    13441 ggatatcgcg cagagcgaga cgcggtttga cgagttcggc gagtttgccg ttgggcgtga
    13501 ttttgatgtg ttcgccgttg atccagtaga gtttcttcaa atccatgcgg cttggagatg
    13561 gagaaacgtc tttcaaatca aaccattcga taaattgttc catcgtgaag aactcatcgt
    13621 cgccgtgcgc ccagcccaaa cgtgccagat agttgagcat ggcttcgggc aggatgccca
    13681 tcgcgccgaa atcggtaatg gcaacggtat cgccgctgcg tttggagatt tttttgcctt
    13741 gttcgttaag aatcatcggc aggtggccgt attcaggcag ggtagcgccg atggctttta
    13801 agatgttgat ttgtttcggg gtgttgttca catggtcgtc gccccggata acgtgggtaa
    13861 cgcccatgtc gtagtcgtcc acgacaacgc agaagttgta ggtcggcgtg ccgtcggcgc
    13921 gggcgataat caggtcgtcg agtgcttcgt tggggatgga gatttcgcct ttgaccaagt
    13981 ccgtccactt ggttacgcca tccaaaggcg ttttgaagcg gacgacgggt tgcacgccgg
    14041 cagggatttc gggcagggtt ttgcctgctt ccggccgcca gcggcggtcg taagtcgccg
    14101 tgccttcttt ttcggctttc tcgcgcatgg cttccaactc ttctttgctg caatagcagt
    14161 agtaggcatc gcctttttct aaaagttcgg cgatgacttc tttatagcgg tcgaaacggc
    14221 gggtttggta cacgacgttg ccggcgttgt cgtaatcgag tccgacccat ttcatgccgt
    14281 cgaggatgat gttgacggat tcggcggtag aacgcgccaa gtcggtgtct tcgatgcgca
    14341 ataaaaattc gcctttatga tggcgggcaa acgcccacga aaacaaggcg gtgcgaacgc
    14401 cgccaatgtg caggtagccg gtggggctgg gggcgaaacg ggttttgacg gtcatgatgg
    14461 ctccgaaatc tttgaaagcg tttattttac tggttttacc gtgcttgggc atcaaaaatg
    14521 ccgtccgaac cctgcctgcg gataagtttc agacggcatt ttctaccgct tcaatcagac
    14581 agccatccca aaaagcggct gccccatttt tccaaacggt agagggataa cgcatatccc
    14641 tcttgcagca taaagatttt tttcttattt cccgcatcaa accgcgtggt cggggtggca
    14701 gacatataaa cgcggacacc caaatcctcc gccatttccg ccgcccgcgc caaatggtag
    14761 ggatcgctga caatcaccac gctgtcaata ccgttggcac gcaaaaccgg acggatgttg
    14821 tttaggtttt cataagtgtt gcgcgaagtg ttttcaaaca ggatgttgcg cgccggaacc
    14881 ccctgtttga gcgcgtaccg ccgcccgacc tcggcttcgg tcatatagcc ttttttggtt
    14941 cgccctcccg taaacacgat tttgcctacc ctgcggctct gataaagcgc gatggcgtgg
    15001 ttgatgcgtt cgcggaaaac cggggaaggg cgtttgtccc acgcggcggc gcccaacacc
    15061 agcgcggcat ccgcccggac atacggcggc aaaacctgcc cgcccgtccg ataaaccgcc
    15121 caaacggatg aggcaaacac cagcaaaagc ggaaaaacac tcaaacagaa accgcccaac
    15181 aggtaatagc gcaagccgtt gcggctgcaa aacagccgtt tgttcacaat atcgcttcga
    15241 tattttccag aggcctgccg acagccgcct taccgttcgc caaaacaatc ggacgctcca
    15301 acagggcggg atgctcggcg atggcacgca gcagcgcgtc attgtccaaa tcggggttgt
    15361 ccaaacccaa ttccttgtac aaatcatctt tcacacgcat catcccgcgc gccgatgcca
    15421 agcccaattt gttgaaaata tccttcaatt cggacaagtc gggcggcgta tccaaatatt
    15481 tgaccacttc ggcagcaatg ccgcgttctt ccaataggga caaggcggca cgcgatttgc
    15541 tgcaacgcgg attgtggaaa attttgattt caggcatgac atttccttgc ttctcaacaa
    15601 tccccttatt atcggcttac gcagggtttt actcaatatc ccgcccccaa ccgtaccaaa
    15661 cggtttacaa tacccgaatc gacatacaaa ggacaaaacg atgaaatact tgaatcttgc
    15721 cgcaatcgcc cttgccgcca catttgccgc acataccgcc tcggcagacg aacttgccgg
    15781 atggaaagac ggtaccgcgc aaagcctgca atcgctcaaa gcccccgtac gcatcgtcaa
    15841 cctgtgggcg acttggtgcg gcccgtgccg aaaagagatg cccgccatgt ccaaatggta
    15901 caaagcgcag aaaaaaggca gcgtcgatat ggtcggcatc gcgctcgaca catccgacaa
    15961 tatcggcaac ttcctcaaac aaactcctgt ttcctacccg atttggcgtt acaccggggc
    16021 gaacagccga aactttatga aaacctacgg aaacactgtc ggcgtactgc cctttaccgt
    16081 cgtcgaagca ccgaaatgcg gatacaggca gaccattacc ggggaagtga acgaaaaaag
    16141 cctgaccgaa gccgtcaaac tcgcccattc aaaatgccgt taaacgccgg atgccgtctg
    16201 aagccgcttc agacggcatt tttcccgccc gaccttcata tccgccaaac ttatccacta
    16261 tctaaaagca ggcggaatct ttataatcgg cactgtctta cctattgttc agacggcata
    16321 tccctgcgga cgcaaccgcc cgaaacgata tgccgccctt ccttacagga cctcctatga
    16381 tccgtttcga acaagtttcc aaaacctatc ccggcggttt tgaagccctg aaaaacgtca
    16441 gcttccaaat caacaaaggc gagatgattt ttatcgcagg acactccggt tcaggcaaat
    16501 ccaccgtcct caagctgatt tcgggcatta ccaaaccaag caggggcaaa gtccacttca
    16561 acaaccaaga cctcggcaca ctgaccgaca accaaatcgg ctttatgcgc caacacatcg
    16621 gcatcgtgtt ccaagaccac aaaatcctct acgaccgcaa cgtcctgcaa aacgtcatcc
    16681 tgccgcttcg gattatcggc tatccgccgc gcaaagccga agaacgcgcc cgcatcgcca
    16741 tcgaaaaagt cggcctgaaa ggacgagaat tggacgatcc cgtaaccctc tccggcggtg
    16801 aacaacaacg cctgtgcatc gcccgcgccg tcgttcacca gcccggcctg ctgattgccg
    16861 acgaaccctc cgccaacctc gaccgcgcct acgcgctcga catcatggaa ttgttcaaaa
    16921 ccttccacga agcgggaaca accgtcatcg ttgccgccca tgacgaaacc ctgatggcgg
    16981 actacggaca ccgcatcctg cgcctctcga aaggacgact cgcatgagca tcatccacta
    17041 cgcctcgctg cacatcgaat ccgcccgcac cgcgctcaaa gagcttctgc gccaaccctt
    17101 cggcacgctg ctcaccctcc tgatgctcgc cgtcgcgatg accctgccgc tgtttatgta
    17161 tttgggcatt caaagcgggc aaagcgtgtt gggcaaactc aacgagtcgc cgcaaatcac
    17221 cgtctatatg gaaaccgccg ccgcacaaag cgacagcgat accgtccgca gcctgctggc
    17281 gcgcgacaaa cggatcgcca acgtccgctt catcggcaag gaagacggct tggcggaatt
    17341 acagtccaac ctcgaccaaa atttggtttc gatgctcgac ggcaacccgc tgcccgacgc
    17401 atttatcgtt acccccgacc ccgcgacaac gcccgcgcaa atgcaggcaa tctaccggga
    17461 cattaccaaa ctgcctatgg tcgaatccgc gtctatggat accgaatggg tgcaaacgct
    17521 gtaccaaatc aacgaattta tccgtaaaat tttatggttt ctttccctga cgctgggtat
    17581 ggcgttcgtc cttgtcgcac acaacaccat ccgcctgcaa atcctcagcc gcaaagaaga
    17641 aatcgaaatc accaaactct tgggcgcgcc cgcatcgttc atccgccgcc ccttccttta
    17701 tcaggcaatg tggcagagca tcctttccgc cgccgtcagc ctagggcttt gcggttggct
    17761 gctttccaca gtgcgcccct tggtcgatgc catcttcaaa ccctacgggc tcaatatcgg
    17821 ctggcgtttc ttttatcctg aagaaatcgc gctggtgttc ggcttcgtca tcgcgttggg
    17881 cgtattcggc gcgtggcttg ccaccaccca gcacctgctc ggcttcaaag ccaaaaaata
    17941 aaacaccgtc aaaaatgccg tccgaacccg ttttcagacg gcatttcaat ttgccagtat
    18001 aatggcgcat ttttccaaca aggaacctac catgctgacc tcggaacaag taaaagccat
    18061 gattgaaggc gtggcaaaat gcgaacatat cgaagtagaa ggcgacggac accatttttt
    18121 cgccgtcatc gtttcatcag aatttgaagg caaggcacgc ctcgcgcgcc accgcctgat
    18181 taaagacgga ctcaaagccc aactggaaag taacgaactg cacgcacttt ccatttcggt
    18241 tgccgccact ccggcggaat gggcagccaa agcacaataa tcgccacaca aaaatgccgt
    18301 cagaaacagc acaacgtttc agacggcatt ttttatatca aaccgcttac gcgccgcgtt
    18361 tttccaaagc ggctacggca ggcaactctt taccttccaa gaactcaaga aacgcgcctc
    18421 cgccggtaga aatatagccg atttggtcgg taacgccgaa tttagcaatc gccgccagcg
    18481 tgtcgccacc gcctgcaatc gagaatgctt tgctttgggc aatggcttcg gcaagagctt
    18541 tcgtgccgcc tgcgaattga tcgaactcaa acacgccgac agggccgttc catacaaccg
    18601 taccggcagc tttgagcaaa tcggcaagct cggcggcgga tttcgggccg atgtccaaaa
    18661 tcatatcgtc ttcggcaacg tcggcaatgt ctttcacgac cgcttcggca tcggcggtaa
    18721 aggctttggc aacgacgaca tcggtcggca gcggcacaga accgcctttg gccgccattt
    18781 ttgccataat ttttttggat tcttccacca aatcgtgttc cgccaaagat ttgccgatgg
    18841 ctttgccttc cgccaacagg aaggtgttgg caatgccgcc gccgacgatg agttggtcga
    18901 ctttgtccgc cagcgattcg aggatggtca gcttggtgga cactttgctg ccggcaacga
    18961 tggcaaccat cgggcgcgcg ggctgtttca aggctttgcc caaagcgtcg agttcgcccg
    19021 ccatcaatac gccggcgcag gcaacgggag cggcttgggc gacggcttcg gtcgaggctt
    19081 gggcgcggtg cgcggtgccg aacgcgtcat tgacgaacac gtcgcacaaa gaagcgtagg
    19141 ctttgcccag ttccaaatcg tttttcttct cgcctttgtt gatacgcacg ttttgcagca
    19201 tcacgacatc gcccgcgttc aaagccggtt tgttttcgcg ccagtcgttc aatactttca
    19261 cgtttttgcc caacaggccg cccaaatgcg cggcaacggg cgcaacgtcg tcttcggggt
    19321 ggaactcgcc ttcggtcggg cggcccaagt gggtcatcac gataacggat gcgccgttgt
    19381 ccatgcagta ttggatggac gcgagcgagg cgcggatacg ggtgtcgtcg ctgattttgc
    19441 cgtctttgaa cggcacgttc atatcggcgc ggatgaggac ggttttgccc tgcacgtttt
    19501 gttcggtcag ttttaaaaat gccataatca gtccttttca atcagtgttt gcgatacaga
    19561 aacaat
//
LOCUS       DAWGBY010000026        19377 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.026, whole genome shotgun sequence.
ACCESSION   DAWGBY010000026 DAWGBY010000000
VERSION     DAWGBY010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19377
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.026"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..79)
                     /locus_tag="WHG62_000813"
     CDS             complement(<1..79)
                     /locus_tag="WHG62_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ1724949.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="WHG62_000814"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="WHG62_000814"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ1724950.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="WHG62_000815"
     CDS             complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="WHG62_000815"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ1724951.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRTFLLESVGQTGG
                     HFASNLGAVELTVALHYVYNTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKQLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGEKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLNDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="WHG62_000816"
     CDS             complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="WHG62_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ1724952.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQDLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCVWLVERGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLVGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4804..5868
                     /locus_tag="WHG62_000817"
     CDS             4804..5868
                     /locus_tag="WHG62_000817"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ1724953.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            5888..6847
                     /locus_tag="WHG62_000818"
     CDS             5888..6847
                     /locus_tag="WHG62_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding family protein"
                     /protein_id="HEZ1724954.1"
                     /translation="MPSEPLFGRHLIFASLTCLIDAVCKKRYHNQNVYILSILRMTRS
                     KPVNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTAPLDHKDKSLQSLTLD
                     QSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGQLITLESGE
                     FQIYKQDHSAVVALQIEKINNPDKIDSLINQRSFLVSGLGGEHTAFNQLPGGKAEYHG
                     KAFSSDDPNGRLHYSIDFTKKQGYGRIEHLKTPEQNVELASAELKADEKSHAVILGDT
                     RYGSEEKGTYHLALFGDRAQEIAGSATVKIREKVHEIGIAGKQ"
     gene            6986..7663
                     /gene="tsaB"
                     /locus_tag="WHG62_000819"
     CDS             6986..7663
                     /gene="tsaB"
                     /locus_tag="WHG62_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ1724955.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETRLFHQEAGSRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERKART"
     gene            7660..8100
                     /gene="rimI"
                     /locus_tag="WHG62_000820"
     CDS             7660..8100
                     /gene="rimI"
                     /locus_tag="WHG62_000820"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ1724956.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGGIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWFAHLPEDTQRLLLE
                     VRAGNTAAQALYAAHGFTDAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            8094..8831
                     /locus_tag="WHG62_000821"
     CDS             8094..8831
                     /locus_tag="WHG62_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ1724957.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAVAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDATYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8893..9534
                     /gene="pyrE"
                     /locus_tag="WHG62_000822"
     CDS             8893..9534
                     /gene="pyrE"
                     /locus_tag="WHG62_000822"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ1724958.1"
                     /translation="MTDFRQDFLKFSLAQNVLKLGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9608..10042
                     /locus_tag="WHG62_000823"
     CDS             9608..10042
                     /locus_tag="WHG62_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724959.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10039..11349
                     /gene="argA"
                     /locus_tag="WHG62_000824"
     CDS             10039..11349
                     /gene="argA"
                     /locus_tag="WHG62_000824"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ1724960.1"
                     /translation="MIVPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFYLDMLQTAASAAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGASDGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEAELPETRRKDYRSNGRNSHILVRRLHR"
     gene            11445..13460
                     /locus_tag="WHG62_000825"
     CDS             11445..13460
                     /locus_tag="WHG62_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ1724961.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANSETRARFLNNDKARALS
                     DGILAQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIAEDGMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPNDCDVAGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVRGRLKAWRFADGKWQEVELPRLPSGALEMTDQPWGGDVVYLAAGDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGECIPYFHVGKNATPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPEHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSAQSWLYSPDGGGHTGNGTQRESADELACVLLFLKEFLG"
     gene            complement(13574..14530)
                     /locus_tag="WHG62_000826"
     CDS             complement(13574..14530)
                     /locus_tag="WHG62_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1724962.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRSFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            14766..15731
                     /locus_tag="WHG62_000827"
     CDS             14766..15731
                     /locus_tag="WHG62_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1724963.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAGKE"
     gene            complement(16532..16669)
                     /locus_tag="WHG62_000828"
     CDS             complement(16532..16669)
                     /locus_tag="WHG62_000828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724964.1"
                     /translation="MASFSGRSCNESVIGFDVSLRLTALSLTLSHRERGRVAVASLFA
                     A"
     gene            16715..17038
                     /locus_tag="WHG62_000829"
     CDS             16715..17038
                     /locus_tag="WHG62_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ1724965.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            17152..19319
                     /locus_tag="WHG62_000830"
                     /pseudo
     CDS             17152..19319
                     /locus_tag="WHG62_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
BASE COUNT         4390 a         6037 c         5236 g         3714 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccaaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatac agccgtcctg
      121 accgattaaa ttcatatttt aaaacaatat tctgtttaca aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgtgga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgcccaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctcattc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtg aaagaaatca acctcttggg acaaaacgtc aacgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgc atcgtccacg
      961 aaatccccgg catcgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt atgcctgagc agcgatttca
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acattgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgca cgacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaaccat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccaact gcaagcccgt accgccaaca
     1501 accgcgtcgt caacttcacc ggcacgcccg acatgattaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaagttgt cgaagcctaa accctcacgc
     1621 cgaaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgacgg
     1681 cgcggccggg cggcttaatt tgccgcatcc cgatccgaca gccacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa gcccaaatcg ttcaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacgaagcgc
     1981 atatcggcga cggtggcgtt cagtttttcg gcaaccgcca atgcgggggc gaccatactg
     2041 ccgaaggcaa tgaatgcggt tttctcacct tcgcggcgga taatgccctt gccgatttcc
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg cgtctgcctg atagcaggtc gaaagcaaca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat gttcggcacg cagcgcaaaa agctcaaatc gtacagaccg
     2281 gcatgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggt
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catcccttcg caagccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg cgatgccgac atcgaaatag cggtcgggga atcgttgttc aaactcaacc
     2521 aagccgctgc cctcgcgcat ggcgggggta atcgcaacca gtcgggaatc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcggc gggcttgggt
     2641 tctttttcag acggcatttg cgccgcgctt tctttaggca ggttggcgac ggcgtggtat
     2701 ttgacgggat cgttttcggc gagtttgtag ccgttgccct ttttggtgat gacgtgcagc
     2761 aactgagggc ctttgcggct gcgcaagtct ttcaatacgt ccaccagatt ttcgacgttg
     2821 tgcccgtcca cgggaccggt gtagcggaag ccgaagtttt caaacagcga cagcgactgt
     2881 ttggcgtgtt cggcttcttc ggcaagggtt ttgattttat gttcgacttt ttgggcaaac
     2941 tccatcgcgc cgggtatttt gtctaatacc ttgcccgttt gcgctttgac ggtactcaac
     3001 agtccgtgca tatcgcgcac gacgttgctg gcaaggtatt tgggcaacgc accgacgttg
     3061 ggggaaatcg acatttcgtt gtcgttgagg acgaccagca aatccacatc catatcgccc
     3121 gcgcagttca aggcttcaaa cgcctgaccc gccgtcatcg cgccgtcgcc gatgatggcg
     3181 acgctgcggc ggtcgctgcc caactgtttg tccgccgccg ccatgcccaa cgccgcgccg
     3241 atggaggtgg aggaatgccc cacgccgaac gcgtcgtact cggactcgca acgtttcgga
     3301 aaacccgcca aaccgccata ttggcgcatg gtgtgcatct ggtttttacg tccggtaaga
     3361 attttgtgcg gatagctttg gtgtccgaca tcccacacca gcttgtcttc gggcgtgttg
     3421 taaacgtagt gcagcgcaac cgtcagctcg accgcgccca aattgctggc gaaatgcccg
     3481 ccggtctgcc cgacagattc cagcagaaag gtgcgcaact cgccggcaag gcgcggcagc
     3541 tgttttttgt ccagacggcg caaatcttgc gggctgtcaa tcaggtcgag tagggggctt
     3601 gggttcatgg tgtgtctttt ttatgtgtcg tccgggtgca acggccaatt atatatcaag
     3661 agcgtgcggc tgacggctga ttttgccgta tgtcattcgt cctgccgctt ggcgcgcggg
     3721 tgggcttcgt catacaggcg ggcgatgtgg tcgaaatcga gcttggtata aatctgcgtg
     3781 gtcgaaaggc tgctgtgccc gagcagctcc tgcaccgccc tgatgtcgcg cgaagcctgc
     3841 aacaggtgtc cggcgtagct gtggcgcatc atatgcggcg aaacgtgcct gccgtcgccg
     3901 ttttgcgccg cccattgcgc caaacgtttt tggatttggc gttggctcag gcgcgtgccg
     3961 ttcctgccgg taaacagggc tttgccgtcc gatgccgtct gacgcagcgg cagatagttt
     4021 ttcagggctt ccacgctttt gccgaccagc ggcacctgcc gctgcttgcg ccctttgccg
     4081 gtaacgtgta cccacgcctc gtccaaatag acatcatctg cattcaagcc gtgtatctcg
     4141 ctcacgcgca aaccgctgcc gtacatcagt tcgaacaggg cgtggtcgcg caccgccagc
     4201 gggtcgccgc cgtccacggg caaatccagc atccggttca gccattcctg cggcagtgct
     4261 ttgggtacgc gctcgggctg cttcggcggt ttgatgtcgg cggtcgggtc ggtatgcagc
     4321 agaccgcgtt ccaccagcca aacacaatac tgccgccaag acgacagctt gcgcgccagc
     4381 gtccgcgcat tcaaaccgcg ctgcgacagc cgccgcaacg ccgccgtaaa atcgcgccgc
     4441 gacaagtcct gcggcacgcc gcctgcatct tcagacggca tttgtgccaa cagcgcaaac
     4501 agttcttcca aatcgcgccg gtatgccgcc accgtgtgct ccgacttgcc ctcgcgcacg
     4561 atgttttcca aataagcgtc aaaatgcgcc gcaaacccgt ccaaaaccat aaccgcccca
     4621 cacaaatatc aaaaaaacag tgaaaacatt atcataaacg acacaccaaa accccgaacc
     4681 gcccaaaatc cgacccgtcc gcccgccgtt atcgttaaca taaaatcaat gagccgttta
     4741 tggttttttg ccgcaaaaaa cattataatc cgccttattt acctattgcc caaggagaca
     4801 caaatggcac tcgtatccat gcgccaactg cttgatcatg ctgccgaaaa cagctacggc
     4861 ctgcccgcgt tcaacgtcaa caacctcgaa caaatgcgcg ccattatgga agccgccgac
     4921 caagtcaacg cgcccgtcat cgtacaggcg agtgcaggtg cgcgcaaata tgcgggcgcg
     4981 ccgtttttgc gccacctgat tctggcggca gtcgaagaat ttccgcacat ccccgtcgtg
     5041 atgcaccaag accacggcgc atcgcccgac gtgtgccaac gctccatcca actgggcttt
     5101 tcctccgtga tgatggacgg ctcgctgatg gaagacggca aaaccccttc ttcttatgaa
     5161 tacaacgtca acgccacccg taccgtggtt aatttctccc acgcttgcgg cgtatccgtc
     5221 gaaggcgaaa tcggcgtgtt gggcaacctc gaaactggcg aagccggcga agaagacggt
     5281 gtaggcgcag tgggcaaact ttcccacgac caaatgctca ccagcgtcga agatgccgtg
     5341 cgtttcgtta aagataccgg cgttgacgca ttggcgattg ccgtcggcac cagccacggc
     5401 gcgtacaaat tcacccgtcc gcccacaggc gacgtgttgc gtatcgaccg catcaaagaa
     5461 atccaccaag ccctgcccaa tacacacatc gtgatgcacg gttccagctc cgttccgcaa
     5521 gaatggctga aagtcatcaa cgaatacggc ggcaatatcg gcgaaaccta cggcgtgccg
     5581 gttgaagaaa tcgtcgaagg catcaaacac ggcgtgcgca aagtcaacat cgataccgac
     5641 ttgcgccttg cttccaccgg cgcggtacgc cgctaccttg ccgaaaaccc gtccgacttc
     5701 gatccgcgca aatatttgag caaaaccatt gaagcgatga agcaaatctg cctcgaccgc
     5761 tacctcgcgt tcggttgcga aggtcaggca ggcaaaatca aaccggtttc cttggaaaaa
     5821 atggcaaacc gttatgccaa gggcgaattg aaccaaatcg tcaaataaca ggttgcttgt
     5881 aaacaaaatg ccgtctgaac cgttgttcgg acggcatttg atttttgctt ctttgacctg
     5941 cctcattgat gcagtatgca aaaaaagata ccataaccaa aatgtttata tattatctat
     6001 tctgcgtatg actaggagca aacctgtgaa ccgaactgcc ttctgctgcc tttccctgac
     6061 cgccgccctg attctgaccg cctgcagcag cggaggcggc ggtgtcgccg ccgacatcgg
     6121 cgcggggctt gccgatgcac taaccgcacc gctcgaccat aaagacaaaa gtttgcagtc
     6181 tttgacgctg gatcagtccg tcaggaaaaa cgagaaactg aagctggcgg cacaaggtgc
     6241 ggaaaaaact tatggaaacg gcgacagcct caatacgggc aaattgaaga acgacaaggt
     6301 cagccgcttc gactttatcc gtcaaatcga agtggacggg cagctcatta ccttggagag
     6361 cggagagttc caaatataca aacaggacca ctccgccgtc gttgccctac agattgaaaa
     6421 aatcaacaac cccgacaaaa tcgacagcct gataaaccaa cgctccttcc ttgtcagcgg
     6481 tttgggtgga gaacataccg ccttcaacca actgcccggc ggcaaagccg agtatcacgg
     6541 caaagcattc agctccgacg acccgaacgg caggctgcac tactccattg attttaccaa
     6601 aaaacagggt tacggcagaa tcgaacacct gaaaacgccc gagcagaatg tcgagcttgc
     6661 ctccgccgaa ctcaaagcag atgaaaaatc acacgccgtc attttgggcg acacgcgcta
     6721 cggcagcgaa gaaaaaggca cttaccacct cgctcttttc ggcgaccgag cccaagaaat
     6781 cgccggctcg gcaaccgtga agataaggga aaaggttcac gaaatcggca tcgccggcaa
     6841 acagtagcat ttgaaaaatg ccgtccgaac acgataattt accgttcgga cggcattttt
     6901 gcgccatacc gccctaggac acgacggcac ggcaggcaag ccgatttcac tatataatgc
     6961 cgtctgaacc aacgagaacc acaccatgca agccgatttc aaccgccccg tcctcgccgt
     7021 cgataccgga acttcctatt tgtcgctcgc gctgcgcgcc gacggcgaaa cccgcctgtt
     7081 ccatcaagag gccggcagcc gccaatccga actgattctg ccggaaatcc gcactctatt
     7141 ccgaaatgcg ggcattaccg ccgccgattt gggggcgatt gtttatgcga aaggccccgg
     7201 cgcgtttacg ggactgcgta tcggcatcgg cgtggcgcaa ggtttggcaa cgccgtttga
     7261 tacgccttta atcggcatcc ccacgctcga tgccgccgcc tcgctgccgc cgccgcaaag
     7321 ctgcatactc gccgctgcgg acgcgcgtat gggcgaagtg ttttatgcgt ggttcgacac
     7381 gctgaaccgc cgccgtttga gcgattatca ggtcgggcgg gcggcagaca tccggctgcc
     7441 ggagggatgt gccttttcag acggcatagg cagcgcgttc gcgttggaag aaacgccgcc
     7501 gttttcaggc aaacccgata tgccgaccgc cgccgacttc ctcaatctgg cggcggaagg
     7561 cggttttccc gccgtcgctg ctgcacacgc cgaactgctc tacgtccgca acaaaatcgc
     7621 cctaaccgcc aaagaacagg cggaacggaa agcccgaaca tgaacatccg ccgcgcctca
     7681 ccgtccgact gcgccgcact cgccgcgctc gatgccgtct gcaacccgtc cgcgtggacg
     7741 caacgccaat ttgagtccgc attggtttcg ccgtccgaac aggttttcct cgcggaaaaa
     7801 gacggcggga ttgccgcctt tatcgtttgg cagaacctgc ccgacgaatc cgaactgcac
     7861 ctgattgcca ccgcgcccga atgccgccgc cgtggcgttg cgtccgccct gctcgaatat
     7921 tggttcgcac atctgcccga agacacgcaa cgcctgctgc tcgaagtccg tgcaggcaac
     7981 accgccgcac aggcactgta cgcggcgcac ggctttaccg atgcgggcag gcggaaaaac
     8041 tattaccgta cagccgacgg taaaaccgaa gatgctgtct taatggagaa aatatgttaa
     8101 gcgcgcgcta cctccacctg cacgaagctt tgggtttagg cccgatgtgg ctgaaacagg
     8161 ccgtcgccgt cctgccgccc aaaaacacac ccgcaacccc ggcacaggca cgtcctcaaa
     8221 ccgtccgcgc cgccccgatc cgcccttccc aaccccataa cggtcaggcg cggctcgaaa
     8281 cgatgaaagc gttggaaacc gccgccgtac atacgcgcaa acccgcgcct gaaaccgaaa
     8341 cgcccccgcc cggcctttca gacggcatcg cccccgttcc cgccgcttcg ggcataacca
     8401 aacttgccgt cgtcagcctt tgcccaccga ttgaggatgc ggtttacggg caactgttct
     8461 acggcaaagc gggtgttctg cttgacaaca tactcaaagc cgtaggactg gatgccacct
     8521 atgtccacaa aacctgttgg gtgaaaaccg ccgccgtcgg caacccgatg ccgtctgaag
     8581 cggcaatcga aaccgcgacg gtttccgtca tgcaggaact cgacggctgc cgcgcccccg
     8641 ccgtcctatt cctcggacag gcttttgtcc agcctgaacg gcaaacgatg attgaaactt
     8701 tgtgcggcag ccgtcccttc ttcatcatcg accatcccgc ccggctgttg cgccaacccg
     8761 aacttaaagc ccgcgcctgg caggtgttga aacagttgaa acgcgccttg cggcaaggcg
     8821 gcggcagttg aagcgcaccg cacggggcgg tagaatcgca actgcgtccc aatatctgac
     8881 agaaagcaca aaatgaccga tttccgccaa gatttcctca aattctccct cgcccaaaat
     8941 gttttgaaac tcggcgaatt taccaccaaa gccggacggc ggtcgcccta tttcttcaat
     9001 gccggcctct ttaacgacgg cttgtccacg ctgcaactgg caaaatttta cgcacaatcc
     9061 atcattgaaa gcggcatccg attcgatatg ctgttcggcc ccgcctacaa aggcattatt
     9121 ttggcggcgg caaccgcgat gatgctggcg gaaaaaggcg tgaacgtccc gtttgcctac
     9181 aaccgcaaag aagccaaaga ccacggcgaa ggcggcgtgt tggtcggtgc gccgcttaaa
     9241 ggccgcgtgc tgattatcga cgacgtgatt tccgccggca catccgtacg cgaatcgatc
     9301 aagctgattg aagcggaggg cgcaaccccc gccggtgtcg ccatcgcgct cgatcgcatg
     9361 gaaaaaggca cgggtgagtt gagcgcggtt caggaagtgg aaaaacaata cggtctgccc
     9421 gtcgccccca tcgccagcct gaacgatttg tttattctgt tgcaaaacaa ccccgaattc
     9481 ggacagttcc tcgaacccgt ccgagcctac cgtcggcagt acggcgtaga ataaaaacaa
     9541 agcatatgcc gtccgaaccg ccttacgcct cagacggcat caaacctgac acacacgagg
     9601 aaataccatg cccgcctgtt tctgccccca ctgcaaaacc cgtctctggg tcaaagaaac
     9661 ccaactcaat gtcgcccaag gcttcgtcgt ctgccaaaaa tgcgaaggac tgtttaaagc
     9721 caaagaccat ctggcaagca cgaaagaacc catattcaac gatttgcccg aggctgtttc
     9781 ggatgtcaaa ctcgttcacc gtatcggcac gcgcgccatc ggcaagaaac agatttcccg
     9841 tgacgaaatc gccggcatcc tcaacggcgg cacaacccag cccgatattc cgcccgcaac
     9901 cgccgccacc cctgctgccg caccgcaggt taccgtaccg cccgccgcgc ccgcccgtca
     9961 ggatgggttc aactggacga ttgcaaccct gtttgccctt atcgtcctca ttatgcagct
    10021 ttcctacctc gtcatcctat gatcgtgccc gacctctttg tcgcccactt ccgcgaagcc
    10081 gccccctaca tccgccaaat gcgcggcaaa acgctggtcg ccggcataga cgaccgcctg
    10141 ctcgaaggcg ataccttaaa caagctcgcc gccgacatcg ggcttttgtc gcaactgggc
    10201 atcaggctcg tcctcatcca cggcgcgcgc cacttcctcg accgccacgc cgccgcgcaa
    10261 ggccgcacgc cgcattattg ccggggcttg cgcgttaccg acgaaacctc gctcgaacag
    10321 gcgcagcagt ttgccggcac cgtccgcagc cgttttgaag ccgcattgtg cggcagcgtt
    10381 tccgggttcg cgcgcgcgcc ttccgtcccg ctcgtatcgg gcaacttcct gaccgcccgt
    10441 ccgataggtg tgattgacgg aaccgatatg gaatacgcgg gcgttatccg caaaaccgac
    10501 accgccgccc tccgtttcca actcgacgcg ggcaatatcg tctggctgcc gccgctcgga
    10561 cattcctaca gcggcaagac cttctatctc gatatgcttc aaaccgccgc ctccgccgcc
    10621 gtctcgcttc aggccgaaaa actcgtttac ctgacccttt cagacggcat ttcccgcccc
    10681 gacggcacgc tcgccgtaac cctctcggca caggaagcgc aatcgctggc ggaacacgcc
    10741 ggcggcgaaa cgcgacggct gatttcgtcc gccgttgccg cgctcgaagg cggcgtgcat
    10801 cgcgtccaaa tcctcaacgg tgcctccgac ggcagcctgc tgcaagaact cttcactcgc
    10861 aacggcatcg gcacgtccat tgccaaagaa gccttcgtct ccatccggca ggcgcacagc
    10921 ggcgacatcc cgcacattgc cgccctcatc cgcccactgg aagaacaggg catcctgctg
    10981 caccgcagcc gcgaatacct cgaaaaccac atttccgaat tttccatcct cgaacacgac
    11041 ggcaacctgt acggttgcgc cgccctgaaa acctttgccg aagccgattg cggcgaaatc
    11101 gcctgccttg ccgtctcgcc gcaggcacag gacggcggct acggcgaacg cctgcttgcc
    11161 cacattatcg ataaggcgcg cggcataggc ataagcaggc tgttcgcact gtccacaaat
    11221 accggcgaat ggtttgccga acgcggcttt cagacggcat cggaagccga gttgcccgaa
    11281 acgcggcgca aagactaccg cagcaacgga cggaactcgc atattctggt gcgtcgcctg
    11341 caccgctgac cgcaacggaa agccgccgca gaaatgccgt ctgaaccctg tttcagacgg
    11401 catttccccg attataaaga cctgcccaac cctcaaggac cccgatgaaa tcctaccccg
    11461 acccctaccg ccattttgaa aacctcgatt ccgccgaaac gcaaaacttc gctgctgaag
    11521 cgaattccga aacgcgcgcg cgttttttaa acaacgacaa ggcgcgcgcg ctttcagacg
    11581 gcattttggc gcagatgcag gacacgcggc agattccgtt ttgtcaggaa caccgcgcgc
    11641 ggatgtacca tttccatcag gacgcggagt atccgaaggg cgtgtaccgc gtgtgtacgg
    11701 cggcgacgta tcgttccggc tatcccgagt ggaaaatcct gttttcagtg gcggatttcg
    11761 acgaattgct cggcgacgat gtgtatttgg gcggcgtgtc acacttggtg gaacagccca
    11821 accgtgcgtt gttaacactg agcaaatcgg gcggcgatac ggcgtacacg ctggaagtgg
    11881 atttggaagc aggggaattg gtagaaggcg gttttcactt tccggcaggc aaaaaccatg
    11941 tgtcgtggcg cgatgaaaac agcgtgtggg tgtgtccggc ttgggacgaa cgccagttga
    12001 ccgaatcggg ctatccgcgt gaagtatggc tggtggaacg cggcaaaagt ttcgaggaaa
    12061 gcctgcctgt gtatcaaatt gctgaagacg gcatgatggt gaacgcgtgg cgttatctcg
    12121 atccgcaggg ttcgccgatt gatttgattg aagcgtcgga cggtttttac accaaaacct
    12181 atttgcaggt gtcggccgaa ggcgaggcga aaccgttaaa cctgcccaac gattgcgatg
    12241 tggccggcta tctggcgggg catcttttgc tgacgctgcg caaggactgg aaccgcgcga
    12301 accaaagcta tccgagcggt gcgctggtgg cggtgaagct gaatcggggt gaactcgggg
    12361 cggcgcagct tttgtttgcg cctgatgaaa cgcaggcatt ggaaagcgtg gaaacgacca
    12421 agcgttttgt ggtggcgagc ctgctggaaa acgtacgggg ccgtctgaaa gcgtggcggt
    12481 ttgccgacgg caaatggcag gaagtcgaac tgccgcgcct gccttcgggc gcgctggaaa
    12541 tgaccgacca gccgtggggc ggcgacgtgg tttaccttgc cgccggcgat ttcactacgc
    12601 cgctaacgtt atttgcgctg gatttgaacg tgatggaact gaccgttatg cgccgccagc
    12661 cgcagcagtt cgattcagac ggcatcaacg tgcaacagtt ttggacgact tcagccgacg
    12721 gcgagtgcat tccttatttc cacgtcggca aaaacgccac gcccgacacg ccgaccttgg
    12781 tttatgccta tggcggtttc ggcgtgcccg aattgccgca ttatctgggc agcatcggca
    12841 aatactggct tgaagaaggc aacgccttcg tgttggcgaa catacgcggc ggcggcgagt
    12901 tcggcccgcg ctggcatcag gcggcgcagg gaatcagcaa acacaaaagc gtcgatgatt
    12961 tgcttgccgt cgtgcgcgat ttgtccgaac gcggtatcag ttcgcccgaa cacatcggct
    13021 tgcagggcgg cagcaacggc ggactgatta ctgccgccgc cttcgtgcgc gaaccgcaaa
    13081 gcataggcgc gctggtgtgc gaagtgccgc tgaccgacat gatccgttat ccgctgctct
    13141 ccgccggttc aagctggaca gacgaatacg gcaatccgca aaaatacgaa gtctgcaaac
    13201 gccggttggg cgaattgtcg ccgtatcaca atctttcaga cggcatcgat tatccgcccg
    13261 cactcatcac caccagcctc agcgacgacc gcgtccatcc tgcccacgcg ctcaagttct
    13321 acgccaaact gcgtgaaacc tccgcgcaat cttggctcta ctctccggac ggcggcggcc
    13381 ataccggcaa cggcacccaa cgcgaatccg ccgacgaact cgcctgcgtg ttgctgtttt
    13441 tgaaagagtt tttgggctaa gggcggggag cggcactgcc gccgcgaatg aaaaaaggtc
    13501 gtctgaaact gctttttcag acgacctttt ttaatggttg tttcaaatca aaatatctat
    13561 gccgccggcc ccatcagcac ttcttcacat ccgaaggcaa aaatccgtaa tgccgtctga
    13621 acgcttcgtt gaaccgtccc gcgtggcggt agccgcaaaa gtgcatggcg gcttggacgg
    13681 tgctgccgga ttcgatgagg gcgagcgcgt gttccagccg caggcggcgc aggcatccgg
    13741 cgacggtttc gccggtttgc gctttgaaat agcgtttcag gtagcattcg ttcagtccga
    13801 cgcggcgggc gatttcggcg atggtcagcg gacgggcgaa ttcgtgttgc aggatgtcgg
    13861 cggcttcgtc tatgcgccgg cggcggtagc cgttgtcgtg gcggcggaag gtgaagcgca
    13921 ataatcgggc ggagagttcc agcgcggcgg cttcgtcggc aagcaggccg aagccgtccg
    13981 attcgaacga gcgttgcagc agtgggcagg ccgccgccgt cagtgccgct gcgttttgcg
    14041 ccagccgttg cagggcgaat cggcctatcg tttgcggcga aaacaggcgt tcgtccagca
    14101 agccttcgtc gtgccagcgg cgcagttttt ccagcgaaaa atccaaatgc agcgcgcaca
    14161 tgccgctgtt gtcgggcagc agggtttcgg atacgtccgc caactcgccg cgtaccagcc
    14221 agatttcgcc ggcagacggg cggtattccc tgccgcccat ttgtaaccgg ttctgccccg
    14281 acaccatgac gaacaaggcg cagttgtggc tgaaattgtg gatttcggtg ggaaacgcgc
    14341 ccgttccgcc gccgcgcatc cgcgacaagg tgatgcccga gtcgaagcgg ttgatgcaca
    14401 tttccagatg caaaccgggc tgttttgcct gcgcaatgag cgcgctgtcg gaacagccgt
    14461 ccaacgccca gccggattta tcggagcgga cataggtttg gtactggcgg tagatggcgg
    14521 cggtgttcat gattggatag gaacgagttg tctaacaaat gaattaaata ggaattatta
    14581 ccaataatca agcgcaggga ttggttgaaa cggaaaaggt cgtctgaaag ggtgtttcag
    14641 acgacctttt ccgtatcggg aatttgtttt gccgtatcgg gaattttgcg ttttgcggcg
    14701 tggtttctgc aggttgtttg cttaataata aacattctta ttcgtatgca aaggaaccgc
    14761 acaccgtgaa accgcgtttt tattgggcag cctgcgccgt cctgctgacc gcctgttcgc
    14821 ccgaacctgc cgccgaaaaa actgtatccg ccgcatccgc atctgccgcc acgctgaccg
    14881 tgccgaccgc gcggggcgat gccgttgtgc cgaagaatcc cgaacgcgtc gccgtgtacg
    14941 actgggcggc gttggatacg ctgaccgaat tgggcgtgaa tgtgggcgca accaccgcgc
    15001 cggtgcgcgt ggattatttg cagcctgcat ttgacaaggc ggcaacggtg gggacgctgt
    15061 tcgagcccga ttacgaagcc ctgcaccgct acaatcctca gcttgtcatt accggcgggc
    15121 cgggcgcgga agcatatgaa cagttggcga aaaacgcgac caccatagat ctgacggtgg
    15181 acaacggcaa tatccgcacc agcggcgaaa agcagatgga gaccttggcg cggattttcg
    15241 gcaaggaagc gcgcgcggcg gaattgaagg cgcagattga cgcgctgttc gcccaaacgc
    15301 gcgaagccgc caaaggcaaa ggacgcgggc tggtgctgtc ggttacgggc aacaaggtgt
    15361 ccgccttcgg cacgcagtcg cggttggcaa gttggataca cggcgacatc ggcctaccgc
    15421 ctgtagacga atctttacgc aacgaggggc acgggcagcc tgtttccttc gaatacatca
    15481 aagagaaaaa ccccgattgg attttcatca tcgaccgtac cgccgccatc gggcaggaag
    15541 ggccggcggc tgtcgaagta ttggataacg cgctggtacg cggcacgaac gcttggaagc
    15601 gcaagcaaat catcgtcatg cctgccgcga actacattgt cgcgggcggc gcgcggcagt
    15661 tgattcaggc ggcggagcag ttgaaggcgg cgtttgaaaa ggcagaaccc gttgcggcgg
    15721 ggaaagagta gggagtcgtc tgaaaacgga gcttccgaag gaagcggggg gtttctgcga
    15781 agctaaagtg cggtttcaac gaattgaaaa gcagcctgta tgttgaaaat accgctcaag
    15841 caaacctgcg gtttgccgcc ctctccctag ccctctccca cagggagagg ggattgggtt
    15901 gcaggctgcc tttaaggttt aggcaaattt ttaacttcgt tgaagctccg ttttcagacg
    15961 accttttgga gtaccgcagg cacacgcatc gaacggctga atcaaagttc agaccgatgg
    16021 cagcccgcac ccgagtttat gcggcaaaca gcgaggctac ggcaacccgc cccctctccc
    16081 tgtgggagag ggttagggag agggcagtaa gccgtaggct tacatcaaag tcgataacgc
    16141 tttcacaaag cctgtgtgca ctgaaaactg aaaggtcatc tgaaaacgga gctttcgaag
    16201 gaagcagagt ttctgcgaag ctaaaaccga agctgcaaaa aatcgaaaag cagcctgcac
    16261 gttgaaaatg ccgcccaagc aaacctgcgg tttgccgccc tctccctagc cctctcccac
    16321 agggagaggg gattgggatg caggctgtct ttaaggttca ggcaaatttt taacttcgtt
    16381 gaaactgcga tttcagaagc tccgttttag cttcgcagaa actccgcttc cttcgaaagc
    16441 tccgttttca gacgaccttt tggaacacca caggcacacg catcgaacgg ctgaatcaaa
    16501 gattcagacc gatggcagtc cgcacccgag tttatgcggc aaacagcgag gctacggcaa
    16561 cccgccccct ctccctgtgg gagagggtta gggagagggc ggtaagccgc aggcttacat
    16621 caaagccgat aacgctttcg ttacaactcc gcccactgaa cgaagccaaa acgacaaacc
    16681 gcatcgtaaa ccacccaacc cataggagaa ccccatgcaa aacgaaacca tcaacctgaa
    16741 acagcacctt gccgccatca aagaatactg gcagcccgaa atcatcaacc gccacgggtt
    16801 ccaattccgt ttggtcaaac ttttgggcga ttacggctgg catacgcacg gatacagcga
    16861 caaagtgctg tttgccgtgg agggcgacat ggcggtggac ttcgccgacg gcggcagcat
    16921 gacgatacgc gagggcgaga tggcggtcgt gccgaagtcg gtgtcgcacc gcccgcgttc
    16981 ggaaaacggc tgctcgttgg tgctgattga gttgtccgac ccgtccgagg ccgtctgaaa
    17041 acgaagtttc cgaaggaagc tgagtttctg cgaagctaaa agcagcctgc accttcaatc
    17101 aatatgccga aaatacaacc ccaccgcaca ccaacacaca aaggaaatcc catgacacgc
    17161 ttcaaatatt ccctgctgtt tgccgccctg ttgcccgtgt acgcgcaggc cgatgtttct
    17221 gtttcagacg accccaaacc gcaggaaagc actgaattgc cgaccatcac cgttaccgcc
    17281 gaccgcaccg cgagttccaa cgacggctac actgtttccg gcacgcacac cccgctcggg
    17341 ctgcccatga ccctgcgcga aatcccgcag agcgtcagcg tcatcacatc gcaacaaatg
    17401 cgcgaccaaa acatcaaaac gctcgaccgc gccctgttgc aggcgaccgg caccagccgc
    17461 cagatttacg gctccgaccg cgcgggctac aactacctgt tcgcgcgcgg cagccgcatc
    17521 gccaactacc aaatcaacgg catccccgtt gccgacgcgc tggccgatac gggcaatgcc
    17581 aacaccgccg cctatgagcg cgtagaagtc gtgcgcggcg tggcggggct gctggacggc
    17641 acgggcgagc cttccgccac cgtcaatctg gtgcgcaaac gcccgacccg caagccattg
    17701 tttgaagtcc gcgccgaagc gggcaaccgc aaacatttcg ggctgggcgc ggacgtatcg
    17761 ggcagcctga acaccgaagg cacgctgcgc ggccgcctgg tttccacctt cggacgcggc
    17821 gactcgtggc ggcagcgcga acgtagccgc gatgccgaac tctacggcat tttggaatac
    17881 gacatcgcac cgcaaacccg cgtccacgca ggcatggact accagcaggc gaaagaaacc
    17941 gccgacgcgc cgctcagcta cgccgtgtac gacagccaag gttatgccac cgccttcggc
    18001 ccgaaagaca accccgccac aaattgggcg aacagccgcc accgtgcgct caacctgttc
    18061 gccggcatcg aacaccgctt caaccaagac tggaaactca aagccgaata cgactacacc
    18121 cgcagccgct tccgccagcc ctacggcgta gcaggcgtgc tttccatcga ccacaacacc
    18181 gccgccaccg acctgattcc cggttattgg cacgccgacc cgcgcaccca cagcgccagc
    18241 gtgtcattga tcggcaaata ccgcctgttc ggccgcgaac acgatttaat cgcgggtatc
    18301 aacggttaca aatacgccag caacaaatac ggcgaacgca gcatcatccc caacgccatt
    18361 cccaacgcct acgaattttc ccgcacgggt gcctacccgc agcctgcatc gtttgcccaa
    18421 accatcccgc aatacggcac caggcggcaa atcggcggct atctcgccac ccgtttccgc
    18481 gccgccgaca acctttcgct gatactcggc ggcagataca gccgttaccg caccggcacc
    18541 gcacacaagg catgacctat gtgtccgcca accgtttcac cccctacaca ggcatcgtgt
    18601 tcgacctgac cggcaacctg tctctttacg gctcgtacag cagcctgttc gtcccgcaat
    18661 cgcaaaaaga cgaacacggc agctacctga aacccgtaac cggcaacaat ctggaagccg
    18721 gcatcaaagg cgaatggctt gaaggccgtc tgaacgcatc cgccgccgtg taccgcgccc
    18781 gtaaaaacaa cctcgccacc gcagcaggac gcgacccgag cggcaacacc tactaccgcg
    18841 ccgccaacca agccaaaacc cacggctggg aaatcgaagt cggcggccgc atcacgcccg
    18901 aatggcagat acaggcaggt tacagccaaa gcaaaacccg cgaccaagac ggcagccgcc
    18961 tgaaccccga cagcgtaccc gaacgcagct tcaaactctt cactgcctac cactttgccc
    19021 ccgaagcccc cagcggctgg accatcggcg caggcgtgcg ctggcagagc gaaacccaca
    19081 ccgaccctgc cacgctccgc atccccaacc ccgccgccaa agcccgcgcc gccgacaaca
    19141 gccgccaaaa agcctacgcc gtcgccgaca tcatggcgcg ttaccgcttc aatccgcgcg
    19201 ccgaactgtc gctgaacgtg gacaatctgt tcaacaaaca ctaccgcacc cagcccgacc
    19261 gccacagcta cggcgcactg cggacagtga acgcggcgtt tacctatcgg tttaaataag
    19321 gtcgtctgaa aacggagttt ctgcgaagct atagtggatt aacaaaaacc agtacgg
//
LOCUS       DAWGBY010000027        19323 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.027, whole genome shotgun sequence.
ACCESSION   DAWGBY010000027 DAWGBY010000000
VERSION     DAWGBY010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19323
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.027"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(191..391)
                     /locus_tag="WHG62_000831"
     CDS             complement(191..391)
                     /locus_tag="WHG62_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724966.1"
                     /translation="MPSEELSDGIFAFVRDIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVMPPLGFQTASYRTVKP"
     gene            complement(405..959)
                     /locus_tag="WHG62_000832"
     CDS             complement(405..959)
                     /locus_tag="WHG62_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724967.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            complement(1044..1544)
                     /locus_tag="WHG62_000833"
     CDS             complement(1044..1544)
                     /locus_tag="WHG62_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724968.1"
                     /translation="MNAMPQTAAQNETLHICSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            1948..3141
                     /locus_tag="WHG62_000834"
     CDS             1948..3141
                     /locus_tag="WHG62_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEZ1724969.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGIVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLGRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLDDEDTAEGLRRLEHVLTEFA
                     AANRP"
     gene            complement(3206..4450)
                     /gene="clpX"
                     /locus_tag="WHG62_000835"
     CDS             complement(3206..4450)
                     /gene="clpX"
                     /locus_tag="WHG62_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ1724970.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGKEPELVFES"
     gene            4641..5012
                     /gene="rbfA"
                     /locus_tag="WHG62_000836"
     CDS             4641..5012
                     /gene="rbfA"
                     /locus_tag="WHG62_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ1724971.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKIPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            5045..5968
                     /gene="truB"
                     /locus_tag="WHG62_000837"
     CDS             5045..5968
                     /gene="truB"
                     /locus_tag="WHG62_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ1724972.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFRAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIAAARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYAIDI
                     AEFDSPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLDETERDSLLLPCDVLVAHFPQTVLNDYAVHMLQCGQRPRFDEDLTSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAVSAA"
     gene            complement(6010..6120)
                     /locus_tag="WHG62_000838"
                     /pseudo
     CDS             complement(6010..6120)
                     /locus_tag="WHG62_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            6290..6730
                     /locus_tag="WHG62_000839"
     CDS             6290..6730
                     /locus_tag="WHG62_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724973.1"
                     /translation="MKTDIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNSQPANYTLN"
     gene            6964..8421
                     /locus_tag="WHG62_000840"
     CDS             6964..8421
                     /locus_tag="WHG62_000840"
                     /inference="COORDINATES: protein motif:HMM:NF013704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ1724974.1"
                     /translation="MIYIDPPYYFVKKKQQDSFGYNTNFKLSTWLTFMKNRLSIAKEL
                     LTDDGIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIMNLKGNNDEYAFAGTHEYT
                     LVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGFYKKGAPMRATGTEDKREDRPEMFYP
                     FLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEKYENLGYNFILPIADKQWGRW
                     RWGYSIKNKARLQTDIIVSQSKNGISLYKKQRPELDDLPTKKPKTIFYKPEYSSGNGT
                     EQMKNLFGEKAFKNPKPEELIQDFITITTNESDIVLDYHLGSGTTAAVAHKMNRQYIG
                     IEQMDYIETLAVERLKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACE
                     DSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLALDEQKQMVLEMLDLNQMY
                     VSLSEMDDEQFAGCLNDDDKALSRAFYQTEKKDGE"
     gene            8411..11149
                     /locus_tag="WHG62_000841"
     CDS             8411..11149
                     /locus_tag="WHG62_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ1724975.1"
                     /translation="MANNKMLFEVIENRKAVYLEDGDDEKCRLPEFVERNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIGSTHAKFLFTEKILQGDTVIPIRKVEMFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAPTKSKKRDAEIEHKGWEH
                     MVLELLLNKNGNPSENVLLEFTATPPEKADVQQKYADKIITKFGLKEFLQKGYTKEIN
                     LVSSTLSKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKTVDESKADYLAFLNW
                     VENVQVDDFSFLKTFSTSLNDSDNANEQGKTRTEQALKFMQDNKFGFAHLANWVKQNY
                     QKHNIIITNSENNKTKTEKTDSETEKLLNNLEAADNPIRAIFTVGRLTEGWDVLNLFD
                     IVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEGKQPNKRKFDNDMQH
                     ELRILEELFYYTHDEQSRYITELKNELRKDGYLPEKDDDKVLTTFKLKSEFADNKDFR
                     ELLIWANKKIPNPNAKSNNADSLKANPQTLSFQIHGNQLLQETQFTADKNDEKVKQLG
                     IQNNFSQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSKLNIQNRNELQNNLLKD
                     WQIEFLGLEQDKQVRPDDKLAGCLKILEMVEKHLNESDMPFIGTKEFTPKKLWEIFGT
                     PKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISARLGDLKSKYDVHLIRN
                     EEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDGWK
                     EEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTESFPLGAASLEKMK"
     gene            complement(11293..12465)
                     /locus_tag="WHG62_000842"
     CDS             complement(11293..12465)
                     /locus_tag="WHG62_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ1724976.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            12815..13261
                     /gene="iscR"
                     /locus_tag="WHG62_000843"
     CDS             12815..13261
                     /gene="iscR"
                     /locus_tag="WHG62_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ1724977.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            13290..14504
                     /locus_tag="WHG62_000844"
     CDS             13290..14504
                     /locus_tag="WHG62_000844"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ1724978.1"
                     /translation="MTVKTPIYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYVNGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            14768..15154
                     /gene="iscU"
                     /locus_tag="WHG62_000845"
     CDS             14768..15154
                     /gene="iscU"
                     /locus_tag="WHG62_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ1724979.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKGDDSVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            15241..15561
                     /gene="iscA"
                     /locus_tag="WHG62_000846"
     CDS             15241..15561
                     /gene="iscA"
                     /locus_tag="WHG62_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ1724980.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(15521..15742)
                     /locus_tag="WHG62_000847"
     CDS             complement(15521..15742)
                     /locus_tag="WHG62_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ1724981.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            15824..16324
                     /gene="hscB"
                     /locus_tag="WHG62_000848"
     CDS             15824..16324
                     /gene="hscB"
                     /locus_tag="WHG62_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ1724982.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            16422..19172
                     /gene="gyrA"
                     /locus_tag="WHG62_000849"
     CDS             16422..19172
                     /gene="gyrA"
                     /locus_tag="WHG62_000849"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ1724983.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
BASE COUNT         5403 a         4906 c         4510 g         4504 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta taaaaaccct tttccgcttt ggcaacgatt
       61 gaaaatttcc gtaaattcaa atatctagat tccttcctgc acgggaatga cacggaaggg
      121 tttcagatgc agggtgggca ttcctgccca ccaaatcccg cccttgcaac ggtgggcaag
      181 aatgctcgcc ctacggcttg actgttcgat atgatgccgt ctgaaaaccc aacggcggca
      241 tgacaatgcc gccctgccaa cgcacgtaaa tcagaattgc catcccgaca tcaaacgctt
      301 ggaaacaaaa tgccgtctga aaatcaaacg gcaacataac aatgtcccta acaaatgcaa
      361 aaatgccgtc tgaaagctct tcagacggca ttggtgcgcc gggtttaccg cctcctgccg
      421 aaaccgcgca tagcggggcg gcggtaattg gcgggcgggc gcgttgtcgg gcggtaacgc
      481 tgcgcctgcg ccgcctgttg ttttgcacgg aggctgcgcg tgttcaaatc cctgctggtg
      541 cgcgcattgg ggcgtgcgga ctgatggtag gctgcacgcg cgcgccgggc gacgggactg
      601 tcttggttgc ctgcccgtgt gaatttgttt gccagcgcgt tgccgataaa cgcgcctgcc
      661 gccgcgccga ccaggctttg cagcagccag cttcctgtcg attggtcgta aatatactgc
      721 tgcccgtctt taccggtaac gggttgcccg ttgttgccgt ttgcctgtgc ttcggcagga
      781 atggtgtctt tgactgcttc gggagtcagt tggtaaaccg tatcgtctgc ctgctgtgcg
      841 agctgctgtt gcagggcttc aatctgtttc tgctgctgtt cgagccgcgc ctgcgtgtcg
      901 tcttggcagg cggcgagtgc gaatgttgcg ataagcgcgg aggcgatgat ttttttcatg
      961 tgtgtcctgt ttgggtggaa aatcggtttt attgtatcgc cgtcgggaat tttggcaagc
     1021 attctgccga caaatcgtga tgtttacagg ggcagggtgt gcagtttgcg gacaaatgcg
     1081 aggctgttgg cgactgggtt gcctttgttt tcaacttcgt gttcggtttc tacggtcagc
     1141 aggcggcggt ttttgtgttt gttcaggctc aattcggctt gtgcgggtgt gaaaaacagg
     1201 cggtgttttt cggcaaagcg gcgggcgcgg ctgttggcgg ttttcaaaat ctgaagcagc
     1261 gatacgtcca gatggaagcg tcgcacgccc aatacgagaa tccgtgcggc aaaaaaatcg
     1321 gcggcatcgg taaactcggc ggggctgctg cggctgaagt cgtgccgttc ggcggctatc
     1381 agggcggcaa cagtgcggat ttgcggaatc atcgattcgc tgataagtgt gtcgtcccgc
     1441 cctgcatcga gaagcatggg ggaaaaatcc tgtgcatcat cgacaataat gctgcaaatg
     1501 tgcagggttt cgttttgtgc ggcggtttgg ggcattgcat tcatggtcat tttcctgatt
     1561 ctgtcgtgtg ttgccgaatc gggcgacctg tgtgaaggta acaaaaaagc cgccccgttt
     1621 tcgagcggcc tgttttgcgt atgggatgga tttcaagcaa gcgcaaaaaa gtaccgcacg
     1681 tctgtgtggt accaatagca ataagcggtt gtaaattttt tgccttgcat gatgaaatgc
     1741 cgtctgaaga taaaaatatt ggggagattc taaatcaaaa cgctgccgcg cctcaagcat
     1801 tttatcgaaa tttttttgat ttttcatcta tccgattgaa aatatttcgg tttattttta
     1861 ccgctgcccg atattgtcgg caatttccct ttatctgctt tgaaaaacgg tgcataatcc
     1921 cgagcaaaac cgcaatcagg agcaattatg caaaactatc tgacccccaa tttcgccttt
     1981 gccccgatga ttcccgaacg cgcttcaggc agccgcgttt gggatacgga agggcgtgaa
     2041 tatattgatt tttcaggcgg tatcgccgtc aatgcgctgg gacactgcca ccctgccctt
     2101 gtcgatgctt taaacgcgca gatgcacaag ctgtggcaca tttccaatat ctatacgacg
     2161 cgtccggcgc aggaattggc gcaaaaattg gttgcaaaca gttttgccga caaggttttt
     2221 ttctgcaact cgggcgcgga ggcgaatgag gcggcgttga agctggcaag gaaatatgcg
     2281 cgcgaccgtt tcggcggagg caaaagcgaa atcgtcgcct gtatcaacag tttccacggg
     2341 cgcacgctgt ttaccgtgtc cgtcggcggc cagccgaaat acagcaagga ttatgcaccg
     2401 ctgccgcaag gcattacgca cgttccgttc aacgatattg ccgcgctgga agctgccgtc
     2461 ggcgaacaga cctgcgcggt catcatcgag ccgatacagg gcgaaagcgg catcctgccc
     2521 gccactgcgg aatatttgca aaccgcgcgc cgtctgtgcg accggcacaa tgcgttgttg
     2581 attttggacg aagttcaaac cgggatgggg catacgggca ggctgtttgc ctatgaacat
     2641 tacggcattg ttcccgatat tttgagttcg gcaaaagcct tgggctgcgg ctttccgatc
     2701 ggcgcgatgc tggcgacaga aaagattgcc gccgccttcc aaccgggcac gcacggctcg
     2761 actttcggcg gcaacccgat ggcgtgtgcg gtcggcagcc gcgcattcga catcatcaat
     2821 acgcccgaaa ctttaaacca tgtccgtgaa caggggcaga aacttcagac ggcattgctg
     2881 gatttgggca ggaaaacagg cttgttctca caggttcgcg gcatgggact gctgctcggc
     2941 tgcgtgttgg acgaagccta tcgcggacgc gcatccgaaa tcaccgccgc cgccttgaaa
     3001 cacggcgtga tgattttggt tgcgggtgcg gacgtattgc gtttcgcgcc ttcgctgctg
     3061 ttggacgatg aggatacggc ggaaggtttg cggcgtttgg aacacgtgct gacggaattt
     3121 gccgccgcaa accgccccta ggcatcaaaa acaaaaaacc gcttcggaaa cgtggttcaa
     3181 cgttccgaag cggttttgtt tgccatcagg actcgaacac caattccggt tccttgccct
     3241 cttcgatgac tgccttaccg accaccactt ttttcaagcc ttgcaaatca ggcaggcggt
     3301 acatcgtatc gagcaggcag cgttcgacga tggaacgcag gccgcgcgcg ccggttttgc
     3361 gctccattgc ctgccacgca atggaacgca atgcgccttc ttcaaattcc aactcgacat
     3421 tttccatacc gaacaaggct tgatactgct tgaccaaagc gtttttcggc tcggtcaaaa
     3481 tattaatcag cgcgtcctca tccagttctt ctaacgttgc aatcacaggc aaacgtccga
     3541 ttaattccgg aatcagaccg aatttgatta aatcttccgg ttcgacgatg ccgaacagct
     3601 tggtaatgtc ggcattttcg tccttgctgt gaacggacgc accgaaaccg ataccgcctt
     3661 tttcagtacg ctggcggatg actttttcca agcctgcaaa cgcgccgccg cagataaaca
     3721 ggatgttggt ggtatcgacg ttgataaatt cctgattcgg atgcttgcgg ccgccttggg
     3781 gcggaacgct ggccaccgta ccttcaatca gtttcagcaa ggcttgttgc acgccttcgc
     3841 cggacacgtc acgcgtgatg gacggattgt cgcttttgcg tgaaatttta tcgatttcgt
     3901 cgatatagac gatgccgcgt tgggcttttt cgacatcgaa atcacatttg cccaacagtt
     3961 tggtaataat ctgttcgaca tcttcgccga cataacctgc ttcggtcagc gtggttgcat
     4021 ctgccatcac gaacggcaca tccagtttgc gcgccaaaga ttgcgccagc agggttttac
     4081 ccgatccggt cgggccgata agcaggatgt tggatttcga caattcgaca ttagctccgg
     4141 ctttcgggtg gcgcaggcgt ttgtaatggt tgtacaccga caccgccaag gctttcttgg
     4201 cttgttcctg accgataacg tggtcgttga ggttggcgac gatttcggcg ggcgtgggca
     4261 gcttgccgga ttcttccggc tcccctccgg cactttccga aggcgtgccg tcatttccgt
     4321 cttcatgcaa tatttcaata cagtttgaga cgcattcgtc acagataaag gcgttttcgc
     4381 cctcaattaa atgtttgacg tgtgatttgg attttccgca aaaggaacag gtacggtttt
     4441 cgttggacat ggctttcttt acaatgtatg cgttacagaa aacggcacgt gccgttcggg
     4501 ttgccaagta taataactat atccgttctt atcaatgtat taccttaaaa tcccgccgat
     4561 taggctataa tacgcccttt cgcaaccgcc ccggcggcaa aaatgccgtc tgaaaccaaa
     4621 tctgaaatct gaggatattc atgagaaaac cccaacgcgg ctatgcccgc caagaccgtg
     4681 tcaaagaaca aattatgcgc gagcttgccg aactcgtccg taccggactg aaagacccgc
     4741 gcgccggctt cattaccgtc aacgaagtcg aagttacccg cgattacagc cacgccaccg
     4801 tgttctacac cattttaaac caagacgcgc gcgaaattac ggaagaagtg ctggaacacg
     4861 cgcgcggaca cctccgcagc gaattggcca aacgcatcaa gctgttcaaa atccccgaac
     4921 tgcatttcaa atacgacgaa tccttggaac gcggtttgaa cctgtccgcc cttatcgacc
     4981 aagtagcggc ggaaaaaccg gttgaagact gacggatatg cccatgccgt ccgaacatcg
     5041 aaccatgaat acaggcaaac cccaaaaacg tgccgtcaac ggtgttttgc tcttggacaa
     5101 acccgaaggc ctttccagca acaccgcgct gcaaaaagcg cggcgtttgt tccgtgccga
     5161 aaaagccgga cataccggcg tgctcgaccc tttggcaacc gggcttttgc ccgtctgctt
     5221 cggcgaagcg accaagttcg cccaatacct gctggatgcc gacaaagcct acaccgccac
     5281 gctgaaactc ggcgaagcca gcagcacggg tgatgccgaa ggcgaaatca tcgctgccgc
     5341 acgcgccgat atttccttag ccgaatttca gacggcctgc caagccctga caggcaacat
     5401 ccgccaagtg ccgccgatgt tttccgccct caagcacgaa ggcaaaccgc tgtacgaata
     5461 cgcccgcaaa ggcatcgtca tcgaacgcaa gccgcgcgat attaccgttt acgccatcga
     5521 tattgccgag tttgactcac ccaaagccgt catcgacgtg cgttgcagca aaggcaccta
     5581 tatccgcacc ctcagcgaag acatcgccaa acacatcggc acgttcgccc acctgaccgc
     5641 cctgcgccgc accgaaaccg ccggctttac catcgcccaa agccacacgc tcgaagcctt
     5701 ggcaaacttg gacgaaacag aacgcgacag cctgctgctg ccctgcgacg tattggttgc
     5761 ccattttccc caaaccgttt taaacgatta tgccgtccat atgctccaat gcgggcaacg
     5821 gccgcgtttc gatgaagacc tgacttccga tacgccggta cgcgtttaca cggaaaacgg
     5881 ccgctttgtc ggcctggcgg aatatcaaaa agaaatatgc cgtctgaaag ccttgcgcct
     5941 gatgaacacg gcggtatctg ccgcctgaac ggcggttaaa aatacgggct gtgtttgaat
     6001 aatgtgttga tatagtggat taaatttaaa ccagtacggc gttgcctcgc cttgccgtac
     6061 tatttgtact gtctgcggct tcgtcgcctt gtcctgattt aaatttaatc cactatattt
     6121 ccgcaaaatt ccgacacact cggacacccg ccccgcttat cgcaactttg cgaacgcccc
     6181 cggaaacagc aaagacatca aaggattgat tttattagaa tttatttgca aagccatttg
     6241 ccgttacaca agaatggcac attaaaatga ctgatgagga tttataacga tgaagacaga
     6301 cattcaaacc gaattaaccc aagccctgct atcacacgaa aaagtatggg cgaacgaaga
     6361 aaaaaccatt ttagccaaaa acattctgtt ggatttggtg gaaaaaaccg acccgaccat
     6421 tatcggtttg ttattgaata atgatgagtt aaaacgccat ttctttgtgg aagtgaatgg
     6481 tgttttggtg tttaaattgc aggatttacg ttttttcttg gacaaacaca gcgtcaataa
     6541 ttcctacaca aaatacgcca accgcattgg tttgacggac ggcaaccgct ttttgaaaga
     6601 caattcggat attgtgttgg attttccgtt taaagattgc gtattgaatg gcggacaaag
     6661 caccgaagaa ggcgaagaga tttattttaa acgcagtaat agccagccag ccaattatac
     6721 actaaattaa cccgaaaaag acaagaaatc ttttttaatc aaacgcttgc ttttgatgaa
     6781 atcgatcggc tttttgacgc aaaagcattc tcaaaattct ctcgctatac cgcagacggc
     6841 aaacaagcgg ttggcgaaat caaacgtcat tcagacggca cacccgccga aaatctcatt
     6901 atcaaaggca ataatctgat agccctacat tcgcttgcca aacagtttaa aggcaaagtg
     6961 aagttgattt atattgatcc gccttattat tttgttaaaa agaaacaaca agatagtttt
     7021 ggttataaca ctaactttaa attatctact tggcttacat ttatgaaaaa tcgtttatca
     7081 attgccaaag aattattaac tgatgatggg attattgtta tttccattga tgatgacgga
     7141 aatgcttatt taaagatttt gttagatgaa atttttggat ttgaaaattt tatcggaaat
     7201 ttacccacta ttatgaattt aaaaggtaat aatgatgaat atgcttttgc aggcactcac
     7261 gaatacacac tagtctttgc taaaaataaa gataaatcta ctttttatga atttccaata
     7321 gatgaagata attttttaga gaaatgggaa gaagatgaaa ttgggtttta taaaaaagga
     7381 gctccaatgc gagcaacagg aaccgaagat aaaagagaag atagacctga aatgttctat
     7441 ccttttttgg taaaaaataa cacagttagt acaattacag atgaagaatt ttctcaaatc
     7501 tataataaag atttagaagt attcaatgat gattttattc aaaaactaaa agagaaatac
     7561 gaaaatcttg gatacaattt tattttacct attgctgata aacaatgggg gcgttggcgt
     7621 tgggggtatt caataaagaa taaggcaagg ctgcagacgg atattattgt tagccaatct
     7681 aaaaatggaa tttccttgta taaaaaacaa agacctgaat tagatgattt acctacaaaa
     7741 aaacctaaaa ctatttttta taaacctgaa tacagtagtg gtaatggaac tgaacagatg
     7801 aaaaatcttt ttggtgaaaa ggcatttaaa aatcctaaac cagaagaact tatccaagat
     7861 tttattacca tcacaaccaa cgaatccgac atcgtcttag actaccatct tggtagtggc
     7921 acaaccgccg ccgttgccca caaaatgaac cgacaatata tcggtattga acaaatggat
     7981 tatattgaaa cgcttgccgt tgaacgcttg aaaaaagtga ttgatggcga gcaaggcggt
     8041 atttccaaag ccgtgaattg gcaaggtggt ggcgagtttg tttatgccga acttgcccca
     8101 tttaacgaaa ccgcaaaaca acaaattttg gcttgcgaag attcagacgg catcaaaacg
     8161 ctgtttgaag gtttatgcga acgctatttc ttgaaataca acgtcagcgt aaatgaattt
     8221 agtcaaatca ttcaagagcc tgaatttcaa tccttggcat tagacgaaca aaaacaaatg
     8281 gtgcttgaaa tgttggattt aaatcaaatg tatgtttcat tatccgaaat ggatgatgag
     8341 caatttgcag gttgcttaaa tgatgacgat aaagcgttaa gccgtgcgtt ctatcaaacg
     8401 gagaaaaaag atggcgaata ataaaatgtt gtttgaagtg attgaaaacc gcaaagctgt
     8461 gtatttggaa gacggcgatg atgaaaaatg caggctgcct gaatttgtag aacgcaattt
     8521 aaaatatccg ttttttgaat ggcaaaaatc ggctttagaa aactttgtga tttttgaccg
     8581 cacttcaaaa ttaaaggatt ttcccgatat caaaaaccgc cctacccatt tgctgttcaa
     8641 tatggcaaca ggtgcaggca aaacgatgat gatggcggcg ttgattttgt attattttga
     8701 aaagggttat cggcattttc tgtttttcgt caatcaaaac aatatcgtag ataaaacgga
     8761 aaataatttt attggctcaa cgcacgcaaa atttttattt accgagaaga ttttgcaagg
     8821 tgatacggta attcctattc gcaaagtgga aatgtttagc ccacattcag acggcattga
     8881 aattaaattt accagcattc aaaaactata taacgatatt cacaccgaac gggaaaacca
     8941 aaccacattg gcggatttgc ataaattgaa ccttgtgatg ctgggcgatg aagcgcacca
     9001 tttaaacgcc ccaactaaaa gcaaaaaacg cgatgccgaa attgaacaca aaggctggga
     9061 gcatatggtt ttggaattgt tactcaataa aaatggcaat cccagcgaaa atgtgctgtt
     9121 ggaatttacc gccacgccac ctgaaaaagc tgacgtgcaa caaaaatacg ctgataaaat
     9181 catcacaaaa tttggtttaa aagaattttt gcaaaaaggt tataccaaag aaatcaattt
     9241 ggtatccagt acactgagca agaaagagcg ggtgttgcac gctttattgt ttgcttggta
     9301 tcgccatcaa atcgctttga aatatggcat tgccaatttc aaacctgtga tgttgtttag
     9361 aagtaagacg gttgatgaat caaaagcgga ttatttggca tttttaaatt gggtagaaaa
     9421 tgtgcaagta gatgattttt cgtttttaaa gacattttca acaagtttaa acgatagcga
     9481 taacgccaac gaacaaggca aaacccgcac cgaacaagcc ctaaaattta tgcaggacaa
     9541 taaatttggg tttgcacatt tagcaaattg ggtaaaacaa aattatcaaa aacacaatat
     9601 cattattacc aactccgaaa acaacaaaac caaaaccgaa aaaaccgaca gcgaaacgga
     9661 aaaattgcta aacaatctgg aagcggctga taatccaatc cgtgccattt ttacggtggg
     9721 tagattaacc gaaggttggg acgttttaaa tttgtttgat attgtgcgtt tgtatgaagg
     9781 gcaaaacggc ggcggttcaa ataaaaaatc aggcaaaacg gctgccgcca ccgtatcgga
     9841 aaagcagttg atcggtcgcg gcgtgcgtta ttttccattt gcgtttgaag gtaaacagcc
     9901 gaataaacgc aaatttgaca acgatatgca acacgaattg cgtattttgg aagaattgtt
     9961 ttattacacg cacgatgagc aatcccgcta tattacagaa ctgaaaaacg agttacgaaa
    10021 agacggttat ttgcctgaaa aagacgatga taaggtattg acaacattta aactcaaatc
    10081 tgaatttgcc gataataagg attttagaga gttgttaatt tgggcgaata aaaaaatccc
    10141 caacccaaac gccaaaagca ataatgcaga cagcctaaaa gccaatccgc aaacactttc
    10201 attccaaatt cacggcaatc aactgttgca ggaaacgcaa tttacagccg ataaaaatga
    10261 tgaaaaggtc aagcaacttg gcatacaaaa taatttttct caaaccataa aaatgagtga
    10321 aatggaacgg cacatcttca ataaagcatt acatatcaaa gggaaaaata gtcaatcttt
    10381 attccatttc aaccgtttgc aaagcaaact caacattcaa aatcgcaatg aattgcaaaa
    10441 taacttgttg aaagactggc aaattgaatt tttaggatta gagcaagata aacaggttcg
    10501 cccggatgat aaacttgcag gctgcctgaa aatcttggaa atggttgaaa aacatctgaa
    10561 tgaaagtgat atgccgttta tcggtacaaa agaatttaca cctaaaaaat tatgggaaat
    10621 tttcggcacg ccaaaacaaa aatgggtcaa aaaagatgat gtaaaaacga ctattgccac
    10681 gcaaaatgat tggtatgtga tgaataattt tgccggaacg ggtttggaag aagcgttaat
    10741 tcaatttatt tcagcgcgtt tgggcgattt gaaatctaaa tatgacgttc atttaatccg
    10801 taatgaagaa gtgtttaaat tgaataactt tgccgatggt gaaggattta tgccggactt
    10861 tattttattg ctgaaagata aacaaaaatc ttcttccaat ggtgtgaacg actttttgca
    10921 ttaccaaatt ttcattgagc ccaaaggtga gcatttagtg gaaactgatg gatggaaaga
    10981 agaattttta gaagccatca ctgtggaata tgggatggat aagatcctgc aaaaagatac
    11041 accgcattat cgtttgatcg gtttaccgtt ttttactgat catcagaaaa atggacaatt
    11101 tacggagtca ttccctttag gtgcggcatc gcttgaaaaa atgaagtagt gcattgcagg
    11161 caaccccgtt tgacaaaact tcctttacaa aagggcgttt tgtcagatat ttaatcaaca
    11221 cattattaaa atacagccaa attttaatgc cgtccgaacc ctgtgttcag acggcatcgt
    11281 atttttcagt atctaaaccg tttccctgcc ccaatctttg cctctcaaaa tcgaagcatc
    11341 gacatcttga atatcgcggt gtcccgtaaa cgccatagat atatccattt ctttatacag
    11401 gatttccagc gcacgggtta cgccttcttc accatacgca cccaaaccat acagaaacgc
    11461 ccggcctatc atcgtacctt tcgcgcccaa agcccacgcc ttcaaaatat cctgaccgct
    11521 gcggataccg ctgtccatcc aaacttcgat gtcgctgccc actgcgctga cgatgtcggg
    11581 caaggctttg atggcagaca cggtatcgtc gagctgtcgg ccgccgtggt tggaaacaat
    11641 caatgcgtcc gcgccgcttt tcgctgcttt ttccgcgtct tcgggttcca taatgccttt
    11701 gataatcagc ttgccgcccc acaaatcttt aatacgcgcc acatcgtccc agctcaggcg
    11761 cgggtcgaat tgttcggaag tccatgaaga cagcgaagac aaatcgccga cgttcttcgc
    11821 gtgtccgacg atattgcgga acgtgcggcg ttccgtgttc agcattttca tgcaccattc
    11881 cggtttggtc gctagattga ttaaattggc gatggtcggt ttcggcggcg cggacaggcc
    11941 gtttttgatg tctttgtggc gttgccccaa aacctgcaaa tcggcggtca aaaccaatgc
    12001 cgaacatttg gcatccttcg cgcgcttaat caggttttcc ataaattcgc ggtcgcgcat
    12061 cacataaagc tgaaaccaaa acggcgcgct ggtgttctcg gcaacgtctt caatcgagca
    12121 gatggacatg gtggacaacg taaacggaat accgaacttc tccgccgccc gcgccgccaa
    12181 aatttcgccg tctgcgtgtg ccatgccggt aaaacccgtc ggcgcaatcg ccaccggcat
    12241 tttcacatcc tgcccgatca ttttagtctc aaggctgcgt ccctccatat tgaccaatac
    12301 tttttgacgg aagcggatgt ctttgaaatc cgaagtattt tcccgataag tcgtttccgt
    12361 ccacgaaccc gaatcgatgt aatcgtaaaa catacgcggc attttgcgct tggcaacgcg
    12421 gcgcaagtct tcgatgcagg tcattttgct caaatcacgt ttcatcttgt ttttccctgt
    12481 ttgacagcct gatggaatat gccgtccgaa accgcttgag ccttcagaca gcatttcagg
    12541 caatacccaa ataaatcact aagatttaga taatctatat caatatcaaa aataaatcaa
    12601 atcgttttga aaccgcttgc cggcaaaata ccccgaccgc cgctcctcaa aaaacataac
    12661 caactgattt aaaaaaccaa acaaataaag caaaatcaga ctataccgcc atttaaacaa
    12721 acaatcggca acagctcccc cttacttgac tgaaacactc agatattgga caattctccc
    12781 cactataaaa aagccgacac gggcaaccac caccatgaga ctgaccacca aagggcgttt
    12841 cgccgttacc gctatgctgg atttggcgat gaacgcgcaa accggcgccg tcaaactcag
    12901 tgccatcagc gaacgccaaa acatatccct ctcctatctc gagcaattgt tcggcaaact
    12961 ccgccgcgcc ggactggttg aaagcctgcg cgggcccggc ggcggctaca tcctcgccgc
    13021 accggcggca cgcatcaaca tcgcccaaat catcgccgcc gccgaagacc ggctggacgc
    13081 aacccaatgc ggcagcaaag ccaactgcca ccacggcgcg ccctgcctga cgcacgatct
    13141 ttgggagaat ttaaacaaaa ccatcaacga ctacctcggc agcgttaccc tgcaaagcat
    13201 catcgaacag aaaaacaacg gcgacggcag ccgcgtcgtc caatttacac acatccatta
    13261 aataacaccc gaaaaagaaa gagcaaacca tgaccgtcaa aacccccatt tacctcgact
    13321 acgccgccac cacccccgtt gacaaacgcg ttgccgaaaa aatgattccc tatctgaccg
    13381 aaaccttcgg caacccagcc tccaacagcc acagcttcgg ctgggaagca gaagaagctg
    13441 tagaaaaagc acgtgcagac attgccgccc tgattaacgc cgactctaaa gaaatcgttt
    13501 tcaccagcgg cgcaaccgag tccaacaacc tcgctatcaa aggcgcggcg cacttctaca
    13561 aatctaaagg taatcacctc atcactgtaa aaaccgaaca caaagccgta ctcgacacca
    13621 tgcgcgaact cgaacgccaa ggttacgaag taacttatct ggacgtacaa gaaaacggtt
    13681 tggttgattt agacgtactg aaagccgcca tccgcgaaga caccatcctc gtttccgtaa
    13741 tgtgggtaaa caacgaaatc ggcgtggttc aagatattcc tgccatcggc gaaatctgcc
    13801 gcgaacgcaa aatcattttc cacgttgacg cagcacaagc atgcggcaaa gtgcctgtcg
    13861 atgtcgaagc cgccaaaatc gacctgctct cgatgtccgc gcacaaagtg tacggcccca
    13921 aaggcatcgg cgcgctgtac gtccgccgca aaccccgcgt ccgcctcgaa gcccaaatgc
    13981 acggcggcgg ccacgaacgc ggcttccgca gcggcacatt gccgacccac caaatcgtcg
    14041 gtatgggcga agccttccgc atcgccaaag aagaactcga acaagatatg gcgcactacc
    14101 gcaaactgcg cgacatcttc ctcaaaggca tcgaaggcat cgaagaagtc tatgtcaacg
    14161 gcgacctcga acaccgcgcc ccgaacaacc tgaacgtcag cttcaacttc gtcgaaggcg
    14221 aaagcctgat tatggcggtg aaagaactcg ccgtatccag cggctccgcc tgtacttctg
    14281 ccagtctcga acccagctac gtcctgcgcg cgctcggccg caacgatgaa ctggcgcact
    14341 catccctgcg catcaccttc ggtcgcatga ccaccgaaga agaagtgcaa ttcgccgccg
    14401 aactgattaa atccaaaatc ggcaaactgc gcgaactgtc gccgctgtgg gaaatgttca
    14461 aagacgggat tgatttgaac tcgattgaat gggcagcgca ttaaagcgta ccaacatgcc
    14521 gtccgaacct ttagacggca ttccaaaaac aaagcaatca agagaaaata tgaacgaaca
    14581 agatttagat ttggacaatc tcgacaacct gcttgaagat tttgacggcg ttaccgtgga
    14641 aggcggcgtc gattcggaaa acgacgacgg ctgcgaaggc ggggcgtgca aaatctaaac
    14701 ttcaggccgt ctgaaaatcg gcaaacaaac cacttaaacc atcaaaaaac attaaggaaa
    14761 ccacatcatg gcatacagcg ataaagtaat cgaccactat gaaaatccgc gcaacgtcgg
    14821 cacattcgac aagggagacg attccgtcgg caccggcatg gtcggcgcgc ccgcctgcgg
    14881 cgacgtcatg cgcctgcaaa tcaaagtgaa cgacgagggc atcatcgaag atgcgaaatt
    14941 taaaacttac ggctgcggct cggccatcgc ttcgtccagc ctgattaccg agtgggttaa
    15001 aggcaaaagc ctggatgacg cgctggcaat caaaaacagc gaaatcgccg aggagttgga
    15061 attgccgccg gtaaaaatcc actgctccat cttggctgaa gatgcggtaa aagcggccgt
    15121 tgccgactac cgcaaacgtc aggaaaacag ataaagccct tcagacggca tcatcccgca
    15181 atgccgtccg aaccacccgc cgcttcaggt ccgtccgggg cggtacaaca aggaagaaat
    15241 atgattaccc ttaccgagaa tgccgcaaaa cacatcaatg actatctcgc caaacgcggc
    15301 aaaggcttgg gcgtacgctt gggtgtgaaa accagcggct gctcggggat ggcgtacaac
    15361 cttgaatttg tcgacgaagc cgatggcgac gacctgattt tcgaaggaca cggcgcgcgc
    15421 atttatatcg atccgaaaag cctggtttat ctggatggca cgcaagtcga ttacaccaaa
    15481 gaaggtttgc aggaaggttt caaatttgaa aaccccaatg tcaaagactc ctgcggctgc
    15541 ggcgaaagct tccacgttta aggcataaaa acggcgggac cgtatcaaaa ccgtcccgcc
    15601 attttttcgc ttcctgcctg ttgtagctgc ctttgccttt ccttttccgt tccaccttgt
    15661 gccggaacaa atcggatttc actaaggctt ttaaagcatt gtcgcgtatt ttgcctttat
    15721 tgtgctgcac tttgccgccc atattcagtc ctttcgttta agaagcggca gattataagg
    15781 caaaaacagt tttctgccaa aatcttacat ttatcatcct actatgtccc aatatttcac
    15841 cctcttccgg attgaacccg ctttcgatat cgacaccgaa aacttggaac aaacctaccg
    15901 cgccttggcc gcccgtttcc atcccgataa attcgcttca gcttccgcct ttgagcaaaa
    15961 gcaggcagtg atgatgtctt ccaccatcaa cgatgcctac cgcaccttga aaaaccccat
    16021 cgaccgcgcc gcctacctgc tgaaaacatc gggcatcgat gccgacgcgc cggagcatac
    16081 cgctttcgcc cccgaattcc ttatgcagca aatggaatgg cgcgaaacgc tgatggaggc
    16141 acgggcaggc aacgaccttg aatccttgaa aaatctcgac aacgaaatcc gcgacgaaca
    16201 agaaaaactg ttctgcggtc tgaaacagtc gtttgcccga caagattacg acacagccgc
    16261 acaacaagtc cgccaaggca ggtttctcga caaactccgc aacgaaattt cctcggcatt
    16321 ataatccgca ccgtgtttca gacggcgtaa ccgccgcacc gttccgcgtc aaaatatgct
    16381 aaaataagca acaatttttt gccatacgaa acattgaaac catgaccgac gcaaccatcc
    16441 gccacgacca caaattcgcc ctcgaaaccc tgccggtaag ccttgaagac gaaatgcgca
    16501 aaagctatct cgactacgcc atgagcgtca ttgtcgggcg cgcgctgccg gacgttcgcg
    16561 acggtctcaa gccggtacac cgccgcgtac tgtacgcgat gcacgagctg aaaaacaact
    16621 ggaatgccgc ctacaaaaaa tcggcgcgca ttgtcggcga cgtcatcggt aaataccacc
    16681 cccacggcga taccgccgta tacgacacca tcgtccgtat ggcgcaaaat ttcgctatgc
    16741 gttatgtgct gatagacgga cagggcaact tcggatcggt ggacgggctt gccgccgcag
    16801 ccatgcgcta caccgaaatc cgcatggcga aaatttccca cgaaatgctg gcagacattg
    16861 aggaagaaac cgtcaatttc ggcccgaact acgacggtag cgaacacgag ccgcttgtac
    16921 tgccgacccg tttccccaca ctgctcgtca acggctcgtc cggcatcgcc gtcggcatgg
    16981 cgaccaatat cccgccgcac aacctttctg ataccgtcaa tgcctgcctg cgcctgctcg
    17041 atgcacccga caccgaaatc gacgaactga tcgacattat ccaagccccc gacttcccga
    17101 ccggggcaac catctacggc ttgagcggcg tgcgcgaagg ctataaaaca ggccgcggcc
    17161 gcgtcgttat gcgcggtaag acccatatcg aacccatagg cagaaacggc gaacgcgaag
    17221 ccatcgttat cgacgaaatc ccctatcagg tcaacaaagc caagctggtc gagaaaatcg
    17281 gcgatttggt tcgggaaaaa acactggaag gcatttccga gctccgcgac gaatccgaca
    17341 aatccggtat gcgcgtcgtt atcgagctga aacgcaacga aaatgccgaa gtcgtcttaa
    17401 accaactcta caaactgact ccgctgcaag acagtttcgg catcaatatg gtggttttgg
    17461 tcgacggaca accgcgcctg ttgaacctga aacagattct ctccgaattc ctgcgccacc
    17521 gccgcgaagt cgttacccga cgtacgcttt tccggctgaa gaaggcacgc catgaagggc
    17581 atatcgccga aggcaaagcg gtcgcactgt ccaatatcga tgaaatcatc aagctcatca
    17641 aagaatcgcc caacgcagcc gaggccaaag acaaactgct tgcgcgtcct tggcgcagca
    17701 gcctcgttga agaaatgctg acgcgttccg gtctggattt ggaaatgatg cgtccggaag
    17761 gattggctgc aaacatcggc ttgaaagagc aaggttatta cctgagcgag attcaggcag
    17821 atgctatttt acgcatgagc ctgcgaaacc tgaccggcct cgatcaagaa gaaattgtcg
    17881 aaagctacaa aaacctgatg ggtaaaatca tcgactttgt ggatatcctc tccaaacccg
    17941 aacgcattac ccaaatcatc cgcgacgaac tggaagaaat caaaaccaac tatggcgacg
    18001 aacgccgcag cgaaatcaac ccgttcggcg gcgacattgc cgatgaagac ctgattccgc
    18061 aacgcgaaat ggtcgttacc ctgacacatg gcggctatat caaaacccag ccgaccaccg
    18121 actatcaggc gcagcgtcgc ggcgggcgcg gcaaacaggc ggctgccacc aaagacgaag
    18181 actttatcga aaccctgttt gttgccaaca cgcatgatta tttgatgtgc tttaccaatt
    18241 tgggcaagtg tcattggatt aaggtttaca aactgcccga aggcggacgc aacagccgcg
    18301 gccgtccgat taacaacgtc atccagttgg aagaaggcga aaaagtcagc gcgattctgg
    18361 cagtacgcga gttccccgaa gaccaatacg tcttcttcgc caccgcgcag ggaatggtga
    18421 aaaaagtcca actttccgcc tttaaaaacg tccgcgccca aggcattaaa gccatcgcgc
    18481 tcaaagaagg cgactacctc gtcggcgctg cgcaaacagg cggtgcggac gacatcatgc
    18541 tgttctccaa cttaggtaaa gccatccgct tcaacgaata ctgggaaaaa tccggcaacg
    18601 acgaagcgga agatgccgac atcgaaaccg aaatttcaga cggcatcgaa gatgaaaccg
    18661 ccgacagcga aaacgcactg ccgagcggca aacacggtgt tcgcccgtcc ggtcgcggca
    18721 gcggcggttt gcgcggtatg cgcctgcctg ccgacggcaa aatcgtcagc ctgattacct
    18781 tcgcccctga aaccgaagaa agcggtttgc aagttttaac cgccaccgcc aacggatacg
    18841 gaaaacgcac cccgattgcc gattacagcc gcaaaaacaa aggcgggcaa ggcaatattg
    18901 ccattaacac cggcgagcga aacggcgatt tggtcgccgc aaccttggtc ggcgaaaccg
    18961 acgatttgat gctgattacc agcggcggcg tacttatccg caccaaagtc gaacaaatcc
    19021 gcgaaaccgg ccgcgccgca gcaggcgtga aactgattaa cttggacgaa ggcgaaacct
    19081 tggtatcgct ggaacgtgtt gccgaagacg aatccgaact ctccgacgct tctgtaattt
    19141 ccaatgtaac cgaaccggaa gtcgagaact gaaaatcatc tcccgatgcc gtctgaagat
    19201 tcagacggca tttattttat ccctcatccg tcatccagct tctcacaata tagcggatta
    19261 tagtcaatta aaaacaaggg gctgtcctag ataactaggg aaattcaaat taagttagag
    19321 ttg
//
LOCUS       DAWGBY010000028        19215 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.028, whole genome shotgun sequence.
ACCESSION   DAWGBY010000028 DAWGBY010000000
VERSION     DAWGBY010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19215
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.028"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(152..1927)
                     /gene="ptsP"
                     /locus_tag="WHG62_000850"
     CDS             complement(152..1927)
                     /gene="ptsP"
                     /locus_tag="WHG62_000850"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ1724984.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRGLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTARRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPSVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRILLGMGLRRFSMNPNNILPVKNIILHSNIAQLENEIAKIVRCEDE
                     EKAEKLIKQMNSVSVEEEADFKGRK"
     gene            complement(1927..2196)
                     /locus_tag="WHG62_000851"
     CDS             complement(1927..2196)
                     /locus_tag="WHG62_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ1724985.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            complement(2265..2702)
                     /locus_tag="WHG62_000852"
     CDS             complement(2265..2702)
                     /locus_tag="WHG62_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ1724986.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            complement(2783..3346)
                     /locus_tag="WHG62_000853"
     CDS             complement(2783..3346)
                     /locus_tag="WHG62_000853"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ1724987.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            complement(3415..4239)
                     /locus_tag="WHG62_000854"
     CDS             complement(3415..4239)
                     /locus_tag="WHG62_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ1724988.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQEIAGWAMS
                     EKLDGVRAYWDGKHLVSRQGYVFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     ASSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRYYEGKGRNAGRLGA
                     VGCKNRYGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTQKGTPKFATFVRVRTDR"
     gene            4331..4963
                     /locus_tag="WHG62_000855"
     CDS             4331..4963
                     /locus_tag="WHG62_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ1724989.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHIVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFTLPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            complement(5169..6953)
                     /gene="rmuC"
                     /locus_tag="WHG62_000856"
     CDS             complement(5169..6953)
                     /gene="rmuC"
                     /locus_tag="WHG62_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ1724990.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQHDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTERANETTALSESLEYVAEDEAV"
     gene            complement(7292..8080)
                     /locus_tag="WHG62_000857"
     CDS             complement(7292..8080)
                     /locus_tag="WHG62_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ1724991.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            complement(8095..9444)
                     /locus_tag="WHG62_000858"
     CDS             complement(8095..9444)
                     /locus_tag="WHG62_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ1724992.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            complement(9463..10044)
                     /gene="petA"
                     /locus_tag="WHG62_000859"
     CDS             complement(9463..10044)
                     /gene="petA"
                     /locus_tag="WHG62_000859"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ1724993.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            complement(10167..10916)
                     /locus_tag="WHG62_000860"
     CDS             complement(10167..10916)
                     /locus_tag="WHG62_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ1724994.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYSPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            11047..11976
                     /locus_tag="WHG62_000861"
     CDS             11047..11976
                     /locus_tag="WHG62_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ1724995.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAEWDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            complement(12231..12623)
                     /gene="rpsI"
                     /locus_tag="WHG62_000862"
     CDS             complement(12231..12623)
                     /gene="rpsI"
                     /locus_tag="WHG62_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ1724996.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(12633..13064)
                     /gene="rplM"
                     /locus_tag="WHG62_000863"
     CDS             complement(12633..13064)
                     /gene="rplM"
                     /locus_tag="WHG62_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ1724997.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(13242..13421)
                     /gene="ssrS"
                     /locus_tag="WHG62_000864"
     ncRNA           complement(13242..13421)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WHG62_000864"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(13427..13732)
                     /locus_tag="WHG62_000865"
     CDS             complement(13427..13732)
                     /locus_tag="WHG62_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ1724998.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(13743..14072)
                     /locus_tag="WHG62_000866"
     CDS             complement(13743..14072)
                     /locus_tag="WHG62_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1724999.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QRQETQQ"
     gene            complement(14127..15116)
                     /locus_tag="WHG62_000867"
     CDS             complement(14127..15116)
                     /locus_tag="WHG62_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ1725000.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(15239..17941)
                     /gene="ppc"
                     /locus_tag="WHG62_000868"
     CDS             complement(15239..17941)
                     /gene="ppc"
                     /locus_tag="WHG62_000868"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ1725001.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLNFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAVLLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEAGILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPDKAKVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            17984..18877
                     /locus_tag="WHG62_000869"
     CDS             17984..18877
                     /locus_tag="WHG62_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ1725002.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQATEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
BASE COUNT         4112 a         5230 c         5100 g         4773 t
ORIGIN      
        1 gggaatgacg gattttaggt ttctgatttc ggttttctgt tttaagggaa tgaccgattt
       61 tgggtttctg tttcggtttt ctattttgca agaatggcaa aatttcagat tgcgggcatt
      121 gttaagtatt tctatttttt acctgccgta tttatttccg ccccttgaag tcggcttctt
      181 cctcgacaga cacgctgttc atctgtttga tcagcttttc cgccttttcc tcgtcctcgc
      241 agcggacgat tttggcaatc tcgttttcga gctgtgcgat attgctgtgc aggatgatgt
      301 ttttgacggg caggatgttg ttcggattca tggaaaaacg gcgcagcccc ataccaagca
      361 ggatgcgggt aaacgccgta tcgcccgcca tctcgccgca tacggatacg tctttgtcca
      421 tgcggttggc ggtacggatg acgtgttgca gcattttcaa cacggaagga tgtccgggct
      481 ggtagagatg gctgacgctg tcgtcgccgc gatcgacgga caagatgtat tgaatcaggt
      541 cgttggtacc gacggagatg aaatcgacca gtttcaaaat actgccgacg gtcagcgcgg
      601 cagacggaat ttcaatcata cagccgatgc cgactttacc gaaggcatcg ccgcgttcgg
      661 caagctggcg gcgggcggtg tccaaatgaa tcaggcactg gcgcacttcg gatacggagg
      721 taatcatcgg ccacatcatc cgcacagggc cgtgtaccgc cgcacggagg atggcgcgca
      781 tctgggtgcg gaacatgacc ggttcggcaa ggcacaggcg gatgccggtc atgcccagcg
      841 cggggttgag gctgccgttg ggcgtgctgt ttttcccgaa ccagcggggg tttttatcca
      901 cgcccaaatc gactgtccgt atcgttacgc ttttgccctt catttttttg acaatcgcgc
      961 tgtacacttc gtactgctcg tcttcagacg gcatcgtatc gcggttcagg taaagaaact
     1021 cgctgcggaa cagcccgatg ccgtctgcgc cgaggttgtg cagcggtttc acgtcttcgg
     1081 cggattctat attgcccaca agctcgatgc agaccccgtc agcggtggcg gcggcggttt
     1141 ttttgagctt gttcaaatcg cgtttgtggc tgcggtattc gcgggcacgg cggcggtatt
     1201 cgttcaacac cgactcatcc ggcgcgataa tcaacacgcc gttgataccg tccacaatga
     1261 ccgtttcgcc ctcggtaatc agtttgcgcg cgttgtgcag cccgacgacg gacgggatgt
     1321 ccaagcccct gcccaaaatc gccgtatgcc cggtggggcc gccggcatcg gtaacgaagg
     1381 cggcaatgcg ctgctcttta aacaaaaccg tgtcggcggg cgaaaggtcg tttgcaatca
     1441 gaacggtttc gtcaaacagg ttgtcggcaa cttccaactc gttgccctgc ccgatcaggt
     1501 tgttgtggat gcggcggacg acttgcagca tatcctgctt gcgttcgcgc aaataggcat
     1561 cgtccatatt gtcgaattgg gcggcgagtt tgtcgctctg ctgcttcaat gcccactcgg
     1621 cgttgatttt ttgttccctt aaaatatcga cgggttcgcg cgacaaggta acatcggtca
     1681 agagcatcag gtgcagcgag atgaacgcgc ccaactcggt cggggcgttt tcgggaatcg
     1741 cgctgcggag ctgttccaac tctttgcgcg tggctttgac ggcggcatcg aaacgttcgg
     1801 cttcggcatc ggtgtccgcc tccgcaacat catactgcgg cacttcctcc gtaccgcgcg
     1861 caatcaggtg ggcgcaaccg acggcaatac ctttgcccgc cgccacgccg tgcagcacga
     1921 tactcattat tcgccctcgc cgaagtagcc gttgattaag tcggtcaggg cgcgcatcgc
     1981 ttccgcctcg tccgcgccgt ccgtctccag ttcgatgacc gtacccttgg cggcggcgag
     2041 catcatcagc cccataatgc ttttgccgtt gacgcggctg tcgtttttcg taacccagac
     2101 ttcgcttttg aattgggacg cggtttgggt gaacttgttg gacgcgcggg cgtggagtcc
     2161 gagtttgttg atgatttcga tggattgttt gagcatttcg attcccgtgt tatgtatatc
     2221 ggcagcagac gccgtttaaa atgttttcct gccctgccgc ttcttcagac ggcatcgccg
     2281 ctgcgccggc acaccaaatc ttcgggcgcg gacgtgatgg cgaaaatgcc ttttaccgcc
     2341 gcctccctga cgcattcggt aaaggcggca aggtcttccg ccgccggcga atattggacg
     2401 gccttaacca tcatcggcgc gttcagcccg gtcaaaatcg ccgatttgtt ttcgcgcacg
     2461 aggcggcggg cggcattgca gggggtcgca ccgaaaatat cggtcataat cagcacgccg
     2521 tcgttgtcgg gaaattcctg aagcgcggca atggcgttgt tgatgatgtc gtcttggtct
     2581 tccgtcggct gcacgccgag tatgcggacg ttttcaggca gtccgcccgg aaaaaaatga
     2641 tgcgccagct tgcggtaggc ttcgcctatg gtttcgtgtg tgatgattaa aagccctatc
     2701 atattatgcg tcctgttcct cattatcctg ccggcgtatg ggcgcgatgc cgtctgaaag
     2761 gccttcagac ggcatcgcgt ccttattttc cgtccaatgc gtaaatctcg cccagattgc
     2821 gccagcagcc cgccgcatcc atgccgtaac cgaaaacata acggttcggc acatccagtc
     2881 cgacataatc ggctcggata ggcttgggtt tgtcaatcag cttgttggcg aacaccgccg
     2941 cacggcagct tgccgcaccc atttccaaaa gtttggcttg aatggcggac atcgtatgcc
     3001 cttcgtccaa aatatcgtcc agcacgacga cgtgcctgcc ccggatttgt tccgcatcgg
     3061 gcatacgctt ccagttgaac gcgccgccct ccagcttgtc gccgtaacgg gaaacgtgaa
     3121 cataatcaaa atctaaggga aaacgcaaca gcggcagcaa ctgccccgta aacaccaccg
     3181 cgccgcccat cacgggcagc agcagcggat atttgccgcc caaatcgcgc gtaatctcgt
     3241 ccgccacttt ttgcagtgcg gcacggcatt ggccttggtc gaacaaaaga tcggcgtttt
     3301 caagcatcgc ctgtgtttca aggcgtttgg tttctaaatc ggtcatatgt cggaatcggt
     3361 cggtaaaagg aaaattataa accaaagtat cggatgccgt ctgaactgtc ctgctcagcg
     3421 gtcggtacgc acgcgcacaa acgtggcgaa tttcggcgtg cctttctgcg taaagccacg
     3481 gtagcggtag gtaatcagtg tgccgatttt gggcgggttg tctcggtctt tatctttgaa
     3541 gccgctgcca atgcggaatt cgccgtaccg gtttttgcag ccgaccgcgc ccaaccgtcc
     3601 ggcgtttcgc cctttgccct catagtaccg cgttaccgtg cattcgtcgt cgtattggct
     3661 tttcagcttc aataattggc tgctcctgcc gccgctgtaa cgggattcgg gctgacgcag
     3721 catcacgcct tcgccgccct gcgcttcgat ttgttttaaa aagtccatcg cgtgctgccg
     3781 gtcgcgcact ttgatttgtg ggatgatggt aatcggcgcg ttcggatgcg ttttcagcca
     3841 ctgcgttgcg actgccaaac gttggtagag attgccctgc gccttgggta catcgaaaac
     3901 gtgcaggcgg ataccgcgcc agtctgaaga agcagaacgc acggtagcgg aaatctgctc
     3961 gaactgaccg cgtccgctat acaattcgcc gtccaaagga taaggcggaa actgcgcggt
     4021 aaagcctttg ggcggtgtaa atacatatcc ttgccggctg actaaatgtt taccgtccca
     4081 atacgcgcgc acgccgtcga gtttctcgct catcgcccag cctgcaatct cttgaccttt
     4141 gtattcctgc gccagcatca aatccgccgc gcctgctgat gcagggatga aaaccgccgt
     4201 aaaaatcggt atgatgccgc cgattgtctt cttaatcatc tgattccccc aatatcaaaa
     4261 cgggcggcaa accgccataa aacaaacggc aaacccgatg ccgtctgaaa aaccgtttag
     4321 gaacacgccg atgaccctac gttacgaaat cttccccgtt acccccttcc gccaaaactg
     4381 caccctgatt tgggacgacg aaagcggcga agccgtcctg accgatgtcg gcggcgacgt
     4441 gccgttcctg ctgcaagcgt tggcaaaccg caaacttacg ctcacggcaa tctggctgac
     4501 gcacggccat ctcgatcacg cgggcggcgt ggtcgaaatg ttgaaaacgc ataaagtccc
     4561 tgtcctcggg ccgcatccgg acgatgaatt cctgctccaa tcgctgccgc aaaccaccgc
     4621 gcaatacgga tttcccgtct cgcccgcctt tgcgccgaac cgttggctcg aagaaggcga
     4681 aacgctcacg gtcggacgct atgcctttca agtgctgcat attccgggcc atacgccggg
     4741 acatatcgtc ttttattgtg ccgaggcgga attgctgatt gcgggcgacg tgctgtttta
     4801 cgaaaccata ggcagaaccg attttccgcg cggcaaccac gccgacttaa tcaataatat
     4861 ccgcaacaaa ttattcaccc ttcccgaaac cgtgcaagtt gtcgccggac acgggcgtat
     4921 gacttccatc ggacacgaaa agcggcacaa tccgtttttc taaccgcctt ccctacggtc
     4981 ttcagacggc atcccctgcc ccgatgccgt ctgaaacaca aaaggctcag acaaccgccg
     5041 ccttgccggt gtacctcgcc ggacaaggct ttggtaagta cttcaaacaa accccaaatc
     5101 agaaccggta cagttacgcc gcgctttcgg cattcccgcc cctgctgaaa caagcttttc
     5161 cgcacaagtc agactgcttc atcttctgcc acatattcca aagattccga caacgccgtt
     5221 gtttcattgg cacgttcggt caaatcgcgt gcaagctgct tgtttgcctt cacgcccaac
     5281 agacgcagct tctcggcgcg gccgaccaga ttcccgcgcc cctcggcaag ttgcttaaat
     5341 gccgtctgaa agctgttttg cgcctgatcg atgcctttgc cgacgctttc gagcgtctgt
     5401 acaaagccga caaatttgtc gtacagcttg ccgccttcgt ccgcaatcgc cagcgcgttt
     5461 tggttttgct gctcgttgcg ccaaatattc gccaccgtcc gcaaagtcgc cagcagcgta
     5521 ctggggccga ccagcataat ccgtttgtcg aaacactctt ggaacaatcc cgcgtcatgc
     5581 tgcaacgcca gcaggtaggc cggttcgaca gggataaaca taaagacgaa atccaatgtg
     5641 ttcacacctt ccaaatcggt gtaatccttc agcgacaagc ctttcatgtg tgcacggatg
     5701 ctggcaacgt gtgccgccag ttcgcgtgcc gccgtatccg catccgccgc ctgcgtgtag
     5761 cgcacataag ctgtcagcga gaccttggag tcaatcacaa tctgcttgtt gtcgggcagg
     5821 ttgaccaaaa cgtcgggctg gaggcggcgc gtgccgccgt cttcctcttt tcggacggat
     5881 gccgcctgaa ccacatattc gcgccctttc tggaggccgg aattttccaa aaccgtttcc
     5941 agaatcatct cgccccaatt accctgaacc ttgttctgcg tgccggtcag cgcgttggtc
     6001 agggcctttg cctcgctgtg cagctgcgca ttcaatcctt gaagccgttt caattcgttt
     6061 tccaacgtca gccgctcgcg cgattcttta tcataggttt gcttgaccaa ctcgccgaaa
     6121 ccgtggatgc gttcgtttag cgggttcaaa acctgatgga gctgctcgcg gttctgctcg
     6181 gtaaaacggc ggcttttttc ttccaaaatc gtgttggcaa gattttgaaa ctgatcgctc
     6241 aagctcttgc gcgcctcgcc cagtaaggac agcttctctt cagaagcaag gcgttcctgt
     6301 tcgatttgcg ttgccaaacg ttcgttttca accgccaaac cctgtgcctt ttcctgcaac
     6361 tcggtatgcg actgcctcaa ccgctccgct tccgcctctt tttcctgcaa atgggcaatc
     6421 tgtttttcgg ctgcggcaaa acggttgccg acatcggcaa ggtcgttttg cacgtcgcgg
     6481 acagtttggc ggctttcttc caaatcggtt tcgattcttt ggcggatttg gcgttccaag
     6541 gcatattggt cggcaaacgc cttccgttcc tgtccgagct gcgttgccaa acgttcgttt
     6601 tcaaccgcca aaccctgtgc cttttcctgc aactcgatat acgactgctt cagccgaacc
     6661 gattccgcct ctttttcctg caaatgggca atctgctttt cggctgcgga aaaacggttg
     6721 cccaaagcat aattttcgtc ctgcaaatgt cggtatttcc cgtccaaaac ggccaattcc
     6781 gatgcaattt ctgcgtgtgc ctgttcgaca aaatcacatc ttgccgcctt ttccgccagt
     6841 tgcgcgttca aatcggcaaa ctcgccctga aacctgccct tcatcagcaa ccatgtaaac
     6901 aacacgcccg acaccaacgc cgccaaaggc agcaaaacag tcatcagttc catcaatcat
     6961 cctaatattc aaacattttc acaccggaca aaaccgccgc ttattccgat tctacctgtt
     7021 tgttcgacat agctccaaaa aatatagcgg attggcttta aacctgttcg acatcgcctt
     7081 accatgctgc ttgcggtttc agaccttttc ctaattcaat atcaatctgc cacaaaccct
     7141 gattaagttc ccgatgtctg acatttttag aatgatgccg tctgaaatgt tgcagctatg
     7201 ttcagacggc atacggattt aggcttttca aacggcaggc aaaatgaaaa aagggcaaac
     7261 cctaaaggat ttgccctttt gttccaaacg cttagtgtac gtctttccaa tattcttttt
     7321 tcaggaaata cgccaaaggc agcataaccg caaataggaa aatcatcacg acatagccta
     7381 tacgtttgcg ttgcagttgt gcaggttcgc ccatgtacac aaggtaattg accaaatcgc
     7441 gtacatatgc gtcgtactct ttttggatca ctttgccgtt aggcagacgg cggctgtgca
     7501 aaccggtaga ttcccaatac agcttaggct tcatctcgcc gtgttcgtct tttaccataa
     7561 ccggctgacc tttggcatcc aactcaacgg cttgaacgcc ttgctgttcc cacaacgggt
     7621 ggggcatacc gactttatcg aatacagtat tgttccagcc gctcggacgg gtcggatctt
     7681 tatagaagcc gcgcatataa gcgtaaaggt agtctgcacc tttggaacgc gcaatcaatg
     7741 tcaaatcggg cggagcagca ccaaaccatt ttgccgcatc tttcgggttc atcgccgaat
     7801 gcatgacatc gccgacatta tcggtggtaa acatcaggtt tttcttgatt tcttcgtcag
     7861 tcaaaccgat gtctttcaaa cggttgaaac gcataccgct tgccgagtgg caggacaggc
     7921 aatagttggt aaagatttgt gcgccgcgct gcaggctgac ttggtcgcgc aaatcgatat
     7981 cgactttctc atagtgtgca tgaccgcccg aagcaaatgc cgcacccatg ggtactgcca
     8041 acagcaaggc agcaaaccaa tttttcatag cttgtttcat tttgactgcc ctcatcagat
     8101 gttggttgca aacaggtaag cacccacggc ggtaatgccg acgtaaacaa agaacatgat
     8161 tttttgtttg gcggtgctca tggttacgcg ttcgggaacc ggtttgtttt tatccagctt
     8221 ggtatagaac ggcataccca ggaagaatgc gaaatagacg aaggacagga tgcgcgcgac
     8281 caaagtacgc gtatcggttg ccaccatcgc gcccaaaata cccaaaccga taaaggaaat
     8341 gatgaacaag accaatgcgg ttttgaaaat cggaccgcgg taacggacgg atttcacctc
     8401 gcccctatcc agccaaggca gcagggcaat caacacgacc gccgcgccca taccgattac
     8461 accccaaacc tgcgttccca agaacgaggg aatcgcacgc aaaatggcgt agaacggtgt
     8521 gaaataccat accggcgcaa tgtgcggggg tgttttcagc gcatttgccg catcgaagtt
     8581 cggcgcttcg aggaagtagc cgccgccttc cggtgcgaag aacaatacgg cacagaagac
     8641 aatcaggaat acaaccacac ccaagatgtc tttaacggta tagtaaggat ggaatgggat
     8701 accgtcgcgc gggataccgt tttcgtcttt gtttttcttg atttcaacgc cgtcagggtt
     8761 gttagaaccc acttcgtgca gggcgatgat gtgcgccaca accaagccga gcaataccag
     8821 aggtaccgcg ataacgtgca gggcaaagaa acggttcagg gtaacgtcgg aaacgttgaa
     8881 gtcgccgcga atccaagtgg acaaatccgg accgataaca gggatggcgg agaacaggtt
     8941 aataattacc tgcgcccccc aaaaggacat ctgaccccaa ggcagcaggt agcccataaa
     9001 ggcttccgcc atcaatgcca agaaaatcag agaaccgaaa atccacacca actcacgggg
     9061 ttttttgtac gaaccgtaaa tcaaaccacg gaacatgtgc agataaacaa caatgaagaa
     9121 gaaagatgcg ccggtggaat gcatgtagcg gataatccaa ccgccggaca cgtcgcgcat
     9181 gatgtactcg actgcagtaa aggcagcagg cagatggtag gcgttcaggt tgccgtcggg
     9241 tttgtagttc atggtcagga aaatgccgct gacgatttga atcacgagga caagcagggc
     9301 caaagagccg aagtagtacc aaaaattaaa gtttttcggt gcgtagtatt gagccaaatg
     9361 ctcattccac attttagaca gggggaaacg agcgtccatc cagcctaaca atgcttttgc
     9421 tttgctattg gtttggtttg ccataattat cgttccttat tcttagtctt cgcccaccaa
     9481 gatagttgtg tcgctcaagt atttatatgg cgggacaacc aggttggtcg gggcaggaac
     9541 acctttatat acgcggccgg ccaagtcgaa tttcgaaccg tggcaggggc agaagaagcc
     9601 gcctttccag tctgcaccca aatcggcggg ggcaatgtcg ggacggaagg tgggcgagca
     9661 gcccaaatgg gtgcagatac cgatggcgac aaggatgttc ggcttaatcg aacgggtctc
     9721 gtttttagca tactccggct gctgttccgc atcggaattg ggatcggtaa gttcgccgtt
     9781 caggcctttc aggtctttaa gctgctgatc tgtacggttg agcacccaaa tcggtttgcc
     9841 ttgccactcg gcggtcagca gctgacccgc ttcgatttta ctgacatcca cctcgacggc
     9901 agcaccggcg gccttggctt tttccgaagg gaaaaaactg gccacaaacg gcgttgccac
     9961 acccaatgct gccactccgc ccgcgccgca ggtcgcgagt gtcaggaaac ggcggcggcc
    10021 gttgttgatt tcttgattat ccattattca gtcgtcctaa tattttggga ataccgagcc
    10081 attaaacgtt gcaattttac ccagtttgca gtgatactca aagcattatt taaaataagg
    10141 taaagtttta tgatatttct caagactcaa gccggattgt tttcgtcaaa atggcacact
    10201 tccaacccaa aaacctctgc cgccgattct gccagcgcgc gtacgccgta acgttccgtc
    10261 gcgtgatgcc ctgccgaaat gaaagccgta cccgtttcat tggcaaggtg gtattgggct
    10321 tcagagattt cccccgtcaa atacagatcg acaccttcgt ctattgccgt ctgaaaaaac
    10381 ccctgcgccc cgccgctgca ccatgcaacc cgtcggattt cgcgttcggg tttgccgatg
    10441 acgacaggct tacgttgcaa aactgtttca atatgcgccg ccaatgcgcc gagtgtcttg
    10501 gcttgtttca ggctgcccga gttgagcagg ttttgttcgc cgaaccgttt ttctgtcgca
    10561 aaacccaatc tgtcggcgag ttgggcattg ttgcccagtg tgggatgtgc atccaggggc
    10621 agatggtagc ctgccatatt gatgtcgtgc cgtaacagtg cggcaatccg ttcttttttc
    10681 caaccagtaa cggtcggcaa ctcgtttttc cagaacatac cgtgatgtac caaaagcaaa
    10741 tctgccttct gctccacagc aaaatcaatc gctgccctgc ttgccgttac cgacgtaacg
    10801 attttcccga tatattccct cccttcaacc tgcaaaccgt taggggagta atctttaaac
    10861 aacgctgtct gcaatgtttc attacaccaa gtcagaaaat ccctgcgcaa taccatcttt
    10921 tttcctaatc gctttaaaca agcgggcatt ctaatcgcaa aatgtccgga attcacattt
    10981 ttccgatttg cacccgcata tgaattattt taatatgcgc cggttcaata tgccgtctga
    11041 agccccatgg attccattat cgaattgcgc cacctcaaaa ccctgctggc acttgaagaa
    11101 accggcagtg tctcccttgc cgccaaacgg gttttcctta cccaatccgc cctttcccac
    11161 caaatccgta tgctcgaaaa ccactacggc acgccgctgt tcgaacgcaa atccacgccc
    11221 ttgcgcttta ccccggtggg cgaaaggctg ctgcgcctcg cccacgaact tatacctcaa
    11281 gttgctgttg cagaatggga tttggcgcga atcacggaag gagaggcggg agagctgcgg
    11341 attgccgtcg aatgccatac ctgtttcgac tggctgatgc ccgccatggg cgaattccgc
    11401 ccgatgtggc cccaagtcga attggatatc gtatcgggat tccaagcgga tcccgtcgga
    11461 ctgctgctgc aacaccgtgc cgaccttgcc attgtttccg aagcggaaaa acaaaacgat
    11521 atttctttcc aaccgctgtt tgcctacgaa atggtcggca tttgcgcacc agaccatccg
    11581 cttgccgcca aaaacgtttg gacggcggaa gactttatcg gggaaaccct gattacttat
    11641 cccgttcccg acgagatgct ggatttgccc aaaaaaatcc tgattccgaa aaacatcaac
    11701 ccgccgcgcc gacacagcga actgaccatc gccattatcc aactggttgc cagcagacgt
    11761 ggcattgccg cccttcccta ttggacagtc atgccctacc ttgaaaaagg ctatgtcgtc
    11821 caccgccaaa ttactgccga cggactgcaa agcaaactgt atgccgccat ccgtaccgaa
    11881 gatacggaca agagctatct gaacaatttt tgccaaatca tacgcgaacg cggttttgca
    11941 gatttgcccg gactgagcga actggaaccg gtctgacccc ttattcaacc atacccggca
    12001 gtttttctat tttttcatgt atagtggatt aacaaaaacc agtacggcgt tgcctcgcct
    12061 tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
    12121 tatactgttt ttgatttttg cccaatctgt aatctttaga ttgccaatgg gaaaccgtct
    12181 actacaaata aaaaaccctg cgataagcag ggttttttga atttccaaca ttaacgtttg
    12241 gagaattgtt ttgcacggcg tgctttgcgc agacccggtt ttttacgttc gacttcgcgg
    12301 gcatcgcgag taacgaaacc ggcttgagac aaggcgggtt tcaacgcggc atcgaagtcg
    12361 atcagggcac gggtaatgcc gtggcggatt gcgccggact ggccggtttc gccgccgcca
    12421 acaacattga ctttgatgtc gaaagattcg gcgttttcag tcagaaccaa gggttggcga
    12481 acaaccattc ggctggtttc gcgtgcgaag aattcgtcaa cgggacggcc gtttacgatg
    12541 atttgacctg tacctttaat caggaataca cgagccactg aacttttgcg gcggcctgtg
    12601 ccgtagtagt atttaccgtt catgtcgcgt ccttatttca gttccaaaac tttgggttgt
    12661 tgcgcagcat gggcgtgttc cgcacccgca tacactttca gttttttaat catggcgtaa
    12721 cccaaaggac ctttgggcag catacctttt acagcttgtt ccaaagcgcg gcccgggaat
    12781 tgctcttgca tttcgcggaa agtgcgttcg tagataccgc ctgggaaacc ggaatggcgg
    12841 aagtattttt tatcttcgaa tttggcaccg gttacacgca gtttgtccgc attgataaca
    12901 atgatgtaat cgccggtatc gacgtggggg gtgtattcag gtttgtgttt gccacgcaga
    12961 cggctggcga cttcggccgc aacgcgaccc aagactttgt cttgggcatc gatgacgaac
    13021 cattcgcgct tcacctcgtg gggtttcgct gaaaaggttt tcatagtgga aatccagata
    13081 gatatagaaa gttgtaaatt ctaaagacag gattcgattt tgtcaatcgc attaccgcgt
    13141 tacggaagga ttttccggat ttcggcagac tgcatactgc tttttcgggc ggggcggcgg
    13201 ccaatgtgaa aaaccgcatc gttgcgatgc ggttttgaat gggaatcccc gcgagagccg
    13261 tttcggccga atccgcttga accttgctga caaggcggct gcctcgggta gtttcgggtg
    13321 cgtccgcaaa aggacgctcg cgcccactac tgctcccggc aaccttaagc gaacttattg
    13381 gttcaaagga atatatgcct tcgcggacac cgcagggaaa aaggggttat tcctgcgcca
    13441 agcgggatag tgctttttgg caggcgttgt ccatatcggc tattttacgc gcaaaatcgc
    13501 cgattgccaa atcgccgccg ttcagggagg ttttcagcag gtcgtggacg acgttgagcg
    13561 cggccataat gacgattttt tcgctgtccg cgacgcgtcc gccttcgcgg atggcttcgg
    13621 ctttgccgtt gagcattccg actgcctgca acagtgtgtc tttttcttct gccggcgtgt
    13681 tgacggtcag ccgggcgtgc atgacttcga tgtggacttg ttcgatgttc atcctttaat
    13741 ccttattgct gcgtttcctg ccgttggggg aggcgcgctg ccagtgcgct gattttttcc
    13801 ctgctctgtt cgagcaggct gcggtatcgt gtattttctt ctgtcaggct gtcaattttg
    13861 ttttgcaggt cttctttgag tttgccgact tggacgagca gggcttcgct gagttcgtcg
    13921 acggcggttt cgtgttcgag tttttgccgc tcgtgcgccc gtttgagttc ggcgacggtt
    13981 tctttgaggc ggcggttttc gctgacgagg gtttcgaatt tttgtaccag cgtataaacg
    14041 ctgctttcga gtttttcgat attttgtttc ataaccttac ctgtccgtat gccgtctgaa
    14101 ggcttcagac ggcatctgtc tgttgtttat tcgaaacgcg cgctgcgttc catcagtctt
    14161 tcgacgacct gctgaggggt catttctttg cggatgagtt gcagcagggt ttgggtaatc
    14221 ggcatgtcga tttggtactt acaggcagta ttgaagactt cttctatcgt gctgacccct
    14281 tcggaaacgt gtccgatttc gaccagcacc tgatgcagtt ccttgccttc tgccaaaccc
    14341 aagccgacgc ggcggttgcg tgagagtgcg ccggtgcagg tcaagatgag gtcgccgatg
    14401 ccagcaagcc ccatcatggt tttgggctgt gcgcccattg cggaggcaag gcgggtgatt
    14461 tcagctaatc cgcgtgtaac cagtgcggca cgggcgttaa gcccgtactc cagaccgtcg
    14521 gacaatccgg tggcaatcgc catgacgttt ttgactgcac cgccgactgc cacgccgata
    14581 acgtcggtac tgccgtaaag cctcatgacg gtcgtgttga gctgcggtac gagttcttca
    14641 atccactctt ggttttcgga ggcgaggacg acggcgcagg gcagttgttt ggcgagttcc
    14701 tgtgcaaaac tcggaccgga aagtacgccg atttttttat tgtcgggcaa tacttctttc
    14761 aatacttgaa aggtcagcag ccctgtatcc tgctcgaatc ctttgcaggc ggcgaggacg
    14821 gggaggtgtc ccgcgccgta ctgtttgagc agctctgcgc tgcttctcaa tccggcaacg
    14881 gaggttacga taaggacaag tccgctgtct ttgagcgcgt ctgccaaatc cgcacacact
    14941 tccaaggttt cgggaaagga aaagccgggc agtccgcgtt tgttttcacg cgcttcctgc
    15001 atttggcgga cttggtctgc gttgcgcgtc cacagggata cgcggttgcc gtgttgggaa
    15061 aaatgcaggg cgagcgccgt accccacgaa cctgcgccga taacggtaat tttcattggt
    15121 cgtctttcaa catatcactg ccgttcactt taaaacaatc ggtgtttctc tgcaagtgcg
    15181 gtcagggaaa tgccgtctga aaggcgttca gacggcattt tgccccgatg cggcactatc
    15241 agcctgtatt gcgcaaacct tgcgccacgc cgttgatggt caggtgaacc atcagcagcg
    15301 cgtgcggatt gtcgggttct ttacgcaggc gtttgagcat ggcgacctgc aggccgttga
    15361 gcgcgttcaa atatggaatc ctcaaggcaa gcgaacgggc gaggctgcgg ttgtcgcgca
    15421 ggagctcttc ggtttgcagc aagtcgagca gtgctttgcg gctgcgttgg tattcttcct
    15481 tgatcatgcc gaagatgact tttgctttgt cgggtgattc gctcaagccg gcatagtttt
    15541 ccgccaaggt gatgtcggtt ttcgccatca cttgttccat attggagagc atggcttgga
    15601 agaacgggtt gctttgggcg tgttcgcgca gggcggcgag cgtttcgggt ttgtcttcgc
    15661 acaaggtttc caccgcgctg ccgaaaccgt accaagcagg cagcatgagg cggttttgca
    15721 tccaggaaaa tacccacgga atcgcgcgca agtcttgaat ccgcgctaag gtcttgcggc
    15781 tggcgggacg gctgccgagg ttgagggtgg cgatttcctg aatcgggctg gtttgcagga
    15841 agtagtcgat gaagtcgggg tgggtaatca gttcgcggta gtatttgaac gatacgtccg
    15901 acaatgcctg catcagtttg gcatcagggt cttttttatc cggcaggatg ccggcttcca
    15961 aagtcgcggc aaccaaggtt tccaagttgc gttgggcatt gccggggtcg gcgtatttgg
    16021 cggtaatgac ttcgccttgt tcggtaatgc ggatttgtcc ggcaacgctg cccgccggtt
    16081 gggcgagaat ggcttggtaa gacggaccgc cgccgcgtcc gacgctgccg ccgcgaccgt
    16141 ggaacaggcg catgcggaca tcgtattttt tgaagagttc gaccaagccc aattccgcct
    16201 gatacagaca ccatgagctg gtaacatagc cgccgtcttt gttggagtcg gagtagccga
    16261 gcataatttc ttggatgttg ccgcggcttt cgagcagggc atcgtaccaa tcgaggcgga
    16321 acatggtttc catgaccgga caggcgtttt cgagtgcttc gatggtttca aacagcggca
    16381 cgatattgat gcggctgtgc ggtttgccgt tttccaccgc caacaggccg ctttctttca
    16441 gcagcaatgc caaggcgagc aggtcgctgg gttgttcgca gttggaaata atgctttgtg
    16501 ttacggcatc ttcgccaaat tcgtctttga ttttgcgcgc ttcgttgaaa attgccagtt
    16561 cgtggcgggt atggtcgctg tatgtgatga acgggctgta cagcggacgt tgatggctca
    16621 attctcgcaa caggacggct tgtttttgtt cttcgttcag gctgttgtag tcttccaagc
    16681 ctgcgtgttg gaaaagctcg gcaaccacat cggcgtgttt gcctgcgtgt tggcgcaggt
    16741 cgagcggcat catgtggaag ccgaacacgg acacggaacg gatgaggtct gccaaacggc
    16801 cttcggcaag caggcggctg ccgttgtcga taagggaacg ttgcaatttt ttcaaatcat
    16861 cgagaaattc ttgtgccgaa gcatacggct cgagaaagcc gaatttgcag cccatgccca
    16921 aaccgagcgc gcgcgctttg cccatagcgc gcgccatgat gtaagcaatg gcgcggcggt
    16981 agggttcttc cgtgcgggca agttcttcgt caggcgagag ggctgccagt gccattacgt
    17041 cgtcgttgac tttgacgcgg cggatggaga gcggcagttc gcggtaaagt ttgtcgagtt
    17101 cgccacggta aaaacggaac acggcatcgg cgtggcggcg gaaggcaaaa cgcaaggttt
    17161 cggcagaaac gaacggattg ccgtcgcggt cgccaccgat ccagccgccg attttgagga
    17221 tattcggaac gcagacatcg ggatagacca tctgaaagtc gtgttccata ttgcggtaga
    17281 gcttgggcag ggcttcgaaa aagctcatcg ggaagatgga cacgccgttg ttgatttcgt
    17341 cgttgacgct gagtttgtgg cggcgcgttt cgctggtctg ccacaagccc agcaggatag
    17401 tgtcgatttc gcggcgcagc cgtgccagcg cgtcggcatt ggtgcagcgt tcgcgttgcg
    17461 gcagcagcgc gcggatgcgg cggttgaaat tcaaaacggt ttggcgttgc acttcggtcg
    17521 ggtgcgcggt caaaacggcg gtaacggacg tattgtccaa ctgccgctgc accgatttgc
    17581 cgtcggcttt ccccgctttg agcctgcgga cggtttccgt caggctgcct tccgcgccgc
    17641 cgcgtccggc ttcttcgtgg atttggcggc ggcgttcgtg gtgcacgtct tcggcgatat
    17701 tcaaaatctg ggcgaacagg ccgcaggcca aggttaaatc gtgggtttgt tgttcgtcca
    17761 attgcggcaa tactttttca atcaatgccg cgctgtcgtc ggaagtggac aagagtttga
    17821 ccgtttcgac aaccaatggc gaggcttctt cgtgcaggag gttgaacagg gattgtttca
    17881 gaaattccgc gtccgccgcc aaagccgcgt cctttggatt gttcagaata tgcagttgca
    17941 tgatttttct ctcattgccg taaatactgt aaatgtacct caaatgccgc atccgtgcca
    18001 aaccgttcac actttaaccg cccgtgtccc gaaatgccgt ctgaagttga acgccgcccg
    18061 acggcagcgt tacaatcgcc cacaactgtt ttttccgaac atcatcatga ccacgaccga
    18121 acacgacaac gacgatgcat tcctgctgcg gtacagccgc cacatcctct tggacgaaat
    18181 tggcatcgaa gggcagcaga aactttccgc cgcgcatatt ttggtcgtcg gctgcggcgg
    18241 tttgggtgcc gccgccctgc cctatctcgc cgcttccggc atcggcacgc tgaccatagc
    18301 cgattccgac acggtcgagc tgcacaacct gcaacgccaa gtcgcatttg acgagggcga
    18361 tgtcggcaag cccaaagccg aagccttggc agaccgcctg aaacgcatca accataacgt
    18421 cgatgtccgc accgtcaacg aaaaactcga cggctgccgc ctgaccggtt tggttcaaac
    18481 cgccgacatc gttttagact gctgcgacaa ctacgccacg cgccaagccg tcaaccgtgt
    18541 ctgcgtacaa acgaaaacac cgctggtttc aggagcagcg gtgcgctttg aagggcaact
    18601 tgccgtgtac cgtcccgact tgcccgactc gccgtgttac gcctgcctgt ttgacggcgg
    18661 atcggcttca gacggcatct gttccctctt cggcgtgttc tcgccgctgg tcggcatcat
    18721 cggcagtacc caagcgacgg aggctctgaa aatcctgctg gatgcgggcg aaccgtcgca
    18781 cggcaggctg gcggtttacc gtgccttgga agggggctgg caatatttcg acctgccgcg
    18841 caaccccgaa tgcccgattt gcggcgcgga acggtaaaac cctgccgccg tttcagacgg
    18901 tatccaaacg gatgcggcgg aacggtttta aaaatttaaa aatttacatt tctttgcaaa
    18961 aaaaaaaaaa aaaaaaaata aacttacctt ataattgcag ttgttttagc aatgtctgtt
    19021 tcgcagactc attgagtaag acgttttccc cgtaatgtgt ttggccgtct gtcccctttg
    19081 ggttcggacg gctttttttt ggctgtgtat gaatacccgg ttggttttat ctgtttacag
    19141 gggaaaaccg cttatttccg ttcgggcgga aaacggttcc atcggataaa aggcattttg
    19201 tccgactgat taaag
//
LOCUS       DAWGBY010000029        18678 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.029, whole genome shotgun sequence.
ACCESSION   DAWGBY010000029 DAWGBY010000000
VERSION     DAWGBY010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18678
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.029"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..66)
                     /locus_tag="WHG62_000870"
     CDS             complement(<1..66)
                     /locus_tag="WHG62_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ1725003.1"
                     /translation="MLPSKYEDNALQIKEKSTERTA"
     gene            complement(283..2340)
                     /gene="ppk1"
                     /locus_tag="WHG62_000871"
     CDS             complement(283..2340)
                     /gene="ppk1"
                     /locus_tag="WHG62_000871"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ1725004.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGAQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDLQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(2509..2952)
                     /locus_tag="WHG62_000872"
     CDS             complement(2509..2952)
                     /locus_tag="WHG62_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ1725005.1"
                     /translation="MPLRLLLGILCCLPIFAPAHAQGQPDTVGDFIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(2959..3474)
                     /locus_tag="WHG62_000873"
     CDS             complement(2959..3474)
                     /locus_tag="WHG62_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ1725006.1"
                     /translation="MKIKQIVKPGLAVLAAGILSACATKSNVKADGATDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVHEWDYLFHFHTPGV
                     GIDPENTSGVEGVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            3741..6371
                     /locus_tag="WHG62_000874"
     CDS             3741..6371
                     /locus_tag="WHG62_000874"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ1725007.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     AAAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVSVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVFAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLHHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPAVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            6607..7419
                     /locus_tag="WHG62_000875"
     CDS             6607..7419
                     /locus_tag="WHG62_000875"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HEZ1725008.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEHYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KNLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKESFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            7412..8221
                     /locus_tag="WHG62_000876"
     CDS             7412..8221
                     /locus_tag="WHG62_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ1725009.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFSDPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            8218..8772
                     /locus_tag="WHG62_000877"
     CDS             8218..8772
                     /locus_tag="WHG62_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725010.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRTLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYNINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
     gene            complement(9647..9958)
                     /locus_tag="WHG62_000878"
     CDS             complement(9647..9958)
                     /locus_tag="WHG62_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ1725011.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(9955..10322)
                     /locus_tag="WHG62_000879"
                     /pseudo
     CDS             complement(9955..10322)
                     /locus_tag="WHG62_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(10755..12149)
                     /locus_tag="WHG62_000880"
     CDS             complement(10755..12149)
                     /locus_tag="WHG62_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HEZ1725012.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLIDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(12223..13563)
                     /locus_tag="WHG62_000881"
     CDS             complement(12223..13563)
                     /locus_tag="WHG62_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ1725013.1"
                     /translation="MLNPSRKLVELIRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALTECGAAWLEPDRAAQEGRLKDQ"
     gene            13706..14332
                     /locus_tag="WHG62_000882"
     CDS             13706..14332
                     /locus_tag="WHG62_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ1725014.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIVIYVVMGWMVLAVMKSLTASLPSAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(14396..15814)
                     /locus_tag="WHG62_000883"
     CDS             complement(14396..15814)
                     /locus_tag="WHG62_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ1725015.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            16141..16869
                     /locus_tag="WHG62_000884"
     CDS             16141..16869
                     /locus_tag="WHG62_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ1725016.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(16928..17416)
                     /locus_tag="WHG62_000885"
     CDS             complement(16928..17416)
                     /locus_tag="WHG62_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ1725017.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(18173..18637)
                     /locus_tag="WHG62_000886"
     CDS             complement(18173..18637)
                     /locus_tag="WHG62_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEZ1725018.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         4618 a         4864 c         4778 g         4418 t
ORIGIN      
        1 agcagttctt tctgtacttt tttctttaat ttgcagtgcg ttatcttcat atttcgaggg
       61 taacatatct gctaatctag tacagcccct aaaatttaat ccactataat gccgtttgga
      121 atgcggcgga ttggggttgg gagcgtatag gggaagtgct tgtgcgggaa tggcgaaggt
      181 gtgtttttga ttccagtccg ccctgtttag attgctgtaa aaccatgccg tctgaaacgg
      241 aaaggtttca gacggcatgg tttttgattg gggcggtgcg ggtcagcctc cgagcagtgt
      301 ccacaaatcg ttttgcaggt cggcttcgct ttcgccctcg gcaggcgcgg cgcggatata
      361 gccgccgtcg ggctgcatca gccacgcgtg cgtattgtct gccagtgcca tttccaaacc
      421 ttcgcggatg acgcgttttt tgagttcggg cgcggtaatc ggcgcggcgg tttcgatgcg
      481 gcggaagaag ttgcgcccca tccaatccgc gctggagata aaggtatcgt ccgcgccgtt
      541 gttgtggaag caatacacgc gcgcgtgttc gagctgcctg ccgatgatgg agcggacgcg
      601 gatgttttcg gacaagcctt ttacacccgg gcgcaaggtg cacataccgc gcacaatcaa
      661 atcgatttgt acgcctgctg cgcttgcccg atacagggct tcgatgacgg tcggttcgat
      721 gagcgaattc atcttggcgg taatccgcgc cggtttgccg gcttttgcgt gttcggtttc
      781 gcgtgcgatg cggtcgataa ccattttgtg cagggtaaac gggctttggt agagtttgtt
      841 cagccgcccg ggtttgccca agcctgtgat ttccataaac aatgtgttca catcggcggt
      901 gatttgttcg tcggcggtaa tgatgccgaa gtcggtgtag atgcgcgatg tgccttggtg
      961 gtagttaccc gtgccgaggt gggcgtaacg cttgagtacg ccgtcttcgc ggcggatgac
     1021 cagtgccatt ttggcgtgga ctttgtagcc gaacacgccg tacacgacgt gcgcgcccgc
     1081 ctcttcgagc tgcttcgccc agttgacgtt gttggcttcg tcaaaacgcg ccatcagttc
     1141 gacgacgacg gttacttgtt tgccggcgag tgccgccttc atcagggcgc ggacgagttc
     1201 ggaacgcgtg ccggtgcggt aaatcgtcat tttgacggca agcacgtcgg ggtcggcggc
     1261 agcttcgcgc atcatttcga caacggggtc gaacgattgg taggggtggt gcagcaggat
     1321 gggcgattgg cgcaccaaat cgaatatgga cgcggttttg cccaaggctt tcagtctgcc
     1381 cggcgtgtgt gtgggaaatt tcaaatcggg gcggttgact aggtcgggga cggcgttgag
     1441 gcgcacgagg ttgaccgggc ctttgacctg atagagttcg gcggcggtca gtttgaattg
     1501 cgcgagcaga aagtcgcgga tgtaggcggg acaggtgtcg gcgacttcga gccgcacgcc
     1561 gtcgccgtat tcgcggtcgt gcagttcgtt ttggatggcg gcgcggaggt tttgcaggtc
     1621 ttcttcgtca acggtcaagt cgctgtcgcg cgtcaggcgg aactggtggc agcctttgac
     1681 gttcatgccc gggaagagtt tgccgacgtg ggcgtggagg atggacgaca ggaagacgaa
     1741 gccgtgtccg ccgccacaca gttcggacgg caggggaacg acgcgcggca ggatgcgcgg
     1801 tgcctgcaca atcgccatcc ccgaaggcct gccgaatgcg tccgtgccgt cgagttcgac
     1861 ggcgaagttg agcgatttgt tcagcggtcg cgggaagggg tgggacgggt cgagtccgat
     1921 gggggtcagg atcggcagca gttcgcggtc gaaatagtct tcgatccatt ttttctgcgc
     1981 gcccgtccag ttgcggcggc ggtaaaaatg gatgctttcc cgcgccaact cgggctgaag
     2041 gacgttgttg aacaggtcgt actggtgccg tatcagggag cgcgccgctt cggtaacgtc
     2101 ggcgatggtt tcagacggca ttttgccgtt gtccagcctg cgccgggggt gcagcttgtt
     2161 ttcacgcttg agccacgcca tgcggacttc gaaaaactcg tcaagattgg acgacacgat
     2221 gcacaggaag cgcaggcgtt ccaaaagggg gacgtttttg tcttccgcct gtgccaacac
     2281 gcggcggttg aatgccagca ggcttagttc gcggcagagg atgcggtttt gttcgggcat
     2341 aaggttctcc caaagatggt tgttgttcgg tcggagcggg caggcaatgc cgtctgaagg
     2401 cttggcggca tctgcgccgg tttcagacgg catgacgtgg cggacagtct gtttcaggca
     2461 tcggggcaat gtgaaaacag ataccggcgc gtgcggtatc cgtctgtttc aaatcacttc
     2521 caacacaaaa taatgacgca gtttttcgta caccgcatcg ctgacgttga tgcagccgtt
     2581 ggtcataatc ctgtcggaca cggacgggga ggcgatgcgt tcgttccgcc tttccgacgg
     2641 tatctgattc caaacgcggt gcagggcgaa aagaaaatca ccctcctgct tgaaaccgat
     2701 gacttcgccg ccgtatccgg gcttgtcggt actgttcagc gtcagcccga acgtcccctt
     2761 gggcgtggca acaccgatga ggacggggtg gcactgacgg tcgtcagcga aacagagttc
     2821 cgctttggat gtatcgacga tgactttttt cttttggata aagtcgccga ccgtatccgg
     2881 ctgcccctgc gcgtgcgcgg gggcaaaaat cggcaggcag cacaatatcc ctaaaagcag
     2941 gcgcaacggc atagcggctt attggcggat acgtttcggt tttgccggca cgatttcgcg
     3001 gatgatgact tgcggctcgg ctttgggtgc tggcggcggg caggcggcat ctttcgggaa
     3061 gacggggttc cagtaaaagc tgcgggcaaa tttgtcttta tcgaaaatca ctttgtattg
     3121 gcaggtagta acgccttcca cgccggacgt gttttcaggg tcgataccta cgcccggggt
     3181 atggaagtgg aacaggtaat cccattcgtg tacgccgtac atgccttcgt cgtaatgcgg
     3241 gcgacccagg attttgtaga tgtcgtcttt ggtcaggccg gggcgcatct gatccagttc
     3301 gtcataggtc gggaatgtgc cgcgcttgtt gtcgagcgtt acggaatagg gtttcgggaa
     3361 aaccggattg tcggtcgctc cgtcggcttt gacgttgctt ttggttgcgc aggcagacag
     3421 aatgcccgcc gccaatactg ccaagcccgg tttgacgatt tgtttgattt tcatatgcag
     3481 aatccttttt tacccgatgc ccgtctgcct tttgttcgga agagccgcat caggagagtt
     3541 ttaaacattt gattttggtt tgtaatatta gcataaaaaa cgtgcgtatc agtaaacgcg
     3601 gtgtatttgt acggcatacg gaatgatgcg cgtgcgaatt tacgcatcct gccggcaatt
     3661 tgccgattcg ccgacatcgg caacctgtta taattcctcc tttaaattcc taacgttttc
     3721 aagcgaaaaa cagaatgacc atgcaagaac attaccaacc cgccgccatc gagcctgcgg
     3781 cgcagaaaaa atgggacgac gcccgtattt tcaacgtctc cgaagacgct tccaaaccca
     3841 aatactactg cctctccatg ttcccctacc ccagcggcaa gctgcatatg gggcatgtgc
     3901 gcaactacac catcggcgac gtattgagcc gcttcaaact tttaaacggc ttcaacgtca
     3961 tgcagcctat gggttgggac gcgttcggca tgccggcgga aaacgcggcg atgaaaaaca
     4021 acgtcgcacc cgccgcatgg acgtacgaca acatcgaata catgaaaacc cagctcaaaa
     4081 gcctgggttt tgcgattgac tgggcgcgcg aaaccgcaac ctgcaaaccc gaatactacc
     4141 gttgggaaca atggctgttt accaagctgt ttgaaaaagg catcgtctat cgcaaaaacg
     4201 gcacggtgaa ctgggaccct gtcgaccaaa ccgtccttgc caacgagcaa gttatcgacg
     4261 ggcgcggctg gcgttcgggc gcgttgatcg aaaaacgcga aatcccgatg tattacttca
     4321 aaatcacgga ttacgccgaa gagctgctca acgacttgga caagctggaa cactggccgg
     4381 aacaagtcaa aaccatgcag cgcaactgga tcggcaaatc gcgcggtatg accgtgcgct
     4441 tcgccgtttc agacgacagc aaacaaggct tggaaggcga ttacgcgaaa ttcctgcaag
     4501 tttataccac ccgccccgac acgctgatgg gtgcgactta tgttgccgtt gccgccgagc
     4561 atccgctggc agccgccgca gccgccgaca aacccgaatt gcaggcattt attgccgaat
     4621 gcaaagccgg ttcggttgcc gaagccgata tggcgacgat ggagaaaaaa ggcgtgccga
     4681 ccggtcgcta cgtcgtcaac ccgctcaacg gcgacaagct ggaagtgtgg attgccaact
     4741 atgtattgtg gggctacggc gacggcgcag tgatggcggt tccggcgcac gacgaacgcg
     4801 attttgagtt cgccgccaaa tacaatctgc ctaaaaaaca agtcattgcc gtcggcgaca
     4861 acgcattcga cgcaaaccga tggcaagaat ggtacggcga caaagaaaac ggcgtattgg
     4921 tcaacagcgg cgacttggac ggcttggatt ttcagacggc attcgatgcc gttgccgcca
     4981 agctgcaaag ccaaggcgcg ggcgaaccga aaacccaata ccgcctgcgc gactggggca
     5041 tttcgcgcca acgctactgg ggctgcccga ttcccatcgt ccattgcgaa aaatgcggcg
     5101 acgtccccgt tcctgccgac caactgcccg tcgttttgcc tgaaaacgtt gtgcccgacg
     5161 gcatgggttc gccgctggca aaaatgcccg agttttacga aactgcctgc ccgtgctgtg
     5221 gcggcgcggc gaaacgcgaa accgacacca tggacacctt catggaatcg agctggtatt
     5281 tcttccgcta catgtcgcca aaattttcag acggcatggt cgatcctgcc gccgcgaaat
     5341 actggggcgc ggtcgaccaa tacatcggcg gcatcgaaca cgcgattctg cacctcttgt
     5401 acgcgcgttt cttcaccaaa ctgatgcgcg acgaaggctt ggtcagcgtg gacgaaccgt
     5461 tcgaacgcct gctgacgcaa ggcatggttg tctgcgaaac ctactaccgc gaaaacgaca
     5521 aaggcggcaa agattggatc aaccccgccg atgtcgagct gacgttcgac gacaaaggcc
     5581 gccctgtttt cgccgtcctc aaagccgacg gactgcccgt cgtcatcagc ggcacggaaa
     5641 aaatgtccaa atccaaaaac aacggcgtcg atccgcaaga gctgattaac gcctacggcg
     5701 cggacactgc ccgcctgttc atgatgttcg ccgcaccgcc cgaacagtcc ctcgaatgga
     5761 gcgacagcgg cgtcgaaggc gcacaccgct tcctgcgccg cctgtggcgt accgtttacg
     5821 aatacttgaa gcaaggcgaa gcagtcaaag cgttcgcagg cagccaagac ggtttgtcta
     5881 aagaactcaa agacctgcac cacaaactgc acgcgaccac tgccaaagtc agcgacgact
     5941 acggccgccg ccagcagttc aacaccgcca tcgccgccgt gatggaattg ctcaaccaat
     6001 acgacaaaac cgacaccggc ggcgaacaag gccgagccgt cgcccaagaa gtattggaaa
     6061 ccgccgtacg cctgctgtgg cccatcgtgc cgcacatctg cgaaaccctg tggagcgaat
     6121 tgaacggtgc gaaactatgg gaagcaggct ggccggcagt cgacgaagcc gccctggtca
     6181 aatccgaaat cgaagtgatg gttcaagtca acggcaaact gcgcggcaaa atcactgttg
     6241 ccgccgacgc atccaaagcc gacctcgaag ccgccgcact cgccaccgaa ggcgcggtga
     6301 aattcatgga aggcaaaccg gcgaagaaaa tcatcgtcgt accgggcaga ctggtgaaca
     6361 tcgtcgtcta accgctttta aggtttagcc atacggataa aggccgtctg aaacttggaa
     6421 acagggtttc agacggcctt tttaaggcag atggagttga taagtccaat aacatattgg
     6481 aatggaaagg ttctattgga tttagactca ctctacacac gtccccaaaa tataaatccg
     6541 ttgtattcct cacgatgttt tggcacaatt ccaagccaat caaccacgct tatactctgc
     6601 atcctaatgg cttcaaaacc cttcctaaaa tgggcaggcg gcaaacataa acttgtcccc
     6661 tttatcgaac ataatctacc cactcctaca cgaaaacgcc tgattgaacc cttttgcggt
     6721 tctgccgctt tgtctcttgc attggacttc gaacattatc tgctcaatga tattaacgct
     6781 gacttaatcg gcttattccg tatcctaaaa gaagaaaaat ccggattcat cgactacgcc
     6841 cgctctttct ttatttccga aaacaatagc gattcaagat tctatgaatt gcgggaacaa
     6901 ttcaacttca gcaaaaatct gcacgaacgc tcagcactat ttatttattt gaaccgtcat
     6961 gcttttaacg gtttatgccg ttacaacagc aaaggggtat tcaatgtgcc gttcggacgc
     7021 tacaaatcgc cgtactttcc ccaacaagaa atggaaggtt tcattcagaa atctgacaga
     7081 gttgaattaa tgtgcggaga ttttcaaatg attctatctc agacagacaa taccgatacg
     7141 gtttattgcg atccccctta cgcgccttta agcccaaccg cttcatttac cacttatgcc
     7201 aaagaaagtt tcaatttaga caatcaaatc cgtcttgccc agtcagccca acaaattgcg
     7261 cccgattccc aaggcgtttt gatttcaaat catgatactg aattcacaag ggatatttat
     7321 tcttttgcca ttctgaaaac aattgaagta caacgcaata ttgccgcaaa aggcagcagc
     7381 cgtaaaaaag tcggagaatt attggcaatt tatgattgat tttgacaaac cggctgaaga
     7441 agacgccatt tatcaaagtc gtttgaaaaa aatcgtttca gacgaccttg tcctctacaa
     7501 cgaaaattcc cttaacgtca tgcggaagat attggaaaaa tatccaaacg gctgttttga
     7561 tatgattttc tcagacccgc cttactttct ttccaatgac ggcttcagtt gtcaaaacgg
     7621 acaaatggtt tccgtcaata agggcaactg ggataaatcc aaaggaatgg cggcagattt
     7681 ggaattctac gaagaatggc tccgactgtg ttacgcctta ttaaaaccaa acggcacaat
     7741 ttgggtttgc ggcacattcc ataatattta tttaatcggc tacctgatgc aaactatcgg
     7801 ataccatatt ttgaacaata ttacttggga aaaacccaat cctcccccta atttgtcctg
     7861 ccgttttttt acccattcga cagaaacaat cttatgggca aagaaaaata aaaaagccaa
     7921 acacacgttt cattatgaaa tgatgaaagc acaaaatgat ggcaaacaga tgaaatgtgt
     7981 ttggacattt cctcctccaa acaaagccga aaaaacattc ggcaaacatc cgacacaaaa
     8041 accactcccc ttgcttgaac gctgcatact ctcagcttca aacatcggag atttaatttt
     8101 tgaccctttc atgggcagcg gcacaacagg cgttgccgcc ttaaaacatg gtcggaaatt
     8161 ttgtggttgc gaactggaag aagatttttt tgaattagca aaaaaaaggt tagaaaaatg
     8221 attattggcg gaatcggtgg tgcaaggaca caaacaggac tcagattcga agaacgtaca
     8281 gacttacgaa cgttgtttga agaaattccc gggtacgact taagaaaaac atatgataat
     8341 gcgggttatg aagtttggtt caatggagaa ttgaaggctt attgttttaa aaaatatgag
     8401 ttttaccgat ttttgaaaag accgggatac aatattaatt ggaaagacca tctgtctaaa
     8461 agattactac ccgacaatgg cttatttatc atcatccgtg ataccttatt tattattgag
     8521 atcaaattcc aacaaactcc cggttcagta gatgagaaat tacaaacttg cgattttaag
     8581 agaaaacaat atacaaaatt ggttcactct ttaggttggc gggttgaata tgtctatgtt
     8641 ttgaatgatt ggtttacaaa gccggaatat aaagatgttt tagattatat tatcagtgtt
     8701 aactgccatt accaatttaa cacgattccc ttaaggtggt ttggactgcc tgatggtgaa
     8761 acaaatgaat aaataccata tttaaaacac agccgttcaa ggtcgtctga atatcatttc
     8821 agacgacctt tcaccaatcc ccgccgtttt ccatctttct gctattgtga taaagtagcc
     8881 cgaccttttg ttcaaaatac gcggattccg cgacactgaa tgcagcatct gtcaaagatt
     8941 atttgaaaac ggtcgagtta gacaagtctg ccgacaatgt cgataccaca tccaaaacta
     9001 tccgcagggt ttaggcggta ttccagagta cggtgtctta tgctgatgct gtaaacaatg
     9061 cccgtataga aaatctaaaa cggttgttgc cgaccgttat gccggtttat gagcaaagtg
     9121 tcagaaataa ggggcgcgtt aatatagtgg attaaattta aatcaggaca aggcgacgaa
     9181 gccgcagaca gtacagatag tacggcaagg cgaggcaacg ctgtactggt ttttgttaat
     9241 ccactataaa aaacgtcggc gttaagggaa ggggatcgag aatttgagcc gttgtttcaa
     9301 aatgccgtct gaaatcgttt gagattcaga cggcatttaa acagttctgc gcccgcccgt
     9361 tttgccttca agcccgcgcc gcttaaatcc aatcccccct gcaacgggcg caaaaaaatc
     9421 tccgtgcctc gcggtcgggg atgtttcggg tttcacgccc gtctgcgccg tgccttgctg
     9481 tcgggctatg ccgtctgcac cgccgccgtt tcggcttggt ttgatgcggt cgggcattta
     9541 tgcggctacg ccctgatatt cagttcggcg gtcttgcctg ttttggcagg catattcagc
     9601 agcgcgtcta ttgtgaactt gctgattttg ccgtttgcca agtcggctac gcaatggctt
     9661 cgataccctt gtttttgacg atggtcagca gcttcaacgc cgcgccgctg ggctttttaa
     9721 cgccccgctc ccaagccgaa acgtgatttt ttcccacgtt gagatagatg gcgaaagcgg
     9781 cttgcgatag tgcctccttc tccctgattg ccttgatgtc tccgccgctc aacggtttga
     9841 tttcggtcag gcaggacttg tcaaagccgc gcatagtctt tttgtcgatt gcgccgatgt
     9901 tgtaagcccc ttccatcatt tcatgaatgg cggctaatgc ctcgcttttg tatttcatga
     9961 ttctatctcc gtgataatgc cgtcttcttt caaagccgcc agctctgccc gcgtgtattt
    10021 cagataatat gcggcggctt ttcggtaaac gtccagttct ttatccgaaa tgttttccct
    10081 gtcgttcttg gcaaaggcgt aaacgaaaat gccctatctg cctgtttgaa caatatcagg
    10141 ctgcgatagc cgccgcttct gccttgtcct tgccttgcta tgcgctgctt aatcacaccg
    10201 ccgcctaaat ctgcgtctat cagcccgtta tccgcccgct ctaccgcttc cagcagctcg
    10261 gaatcgttga ttttgtgctt cttggcaaat ttcactatcc attggttttt gaatatccgc
    10321 attgtgtagc cgttgattag tgatacttgg aattatacca gagacagaca acacggcaag
    10381 ctgccttttt tatgccccgc aatttctccg tttatgccgc ctgaaacact ggcggctaac
    10441 ctgattattt tttaatcaat cgcttttaat ggctcaaatt gcgtttttag cgcgtttcgc
    10501 tgtcttccta tgtcccccat atataaccaa gcggtttaac cgccattcct gctcaaaata
    10561 ggcgcggttc cgtgcgtttt ggcttttcat tccgctacgc tcccactgcc aagacggtga
    10621 aaaaccggaa aaccccaaaa gttgttaccg attcgttacc atttgttacc gcatttgtta
    10681 ccaatttttt atctttttct tattttatag tgaattaaat ttaaaccggt acagcgttgg
    10741 ctcgccttgc cgtactattt gtactgtctg cggctcgccg ccttgtcctg atttaaattt
    10801 aattcactat attttcccga caggcggatt tgaagtttct ccacatatcc ggcgcgttcg
    10861 gcgcggctgg tttcggggcg gtgcgtattg agcgacgacc atttccaatg actgcgggct
    10921 ttgttgagtt cgggcgggag tctggcggcg tcccacgggg ctttgcggct gtgcagctca
    10981 atatccgact gtgccgcgtg tccgcgcgtt tgcaggacgt ggagcagatc gagggcgcgg
    11041 gcggcgagca gggtcagggt ttcggggtcg gtgtgcaagg tttggcggcc ggcgagtttg
    11101 tcggaaatgg tgcgggtatt gggcaggatg ccgcccaaaa agccgccgat tgccgtaccc
    11161 aatccgagcg agccgccgag tgtggcgatg tccagcccca agccgatgag tgcgccggtt
    11221 gccgcgcccg tgccggtgcg gatgccgtat tgtttgagca attcgctgtc gaacgggtct
    11281 tggcggaagg cttgcggcat ccagtcgccg ccgtcgattt cgctgtggta gaaacggtag
    11341 agggcaaaca gccgctgctg catctgccgt tcgagttggc gtatttccgc ctgcatggtt
    11401 tgcagcacgg tggcggtatc ctcgttttcg tccacttcct gcctgaaggc ggcggcatca
    11461 attaaaaagt cggcgatttc gcggcgcgct tcgccgtcca gccgctgcca ttcgcgccgg
    11521 cgcatggctg tcaggcggtc aagtgtgctg cgttcgggca acatggtggc gaggttttcc
    11581 cacaggcgta gttcgccttc aaaatcaaag gcgacggtgt cgaaccctgc gaaaacgtgc
    11641 aggtttctcc tcgccagcat ggttgtccac gattcgggag gctgtccgcc ggtaaagttg
    11701 aacacgggca taaccggttt ggcgcaccat gaaaggataa tcaattcatc ccgatatttg
    11761 tcgagaacgg gttcgcgcgc gtcgatgacg tacattgcca tatcgctttg caagacttgc
    11821 cgtaagactt tggcttcctg attgaaatca tggtgcgcgc cgtggctgcc gagaaactgt
    11881 tgcagccgtt cgatgccgtc tgaacgattg tccgtatggt tttccagcca ttccagcacg
    11941 ccgcccgcgt cttcgagtcc gggcgtgtcg tacaggaaaa ccagcgtgtc tgcgccgtcg
    12001 ctgatggcgg cttcttcgac atgacgcgtg gtcgatgggg cgtttctgac ttcgccgaaa
    12061 ccgctgtcgc gcaaaagggt acgcaggagc gaggttttgc cggtgttggt gtgtccgacg
    12121 acggcgaggg aaaggggttg tttgttcatg atgtttttga agaatggatt ttcagacggt
    12181 cttttttcag aatggcggct taacagaaca tttcaagtga gtttattggt ctttcaaacg
    12241 gccttcctgc gccgccctgt caggctcaag ccacgccgcg ccgcattcgg tcagcgcgtt
    12301 acgccaatgt tccagctttt ccgaaaggtc gtctgaaagc ccctgttccg ccaaaagctg
    12361 caccaccgcg ccgccctgcg ccgcttccga aagtcggacg atctgccgca acacgccgcg
    12421 gtcgggcaca gtttgggcgc gcacgccgat aagcagttgc gccggtttct gcttcagctc
    12481 tgtctccagc gcggcaacct gttcccgatt ggcggcaacg cccttatcca gccattcctg
    12541 cgccagcctg ccctcgaacc attcgccgtc ctgccattcg gtctccagca tgaccgccca
    12601 tttcggcgca tcgttcaaga cgattttcgg cgaaacggcg gacacggttt cccgacgcgt
    12661 atccgcatcg gtgattttgt tctgccagcg gcggatgacc gcctgataat agggtttttc
    12721 caaatccaat ccgttttcgc ttgttttcaa aaggattttg cataccgccc aagccaagag
    12781 gcgcggcagg atgccgtagc aggcgatact gccgaccagc agccccgacc aagcccgcgc
    12841 atcggcaata ttgccgttca gacggccttc gatgaccgcc cgcgcatcag gcacgggaaa
    12901 acccagtttc gcaggcagcc atgccaacat ttccaccagc cgtaccgaag acgaatcgcc
    12961 caacagcgtg ctttcccagt tgaacgtata ttgccgcacc aaaagcagca acaataccga
    13021 caccagcatt ccgagcagcg tgcagagcca caggctgtgc gacgttgcgc ctattttcca
    13081 acgtaccgaa ggttgccgcc actcgtccgc atacagccgc aacaccgcct gatttacagg
    13141 gtctttgccc cgaaaccacg tcgccggact gctgaaaaaa cgccccactt tcacgcgcag
    13201 gaacaacatt gccaaccata ctgccagcat cagcgtattc atgcccaaca cgcccgccaa
    13261 aaccaaaaag aaattcagac cctgattgtc cattagaaga taagtgcctg aaaaaccggt
    13321 aaaaaacgca aacgtcgccg ccgccaccca caaccagaac gaccccgcac gcacacgttc
    13381 caacgtctcc cgcagcatac ggttcctgtc gatcatctcc gcccgacgga tgattttttc
    13441 ctccgtactg ccgtccacgc ggcgcaaagc ctccgtcgcc tgcacgggat cgccgctgaa
    13501 aataaaaccg ccttcgtcca aaatacggat cagctcaacc agttttcggg atggattcaa
    13561 cataaaatgc cgtctgaaaa taaaaaacag attttaacac acgcattttc aagaatattc
    13621 acagtgtagg caaagagtaa atctcacaca gaagcaaaag tatcggcgta aactgactgc
    13681 ctctactttc ccgaaagatt gtgcgatgta tacaggcgaa cgcttcaata cttacagcca
    13741 tttgagcggt ttgattctgg cggcggcagg tttggcgctg atgctgctga aaaccatagg
    13801 acacggggac ggctaccgta tcttcagcgt atcggtttac ggcatcagcc ttcttctgct
    13861 ctatttgagt tcctcgctgt accacggaat tgcagccgga aaactgaaaa gcattttgaa
    13921 aaaaaccgac cactgcatga tttatgtgct gattgccgga agctacacac cgtttgcact
    13981 ggtttctttg agaaacgggc cgggctggac ggtattttca ctgtcctggc tgctggcggc
    14041 tgcaggaatc gcacaagaac tcaccatcgg acggaaaagc gaaaaacgtc tgctgtctat
    14101 tgtgatttat gtcgtcatgg gttggatggt cttggcggta atgaaatccc tgacagcctc
    14161 actcccgtcg gcaggactgg cttggctggc ggcaggcggt atgctgtaca gtgtcggcat
    14221 ttactggttt gtaaacgatg aaaaaatccg acacgggcac ggaatctggc atctgttcgt
    14281 attgggcggc agcatcaccc aatttgtcag cgtgtacggt tacgtaatct gaatgccgtc
    14341 tgaaaagcaa aacctcccgt tcctgaagat tgggaggttt tctgtttgcc ggacatcagc
    14401 ccttgtcgtg gaactcgtgg aattcatact gataggacaa atcccgaccc gcttttttct
    14461 gtgccaaata atcatcataa atggcgcgga tttccttacg caacaaaaac agggctatca
    14521 ggttggggat aaccataaaa ccgttgaaca tatccgacag actccaaacc aaatcgactt
    14581 tgccgagcgt acccaaaaca atggcaagca gaaccaatgc gcgatagatg cccaagtgtc
    14641 ttcccctgaa aagaaaacgg atattggact cgccgaaata ataccaaccg atgatggtgg
    14701 tgaaggcaaa gaaggtcaga cacacggcaa gcaattgcga accgaagccc ggaaatgcct
    14761 tgttaaaggc aaattgagta accgccgcgc cctgttcgcc cgaaaggttg gcatcggtca
    14821 gcaggataat caatgccgta gccgtacata ccaaaatcgt atcgataaac acaccgacaa
    14881 atgccgccat accttgctgc acagggtgct tcacatccgc agtcgcgtgg gcgtgcggag
    14941 tcgaacccat acctgcttcg ttggaaaaca gaccgcgcgc cacgccgaaa cgtatcgctt
    15001 cgcgcatacc gatacccgca gcaccgccca aaacggcttc gggattgaag gcggcggtaa
    15061 agatgtggtt gaacatcggc acaatatggt cggaaaattc aaacaggata acgacggcgc
    15121 acaaaatata aacaaccgcc ataaacggca cgacaaattg ggcaatattg gcaatacggt
    15181 tcacgccgcc aatcacaacc atgcccgcaa ggacggcaag cacaataccg actgccaaag
    15241 aaggcacatc aaatgcaatg gtaacggcag aagcaatgga gtttgcctgt gtcgcattac
    15301 cgataaagcc caatgcgata atcaacgcaa tggaaaagaa accggacaaa aaacgcgccg
    15361 cgcccctgcc gattttcgga gtcagaccgt gggtgatgta gaacgccggc ccgccgatgt
    15421 atttgccgtg gctgacgacg cggtatttct gcgccagcag tgcctccgca aaaatcgtgg
    15481 acatccccaa aacggcagaa acccacatcc aaaaaatcgc gcccggcccg cctgcggtga
    15541 tggcggtcgc cacgccggcg acgttgcccg taccgatttg cgcggatatg gcaaccgcca
    15601 acgcctgaaa ctgcgataaa gacttatcgt ctttatcgcc tttggcaaac aagccgccga
    15661 atacagattt gaatcccgca cccagcttgg taatctgcgg cgcaccgaga tacagcgtaa
    15721 aaaacaggcc gatacccaaa agcgcgtaaa tcagcaggta gtcccaaagg aaccgattga
    15781 ctgtacccac cagaacagac aatatatttt ccataaaata aaccttatct tacaattaaa
    15841 atgactgcct tccaaaagac attccaataa ggaaacacgg cgagcagacc gtatttgccg
    15901 caacagatgc cttaaattgt caacaatcgg ggagaagctg cgccatcata ccgtaaaata
    15961 tcgttaatta aaacatttct ttatttttaa gcggaaagcg gaggaaatcg ctttcagacg
    16021 gcatcgacaa cggcacggca taaaacagga tattttgggt acttgcaact tatgttaaaa
    16081 tgccgaccgt aaaaaatctg acaaaaacag attaattatt tgaaataaga aaggaaattt
    16141 atggcaggtc atagcaagtg ggcgaatatc cagcataaaa aagcccgtca ggatgccaaa
    16201 cgcggcaaaa tcttcacccg tttaatcaaa gaaatcaccg ttgcggcgcg tatgggcggc
    16261 ggcgatcccg gcgcaaatcc gcgcctgcgc ctggctttgg aaaaagcagc cgaaaacaat
    16321 atgcccaaag acaatgtgca acgcgccatc gacaaaggca cgggcaactt ggaaggcgtg
    16381 gaatacatcg aattgcgcta cgaaggctac ggcatcggcg gcgcggcttt gatggtggac
    16441 tgcctgaccg acaacaaaac ccgcaccgtt gcggacgtac gccacgcgtt taccaaaaac
    16501 ggcggcaact tgggtaccga cggctgcgtg gcgttcaact tcgtgcatca gggctatttg
    16561 gtattcgaac ccggcgttga cgaagacgcg ctgatggaag cggctttgga agccggtgcg
    16621 gaagacgtgg ttaccaacga cgacggttcc atcgaagtca ttaccgcgcc aaacgattgg
    16681 gcgggcgtaa aatccgcttt ggaggcggca ggttacaaat ccgttgacgg cgacgttacg
    16741 atgcgcgccc aaaacgaaac cgaactctcc ggcgacgatg ccgtcaaaat gcaaaaactg
    16801 attgacgcgc tggaagactt ggacgacgtg caagacgttt acacttccgc cgtattgaat
    16861 ttggactgat acgcagcaca gcagacatac aataaaatgc cgtctgaacc tttcagacgg
    16921 cattgattta tttagccctt gcccacgccc accaaaccgt caggacaacc gccagaaaat
    16981 acgccgcgct ccaaacaggc aaagcaaccc ctaacagata atccggttcg gcacaatttc
    17041 cgaacccgcg cacgacaggc tcgaaccaat caaacaaaga ccagcccttc aagcggaacg
    17101 tccacggcgc accgcacgaa ggagcggttc ccggcggcag cgactgcaac cacaactgat
    17161 atgccgcaac agaaataccc gtaacggccg gaatgctgat aaagacagca ccgaacaaac
    17221 cgcccgccct tcttcttggt ctgcacatca ggacaattgc cgtacacaat gcggttgcca
    17281 aaacgcataa ccgctgactg atacacaaaa cgcaaggctc catacccaaa acatactgtg
    17341 ccgccaaaga accggcaaat gcacagaccg aaacggcaaa cagcagccaa acggcttttc
    17401 taaataacgg ggtcattttc tcaacacacc aatcaaaata ccgatatgcc gattttgctg
    17461 gatatatccc gagatggcaa gggacgaatc gacaccggcg caggtgcgga cgatttcggt
    17521 tttcccgata tacacaagac ctgacaaggg acaaaacggc gatttgcccg cacaatgccc
    17581 gcaaaaaaat acatccggag gatttgaatt tcggcaaatt tagcgaatca aaagtttatt
    17641 tcaatgaaat tatatgattt ttttgaataa gcggattgac aggtttttga aggaatttgt
    17701 taccggatag ccatcgggca agttttttgc aaaatttgaa tcggtcgggt aaattttcaa
    17761 aaaataattg acagcggata agaaacggcg gataattccc gccgtcgagt tgcttgatgc
    17821 agcttgattt ttctcctcta tttctccttt gtagacttgg cacacattca actggatgtg
    17881 tgcatttttt atctccgctt tttttgaaat ttaattactt ttattgtttg aaattccatt
    17941 ctttaagaaa tttaacaaga aaaacgcttg ctttttgacc ggaaaagctg cataattcgt
    18001 tccgttagct ggttcgagta gtcagttaat agtttctcct atatttctcc tttgtagact
    18061 tggcacacat tctattgaat gtgtgcattt ttttatctga agcaacaagc ctctgtgcgt
    18121 gatgttgtta tgtttcattt aggtgtcaaa ccgcataccc ggtctgaaat attcaatcca
    18181 aatccaaaac cggattttct ttgacctcct ccatcacaac ataactccta ctctccgaag
    18241 cggcaggcag ttgcaatagg atattgccta gcatatcccg ataggcagac atatcgggca
    18301 aacgtacttt aatcagatag tcgtattcgc ccgacaccaa gtggcattcc ataatttgcg
    18361 gaattttcag cacttctttt ttgaaatctt cgaaaatatt gcccgatttg gattgcagct
    18421 tcagctcgac aaaaaccaat agcggtttgc ccaacagatg gggattgagg tgggcgtgat
    18481 agccggaaat ataatgttcc cgctccaaac ggcgcaccct ctctgtaacg ggcgtggtgg
    18541 acaagcctac cttctcggca agctccgtca tcgggatgcg ggcattctgt tggaggatct
    18601 taagaatgcg gaaatcgatt ttatctagtt ctttcatttg gattgccttg tatttattat
    18661 tgattttaac aaatagag
//
LOCUS       DAWGBY010000030        17661 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.030, whole genome shotgun sequence.
ACCESSION   DAWGBY010000030 DAWGBY010000000
VERSION     DAWGBY010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17661
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.030"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(109..810)
                     /locus_tag="WHG62_000887"
     CDS             complement(109..810)
                     /locus_tag="WHG62_000887"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ1725019.1"
                     /translation="MSLKTVTVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AANSAKMVAEIVKSL"
     gene            996..2108
                     /locus_tag="WHG62_000888"
     CDS             996..2108
                     /locus_tag="WHG62_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ1725020.1"
                     /translation="MTAKEELFAWLRHMNQNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            2142..3119
                     /locus_tag="WHG62_000889"
     CDS             2142..3119
                     /locus_tag="WHG62_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ1725021.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFVAKA
                     LLCETPAQGCKPCGECMSCHLFGQGSHPDFYEITPLADEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHTADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TVSGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            3123..3473
                     /locus_tag="WHG62_000890"
     CDS             3123..3473
                     /locus_tag="WHG62_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEZ1725022.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTDDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGSTISGSRPTFTM"
     gene            3478..4257
                     /locus_tag="WHG62_000891"
     CDS             3478..4257
                     /locus_tag="WHG62_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ1725023.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRAV"
     gene            4283..4497
                     /locus_tag="WHG62_000892"
                     /pseudo
     CDS             4283..4497
                     /locus_tag="WHG62_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
     gene            4598..4909
                     /gene="grxD"
                     /locus_tag="WHG62_000893"
     CDS             4598..4909
                     /gene="grxD"
                     /locus_tag="WHG62_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ1725024.1"
                     /translation="MASIHDQIKEIVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            5015..5641
                     /gene="upp"
                     /locus_tag="WHG62_000894"
     CDS             5015..5641
                     /gene="upp"
                     /locus_tag="WHG62_000894"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ1725025.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            5664..5984
                     /locus_tag="WHG62_000895"
     CDS             5664..5984
                     /locus_tag="WHG62_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ1725026.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            6235..6657
                     /locus_tag="WHG62_000896"
     CDS             6235..6657
                     /locus_tag="WHG62_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725027.1"
                     /translation="MKKMFLSAVLLLSAAAQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRRATMKFQNGEFMYTVWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPQTAQANFNDADFSR"
     gene            6675..7436
                     /locus_tag="WHG62_000897"
     CDS             6675..7436
                     /locus_tag="WHG62_000897"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ1725028.1"
                     /translation="METVKPIMLIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKMHISVGQGSRRALERCLGRTV
                     IAPEDGNDSEAVLRLTVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            7451..8785
                     /locus_tag="WHG62_000898"
     CDS             7451..8785
                     /locus_tag="WHG62_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ1725029.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDSGVKANGEQILMTQKAYRELTKGRADWLVDETDTILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVFGLPLILDGVLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDVRTALMQRNSEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQSVPEKAGRSPSAKGERA"
     gene            8782..9999
                     /locus_tag="WHG62_000899"
     CDS             8782..9999
                     /locus_tag="WHG62_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ1725030.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSERKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLYAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            10074..11138
                     /locus_tag="WHG62_000900"
     CDS             10074..11138
                     /locus_tag="WHG62_000900"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ1725031.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEDDIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEAARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            11316..12695
                     /gene="radA"
                     /locus_tag="WHG62_000901"
     CDS             11316..12695
                     /gene="radA"
                     /locus_tag="WHG62_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ1725032.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(12971..13450)
                     /locus_tag="WHG62_000902"
     CDS             complement(12971..13450)
                     /locus_tag="WHG62_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ1725033.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMNIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(13575..13934)
                     /locus_tag="WHG62_000903"
     CDS             complement(13575..13934)
                     /locus_tag="WHG62_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ1725034.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLTKGMK"
     gene            complement(13973..17587)
                     /gene="recB"
                     /locus_tag="WHG62_000904"
     CDS             complement(13973..17587)
                     /gene="recB"
                     /locus_tag="WHG62_000904"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ1725035.1"
                     /translation="MSAPIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFRRD
                     LDALEEAEEATMIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAECRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPHRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNGGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICVIDYKSNHLGADASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         4030 a         4613 c         5041 g         3977 t
ORIGIN      
        1 aaatgccgtc tgaacaaaca gcggtacgtc caaatatcgg gcgcaacgtg gaaatagccc
       61 gatattctaa cggaaaaccg ctgttttggc ataagtttga taaaggtctt ataaagattt
      121 gacgatttct gccaccattt ttgcggaatt tgccgccgcc gttttcaaga actcgtcaaa
      181 gctgatgtct gccttttcgt ctgccgaatc ggaaaccgcg cggatgatga cgaaaggcgt
      241 ttccaactga tgacaggttt gggcgattgc cgccgcttcc atttctaccg ccttaacttc
      301 ggggaagtgc ttgcggattt ccgccacgcc ttcgctgctg tggacgaagc ggtcgccgct
      361 gacaatcagc ccttgttcta ccgccgcgcc ttcaaacact tccgccgcct gttttgcttt
      421 gccgaccaag aggccgtctg aaacaaatac ggcgggcagt tgcggcactt gtccccaaac
      481 atagccgaat gcggttacat cgacatcgtg gtgcgcgatt tctgtgccga ccacgacatc
      541 gccgactttc aaacccttgc ccaaaccgcc cgcgctgccg gtgttgatga cgcagtccgg
      601 tgcgaattga tggataagcc aagctgttgc aaccgccgcg ttgaccttgc cgatgccgct
      661 caatgcaagc accatgcgtt ttcccgctaa ttcgccttca taggcggcaa acttgccgaa
      721 agagacggct ttgacatttt ccatcatctc gcgcaaaagc tcgatttctt gttccattgc
      781 gccgataacg gttactgttt tcaaagacat attgctgacc tgctgtgaat ttcggataga
      841 atgcctgatt atacacgcta acacggcagg attgagtgga ggtggtttgt ccgtgccgtc
      901 tgaaacggtt tcagacggca cggcgggttt ttggtagaat gggaaggtac agattgtttg
      961 aagattaggg gacgaggatg tttaccgatg aaaatatgac cgcaaaggaa gaactgttcg
     1021 catggctgcg ccatatgaac caaaacaaag gttccgacct gttcgtgacg acccatttcc
     1081 cgcccgcgat gaagttggac ggcaaaatca cccgcatcac ggacgagccg ctgacggcgg
     1141 aaaaatgtat ggaaatcgcc ttttcgatta tgagtgcgaa gcaggcggaa gaattttcat
     1201 cgaccaacga gtgcaacttc gccatcagcc tgccggacac cagccgcttc cgcgtcaatg
     1261 cgatgataca gcgcggcgcg acggcgttgg tattccgtgc gattaccagc aagattccca
     1321 agtttgaaag cctgaacctg ccgccggtct tgaaggatgt cgcgctgaaa aaacgcgggc
     1381 tggttatttt tgtcggcggc accggctcgg gcaaatcgac ttcgcttgcc tcgcttatcg
     1441 actaccgcaa tgaaaattcg ttcggacaca tcatcaccat cgaagacccg atcgagtttg
     1501 tccacgaaca caaaaactgc atcatcaccc agcgcgaggt cggcgtggat acggaaaact
     1561 ggatggcggc gttgaaaaac acgctgcgtc aggcgccgga tgtgattctg atcggcgaaa
     1621 tccgcgaccg cgaaacaatg gactacgcca ttgcctttgc cgaaacgggg catttgtgta
     1681 tggcgacgct gcacgccaac agcaccaatc aggcactcga ccgcatcatc aactttttcc
     1741 ccgaggagcg gcgcgaacaa ttgctgacgg atttgtcgct caaccttcag gcgtttattt
     1801 cgcaacgcct cgttccgcga gacggcggca agggcagggt ggcggcagtc gaggtgctgc
     1861 tcaattcgcc cctgatttcg gagttgattc acaacggcaa catccatgaa atcaaagaag
     1921 tgatgaaaaa atccactacc ctgggtatgc agaccttcga ccaacacctt taccaattgt
     1981 atgaaaaagg cgatatttcc ctgcaagaag cattgaaaaa tgccgattcc gcacacgatt
     2041 tgcgtttggc ggtacagttg cgcagccgcc gcgcgcaaag ttccagcccc gatttggaac
     2101 tgctctgatg gcggtatgga tttccggacg gatggtttga aatgatttat ccgtggcata
     2161 atgagcaatg gcggcagatt gcggaacatt gggagcgtcg tcccaatgca tggctgtttg
     2221 ccggcaaaaa agatacgggg aaaactacat ttgcccgctt tgtggcgaag gcactgttgt
     2281 gcgaaacccc tgcacagggc tgcaaaccct gtggcgaatg tatgtcctgc catctgtttg
     2341 gacagggaag ccatcccgat ttttacgaaa tcacgcctct ggcggacgaa cccgaaaacg
     2401 gacgcaaact gttgcagatc aaaatcgatg ccgtcaggga aatcatcgat aatgtgtacc
     2461 tgacttcggt acggggcggt ttgcgcgtga tcctgattca tcctgcggaa agtatgaatg
     2521 tccaagccgc caacagtttg ttgaaagtgt tggaagagcc gccgccacaa gtggtctttt
     2581 tgctggtcag ccacacggcg gacaaggttt taccgaccat taaaagccgc tgccggaaga
     2641 tggttttgcc cgcgccttcc catgaagagg cattggcata tctgcgtgaa aggggtgtgg
     2701 cggaacctga ggaacgtctg gctttccatt ccggagcacc gctgtttgat gaggcggacg
     2761 gtgtccgtgc gttgcggatt aaactgttgg atattttggc agaaccaagg ttgttgaaga
     2821 ttttggatta cgccgcgctt ttcgataagg agaaacttcc gctcgacgta tttgtcgggt
     2881 ggatgcagaa gtggctggtc gatttgggat tgtgcctgca acacatgaaa cccgtctatt
     2941 atcccgctta tgaagacagg ctgcttcaga cggtatccgg tttccgcccg cgcaatgtat
     3001 ttgcggcgga ggatatgctc aaacagcttg ccccctacgg gtttcatact ttaaatgtta
     3061 aaatgcagat cgagcatctg ctcatcaact atttggaatt gaagaaagag aacgggtgaa
     3121 ttatgtcaga cggacaaaat attccggcaa aaatgatgtc gttgcagctg aaagacatga
     3181 atctgctgta cagctcctat atgccgtttt tggagcatgg cggtctgttt gtgcagaccg
     3241 acgacgtatt ttccatcggg gacgatattc tgcttgccgt agaaatcctc aacttcccca
     3301 aactgttcct gccgaccaag gtcgcctgga ttaatcctgc gcgtacttcc tccaaaccca
     3361 aaggggtggg gctggcattc acaaaacacg aaaactgcct gaaagtcaaa gaccagatcg
     3421 aagtcgaact gggcagcaca atcagcggca gcagacctac gtttaccatg taacgccatg
     3481 catatcatcg attcgcactg ccacctcaat tttgaaggtt tgaaagaacg cctgcccgaa
     3541 gttttgtcca acatggaagc aaacggcgtg gggcaggcgc tcgccatcag cgtcagcagg
     3601 gaaagttttg ccgaagtatc cgctatcgcc gaagtttatg aacatattta ctgcacaata
     3661 ggcgtacatc ccgacagcaa ggaagccgaa gaattttcta ttgcggaaat ggttgctgca
     3721 gccgcccatc cgaaagtggt cggcattggc gagacgggct tggattatta ctggtgcaaa
     3781 ggcgatttgt cctggcaaca caaacgcttt gcagaccaca tcgaagcagc caatcaaacc
     3841 ggactgcccg ttatcgtcca tacgcgtgat gcggcggcgg acaccttgtc tatcctgaaa
     3901 gaatgccggg ttaattcggg cgttatccac tgtttttccg aagacatcgg ttttgcccgt
     3961 gcagcaatgg atttggggct ttatatttct ttctcgggaa tcgttacctt taaaaacgca
     4021 cccttggttc aggaggcggc aaaatacgtt ccggacgacc gcattttggt ggaaaccgat
     4081 gcgccgttcc tcgcccccgt tcccaaacgc ggcaggcaga acgaaccggc ttttgtgcgc
     4141 cataccgccg aacatatcgc caaattgcgg aaccaaacat tggaacaggt tgcggcatat
     4201 acgacggaaa acttttaccg gctgtttaaa aaagtacccg atatgcgggc cgtctgaccc
     4261 tgtaccgacg ataaggaaaa ccatgaaggc aattcatccg tatgcatgtc cgcgctgctg
     4321 ccggctgcct gccaacacgt ttcggacagg catggcaaat tccgcttcca aattctgcat
     4381 tgccaaaggc ggcagacggg aagcaaaaaa gacgaaagcg gcggcggata tgccctgtgc
     4441 catttgccgg acagcaggat tgtcgaggag tgggaatatt tccgttcaca acattgatac
     4501 tgcgcgatat acggcaaata ttgtgggaag tttccgcttt tgcgtataat gcgccctacc
     4561 tgacaaattt tgtcaacttt atcaaaagga ataagcgatg gcttccatcc acgaccaaat
     4621 taaagaaata gtaacgacac accgcgtcgt attgtttatg aaaggtacga agcagtttcc
     4681 gcaatgcggt ttctcttccc gcgccgtgca aatcctgaac gcggcgggct gcaccgatta
     4741 cgttaccgtc aacgtattgg aaaatcccga agtacgccaa ggcattaagg aatacagcga
     4801 ttggccgacc atcccccaac tttatgtgaa cggcgagttt gtcggcggtt cggacatcct
     4861 gatggaaatg tatgaggcag gcgagctgca agagctgctg aaagcctgat ggattcggca
     4921 atgccgtctg aacgtgtttc agacggcatt ttcttttccg gcaaatcaaa aaaaagtata
     4981 atggcgcgtc tcaaaatcac actggaacac cgcgatgaac gttaatgtta tcaaccatcc
     5041 gctcgtccgc cacaaattaa ccctgatgag ggaggcggat tgcagcacct acaaattccg
     5101 gacgcttgcc atcgagctgg cgcgcctgat ggcatacgag gcaagccgtg attttgaaat
     5161 cgaaaaatac cttatcgacg gatggtgcgg tcagattgaa ggcgaccgca tcaagggcaa
     5221 aacattgacc gtcgttccca tactgcgtgc aggtttgggt atgcttgacg gcgtactcga
     5281 cctgattccg actgccaaaa tcagtgtagt cggactgcag cgcgacgagg aaacgctgaa
     5341 acccgtttcc tacttcgaga aattcgtgga cagcatggac gaacgtcctg ccctgattat
     5401 cgacccgatg ctggcgacgg gcggttcgat ggtggcaact atcgacctgt tgaaagccaa
     5461 gggctgcaaa aacatcaagg cactggtgct ggttgccgcg cccgagggtg tgaaggcggt
     5521 caacgacgcg catcccgacg ttacgattta caccgccgcg ctcgacagcc acttgaacga
     5581 gaacggctac atcatccccg gcttgggcga tgcgggcgac aagattttcg gcacgcgcta
     5641 actgactgat tttcggattt gatatgaatt tccaagacta tctcgccaca tttccttcaa
     5701 tcgaccatct aggcggtttg gacgttcagg atgccgacgg caaaacggtt caccacattc
     5761 ctgccgttca gggtaagctc ggttcgctca agctgtacaa tgctttggca gaacgttttg
     5821 acggaaaatt ggacaaagaa gcggcagaac agggtttgat atggtttgcc gaacacgttg
     5881 ccgacgcgcg cgcccatccc ggcaagcatc ccaatatcga cctgcttgaa aaagttgtgc
     5941 aaagcggcga aaccttgctg ctcaagccgc ttgccgcgca ataattttcg accatgccgt
     6001 ctgaaatccg tttcagacgg cattttgtcg gaaagaagac cgtaaaacgg gcattttctt
     6061 ttctatttca ggatacgggc aatgatgttt caacacacag gacgacacat aaagcgttgc
     6121 cctatgtgtt gccctaattt ggaaggggtt acacccctct caaataacat ctgatgctgc
     6181 tgccacgaag ggcggatgtc caaatggcgg agtttcaacc attaaggaaa tacgatgaaa
     6241 aaaatgttcc tttctgctgt attgcttctg tcggctgccg cccaaacggt gtgggcggat
     6301 acggtgtttt cctgtaaaac ggacaacaac aaatatatag aagttcaaaa aatcaaccgc
     6361 aatctttacg aatattcgtt cggcagtgcg gcaaaaaaag aaattgccat acgcaacagc
     6421 aaagctgacc tgttggggcg ttccgacagg tggcaaggca tgggcagcgg acgccgggca
     6481 acgatgaaat tccaaaacgg cgaatttatg tacaccgtat ggacgggctt cgattccgtg
     6541 actcatacgg aaagcagcgg tgttgttgtg gagcgtaggg gcaaggaagt cgcacgggtt
     6601 ggctgtacgc cgcaaaccgc gcaggcgaat ttcaacgatg ctgatttttc ccggtaatcg
     6661 gggcggataa ggcgatggaa acagtgaaac ccatcatgct gattgtccga ccgtcgggca
     6721 gggcgaagga cgatgtggaa acctgccgtc gtgccggatg gcaggcggaa gtgttgagcc
     6781 cgattgaaat cgaagcagat gctgccggac tggaactttt gtccgaacaa tatgcccgtg
     6841 cggatgccgt gttttgggtc agtccgaccg ccgttgaaac cgccgtcccg taccttaacc
     6901 tttcagacgg cataaagatg cacatttccg tagggcaggg cagccgccgt gcattggaac
     6961 gctgtttggg cagaacggtc atcgcgcccg aagacggcaa cgacagcgag gcggttttgc
     7021 gcctgacggt ttggaacagt ctgcccgaag gtgcgcgcgt attgtttgtg cgcggacacg
     7081 gcgggcggga ttttctgatg aatgccttgc aggagaaagg ttttcggacg gaggtggcag
     7141 aagtctattt cagacggcat aaacctttga actttcaaaa tttccaaacc gaaaatattg
     7201 ccgccgccta tattacgtcc acagaactcg tgcgcttgct gttcggacag cttccgccgc
     7261 aattttcccg attcttcaaa tccttgctat actttaccca tcatccgcgc attgcggagg
     7321 cattgaagcg cgaaggcgtg tgttcggtcg aaaccgtccc tacgctggaa gccgcgcttt
     7381 cccattcttc catttccgtt tcagacggca tggtctttcc cggaacctca aattaataag
     7441 gagcaaaacg gtgggcgaac ctgaaaacaa atcatccgaa cccgtacgcg agatacaggc
     7501 atcaaaagaa atgccgtctg aaacctcttc cccacgcaaa gaaaacgaaa cagaagtaca
     7561 cattcctgcc gctcctttta tcgtcaaaca gtccggcagc aacgctttgg cagtctgcgc
     7621 cctggtattg gcggcattgg gtttgggtac aagtggtttt ttgtttgtcc aaggacagaa
     7681 tgtcttgaaa aaccaagagc tggcattcaa ccaaaaaatc gacaaagccg ctttgggcga
     7741 gtcggaaaac gccgccctgt tgaaagacaa cctcaaccgg caagccgcca tacaatcaga
     7801 gctcgaccgt ttggacagcg gtgtcaaagc caacggcgaa cagattctga tgacgcaaaa
     7861 agcctatcgc gagctgacta aagggcgtgc cgattggctg gtggacgaaa ccgataccat
     7921 actcaatttg gcagcgcaac agctggtgtt gaccggcaat atccaaacgg cagtcggcgt
     7981 gttggagcat atcgacagcc gcctgtcccg tttcgatcag gcagagcttc tgccgatcaa
     8041 acaggcagtc agcagcgact tggcggaact gaaaaaccgt ccctatgtcg atatttccgg
     8101 cacggcattg cgcctcgaca ggctggaaac cgccgtattc ggactgccgc tgattttgga
     8161 cggcgtattg aaaccgggcg tacaggtgaa gaacgaagcc gcttccgctt catggtggca
     8221 gaacgtatgg gaaaaatccc tcggcacatt gaaggggctg gtcgaaatcc gccgtttgga
     8281 aaacaacgat gccatgctga tttctcccga acaggcatat tttgtgcgtg aaaacctgcg
     8341 ccttcgcctt ttggatgtgc gcactgcatt aatgcagcgc aacagcgaag tctatcaggg
     8401 cgatttgaac aatgccgaag ccgccgtcag acagtatttc gatgccaagt ctcccgccac
     8461 gcagtcgtgg ctgaaagaac tggcggaatt gaaggcgttg gatgtgcgca tgactgcgga
     8521 tgatggtttg aaaaacagcc taaatgccgt ccgcgcctat cgcgacggta cgcgcatgac
     8581 ggcggcggaa aatcaagaag cagaacaggc ggcttccgaa ccggcaaacg aaaacacagc
     8641 ttccgaaccg gctgccgcat cggatgtgaa gaccatagaa gcaccgtccc tgccttcgga
     8701 acgcaaaccg gaacagcctg caaaaaaaca gtccgtgccg gaaaaggcag ggcgttcgcc
     8761 gtccgctaaa ggagaacgcg catgaaaacg gtagtctgga ttgtcgtcct gtttgccgcc
     8821 gccgtcggac tggcgctggc ttcgggcatt tacaccggcg acgtgtatat cgtactcgga
     8881 cagaccatgc tcagaatcaa cctgcacgct tttgtgttag gttcgctgat tgccgtcgtg
     8941 gtgtggtatt tcctgtttaa attcattatc ggcgtattca atatccccga aaagatgcag
     9001 cgtttcggtt cggagcgtaa aggccgcaag gccgcgcttg ccttgaacaa ggcgggtttg
     9061 gcgtattttg aagggcgttt tgaaaaggcg gaacttgaag cctcgcgcgt gttgggcaac
     9121 aaagaggcgg gcgacaaccg gactttggca ttgatgctgg gtgcgcacgc cgccggacag
     9181 atggaaaaca tcgagctgcg cgaccgttat cttgcggaaa tcgccaaact gccggaaaaa
     9241 cagcagcttt cccgttatct tttgttggcg gaatcggcgt tgaaccggcg cgattacgaa
     9301 gcggcggaag ccaatcttta tgcggcggcg aagatgaatg ccaaccttac gcgcctcgtg
     9361 cgtctgcaac ttcgttacgc tttcgacagg ggcgacgcgt tgcaggttct ggcaaaaacc
     9421 gaaaaacttt ccaaggcggg cgcgttgggc aaatcggaaa tggaacggta tcaaaattgg
     9481 gcataccgcc gccagctggc ggatgctgcc gatgccgccg ctttgaaaac ctgcctgaag
     9541 cggattcccg acagcctcaa aaacggggaa ttgagcgtat cggttgcgga aaagtacgaa
     9601 cgtttgggac tgtatgccga tgcggtcaaa tgggtcaaac agcattatcc gcacaaccgc
     9661 cgacccgaac ttttggaagc ctttgtcgaa agcgtgcgct ttttgggcga acgcgatcag
     9721 cagaaagcca tcgattttgc cgatgcttgg ctgaaagaac agcccgataa tgcgcttctg
     9781 ctgatgtatc tcggtcggct cgcctacggc cgcaaacttt ggggcaaggc aaaaggctac
     9841 cttgaagcga gcattgcatt aaagccgagt atttccgcgc gtttggttct ggcaaaggtt
     9901 tttgacgaaa ccggagaacc gcagaaggcg gaggcgcagc gcaacttggt tttggcaagc
     9961 gttgccgagg aaaaccgacc ttccgccgaa acccattgaa accttcagac ggcatcgttg
    10021 aaatgccgtc tgaaaaccat ttcacttgac aaacagactg acagaaaacc cgtatgactc
    10081 ttttaaaaaa cgataccttc ctccgcgccc tgcttaaaca gcccgtcgaa tacacgccga
    10141 tttggatgat gcgtcaggcg gggcgttatc tgcccgaata caaagccaca cgcgcgaaag
    10201 cgggcagctt cctcgatttg tgtaaaaaca ccgaattggc gaccgaagtt accatccagc
    10261 ccttagaacg cttcgatttg gacgcggcga ttctgttttc cgacatcctg accgtccccg
    10321 acgcaatggg cttgggactg tattttgccg aaggcgaagg cccgaaattc aaacgcgccc
    10381 tgcaacacga ggacgacatt gccaaattgc acgtccccga tatggaaaaa ctgcaatacg
    10441 tctttgatgc cgtcagctcc atccgtaaag cactggacgg ccgcgtaccg cttatcggct
    10501 tctccggcag cccgttcacg ctcgcctgtt atatggtcga aggcggcggc agcaaagaat
    10561 tccgcaccat caaaaccatg atgtactcgc gccctgattt gctgcacaaa atcctcgata
    10621 ccaacgccca agccgttacc gcctacctca acgcccaaat cgacgcgggc gcgcaggcgg
    10681 tgcagatttt cgacacttgg ggcggcgtgt tgagcgacgc ggcgtttaaa gaattcagcc
    10741 tcaaatacat ccgccaaatt gttgccggac tcaaacgcga aagcgaaggc aggcgcgtgc
    10801 ctgttatcgt gtttgccaaa ggcggcgggc tgtggctgga aagcatggca gaaatcggcg
    10861 cagacgcatt gggcttggac tggacgtgca acatcggcga agcacgccgc cgcgtcggca
    10921 agcaagtcgc cctgcaaggt aacttcgacc cgttcgccct cttcggtacg ccggaatcca
    10981 tccgcaccga agccgcacgt atcctagccg actacggaca cggcagcggc catgtcttca
    11041 acctcggaca cggcatcaac caacacgccg accccgaaca cgccaaaatc ttagtcgata
    11101 ccgtacacga gctgtcgcgg cagtatcacg gcgggtaagc cggcaggaaa ccgcccgata
    11161 tgccgtctga aagccgaggg atggaaaatt aggtaatacg gcaatatccg ccgtgtacgg
    11221 atagtacatg acggcggcgg tgttgccgta ttggcgtaat cccaaccgtc cctattttca
    11281 gacggcattt ttgttttcag atgcagggaa aaccgatggc aaaaacgctt aaaacccttt
    11341 accaatgcac cgaatgcggc ggcacttccc cgaaatggca gggcaaatgc ccgcattgcg
    11401 gcgagtggaa cacacttcag gaaagcttgg ccgcgcccga gccgaaaaac gcccgcttcc
    11461 aatcttgggc ggcggatacc tcgaccgtcc aatccctctc ctctgttacc gcgaccgaag
    11521 tgccgcgcaa tccgaccggt atgggcgaac tcgaccgcgt attgggcggc ggtttggtcg
    11581 atggtgcggt catcctgctc ggcggcgatc ccggcatcgg caaatccacg ctgctgttgc
    11641 aaaccatcgc caaaatggcg caaagccgca aagtgctgta cgtttccggc gaagaatccg
    11701 cccaacaagt cgccctgcgc gcgcagcgtt tggaactgcc caccgaaggc gtgaacctgc
    11761 ttgccgaaat ccgcatggaa gcgattcaag cagcgttgaa acagcatcag cccgaagtcg
    11821 tggttatcga ttccatccaa accatgtatt ccgaccaaat cacttccgcc cccggctccg
    11881 tgtcgcaggt gcgcgaatgt gccgcccaac tgacgcgtat ggcgaaacaa atgggcatcg
    11941 ccatgattct ggtcggacac gtgaccaaag acggcgcgat tgccggcccg cgcgtgctgg
    12001 aacacatggt tgataccgtg ctgtatttcg agggcgacca acattccaac taccgcatga
    12061 tacgcgccat caaaaaccgt ttcggcgcgg caaacgaatt gggcgtattc gccatgaccg
    12121 aaaacggttt gaaaggcgtg tccaacccgt ccgccatctt cctcgccagc taccgcgacg
    12181 acacgcccgg ttcgtgcgtt ttggttacac aggaaggcag ccgcccgctt ttggtcgaaa
    12241 ttcaggcatt ggtcgatgac gcgcacggct tcacccccaa acgcctcacc gtcggactgg
    12301 aacaaaaccg ccttgcgatg ctgcttgccg tattaaaccg ccacggcggc attgcctgtt
    12361 tcgaccaaga cgtgtttctc aatgccgtcg gcggcgtcaa aattggcgaa cccgccgccg
    12421 accttgccgt catccttgcc atgctctcca gcttccgcaa ccgccccatg cccgaaaaaa
    12481 ccgtggtttt cggcgaaatc ggcttaagcg gcgaagtccg ccccgtcgca cgcggacaag
    12541 agcggctcaa agaggcggaa aagctcggct ttaaacgcgc catcgtccca aaagccaata
    12601 tgccgcgcaa cgccaaagag tttccgaacc tgaaaatcta cggcgtttcg agtttgcagg
    12661 aagccatcga tatttgccgt gacagcaggg aataaacgga aatgccgtct gaaatcaggt
    12721 ttcagacggc atttggtttg tggcggattg aaacaagaag gcataccggc gacagataag
    12781 atttgtggca aagttgcctg tgatgtggca aaaacacaca cgcccgtcat ccccgcaagg
    12841 gtgggaatct ggagtcgtcc gtttctgcaa tgattgaaaa tcacggtaac ccaaccgatt
    12901 ggattcccga cttcgtggga atgaggggcg tgtgcatttg atttccatcc gccatatgtc
    12961 ggcgacgggc ttattcgcct acggtttttt gtatcagttt ttcggcgttt gccaaagtgt
    13021 ttgccacttc gtcaaaaccg atgcggctgc cggcgatgag ggcgcgcgta tcggtatagg
    13081 cggcgcgtac tttgccgtct gtttcggtaa cgaggacgcg caggggcagt tgcagggcga
    13141 aggcggggtc tttgaccatc agcggcgtgc cggctttggg cgtgccgaag acgatgactt
    13201 ttgccggctg catcgttaag ccgtttcggc gggcggcttc ctgatggtcg atgacggcaa
    13261 aaatgttcat ccctttgctt tttatggcgg tttcaaggcg gctgacggtt tcgtcaaagc
    13321 tgtattttga ggtgagggta tgcgtggtca tagcggtttc gttttgggtt tgcggttcgc
    13381 tggcaggatg tgccgaagcg gttgaaatgc agagtgcgga tgcggcaatc agggggagta
    13441 tgtgtttcat cgtatttcct tttcggtttg tttatcaggc tttggacggg gcggcacgcg
    13501 ccgcgcccga tgttgcgccg cgtgccggaa cgccgtatgc cgtctgaaag cctgtccttt
    13561 cagacggcat tgcgtcattt catccctttt gtgagcaggt cttcataacc gccgtgattg
    13621 gcaacatttg tataacctgc ttttttcagt tcttgaaggg cggcttcggc acgccgtccg
    13681 ctgcggcagt agaggttgac cggcgtgtct ttgtcgggcg cggcttcgtg tatgcggcgg
    13741 acgatttggt cgacggggat gttgaccgcg ttgtgcaaat gcccttcgct aaattcctgt
    13801 tcggaacgga catcgatcca aacggccgga tgttgcgcgg tttgggcggc ggatacgggt
    13861 ttttgcgggg ctgcctgcgc ggcaaaggcg gctgaggcaa tgagtgcggc ggtaatcagg
    13921 tgtttgatat tcatagggtt ttcctgcggt tgtcgtctta agggacggga agttatttta
    13981 tctgttccaa agcggcggca tctatgtccc aacgccaaac gccgccgcct ttgccatcca
    14041 atccgcgcaa aaacaggtag cggacggaaa cggcggcggg cggttgtccg cgcagtttga
    14101 agtagcgtgc ggcggcaacg gcgtaaatca gcgcctgaag gtaatagtgg tggtgcgcga
    14161 cggcttcgtc catcgcctgt tgcgtgtagg cggatgcgtc cgcgccgaga tggtttgatt
    14221 tgtagtcgat gacgcagata ttgccgtcgg ggtcttggca gaccatatcg ataaagccgt
    14281 ttaaaaagcc gttgacggtg tggaagtcga gcgtttcggc ggcggcacgg cagacttcgg
    14341 gcaatcggat atcgtcgcgg gcaaaccagt cgcgcagccg tttgaggccg aagtcttcgg
    14401 tgtggagggt aaagcccatt tcgggacagc ggcactcggg cgggatgtcg gacaggcagt
    14461 atgcccccgt cagcggcgtt ttgcggcagg cttccgccat ttcggcaacg gcaggcagcc
    14521 atatttcttc aaatccgtat tttttcagct tgtcggcaat gagagtttcc tgtccggcgg
    14581 ctgcttgtcc gaatttgaaa tcttcaagaa tttcgtgcag gcacagcccc gcctgcgtgc
    14641 ctttcggaaa atcgtgtatc gatatgccgt ctgaagccgt cggcgtttca gacggcatcg
    14701 ccggcaccga ggtttcggcg gcatccaagg acgggcaggc atcttcttcg ccgccgtcgg
    14761 gcgtttgggt atggcggctt aaggcggtaa agctggtgtg gcggacaaat cggaatctgc
    14821 gttcgggaat gctgtttgcg gcaaattcgg cggtttgacc ggcgttgccg cgataggcgg
    14881 cagggggcgg cgcatcttct gtgaaggcga aatttgtgcc ggaaggggcg ttgtccgcca
    14941 cgcgccgcca gttgcgtttg agcatcgcga tgccgtcttt ttcacacgca taggcacggc
    15001 ggacggtttc acggctgtct tggggcgagc cttcaatcag gtaggcgagg gggttgtcgg
    15061 cagtattggt ggagtacgcg gcgtagatgt tgagctgttc ctcggcacgc gtcagcgcga
    15121 cataaagcag gcgcaggcgt tccgccattt cttcatcggc gtattgtttc tgttcgtctt
    15181 cggacagttg cgcctttgcc aacagttcgg ttcggtttgc gctttggtgg aggatttgcc
    15241 agtcggacgg cccggtatct tgcgcgtccc acgcaaacgg gcagtacacc agcggatact
    15301 gcaaaccttt cgaggcgtgc atggtaacga ttttgaccaa atcttcgtcg ctttccagac
    15361 ggatggcgcg gttgtcgccg ccgttgttgc cggccaggct gatttggtcg cgcagccatt
    15421 tgtgcagcgc ggcggggttg cggttttgcg cgtcttcggc ggcaagcagt tcgagcagtt
    15481 ggaaatagtt ggtcaggctg cgcccgttgt tccggcttaa gaggcgtgtt tcgatgccgt
    15541 gtgtttggga aaattgctgc atggcggcga aaatgccgta ttgattccag ttgtcgagcg
    15601 cggttcgggc agattccgcc caatgcaaaa tctcgctttc gttttggttg aagtcgtgca
    15661 attgctgcgc gtcataaccg aatatgccgc ttgttaggac aaagcgcagc gttccggcgc
    15721 ggtgcggttc gagccagaag ccgatgagtg cggacagggc ggcggcttcg ggcgaggcga
    15781 acacggattc gcgcgaaagc aggacgcttt gcacctgccg ttttttcagg gcggcggaaa
    15841 ccatcaccgc ctcgttgtgc gtgcgtacca gcacggcaat atcgcccgac tgcaacgggc
    15901 agcctttgaa attcagacgg cattcggcgg cttcgttgag cgcgtgggcg atttcgtcgg
    15961 cgcaatagtc ggcggcacgg cggcgcaaaa cgtctttgtt ggctttttca ttgtcgtttt
    16021 cgtgcagcca acgaacctgt acggcaggac gtttgggcga caatctgctt tcggcacgcg
    16081 ccgcaccgac ttccgaataa ccgatgtttt ccaaaacgaa cgggcgttct ttgaggcgga
    16141 acagcgcgcc tatgctgccg ataagcgcgg cgtggctgcg gtagttggtg gcgagcgtgt
    16201 agcggtgccg cgcatcttcc gccgcctgaa ggtaggcgta aatgtccgca ccgcgaaagc
    16261 tgtaaatcgc ctgtttggga tcgccgacca gaaacagcgg gcggttttgg gcgatgaaga
    16321 ttttttggaa gatttcgtat tgcagcgggt cggtgtcttg gaactcgtcg atcagcgcgg
    16381 tttcccagtt ttcggcaacg gcgcgggcga gggtttcggc gtgcggattg tcggtcagcg
    16441 cggtgtggac atcgagaagc aggtcgtcga aacctcgttc gcggcgcgat tttttcatct
    16501 cggcaaggct gcggttgaga tatccgatta aatccagttg cagccggatc attgttgctt
    16561 cttccgcttc ttcgagtgcg tccaaatcac gcctgaagtc tgccagtttc tgcaattcgg
    16621 caaatactgc cgcatcgggc gttttgcctt ttttcagtcc ggcttcgagt ttgtcggacg
    16681 caagtttcaa gagtctgtcg tgcgtgtctt tgtccagaaa gggcagttgt ccggcggcgg
    16741 atttttgtgc cagttcttta aaaaggttgc cgaagctgtt tttgcggtaa ctgttgccgt
    16801 tgaggtcggg atggatgcgc caaaagccgg cttccagctc gggcagcagg cggcagacgg
    16861 tttgccatga ggtttcggcg ttgcgctgcg cctgtttcaa atccgcctgc ggacggcgga
    16921 aattcaggta cgggcgggac aggtaggcgc ggatttgggc aaggacggtt tgcggcacag
    16981 ctttgcgttt aaacgccaat gcggcaagca ccggatcatt gctgacgcgt tcccgccaaa
    17041 aatcttgcgc cgggataagc aggcggtcgc cgtcttcttc ggtcagttcg acatcgaacg
    17101 gtgcttggca caagaaggcg tagtcgcgca ggatacgttg gcagaagccg tggatggtat
    17161 agatggcggc gttgtcgaat tgcccgatgg cggccttgag gcggacaatc agacgcgtcc
    17221 ggccctcttt ttgcaaagcc tgttttaaga gtgcgggcag gaaggtgtcg cctttgtggt
    17281 gttccgcaca ataggcggcg atgccgtctg aaagcgtgtc gtctccaagt ttggcaattt
    17341 ctttactttc taaaacctgc aacacatcgt ccaaacgtgc gcgcaggcgt gttttcaact
    17401 cggcggtggc ggctttggtg aaggtaacga ccaatacgcg ctcgacgttt ttttgttcca
    17461 atacgatcag gcgcgtaaac agggcggcga tgccgtaggt ttttccggtg ccggcagagg
    17521 cctcaatcag gttggtgccg gcaatgggga cggttagcgg gtcgaatgct tggatgggtg
    17581 cggacatagc gtgtatgaaa acggttggat ggtatagtgg attaacaaaa atcaggacaa
    17641 ggcgacgaag ccgcagacag t
//
LOCUS       DAWGBY010000031        17322 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.031, whole genome shotgun sequence.
ACCESSION   DAWGBY010000031 DAWGBY010000000
VERSION     DAWGBY010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.031"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            208..1272
                     /locus_tag="WHG62_000905"
     CDS             208..1272
                     /locus_tag="WHG62_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ1725036.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIVHD
                     DVPTGPGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKAREAGV
                     ADYILDPSEVDVVAEVKKLTNGEGVDVAFECTSVNKVMDTLVEACKPAANLVIVSIWS
                     HPATINVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1413..1736
                     /locus_tag="WHG62_000906"
     CDS             1413..1736
                     /locus_tag="WHG62_000906"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ1725037.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1808..2131
                     /locus_tag="WHG62_000907"
     CDS             1808..2131
                     /locus_tag="WHG62_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ1725038.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2178..2381
                     /gene="tatA"
                     /locus_tag="WHG62_000908"
     CDS             2178..2381
                     /gene="tatA"
                     /locus_tag="WHG62_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ1725039.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2385..3071
                     /gene="tatB"
                     /locus_tag="WHG62_000909"
     CDS             2385..3071
                     /gene="tatB"
                     /locus_tag="WHG62_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ1725040.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSDTSAEILGDSGQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRGLRPKHR
                     AKPKLRVRKS"
     gene            3085..3855
                     /gene="tatC"
                     /locus_tag="WHG62_000910"
     CDS             3085..3855
                     /gene="tatC"
                     /locus_tag="WHG62_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ1725041.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWMVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTEQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3908..4513
                     /gene="maf"
                     /locus_tag="WHG62_000911"
     CDS             3908..4513
                     /gene="maf"
                     /locus_tag="WHG62_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ1725042.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPANIDETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPHSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGNAENRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGSIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4529..4882
                     /locus_tag="WHG62_000912"
     CDS             4529..4882
                     /locus_tag="WHG62_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ1725043.1"
                     /translation="MNRQTAYLLASFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4872..6686
                     /locus_tag="WHG62_000913"
     CDS             4872..6686
                     /locus_tag="WHG62_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
                     /protein_id="HEZ1725044.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALRLQPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACKSLVAHYGQERIVTLLAWSLLIGSLLQSCIVVIQFAGWEDTPM
                     LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLNIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIHDNLLSNLFTHSHNIVLQLLSEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKALKYRPYSATYRIALYLMRQGKVAEAKQWMRATRSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6876..7553
                     /locus_tag="WHG62_000914"
     CDS             6876..7553
                     /locus_tag="WHG62_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ1725045.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVHSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRAQSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDTPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7566..8972
                     /locus_tag="WHG62_000915"
     CDS             7566..8972
                     /locus_tag="WHG62_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ1725046.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9090..11516
                     /locus_tag="WHG62_000916"
     CDS             9090..11516
                     /locus_tag="WHG62_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ1725047.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EENQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQSAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALEAADPALIAEAL
                     HLPPYRHTTHNAVQFQFGSHSLYGDILTARCNGQTTTVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTIIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     YPKTLSLRNNTTVTITPILPEDAEAKQQFVRSLGPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLRTDHKIT"
     gene            11561..11806
                     /gene="rpsP"
                     /locus_tag="WHG62_000917"
     CDS             11561..11806
                     /gene="rpsP"
                     /locus_tag="WHG62_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ1725048.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11822..12331
                     /gene="rimM"
                     /locus_tag="WHG62_000918"
     CDS             11822..12331
                     /gene="rimM"
                     /locus_tag="WHG62_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ1725049.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTVSVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12331..13080
                     /gene="trmD"
                     /locus_tag="WHG62_000919"
     CDS             12331..13080
                     /gene="trmD"
                     /locus_tag="WHG62_000919"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ1725050.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRSLIPKESRILNKILQEQREIQS"
     gene            13096..13461
                     /gene="rplS"
                     /locus_tag="WHG62_000920"
     CDS             13096..13461
                     /gene="rplS"
                     /locus_tag="WHG62_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ1725051.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13783..14508
                     /locus_tag="WHG62_000921"
     CDS             13783..14508
                     /locus_tag="WHG62_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725052.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14544..15419
                     /locus_tag="WHG62_000922"
     CDS             14544..15419
                     /locus_tag="WHG62_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ1725053.1"
                     /translation="MNPYDLLITPFAEFDFMRYALVSVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15496..16422
                     /locus_tag="WHG62_000923"
     CDS             15496..16422
                     /locus_tag="WHG62_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEZ1725054.1"
                     /translation="MKHPKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHDHDHEGHHHDHGEYDPHVWNDPVLMSTYAQNVAEALI
                     KADPEGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHI
                     EFIAPQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSG
                     KLYSDALGNAPADTYIGMYRHNIKALTNAMKQ"
     gene            complement(16702..>17322)
                     /locus_tag="WHG62_000924"
     CDS             complement(16702..>17322)
                     /locus_tag="WHG62_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725055.1"
                     /translation="YGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDV
                     LNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDKNSD
                     TMHFKGFKAADVHFIRSGSDLVLSASEQDNVRISGFFYGENHRVDTFVFDDAAISNPD
                     FAKYINAGNNLVQSMSVFGSNTAATGGNVDANTQSVQQPLLVTPSA"
BASE COUNT         4542 a         5503 c         3775 g         3502 t
ORIGIN      
        1 cgtctgaagc cgattcggtt ttcagacggc atcattattt gacctgacgc aaacagaaag
       61 ccttccgcgt gcttaaacac atctcttgta gtaaaatatc taaacagatt caactggaaa
      121 cggtcaggct tcttcacgtc attcccattt caaccgccgc ctgccagatt cagacggtat
      181 tcctacttga aaacaaggag cgttacaatg aaagcagcac gtttttacga caaaggcgac
      241 atccgcatcg aagacatccc cgaaccgacc gtcgcccccg gcaccgtcgg catcaatgtt
      301 gcctggtgcg gcatctgcgg taccgacctg cacgaattta tggaaggtcc gattttcatc
      361 ccgccctgcg gccatccgca tccgatttcc ggcgaatccg cacccgtcac gatgggacac
      421 gagttctccg gcgtggttta tgccgtcggc gaaggcgtgg acgacatcaa agtcggccaa
      481 cacgtcgtgg tcgagcctta catcgtacac gatgacgtac cgaccggccc gggcagcaac
      541 taccacctct ccaaagacat gaactttatc ggcttgggcg gctgcggcgg cggtctgtct
      601 gaaaaaatcg ccgtcaaacg ccgttgggtg catccgattt ccgacaaaat cccgttggat
      661 caagccgctt tgatcgagcc tctgtccgtc ggacaccacg cctatgtccg cagcggcgcg
      721 aaagcaggcg atgtcgcatt ggtcggcggt gcaggcccga tcggtttgct gttggctgcc
      781 gtgctgaaag ccaaaggcat caaagtcatc atcaccgaat tgagcaaggc gcgcaaagac
      841 aaagcccgcg aagccggtgt ggccgactac atcctcgacc cgtccgaagt cgatgttgtt
      901 gcagaagtga aaaaactgac caacggcgaa ggcgtagacg ttgcattcga atgcacaagt
      961 gtcaacaaag tcatggatac cttggtagaa gcctgcaaac ctgccgccaa tttggttatc
     1021 gtatccattt ggagccaccc cgccaccatc aacgtccaca gcgtcgtaat gaaagagttg
     1081 gacgtacgcg gcaccatcgc ctactgcaac gaccacgccg aaaccatcaa actggtcgaa
     1141 gaaggcaaaa tcaaccttga gcctttcatc acccagcgca tcaagctgga cgagctggtt
     1201 tccgaaggct tcgagcgtct gattcacaac aacgaatccg ccgttaaaat tattgtgagt
     1261 ccaaacctgt aagcaaatta catttgcaac agcacaaatg ccgtctgaaa cgctcagacg
     1321 gcattttcca acgaagcgca acaggcgtat tgcccgagag cagccgttta gcctatcatt
     1381 ccgaacaaac agaaacaaac agaaggaaaa tcatgggaga ttccgtacta tccgccatcc
     1441 aacaaaccat cacccagcga aaatctgcca atccgtccga atcttacgtc gcacagctct
     1501 tgcataaggg cgaagacaaa atcctaaaaa aagtgattga agaggcgggc gaagtgttga
     1561 tggcatccaa agacaaaaac ccgtcccacc tggtttacga agttgccgac ttatggtttc
     1621 acaccatgat tcttctgaca caccacgacc tgaaggcgga agacgtattg gacgaacttg
     1681 cgcgccgcca aggtttgtcg ggcttggccg aaaaagccgc tcgcacagaa tcttgaattt
     1741 atattaaaat ccgcactttc ccacattcaa tccgtctgac cgctgttcag acggcaacgg
     1801 agccgttatg gacaactgta ttttctgcaa aatcgccgcc aaagacattc cggcgcaaac
     1861 cgtctatgaa gacggcgaaa tggtttgttt caaagacatc aaccccgctg ctccggttca
     1921 tctgctgctg attcccaaag tccatttcga ttcgttggca cacgccgcgc ccgaacatca
     1981 gccccttttg ggaaaaatga tgctgaaagt tcccgaaatc gccaaagcgg caggactggc
     2041 agacggcttc aaaaccctga tcaacaccgg aaaaggcggc ggacaagagg tcttccacct
     2101 gcatatacac atcatgggca cacccgtata aaccgttatt tcacaatcaa cccctaatac
     2161 ttacttaagg atacatcatg ggcagttttt ctctgacgca ctggattatc gtactgatta
     2221 tcgtcgtttt gatattcggc accaaaaaac tgcgcaacgt cggcaaagac ctcggcggtg
     2281 cggttcatga cttcaaacag gggctgaacg aaggtacaga cggcaaagaa gcccaaaaag
     2341 acgatgtaat cgaacacaaa aaagacgaag acaaagcgta atttatgttt gatttcggtt
     2401 tgggcgagct ggtttttgtc ggcattatcg ccctgattgt cctcggcccc gaacgcctgc
     2461 ccgaggccgc ccgcaccgcc ggacggctca tcggcaggct gcaacgcttt gtcggcagcg
     2521 tcaaacagga atttgacacg caaatcgaac tggaagaact aaggaaggca aagcaggaat
     2581 ttgaagctgc cgctgctcag gttcgagaca gcctcaaaga aaccggtacg gatatgcaga
     2641 acagtctgca cgacatttcc gacggtctga agccttggga aaaactgccc gaacagcgca
     2701 cgcctgctga tttcggtgtc gatgaaaacg gcaatccctt tcccgatgcg gcaaacaccc
     2761 tatcagacgg catttccgac gttatgccgt ccgaacgttc cgatacttcc gccgaaatcc
     2821 ttggggacag cgggcaaacc ggcagtacag ccgaacccgc ggaaaccgac caagaccgcg
     2881 catggcggga atacctgact gcttctgccg ccgcacccgt cgtacagacc gtcgaagtca
     2941 gctatatcga tactgctgtt gaaacgcctg ttccgcacac cacttccctg cgcaaacagg
     3001 caataagccg caaacgcggt ttgcgtccga aacaccgcgc caaacctaaa ttgcgcgtcc
     3061 gtaaatcata aagagagcaa tccggtgtcc gaaacacaaa acgaacaacc cgtccaaccg
     3121 cttgtcgagc atctcatcga gctgcgccgc cgcctgatgt ggatggttgt cggcatctta
     3181 gtctgctttt tcggcctaat gccgtttgcc caacaactct atacttttat cgccgacccg
     3241 ctgatggcaa acctgcccaa agacaccagc atgattgcca cagatgtcat cgcaccgttt
     3301 ttcgttccgg tcaaagttac cctgatggcg gcatttttaa tttcgctgcc gcatacgctc
     3361 taccaaatct gggcatttgt cgcgcccgca ctctaccaaa acgaaaaacg cctgattacg
     3421 ccgctcgtcc tctccagcgt cagcctgttt ttcatcggca tggcatttgc ctactttttg
     3481 gttttccccg tcattttcaa attccttgcc agcgttaccc ctgtcggtgt caatatggcg
     3541 acagacatcg acaaatacct ctccttcatc ttggggatgt ttgtcgcatt cggtacaacg
     3601 tttgaagtcc ccattgtcgt tatcctgtta accaaaattg gtgtggtaac aaccgaacag
     3661 ctcaaacgcg cccgccccta tgtgattgtc ggcgcgtttg tcattgccgc catcatcacg
     3721 ccgcccgatg tgatttcaca aaccctgctt gccattccgc tgattctctt atacgaagca
     3781 ggtatttggt tcggacgctt tttcacgcca cgttcagaac aggatggcga catacagccg
     3841 cctgcaacaa cctgacacta tgccgtccga acctccgcct cataccgcaa cagattaagg
     3901 aatacctttg aataccctct atttaggttc aaacagcccg cgccgaatgg aaatcctgac
     3961 acagttgggc tatcaggtcg tcaagctgcc tgccaacatc gacgaaacgg tcagacagaa
     4021 cgaagaccct gcccgttacg ttcaaaggat ggcagaagaa aaaaaccgaa ccgccctgac
     4081 cctcttttgc gaaaccaacg gcacaatgcc cgatttcccc ctgattaccg ccgacacctg
     4141 cgtcgtttca gacggcatca tattaggcaa accccactcc caagccgaag caatcgaatt
     4201 tttaaaccga ttgtccggca aacaacatac cgtcctgact gccgtctgca ttcattatcg
     4261 cggcaatgcg gaaaaccgcg tccaaaccaa ccgcgtcgtt ttcaagcccc tgagttcgga
     4321 agaaatttcc gcctatgtcc aaagcggcga accgatggac aaagccggtg cctacgccgt
     4381 acaaggcata ggcagcatct ttatccaatc tatcgaaggc agcttcagcg gcattatggg
     4441 gctgcccgtt tatgaaaccg tttcgatgtt gcaggatttg ggataccgta ccccaccctt
     4501 catccgagcc taacccgtaa agaccgccgt gaacagacaa accgcttacc tccttgcctc
     4561 tttcagcctg atcgcactga taatcctgtc cctttcctgg gaactgtgga ttgcaccgtt
     4621 gcgcccgggc ggctcgtggc tcgcgctcaa agccctcccc ctctgtctgc cgctttcagg
     4681 catcttgaaa aagaaaatct atacttacca atacagctcc atgctggttc tgatttactt
     4741 tgccgaagcc gtcatgcgcc tgttcgacgc ctatcccgca gaacagattt gcgccgcgct
     4801 ttccgcagta ttcagcatca tcttcttcat atcctgcctg tcgttcgtca aacaatacaa
     4861 ggaaacaaac aatgcccgct gaaacgaccg tatccggcgc gcaccccgcc gccaaactgc
     4921 cgatttacat cctgccctgc ttcctttgga taggcatcgt cccctttacc tttgcgctca
     4981 ggctgcaacc gtcgcccgac ttttaccacg atgccgccgc cgcagccggc ctgattgtcc
     5041 tgttgttcct cacggcagga aaaaagctgt ttgatgtcaa aatcccacct atcagcttcc
     5101 ttctgtttgc aatggcggcg ttttggtatc ttcaggcacg cctgatgaac ctgatttacc
     5161 ccggtatgaa cgacatcgtc tcttggattt tcatcttgct cgccgtcagc gcgtgggcct
     5221 gcaagagttt ggtcgcacac tacggacaag aacgcatcgt taccctgctt gcctggtcgc
     5281 tgcttatcgg ctccctgctt caatcctgca tcgtcgtcat ccagtttgcc ggctgggaag
     5341 acacccccat gcttcaaaac attattgttt acagcgggca aggcgtaatc ggacacatcg
     5401 gacagcgcaa caacctcgga cactacctga tgtggggcat actcgccgcc gcctacctca
     5461 acggacaacg aaaaatcccg cccgccctcg gcgcaatctg cctgattatg cagaccgccg
     5521 ttttaggttt ggtcaattcg cgcaccatct tgacctacat agccgccatc gccctcatcc
     5581 ttcccttctg gtatttccgt tcggacaaat ccaacaggcg gacgatgctc aacatagccg
     5641 cagccgtatt ccttaccgcg ctgttccaat tttccatgaa caccattctg gaaaccttta
     5701 ccggcatccg ctacgaaact gccgtcgaac gcgttgccaa cggcggtttc acagacttgc
     5761 cgcgccaaat cgaatggaat aaagcccttg ccgccttcca gtccgccccg atattcgggc
     5821 acggctggaa cagttttgcc caacaaacct tcctcatcaa tgccgaacag cacaacatac
     5881 acgacaacct cctcagcaac ttgttcaccc attcccacaa catcgtcctc caactccttt
     5941 cagagatggg gatcagcggc acgcttctgg ttgccgcaac cctgctgacg ggcattgccg
     6001 ggctgctgaa acgccccctg acccctgcat cgcttttcct gatctgcacg cttgccgtca
     6061 gtatgtgcca cagtatgctc gaatatcctt tgtggtatgt ctatttcctc atccccttcg
     6121 gactgatgct ctttctgtcc cccgcagagg cttcagacgg catcgccttc aaaaaagccg
     6181 ccaatcttgg catactgacc gcctccgccg ccatattcgc aggattgctg cacttggact
     6241 ggacatacac ccggctggtt aacgcctttt cccccgccac tgacgacagt gccaaaaccc
     6301 tcaaccggaa aatcaacgaa ctgcgctata tttctgcaaa cagtccgatg ctgtcctttt
     6361 atgccgactt ctccctcgta aacttcgccc tgccggaata ccccgaaacc cagacttggg
     6421 cggaagaagc aaccctcaaa gcactaaaat accgccccta ctccgccacc taccgcatcg
     6481 ccctctacct gatgcggcaa ggcaaagttg cagaagcaaa acaatggatg cgggcgacac
     6541 ggtcctatta cccctacctg atgcccagat acgccgacga aatccgcaaa ctgcccgtat
     6601 gggcgccgct gctacccgaa ctgctcaaag actgcaaagc cttcgccgcc gcgcctggtc
     6661 atccggaagc aaaaccctgc aaatgaccct cgccggcgga tgcgtatgcc gtctgaaata
     6721 taaagaccct tgcaaagcat tgcaaaaaac agcaaacacg cagaaaaata cgctatcaaa
     6781 aaacattgca gccgtgttaa gataaaccgt taaacactcg tttcatgccc gtcccaaacc
     6841 cggcgggcgc ataccaccac ggaaaaggaa acaccatgag ccgcgtatta ctcgtagatg
     6901 acgatgccct gctgaccgaa ctgctgaccg aatacctgag cgccgaaggt ctgaacgtcc
     6961 acagcgttcc cgacggggaa gcaggcgtac aggaaatcct gagcgggcaa tacgatgtag
     7021 tcgtattgga ttccatgatg cccaaaatga acggcttgga tgtcttgaaa aacgtacgcg
     7081 cccaaagcac cgtccccatc atcatgctga ccgccaaagg cgacgacatc gaccgaatca
     7141 tcggcttgga aatgggtgcg gacgactatg tccccaaacc ctgcacacca cgcgaactcc
     7201 tggcacgcat caatgccatc ctgcgccgcg cacaacacag cggcgaacag aacaacgcac
     7261 ccaacagcat ctccgtcagc gatgtcgtcc tgtaccccgc caaacgccag gcatccgtca
     7321 aagacactcc gctcgaactg actagcaccg aattcaacct gctcgaagtc ctgatgcgcc
     7381 atgccggaca ggtagtcagc aaagaaaccc tgtccgtcga agcactcgac cgcaaactgg
     7441 caaaattcga ccgcagtatc gacgtacaca tctccagcat ccgccacaag ttgggcgatg
     7501 cctccctgat tcaaaccgta cgcggcttgg gctacctgtt tgtcaaaaac tgaagcagcg
     7561 ggcaaatgaa actgttccaa cgcattttcg ccacattttg cgcggttatc gtctgcgcaa
     7621 tctttgtggc gagtttttct ttttggctgg tgcagaacac ccttgccgaa aaccagttca
     7681 accaacgccg caccatcgaa accactttga tgggcagcat catttccgca ttccgggcac
     7741 gcggggacgc gggcgcgcgc gaaatcctga cggaatggaa agacagcccc gtctcatcgg
     7801 gcgtgtacgt tatacagggc gacgagaaaa aagatatcct gaaccggtat atcgacagct
     7861 acaccatcga acgcgcccgg cttttcgccg ccggacaccc gcattccaac ctcgtccata
     7921 tcgaatacga ccgcttcggc gaagaatacc tgttcttcac caaagactgg gacaaactcc
     7981 aagcccgccg cctgcccagc cccctgttga tccccggcct gccgctcgcc ccgatttggc
     8041 acgaactcat catattgtcc ttcatcatcg tcgtcggact gctgatggcg tacatcctcg
     8101 ccggcaatat cgccaaaccc atcagaatct taggcaacgg catggacagg gtggcaaacg
     8161 gagaacttga aacccgtatc tcccaacagg tcgacgaccg cgacgacgaa ttgtcccatc
     8221 ttgccatcca attcgacaaa atggtggaaa aactcgaaaa actcgttgcc aaagaacgcc
     8281 acctgctcca ccacgtttcc cacgaaatgc gctccccgct tgcccgtatg caggcgattg
     8341 tcggactgat tcaggcgcag ccccaaaaac aggaacaata tctcaaacgg ctggaaggcg
     8401 aactgacccg catggatacg ctggccgggg aactgttaac cctgtcccgt ctcgaaactt
     8461 ccaatatggc tttggaaaaa gaaagcctga aactcctgcc cttcctgggc aacctggtag
     8521 aagacaatca aagcattgcc cagaaaaacg gacaaacggt taccctgtct gccgacggaa
     8581 aaatccccga aaacacaacc atccttgcca acgaaagcta cctgtaccgc gccttcgaca
     8641 acgtcatccg caacgccgtc aactacagtc ccgaaggcag caccatcctg atcaacatcg
     8701 gacaagacca caaacactgg ataatcgacg ttaccgacaa cggccccggc gtggacgaaa
     8761 tgcagctccc gcacatcttc accgctttct accgtgcaga ctccagtgcc aacaaacccg
     8821 gaacaggact ggggcttgca ttgacccaac atattattga acagcactgc ggcaaaatca
     8881 tcgccgaaaa catcaaaccg aacgggctgc ggatgcgctt catcctaccc aagaaaaaaa
     8941 ccggttccaa aacagaaaaa agtgcgaact gaccataatg ccgtctgaac cggcttcaga
     9001 cggcattgca caaacagtta ccccaaaaca aacacacagc gggtgcatct ccaaaaatca
     9061 cgcacatacc gtccgcaaag gaatatatca tgtcggcaca aaccgatccc ggctacttct
     9121 tcatgcccaa ccacattatc ctgataggcg cgagcgaacg tccgtacagc ctgggcgaac
     9181 gcgtactcag caacctgctg agtacgccct ttcaaggaaa aatcaccccc gtaaacccgc
     9241 gccaccacac catagccggg cttcccgcct acaccagcct caacaaaatc cccggcaatg
     9301 cagacctgat tattgccgtt accctacccg acagttacga caccctcttc aaaacctgcc
     9361 gcaaaaagca gctccgacac atcatcctca tacaggactg ggacagcctg tctgccgcag
     9421 aactgcacac cgccgaaact gccatccgca aacaccacgg caacggactc aacatcaccg
     9481 cctgcaccac cgcaggcatc caactgccct cactcggact taacatcagt acccaagacg
     9541 gatacgccgc aggccatacc gccatactga ccggcaatgc cgccgtcagc cgccaaatcg
     9601 acaacatcct gaacaaactc cgtcaaggca catcccgcca catcagcctg catcccggca
     9661 tcagccccat cacatccgcc gattggctca accgcttcgg acacagcctg cacaccaaaa
     9721 ccgccgtcct acaccacaac cctgaagaga atcagcgcaa actgttcagc gcaatccgcc
     9781 aatttacccg ccatacgccg ctgattctcc acatcacctg ccgcacgaca gaaaccgacc
     9841 gtgccgtact gcactgcctc gcccgacact gcaacttcct catcagtttc aacgccgacg
     9901 acctcgaagc cgcactgcgc gcccaactgt ccgaccttcc acccctgtcc cgactcgaca
     9961 tcctgtccga cacgcctgcc gaatggctga acgcgcacgc gccaaaaacc ctcgccctcc
    10021 actttcccaa ccttccccac cacatccgca acggacacct gaccggcaca cccacaccct
    10081 caatctgcca cgacatcgcc tcacgtcagc ttgcccgccc cgacacccaa gccgtcctga
    10141 ccatcctcag cccctccgga cacgaggatt acaaaaaaac agcacgcgcc cttatccgcc
    10201 tgtccgaaca gagcgccaaa cccctgctcg tcagcagccc cttttcagac ggcataacac
    10261 atttcgacac ccccactcag gcaatccgca ccctttccta ccgcaacacc gccgccgccc
    10321 tgaaacaggc acagctcgac attgcaccgc cgcagccatg ccgtctgaaa acaccgcaac
    10381 cccaaaacat caaaaaagcc ctcgaagccg ccgaccccgc cctaatcgcc gaagccctgc
    10441 acctcccccc ctaccggcac accacccata acgccgtcca attccaattc ggcagccact
    10501 ccctctatgg cgacatcctg accgcacgtt gcaacggaca aaccactacc gtactcccgc
    10561 cgtttaccac gctcgacagc cgccaccttg cccgctttgc cgaactcgac ggcacacaaa
    10621 ccctcgacca gttcctgcac acactgacca tcattcccga ataccgccaa cacattctcg
    10681 gcatcaccct caacctaaac ggcggacaat acagcagcga tttcatctta aagacacccg
    10741 aaacacacga cacgcccaaa cgcaagaaca caggcaaagc cgcccaaacc ctcgaacatg
    10801 ccgccgcaaa aatgcagagt gccgccgcat acctgaaaca caaaaacccg acagccgccg
    10861 aatttctccg ccacacaagc gaagccgccg cagaactgct cggcagcaaa accgaaaccg
    10921 gagcagccgt acccaacgta cttgccccct atcccgcagc ataccccaaa acactgtccc
    10981 taagaaacaa cacgaccgtt accattaccc ccattttgcc cgaagacgca gaagccaaac
    11041 agcagttcgt ccgcagcctc ggtcccgaag cacggtacac acgcttcatg acccacacca
    11101 acgaactgcc cgcagccacg ttggcacgcc tgtgcaaccc cgattaccac tgtgaagccg
    11161 catggacggc aaaggatgcc gacagcaaca tcgtcgccgt cgtccgccac agccgcctga
    11221 accgcaacga atgcgaattc ggcatcacac tggcggaaca tatgcgcggc agcggactgg
    11281 cacagaaaat gatggaactc atcatccaaa ccgccgcaca gcaaggctac cggactatga
    11341 gtgccgacat tctcaaaacc aataccccca tgatcaaact tgctgaaaaa tcaggattta
    11401 ccctcaagga atcggacacc gaaaaaaacc tgtaccgcgc atatctgaac cttgcggcag
    11461 acaaaacaac agaaaaaaca aataaaaact tgcgcaccga ccacaaaata acctaaaatc
    11521 ggcagtttcc atatatccga ttttctcaaa aggactcaaa atggtagtta tccgtttggc
    11581 acgcggcggc tcgaaacacc gccccttcta caacgtcatc gttactgact cacgcagccg
    11641 ccgcgacggc cgcttcatcg aacgcgtagg cttctacaac cccgtagcca acgaaaaaca
    11701 agagcgcgtc cgcctcaatg cagaccgcct gaaccactgg attgcacaag gcgcgcaagt
    11761 cagcgactcc gttgcaaaac tgattaaaga acaaaaagcc gcctaattca catttgccgc
    11821 catgacagac actcaaaacc gggtagccat gggctacatc aaaggcgtat tcggcataaa
    11881 aggctggttg aaaattgccg ccaacaccga atattccgac agccttttgg actaccccga
    11941 gtggcatttg gtcaaggacg gcaaaaccgt cagcgttacc cttgaagccg gaaaagtcgt
    12001 caacagcgaa ctccaagtca aattcgaagg cataaacgac cgcgacttgg cattctcatt
    12061 gcgcggttac accatcgaaa taccccgtga agcattcgcc ccgacagaag aagacgaata
    12121 ctactggaca gacttggtcg gcatgaccgt cgtcaacaaa gaccataccg ttttaggcaa
    12181 ggtaagcaac ctgatggaaa ccggcgcaaa cgacgtattg atgattgacg gagaacacgg
    12241 gcagattctg attccgttcg tttcccaata tatcgaaacc gtcgataccg gcagcaagat
    12301 tattactgcc gactggggtt tggactactg atgcttatcc aggcagttac cattttcccc
    12361 gaaatgttcg acagcattac ccgctacggc gtaacgggac gcgcgaacag acagggaatc
    12421 tggcagtttg aagcagtcaa tccccgaaag tttgccgaca acagattggg ctacatcgac
    12481 gaccgcccgt tcggcggcgg cccgggaatg attatgatgg ctccgccgct tcatgcagca
    12541 atagaacacg ccaaagcaca atcctcccaa gctgcaaaag tcatctacct cagcccccaa
    12601 gggaaaccgc tgacacacca aaaagcggta gaactggcag aacttccgca tctgattctg
    12661 ctgtgcggac ggtatgaggg catagacgaa aggcttctgc aaagcagcgt cgatgaagaa
    12721 atcagcatcg gagacttcgt tgtttccggc ggagagcttc ccgccatgat gctgatggat
    12781 gcggtattga ggctcgtacc cggcgtattg ggcgatatgc agtctgccga acaagattcg
    12841 ttctcaagcg gcattttgga ctgcccccac tacaccaaac ccttagaatt tcaaggcatg
    12901 gctgttccgg aagtattacg ttccggcaat catggcttga tagcggaatg gcggttggaa
    12961 caatcgctgc gccgcacctt ggagcgcaga cccgatcttt tggaaaagcg cagtttaatc
    13021 ccaaaggaat cccgcatctt gaataaaatc ctacaagagc aacgggaaat ccaatcataa
    13081 tttaggaaaa aaacaatgaa cctgattcaa cagctcgagc aagaagaaat tgcccgcctg
    13141 aacaaagaaa tccccgaatt cgcaccgggc gacaccgtag tcgtatccgt acgcgtcgtg
    13201 gaaggtaccc gcagccgtct gcaagcctac gaaggcgttg tcattgcacg ccgcaaccgt
    13261 ggtctgaaca gcaacttcat cgtccgtaaa atttccagcg gcgaaggtgt tgaacgtact
    13321 ttccaactgt actctccgac cgtcgaaaaa atcgaagtca aacgccgtgg cgacgtacgc
    13381 cgtgccaaac tgtactacct gcgcggtctg accggcaaag ctgcacgcat caaagaaaaa
    13441 ctgcctgcac gcaaaggttg attcaaaccc gttttcccca atgccgtctg aaccttctga
    13501 cggcatttct tattgccgca acatccgcaa cggaacagca ccaagaagca caccccttcc
    13561 ggcacatccc gaatccccgt ccgaaccgaa caaaatttac agaccaaacg ttatacagta
    13621 tcatatcagc catataataa taaccgcttt accgccttcc ctttcaaaac cgcaaatcat
    13681 catgacacct tcccttttac tatcaggatt gaccttccgc ctcgtccttg ccctgattgc
    13741 cgtatccctt ttatggggcg tttacttttg ggcagtatcc gcatgagcat cattgtcgaa
    13801 aacctgaccg tcagctaccg ccgccgacct gccgtgcacc atgtggacat tacttttgaa
    13861 gaacatagta tgtgggcggt tttcggtccc aacggcgcag ggaaatccac ctttctcaaa
    13921 tccttaatgg gattgcagcc tatcgatacg ggcagcatcc ggctggacgg attgacccgt
    13981 cagaacattg cctaccttcc ccagcagtcc gacatcgacc gctcgcagcc catgaccgtt
    14041 ttcgacttgg cggcaatggg gctatggtat gaaatcggtt ttttcagagg aataaatgcc
    14101 gttcaaaaac aacgcgttca cgaatctttg gaacgcgtcg ggatgcggca gtttgccggc
    14161 cgccaaatcg cccacctctc aaacggacaa ttccagcgtg tcctttttgc ccgaatgctg
    14221 gttcaaaacg ccaaattcct acttctagac gaacctttca acgctgttga tgcacggacg
    14281 acctacgaac ttctcgacgt attgcagaaa tgccattgcg gcggacacgc catcatcgcc
    14341 gtactgcacg attacgaaca agtccgtgcc tactttccca ataccctgct gctcgcccgc
    14401 gaaaaaattg cggcaggcgc aaccgagacc attctgacag aaccctacct cgcccaagcc
    14461 aacgccaaaa tgcagcaaca ggaaagcccc gagtggtgcg cctcataaat gccgtctgaa
    14521 accatgtccc cgtaccaaac actatgaacc cctacgacct gcttatcaca ccctttgcag
    14581 aattcgactt tatgcgctac gccctcgtat ccgtcttctg cctgtccctc agtgccgcac
    14641 ccgtcggcgt attcctcgtc atgcgccgta tgagcctgat aggcgacgca ttgagccacg
    14701 ccgtcctgcc cggtgccgcc gtcggctaca tgtttgccgg cttaagcctg cccgccatgg
    14761 gtttgggcgg cgtagccgca ggtatgctga tggcactgct tgccggactc gtcagccgct
    14821 tcaccaccct gaaagaagat gccaactttg ccgcctttta tctcagcagc ctcgccatcg
    14881 gtgtagtcct cgtcagcaaa aacggcagca gcgtcgatct gctgcatctg cttttcggct
    14941 ctgtacttgc cgtcgatatt cctgccctgc agctcatcgc cgccgtatcc agcctcacgc
    15001 tcattaccct tgccgtcatc taccgcccgc tcgtactcga aagcatcgac cccctgtttc
    15061 tcaaatctgt cggcggcaaa ggcgggcttt ggcacgtcct ctttctcgtc ctggtcgtca
    15121 tgaacctcgt atccggcttt caagccctcg gcacactcat gtccgtcgga ctcatgatgc
    15181 tgccagccat taccgcccgc ctgtgggcga agcacatggg cgcactcatc ctcctatccg
    15241 ttctgacagc cctgctgtgc ggcttgagcg ggctgctcat ttcctaccac atcgaaatcc
    15301 cttccggccc cgccatcatc ctctgttgca gcgtccttta tctcttttcc gtcatactcg
    15361 gcaaagaagg cggcattctg accaaatggc tcaaaaacca ccgccaccac accacctgac
    15421 cccgcaagcc gcttgaacaa acaggcggct tgttttacca taacagatgt tacgttatat
    15481 cacaggagaa cagttatgaa acaccccaaa ctcaccctta ttgccgcatt gctaaccacc
    15541 gccgcaactg ccgcccccct gcccgtcgta accagcttca gcattttagg cgacgtagcc
    15601 aaacaaatcg gcggagagcg cgtatccata caaagtttgg tcggagccaa ccaagatacg
    15661 cacgcctatc atatgaccag tggcgacatt aaaaaaatcc gcagtgcaaa actcgtcctg
    15721 ctcaacggct taggacttga agctgccgat gtacaacgtg ccgtcaaaca gagcaaagta
    15781 tcctatgccg aagcgaccaa aggcatccaa cccctcaaag ccgaagaaga aggcggacac
    15841 catcacgacc acgatcatga ccacgatcat gaccacgaag gacaccacca tgaccacggc
    15901 gaatatgacc cccacgtctg gaacgacccc gtcctcatgt ccacctatgc ccaaaacgtc
    15961 gccgaagccc tgataaaggc cgaccccgaa ggcaaagttt attatcaaca acgcttgggc
    16021 aactaccaaa tgcagctcaa aaaactgcac agcgacgcac aagccgcatt taacgccgtc
    16081 cctgccgcca aacgcaaagt cctgaccggg cacgatgcct tttcctatat gggcaaacgt
    16141 taccatatcg aattcatcgc cccgcaaggc gtgagcagcg aagccgagcc ttcagccaaa
    16201 caagtcgccg ccatcatccg ccaaatcaaa cgcgaaggca tcaaagccgt attcaccgaa
    16261 aatatcaaag acacccgcat ggttgaccgt atcgccaaag aaaccggtgt caacgtcagc
    16321 ggcaaactgt attccgacgc actcggcaac gcgcccgcag acacctacat cggaatgtac
    16381 cgccacaaca tcaaagcctt gaccaacgcg atgaagcaat aaaaccgttt gattggtttg
    16441 aatttgaaaa ggcaaaaggc cgtctgaaaa ttatagtgga ttaacaaaaa tcaggacaag
    16501 gcgacgaagc cgcagacagt acagatagta cggtaaggcg aggcaacgct gtactggttt
    16561 ttgttaatcc actatattgc tagaagtgca ccgattaagg ttaattaaaa tacgaccctt
    16621 atcccaatat taagaaaaac agcaatcaaa ataaacttga ttgctgtttt tcagtttaag
    16681 ccatgaatgt gattaggctc cttatgcaga tggcgttacc aataacggct gctgtacgga
    16741 ttgtgtattg gcatccacat ttccgcctgt cgcagcagta ttagaaccga acacagacat
    16801 agactgtacc aaattattgc cagcattaat atacttggca aaatctggat tactgatagc
    16861 tgcatcatca aagacaaatg tatctacacg atggttttca ccatagaaga atccggaaat
    16921 acgtacgttg tcttgttcag aagcgctaag caccaaatca cttccggaac ggataaaatg
    16981 aacatctgct gctttaaatc ctttaaagtg catagtgtca gagtttttat ccacatggta
    17041 attatagacc gtatcctgac cgaagccttt gccgaagaca taagtatccg aaccgctgcc
    17101 gccctccaag taatcattgc ctgcaccgcc gatcagagtg tcgttaccgt cttcgccgtt
    17161 caaatgatca ttgccttcgc caccattcag tacatcgtta ccattatagc cgtacagggc
    17221 gtcgttgcct tctcctccat cgagcgtatc attgccattg ccactgtaga tactgtcgtt
    17281 gcctgcatca ccattcagca ggtcatcccc gtcggcaccg ta
//
LOCUS       DAWGBY010000032        17023 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.032, whole genome shotgun sequence.
ACCESSION   DAWGBY010000032 DAWGBY010000000
VERSION     DAWGBY010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.032"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(462..797)
                     /locus_tag="WHG62_000925"
     CDS             complement(462..797)
                     /locus_tag="WHG62_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ1725056.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(877..2997)
                     /gene="dnaX"
                     /locus_tag="WHG62_000926"
     CDS             complement(877..2997)
                     /gene="dnaX"
                     /locus_tag="WHG62_000926"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ1725057.1"
                     /translation="MAYQVLARKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKITYAPPALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIINQDGAALLAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPHPEAETTQTPVQTASAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTA
                     QTSAKSIQTASEAETSPDNQVSKNKAADNETETSLSEVPSENPIQATPNDEAVETEAF
                     AHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADAEEENNADEGSNDENNTPS
                     APPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARATADK
                     KRLDKIRDTLAQAYGLQLTLQTQDWHDESGRETPAMQDKRVQAEDRQKAQALLEADPA
                     AQKILQAFGAQWQPESLELAANRP"
     misc_feature    complement(1769..1808)
                     /gene="dnaX"
                     /locus_tag="WHG62_000926"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            complement(3092..5068)
                     /gene="mutL"
                     /locus_tag="WHG62_000927"
     CDS             complement(3092..5068)
                     /gene="mutL"
                     /locus_tag="WHG62_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ1725058.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELDGGGIRLIHVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTE
                     SVGNAGEVLHDITGVVSTPMPSENDSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMP
                     YQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDIDLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGRLQSQRLLIPVTFAASHEECAALADHADALAGFGLELSDMGGNTLAVRTVPAML
                     GKADVVSLAKDVLGELAQVGSSQTIEEHENRILATMSCHGSVRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            5211..5396
                     /locus_tag="WHG62_000928"
     CDS             5211..5396
                     /locus_tag="WHG62_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ1725059.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            5407..6075
                     /locus_tag="WHG62_000929"
     CDS             5407..6075
                     /locus_tag="WHG62_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ1725060.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIVQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            6075..6791
                     /locus_tag="WHG62_000930"
     CDS             6075..6791
                     /locus_tag="WHG62_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ1725061.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            6840..7325
                     /gene="purE"
                     /locus_tag="WHG62_000931"
     CDS             6840..7325
                     /gene="purE"
                     /locus_tag="WHG62_000931"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ1725062.1"
                     /translation="MTQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEACVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANENPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(7508..8962)
                     /locus_tag="WHG62_000932"
     CDS             complement(7508..8962)
                     /locus_tag="WHG62_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ1725063.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPTEACEII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8959..9660)
                     /locus_tag="WHG62_000933"
     CDS             complement(8959..9660)
                     /locus_tag="WHG62_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ1725064.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(9657..10436)
                     /locus_tag="WHG62_000934"
     CDS             complement(9657..10436)
                     /locus_tag="WHG62_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ1725065.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPNMPRPKHIASFLLERTGGKA"
     gene            10720..12126
                     /locus_tag="WHG62_000935"
     CDS             10720..12126
                     /locus_tag="WHG62_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1725066.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADM
                     NESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDVKGNDTALDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            12238..13764
                     /locus_tag="WHG62_000936"
     CDS             12238..13764
                     /locus_tag="WHG62_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ1725067.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVFRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIESLL
                     "
     gene            13972..14505
                     /locus_tag="WHG62_000937"
     CDS             13972..14505
                     /locus_tag="WHG62_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ1725068.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
     gene            complement(14548..15849)
                     /gene="aroA"
                     /locus_tag="WHG62_000938"
     CDS             complement(14548..15849)
                     /gene="aroA"
                     /locus_tag="WHG62_000938"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ1725069.1"
                     /translation="MTESVRLPVARLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLVDALRIAGADVEYLGKEHYPPLHIGKRQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVIN
                     EGYRVFKIPADARYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQAFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVAEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETAE"
     gene            16241..16717
                     /gene="greA"
                     /locus_tag="WHG62_000939"
     CDS             16241..16717
                     /gene="greA"
                     /locus_tag="WHG62_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ1725070.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
BASE COUNT         3585 a         4575 c         4746 g         4117 t
ORIGIN      
        1 tccgtttttt ccgatagatt cccgtggttt ttcggttact agattcccgc gttcgcggga
       61 atgacggcgg cggggggttc tgttttttcc gatagattcc tgtggttttt cggttactgg
      121 attcccgcgt tcgcgggaat gacggggtgt aagtttctgc tcccacgggg ctggattccc
      181 gttttcatgg gaatgacgaa atttcagacg gcatttaagc ggtacggatg tgtaaataat
      241 ggtagggtgg gcttcagcct gccgattccc gctattcttg ccgtttttgc gttcttatca
      301 ttctcactgt ttttaccgtt cacgccgaat cttgcaaact gatgccgtca ttcccgcgaa
      361 ggcgggaatc cagacccgtc ggcacggaaa tttatcgagt aaaacggttt ctcagattct
      421 acgttctaga ttcccgcctg cgtgggaatg acggtcgggg atcagcggaa gaagtcgccc
      481 actccggggg gtagaccttg cgtgaatgcg cccattgttt tgtttgcggt ttcttcggct
      541 ttgccccggg cggatttgag ggcggcgagg atgaggtctt cgagcatttc tttgtcgtcg
      601 gcggcttctt gaatcaaatc ggggctgatg tcgattttgc gtacttcgtg cgcgcaggtc
      661 attgtgattt tgaccaagcc gttgcctgct tcgccttcga tttcggtttc ggcaagtttg
      721 gcttgcgctt ttttcatatt ttcctgcatt tgctgcgcct gtttcatcag gccgcctaat
      781 ccggcttttc cgaacatact gaatactcct gtctgttttg attgaataag ggaaacggca
      841 atgccgtccg aagggttcgg gcggcattat atctgtttat ggccggtttg ccgccaattc
      901 cagtgattcg ggctgccatt gcgcgccgaa tgcttggagg attttttgtg cggcggggtc
      961 ggcttcgagc aatgcttgtg ctttttgcct gtcttcggct tggacgcgct tgtcctgcat
     1021 tgcgggggtt tctctgccgg attcgtcgtg ccagtcttgg gtttgcaggg tgagttgcag
     1081 cccgtaggct tgggcaaggg tgtcgcggat tttgtcgagg cgttttttgt cggcggtggc
     1141 gcgtgcttcg gcggtcattg ccaaaaccat caggccggtg tcgggatggt attccgtcca
     1201 cgcggagtgt tgcgccggca tttgcgccgc gccgagtttg cgggcgaaat gccggacgat
     1261 ggctgcccag ttttcggtgg aaaactcggg cggcggggcg gacggcgtgt tattttcgtc
     1321 gttgctgcct tcgtcggcgt tgttttcttc ttccgcatcg gcaggggcgg cgtgttccca
     1381 atccggcggc gggatttctg cgccgtcttc cggggggcag tcattatccg gaaagccgta
     1441 accgtagaaa ggttctgcag gggcttcgtg cgcaaatgct tccgtttcaa cggcttcatc
     1501 attcggtgtt gcctgaatgg ggttttcaga cggcacttcg gacaaggaag tctcggtttc
     1561 gttgtcggct gccttgttct tggaaacttg attgtcaggc gatgtttcgg cttcggatgc
     1621 cgtctgaatg ctttttgccg acgtttgcgc cgtgccggct gcggtttggg cttcgtccgg
     1681 cgcgtcttcc caaggcggaa catcgttgtt ttcttgattg gaaacgggtt cggcagtttt
     1741 gctttcagac ggcattgccg ctgcggatgc cgtctgaacg ggcgtttggg tggtttccgc
     1801 ttcagggtgc ggttggggct tttttgcggc ggtttccttt tcggcggttt gtgccgatgg
     1861 ggattgaagt tcggtatttt caatcacggc gtttgcatca cacgatgctg ctgccaaggg
     1921 cgcaaacgcc agcatacgca gcagggtcat cataaagccg gcgtattcgt cgggggcgag
     1981 gcccaggtcg cgtttgccgt ggacggcgat ttggtagtaa agctggattt gttcgccgct
     2041 tatggtttgg gcgaggcggt gcaaaatatc ggaatcgggg tcgtcgtgcg ccaaggcatt
     2101 cggcactgct tgtatcaggg cgaggtgttg cagcagtatg gcgagttcgc ccaaggcgtt
     2161 gtcaaagccg acggcacacg ccgccatttc ctgcgctttg gcgagcaggg ctgcgccgtc
     2221 ttggttgatg atgcctgtca gcagttcgta aaggtattgt ttgtcaaccg cgccgatcat
     2281 ttggcggaca tcgttttcgg caactttgcc cgaacctagg gcgatggctt ggtcgagcag
     2341 gctcaaggca tcgcgcatcg atccggcggc ggcgcgtccc aaaagttgca gggcgggggg
     2401 ggcgtaggtg attttttcgc tgtcgaggac gtgggcgagg tggtcggcaa cctgctgcgc
     2461 ggtcatattg cgtaagacaa attgcaggca gcggctcaag acggtaacgg ggactttgtg
     2521 cggatcggtc gtggcaagga tgaatttgac gtgttcgggt ggctcttcca gcgttttgag
     2581 catagcgttg aacgcgcttt tggaaagcat atgcacttcg tcgatgatat agactttgta
     2641 tttgccggcg gtcggcgcgt attgggcgtt ttccaatact tcgcggatgt tgtcgatgcc
     2701 tgtgttggaa gcggcatcga tttccaataa atctacatag cgtccggcat cgatttgggt
     2761 gcagctttgg cacacgccgc aaggttcgcc gtgttgcgcg ttttcgcagt tgaggctttt
     2821 ggcaaggatg cgggcgatgg tggttttgcc cacgccgcgc gtaccggtca gcaggtaggc
     2881 gtggtgcagc ctgccttcgt ccaaggcatt ttgcagggct ttgacgacgt gttcctgacc
     2941 gactaagtcg gcaaaggttt tgggccgcca ttttcgggcg agaacttgat aggccatatt
     3001 tttctcttgg tttcggtcgt gatgtttctg tcggtgcgtc ggaatgccgt ctgaacggcg
     3061 gtctcgggcg gcgtattcta gcactttcgg tttattgtcc gcgcaagaac agtgcgtcca
     3121 attctttcaa agtcagtttg acccaagtcg gcctgccgtg gttgcattgg ttgctgcgcg
     3181 gcgtgttttc catatcgcgc agcagcgcgt tcatttccgg cagggtaagc cggcggccgg
     3241 cgcggacgga gccgtggcag gacatagtgg cgaggatgcg gttttcgtgt tcttcgatgg
     3301 tttggctgct gccgacttgg gcgagttcgc ccaatacgtc tttggcgagt gagacgacgt
     3361 cggctttgcc gagcatggcg ggaactgtgc ggacggcaag ggtattgccg cccatgtcgg
     3421 acagttccaa gccgaagcct gccagtgcat cagcatggtc ggcaagggcg gcgcattctt
     3481 cgtgggacgc ggcaaaggtt acgggaataa gcaggcgttg gctttgcagc ctgccgtttt
     3541 cctgacgttg gcgtttcatt ttttcgtagt tgacgcgttc ggcggcggcg tgcatatcga
     3601 tgagcagcag gctgtcttcg gcttgggcaa gaatgtagat gcctaatagt tgggcaatgg
     3661 caaaaccgag cggcggcagt tcggattggg acgggatgcc gtctgaaagc ggcgtatctg
     3721 tttggggagc aggcgtttca gacggcatat tgccgaaacg tgcctgctcg aatcggctta
     3781 actcaaggtc gatgtcgtcg gtttttttgt aaagttcggc gtaagtattc attgccgcgc
     3841 ggctttcgcg cagggacagg ctgcgttgtt gcggcgcata tgcggactga tagggcatgg
     3901 gcgcggtttt gcctgatgaa ccaaaggcat tgtgtgtatc tgatttgttg cctgtcgggt
     3961 agttggatac gctatcaaac agattttcgc tgtcgttttc agacggcatt ggggtggaga
     4021 caacgccggt aatgtcatgc aacacttcgc ctgcgttgcc gacgctttcg gtcaggttgg
     4081 cgcgtgtgtc ggcaagggct ttgttgagcg tgtggaacac aagttggtgc acctgctgac
     4141 tgtcgcggaa gcggatttcg gttttggtcg ggtggacgtt gacatccacg gcttcgggcg
     4201 gcaggtcgag gaagaggacg aaagcagggg tgagggcgtt gtgcaatacg tcgcggtatg
     4261 cctgtttgac ggcgtggagc atcactttgt cgcgcacgaa gcgatggttg acgaagcagt
     4321 attgtttgtc ggttttacct ttggcgaaag tcggtttggc aatcgcacca tagagccgca
     4381 gcgcgccgct gccgctgtcg atttccaatg atgccgtctg aaaatcatcg ccgacaatgg
     4441 cggcgatacg ttcatgcagg ctttgtgcag ggagtttgaa cacttgtttg ccgtcgcgtt
     4501 tgagcgagaa ggcaatgtgc ggatgcgcca gcgcgaggcg ttcgagcatg gtggcgcagt
     4561 gggcgtattc ggtgttttcg gatttgagga acttgcgccg cgcgggagtg ttgaagaaga
     4621 gttcggcggc ttcgatggtg gtgccgacgg ggtgggtggc ggcggtgggg ctgctgagtt
     4681 tgccgtcttc ggctttgact tgggttgcgt gcgaactgtc ttcttggcgg ctggtcaggg
     4741 tcaggcggct gacggaggcg atgcttgcca agccttcgcc gcgaaagccc atgctggcaa
     4801 cgtgttccaa atcgtttaag gttttgattt tgctggtggc gtggcggtgg agcgcaagtt
     4861 cgatgtcgtc cggatggata ccgccgccgt tgtcgctgac gtgaatcagg cggatgccgc
     4921 cgccgtccag ctcgacatca atcgccgttg cgcctgcatc gatactgttt tcaacgattt
     4981 ctttcaaggc gttggcaggg cgttcgacta cttcgccggc ggcgatttgg ttgacgagat
     5041 ggtcgggcag ggcggcaatg cgtggcataa ggtaggcttc cgttgcaaaa acgctttatt
     5101 ctataataaa accccttact tttctgcctg tattcttgat aaaagccgtt tatcccgttt
     5161 ggaaaatacc agtataatca cgccgtatcc cgtaaaattg gagcgcaaag atgtatcact
     5221 accaatccga agccacacaa ttcctcaacc gtctgattga agaaaaacct gagttggaac
     5281 agcagcgttt ggaaaaccgg gggcttttgt gggatgtcga actcaatccc gaagaacagg
     5341 aaaacttcga ggcggcaaaa gtagcgaaaa aaccttatac ctattaccaa gactgaaccc
     5401 gccgaaatga cgacccatct gtccaatgtc gcccccgacc tgcaaaacta tttgaacgcc
     5461 atcggcgaac ccgaacatcc cgttttgacg cggctgcgtg agaagaccga gcatcaccgt
     5521 atgggcaaaa tggcgattgc gcgcgaacag gcggcggttt tggtttggct ggcaaagctg
     5581 attcgcgcgg aaaaatatct ggaagtcggc gtgtttaccg gatacagcag caccgcgctt
     5641 gcattggcgt tgccagaaca cgggcggatt accgcctgcg acatcaatgt aacctttacc
     5701 gatacggcgc gtcaggtttg gaacgaggca ggtgtggcac ataaaatcag cctgcacctg
     5761 caacccgcat tgctgacatt ggatgatttg attgtacagg gtgaagccgg aagctacgat
     5821 ttggcactga tagacgcaga caaaccgccc acgccgcaat atttcgagcg ttgcctcaaa
     5881 ctcgtccggc aaggcggcat cattgccatt gacaatattt tgttgaacgg aagggtgatg
     5941 cgcgaagcgg cttccgacgc gccgcccagt gtcggcatcc tcaaagattt caatcaaaac
     6001 ctgccgaacg acccgcgcat cgtccccatc accctgcccg tcggcgacgg tttgaccctg
     6061 cttctgaaaa aataatgaag accaaattac cgctttttat catttggctg tccgtatccg
     6121 ccgcctgttc ttcccctgtt tcccgcaata ttcaggatat gcggctcgaa ccgcaggcag
     6181 aggcaggtag ttcggacgct attccctatc ccgttcccac tctgcaagac cgtttggatt
     6241 atctggaagg cacactcgtc cgcctgtcga acgaagtgga aaccttaaac ggcaaagtca
     6301 aagcactgga gcatgcgaaa acacaccctt ccagcagggc atacgtccaa aaactcgacg
     6361 accgcaagtt gaaagagcat tacctcaata ccgaaggcgg cagcgcatcc gcacataccg
     6421 tcgaaaccgc acaaaatctc tacaatcagg cactcaaaca ctataaaagc ggcaggtttt
     6481 ctgccgctgc ctccctgttg aaaggcgcgg acggaggcga cggcggcagc atcgcgcaac
     6541 gcagtatgta cctgttgctg caaagcaggg cgcgtatggg caactgcgaa tccgtcatcg
     6601 aaatcggagg gcgttacgcc aaccgtttca aagacagccc aaccgcgccc gaagccatgt
     6661 tcaaaatcgg cgaatgccaa tacaggttgc agcagaaaga cattgcaagg gcaacttggc
     6721 gcagcctgat acaggcttac ccgagcagcc cggcggcaaa acgcgccgcc gcagccgtac
     6781 gcaaacgata gtttttccat ttttccgctt tttaccccat ccgcaccaag gagagattta
     6841 tgacacaaat cggcatcatc atgggcagca acagcgattg gcccgttatg cggcaggcag
     6901 cgcagtttct tgaagagttc ggcgtagaat atgaggcgtg cgtcgtttcc gcacaccgca
     6961 ctccggattt aatgttccaa tacgccgaaa ccgcacgggc gcgcggcatc aaagccatca
     7021 tcgcgggtgc gggcggcgcg gcgcatttac ccggcatggt tgccgccaag accaccgtcc
     7081 ccgttttggg cgtacccgtc cccagcaaat acctgcgcgg cgaagattcg cttttatcga
     7141 ttgtacaaat gcccaaaggc gtacccgtcg ccacattcgc catcggcgag gcaggcgcgg
     7201 caaatgccgc attgttcgcc gtttccatgc tggccaacga aaaccccgaa ctggcgcaaa
     7261 aactggcaga cttccgagcc aaacaggaac aggctgtttt gagtatggaa ttggaacaga
     7321 tttaaaaccc gccgtccgcg aatatatagt ggcttaaatt taaaccagta cggcgttacc
     7381 tcgccttgcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta
     7441 atccactata caaatgccgt ctgaagccct gtttcgggtt tcagacggca tttttgcaaa
     7501 caactgttta tgcctgttct ttttggcgca ttttttctgc catcagttcg tgcagggttt
     7561 tcttcgccgg tttcatcggc acgcggtttt gcgtccaacc caactgtttg cgcggggtca
     7621 ggttgcggaa cttggtggct gcccaaccga aggcgcggta ggttttgctg ccgctgaaaa
     7681 taccgttgaa tgtgcgccac gccatttgtt cgccgaaggt atgcgatgcg ccttgccctc
     7741 ggatggggtg cggcacggtt tcggtcggcg aacgttgcgc ttcaacgcgc aaacgctgca
     7801 tttgttcggt aatcgggatg cgtaccggac agacttccac acacgcaccg cacatggtac
     7861 aggcggttgg cagatcgcgg gtggcatcca gacccaacag gtgaggggaa ataatctcgc
     7921 caatcgggcc gggataggtt gtgccgtatg ccgcgccgcc gatgcgggta taaaccgggc
     7981 aatggttcat acacgcgccg caacggatac attgcagggt gcggcgcatt tggtcttcgg
     8041 cataagcctg gctgcggccg ttgtcaagca gaaccaagtg catttcttgc ggaccgtcta
     8101 attcttcact gcggcgcggg ccggtaatca tattgaaata ggttgtgatg ttttgaccga
     8161 tggcggagcg cggcagcaga ctgtacaagg gtgggatgtc ggacaatttc gccaccactt
     8221 tttcaatgcc ggtaatagcg atatgcacgg gcggtacggt ggtactcaag cgaccgttgc
     8281 cctcgttttc caccagacac agcgtacctg tttcagcaac ggcaaagttt acgccactca
     8341 aaccgacatc ggcagtgctg taaatatcgc gcagtgcttt acgggcgaag ccggtcagtt
     8401 ggtctacatc gtctgtcagc ggcgtaccga ggttttggtg gaacagttcg ctaacctgtt
     8461 ctttggtttt gtggatagca ggcatcacga tatgggtcgg tttttcacct gccatttgga
     8521 cgatgaactc gcccaagtcg ctttctaccg ctttaatgcc ttttgcttca agataatggt
     8581 tcagctcgat ttcctcgctg accatggatt tacctttgac catcagcttg ccgtttttgg
     8641 ctgtgatgat gtcgtggatg atttcgcagg cttcggtcgg ggtttctgcc cagtgcactt
     8701 tcacgcccag cttagttagg ttttcttcca gctgctccag cagggcaggt aatttagaca
     8761 atgaacgctg acggacgtgt tcgcacaaat cgcgcaggct ttgcagctct tcttcgtcgg
     8821 tcaaaacggc tttgcgtttg gtcatcagca tatccatcgc ggtacgcagg cttttgcgca
     8881 aaggcttgtc ttgaagggaa attgcggcgt tttgcttgaa agtttccggc ttcatgtgaa
     8941 atttgatggt ttgcgtagtc atgcgttttc ctccaaatcg gcaggggaaa tgtggtcggg
     9001 caggatggcg aggatgacca aatcgcgcgg gccgtgcgcg ccgtaagcaa gcgtcagttg
     9061 gatgtctgcg gttttggacg ggccggaaat caggaataca ttggtcggca taccgttttc
     9121 caccagtttt tcgccttcga cggcattatg aaactcgttg tacatcttgg acgtatcgaa
     9181 caggcagaaa tgcacgggag gaacgaggct taaagtacgc ggctcttcgg ggctggaaaa
     9241 cagcatcagc gtgccggtgc gggcgatgcc gcattgcgcg ccgctgaagc ccgcatcgat
     9301 gttcgtgaaa aactcggttt tccaagtatc gatttcgcgc tcgaaggcaa tcggttcgat
     9361 attgctgtcc gccaatgcgg cacgggcaat ttgtccgtgt tcggtcgcca agggcagcag
     9421 gatgtttttc aaacccttgc cttctgccgc ttcgcggaaa acctgcatcc aattgctttt
     9481 cgtcacccaa taaatttcgg ttttgaccgc acgcatagcg gcagcccaat gtttcagacg
     9541 ctcaacttcg ctgccccaag aaacacccat ttcacggtaa taatcaaaaa ccgcaggttc
     9601 ttccatcggc aatgcgtcgg cttttttcag ttttgccaaa atattttcgc gcgcgctcat
     9661 gctttgcctc cggtacgttc caacaagaag gatgcgatat gtttcggacg cggcatattc
     9721 ggttcgtcct tagcaatttt gccgccgatg ttcatcatac agccgcagtc cgcgctgatg
     9781 atttcggttg cgccggtttc tttcagcgcg gcgactttgt cggttaccat cgcgccggaa
     9841 atatcggctt gtttgacgga gaatgtgccg ccgaagccgc aacattcgct ttcgtggtcg
     9901 tggacgatgc gttcgacgtt ttccataccg tcaatcagtt gccagcccga gagatggaca
     9961 ttcatttcgc ggcgggcggc gcaggaagtg tgaacggcga ctttgagcgg ttcgcccttg
    10021 tcttcgggtt tgaaaccgat ggcaagcagg aaatgggtaa actcgatgat gcggccggcg
    10081 caatccacag ccctttcctc gtactcgctg cctttaaaca gcgtcggcca atggtgcttc
    10141 atcataccgc cgcacgaacc ggacggtacg acaatcggcc actcctcggg gaaaaggtcg
    10201 agttgcgctc tggcgacatc aaaggcttcg gtcggatggc cggatgaata ggcgggctga
    10261 ccgcagcagc tttgcgccat cgggaaatgg acgcgtatgc cctgttgctc gattagggta
    10321 atggcatcca tgcctgcttc gggcataaaa agatcaagga cgcaagtgcc gaaaaaatag
    10381 acatcggtcg gattgctgtc gtatcggatg atttttgggg gaatggttgc gctcatgttt
    10441 tttgataacg ggaaacccgt ttttttctgt agaaaggtaa gcgtttactt taagtaattg
    10501 actgttgcgg gtcaagtcta attttaaaaa ataatccggt ttttcttaca aactacccca
    10561 taacgcttac tgtaccttaa tctgatagtt ttcgataata attatcatta caatgcaatg
    10621 ccggttcgtt tgcttgtgaa cattcaagat gccgactctg acggcattca gacagcatct
    10681 gaaaacaata acggcacaag gatggggtac aatcgctcta tggaaaaaaa caccctatcc
    10741 gcccgcgcac catccccttg gctgccgctt ctgctggcaa ttgccatttt tatgcagatg
    10801 ttggatgcga ccattttaaa taccgcactg cctgaaattg ccgccgacat gaatgagtcg
    10861 cctctggata tgcaactggc agtcgttgcc tatacgctga cggttgccct gctgattcct
    10921 ttgagcggtt atttggcgga caggttcgga acgaaaaaag tctttttcgg ttcgattgcc
    10981 gtttttatgc tcggatcggc attgtgcgcc gcatcgggtt cgctgtttga attgacgctt
    11041 tcccgtgtcg ttcagggcat cggcggttcg atgctggttc cgataccgcg tctgaccatc
    11101 ttgcgtgtgt acgacaagtc caagctgctc aacgccatca attatgcggt catgcctgca
    11161 ttaatcgggc cggttttagg gcctttggcg ggcggttatt tggtcgaata cgcttcgtgg
    11221 cactggattt tcctgctcaa cctgcccatc ggtctgctgg gtttcatatt gggacgcaac
    11281 atcatgcccg atgtcaaagg caacgatacc gctctggatt tcaaaggcta tctgattttt
    11341 tctgccgccg cgtgcctctt gttactttcg gcagaaagcc tgtcgcacgc gctgcctccg
    11401 tattttgcac tgttgccgct gtgcggcgga ctgctgtttg cacgccgtta tttccgacat
    11461 atgaaaaccg cgtccaaacc gatttattcc gccgacctgt ttctgatacg cactttccgt
    11521 ctgggactgg cgggcaatct gttcagccgt ctcggcatca gctcgattcc ttttctgatg
    11581 cccctgatgt ttcaagtcgc tttcggcttc ggcgcaagcc tgtcgggttg gctggtcgcc
    11641 cccgtcgccc tgtcttcgct gctggtcaaa ccgctgattg caccgctcat gaaacgtttc
    11701 ggctaccgca cggtactgct ttggaacacc aagctgcttg ccgccttcat catgctgctc
    11761 gccctgcctg acggaaactc gtcgctgtgg atttggattt tcctctcgct ggcgatcggc
    11821 gcgtgcaact ccctgcagtt ttctgccatg aatacactga ccctcgccga tttgcgcccg
    11881 caacagaccg gcagcggcaa cagcctgatg gcggtcaacc aacagcttgc catcagcatg
    11941 ggcattgttg tcggcgcatt aatccttaaa aactggacat ttctgatacc ggcttcttca
    12001 ggtctgcatt ccgccttccg tatgaccctg ctcagtatcg gcggcatcac ccttgcctcg
    12061 tcgttggttt tcaagcgtct gcacgtttca gacggtgcaa acctgacacg gaacacaccg
    12121 tcctaaagcg gtccgcacgc aaaactttta cccgtttcaa cgtttggatt atgattccgc
    12181 acttccatgc gcgccaaccc caaaacacag gcaatgccgt ctgaaaccat atccctgatg
    12241 aaaacacgca gcctaatttc ccttttatgc ctccttctct gttcatgttc ttcatggttg
    12301 cccccactgg aagaacggac ggaaagccgt catttcaata cttccaaacc cgtccgcctg
    12361 gacaacatcc tgcaaatccg gcacacccct cataccaacg ggctatccga tatctatctg
    12421 ctgaacgacc cccacgaagc ctttgccgcc cgcgccgccc ttatcgaatc tgccgaacac
    12481 agcctcgatt tgcaatacta catctggcgc aacgacattt ccggccgact gctgttcaac
    12541 ctcgtgtacc ttgccgcaga acgcggtgtg cgcgtacgcc tgctgttgga cgacaacaac
    12601 acgcgcggat tggacgacct cctgctcgcc ctcgacagcc atcccaatat cgaagtgcgc
    12661 ctgttcaacc ccttcgtctt ccgcaaatgg cgcgcactcg gctacctgac tgacttcccc
    12721 cgcctcaacc gccgcatgca caacaaatcc tttaccgccg acaaccgcgc caccatactc
    12781 ggcggacgca atatcggcga cgaatacttc aaagtcggtg aggacaccgt tttcgccgac
    12841 ctggatatcc tcgctaccgg cagcgtcgtc ggcgaagtat cgcacgactt cgaccgctac
    12901 tgggcaagcc attccgccca caacgccacg cgcatcatcc gcagcggcaa catcggcaag
    12961 ggtcttcaag cactcggata caacgacgaa acgtccagac acgcgctcct gcgctaccgc
    13021 gaaaccgtcg aacagtcgcc cctctaccaa aaaatacaga caggacgcat cgactggcag
    13081 agcgtccaaa cccgcctgat cagcgacgac cctgcaaaag gactcgaccg cgaccgccgc
    13141 aaaccgccga ttgccgggcg gctgcaagac gcgctcaaac agcccgaaaa aagcgtctat
    13201 ctggtttcac cctatttcgt ccccacaaaa tccggcacag acgcactggc aaaactggtg
    13261 caggacggca tagacgttac cgttctgacc aactcgctac aggcgaccga cgttgccgcc
    13321 gtccattccg gctatgtcaa ataccgaaaa ccgctgctca aagccggcat caaactctac
    13381 gagctgcaac ccaaccatgc cgtccctgcc acaaaagaca aaggcctgac cggcagctcc
    13441 gtaaccagcc tgcacgccaa aaccttcatt gtggacggca aacgcatctt catcggttcg
    13501 ttcaacctcg acccccgttc cgcacggctc aacaccgaaa tgggcgttgt tatcgaaagc
    13561 cccaaaatcg cagaacagat ggagcgcacc cttgccgata ccacccccga atacgcctac
    13621 cgcgttaccc tcgacaggca caaccgcctg caatggcacg atcccgccac ccgaaaaacc
    13681 tacccgaacg aacccgaagc caaactttgg aaacgcatcg ccgcaaaaat cctatccctg
    13741 ctgcccatag aaagtttatt atagaaatat agcggattaa caaaaaccag tacgacgttg
    13801 cctcgcctta gctcaaagag aacgattctc taaggtgctg aagcaccaag tgaatcggtt
    13861 ccgtactatt cgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta
    13921 taccgtctga aacaccttca gacggatatc cgaacccgca aaggaaaaac catgtttccc
    13981 cccgacaaaa cccttttcct ctgtctcagc gcactgctcc tcgcctcatg cggcacaacc
    14041 tccggcaaac accgccaacc gaaacccaaa cagacagtcc ggcaaatcca agccgtccgc
    14101 atcagccaca tcgaccgcac acaaggctcg caggaactca tgctccacag cctcggactc
    14161 atcggcacac cctacaaatg gggcggcagc agcaccgcaa ccggcttcga ttgcagcggc
    14221 atgattcaat tcgtttacaa aaacgccctc aacgtcaagc tgccccgcac cgcccgcgac
    14281 atggcggcgg ccagccgcaa aattcccgac agccgcctca aggccggcga cctcgtattc
    14341 ttcaacaccg gcggcgcaca ccgctactcg cacgtcggac tctacatcgg caacggcgaa
    14401 ttcatccatg cccccagcag cggcaaaacc atcaaaaccg aaaaactctc cacaccgttt
    14461 tacgccaaaa actacctcgg cgcacatact ttctttacag aatgagccgc ccgccgcgcc
    14521 gcgccggaat cgcggcaaaa tgccgcctta ttccgctgtt tcggtcagcg atgagaacac
    14581 gtcgaaataa gtcgggaagg ttttgtgggt gcatttcgga tcgttgatga cgacgggtac
    14641 gcccaacagc gaaaccagcg agaaacacat tgccatgcgg tggtcgtcgt aagtgtcgat
    14701 gacggcgtcg ggtgtcggcg tttcgggcgg ggtgatgtga attgcttcgg cttcttcggc
    14761 gacttttgca ccgagtttgc gcaactcgtt cgccattgcg gcaatgcggt cggtctcttt
    14821 gacgcgccac gaaccgatgt tgcgaagcgt gcaggtttgc cctgtagcaa gcgcgacgat
    14881 ggcgagggtc atggcggcat cggggatatg gtttgcatcc aaatcaaagg cttggacggc
    14941 acgttctttc gggcgcgaga cttcgacgaa gttttcgccc caaaccacgt ccgcaccgat
    15001 tttttccagc tcgcgggcaa aggcgacatc gccctgtatg ctgtttgcgc cgataccggt
    15061 aacgcggacg ggcgtggcgg caatcaaacc ggctgcgagg aagtaggacg cgctggaggc
    15121 atcgccttcg acgtgcaagt gttcgggcgc gtggtagcgc gcatcggcgg gaattttgaa
    15181 gacgcggtag ccttcattga taacctgtac gccgaattgc gccatcagtt ttaaagtaat
    15241 gtcgatatag ggcttggaaa ttaactcgcc gaccatacgg atttcaaacg cctgcccggt
    15301 cagcggcaac gccattaaaa gggcggtcag aaactggctg gacacattgc ctttaatcgg
    15361 aatcacgcgt tcgccgttgt cttgacgttt gccgatatga agcggcggat agtgttcctt
    15421 gccgagatat tcgacatcgg cgccggcaat ccgcagcgca tcgaccaaat cgccgatagg
    15481 acgttcgtgc atacgaggca cgccgtgcag atgataatcg ccgcccaaaa cggcaagcgc
    15541 ggcagtcagc ggacggaacg ccgttcccgc gttgcctaaa aacaaatcgg cagtgcggtt
    15601 ggggaagcgt ccgcctgtgc cgtgcacttt cagacggtct tcggcaagat attcgatttc
    15661 aacgccgagt ttatcgagtg cttcgagcat acggtcagta tcgtcggatt tgagcaggga
    15721 atggatttcg caagcattgt cggacaaggc ggcgagcagc agggtgcggt tgctgatgct
    15781 tttggagccg ggcagggcga cggtggaagg tttgaggcgg gcgacgggga ggcggacgga
    15841 ttcggtcatg gcaaaacgta aatataaaga taaaaacagc ctgcattata ctggtgcaaa
    15901 tgccgtatga aaaatctcag gtttggcatt ttcggtttta aagtccgtaa atgtggtttt
    15961 ttatgccgaa aattgattat ttttaaattt tttgtttcta aaatttcttt gtcggcatat
    16021 tttcagcttt tgttgcggac atggcgcgtt tgccggcggc gcggcacgat tgccaatttc
    16081 atagaatttg gtagaatagc cgctgttcaa cgacagacaa gccgccgatt ttccgggcgg
    16141 cttgtatttt tattttaata tccggacgca caaaacaaga cggtacgcgg tatgcttgct
    16201 gccgcaaaac ggtgtgccgg aatatggaga aaaaagaccg atgcaaaaaa tccccctgac
    16261 cgtacgcggt gcggaattgc tgaaacagga attgcagcag ctcaaaagcg tggcgcgtcc
    16321 cgaagtgatc gaagcgattg ccgaagcccg ttcgcacggc gatttgtccg aaaacgccga
    16381 atacgaagcc gccaaagaac gccaaggctt tatcgagggc cgcatttccg agctggaaca
    16441 caaactttcc gttgcccaca tcatcaatcc gaccgaaatc cacgccgaag gcaaaatcgt
    16501 gttcggtacg acggttacgc tggaagattt ggaaacggaa gaacacgtta cctatcaaat
    16561 tgtcggcgaa gacgaagccg acatcaaaca gggcaaaatc tatgtcggct caccgattgc
    16621 ccgcgcctta atcggcaagg aagagggcga tacggcggaa gtccaagccc cgggcggcgt
    16681 gcgcgaatac gacattatcg aagtccgata tatttgattc ggcttgattt cgatacaccc
    16741 gacacacgca ggaaattata gtggattaat aaaaatcagg acaaggcgac gaagccgaag
    16801 acagtacaga tagtacggaa tcgattcact tggtgcttga gcaccttaga gaatcgttct
    16861 ctttgagcta aggcgagaca accccgtact ggtttttgtt catccactat aacagcaacc
    16921 ctgtcgccgt cattcccgca aaagcgggaa tctaggacgc agggttaaga aaacctgcat
    16981 cccatcattc ctcaaaaaca gaaaaccaaa atcagaaacc taa
//
LOCUS       DAWGBY010000033        16935 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.033, whole genome shotgun sequence.
ACCESSION   DAWGBY010000033 DAWGBY010000000
VERSION     DAWGBY010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16935
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.033"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            154..327
                     /locus_tag="WHG62_000940"
     CDS             154..327
                     /locus_tag="WHG62_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ1725071.1"
                     /translation="MKSERRHWEWCVDYDGEGVVRDYRFTHKVEKDERSVIRDTVDVI
                     RKEAGKSLAKPEK"
     gene            390..1673
                     /gene="hemL"
                     /locus_tag="WHG62_000941"
     CDS             390..1673
                     /gene="hemL"
                     /locus_tag="WHG62_000941"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ1725072.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVETVREAALGGLSFGAPTEGEIVIAEEIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPTEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIQREGFYENLTARTEQLVQG
                     FQTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIEGFKQFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELINETVAVAVEVFKAMAA"
     gene            complement(1889..2161)
                     /locus_tag="WHG62_000942"
     CDS             complement(1889..2161)
                     /locus_tag="WHG62_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HEZ1725073.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAHVAIRFF"
     gene            complement(2172..2735)
                     /gene="orn"
                     /locus_tag="WHG62_000943"
     CDS             complement(2172..2735)
                     /gene="orn"
                     /locus_tag="WHG62_000943"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ1725074.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2753..3640)
                     /gene="prmA"
                     /locus_tag="WHG62_000944"
     CDS             complement(2753..3640)
                     /gene="prmA"
                     /locus_tag="WHG62_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ1725075.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGETLEDQDWVR
                     LTQAQFDPIQISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            complement(3758..5119)
                     /gene="accC"
                     /locus_tag="WHG62_000945"
     CDS             complement(3758..5119)
                     /gene="accC"
                     /locus_tag="WHG62_000945"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ1725076.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5231..5686)
                     /locus_tag="WHG62_000946"
     CDS             complement(5231..5686)
                     /locus_tag="WHG62_000946"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ1725077.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5668..5925)
                     /locus_tag="WHG62_000947"
     CDS             complement(5668..5925)
                     /locus_tag="WHG62_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ1725078.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6042..7082
                     /gene="queA"
                     /locus_tag="WHG62_000948"
     CDS             6042..7082
                     /gene="queA"
                     /locus_tag="WHG62_000948"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ1725079.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LQDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATSRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
     gene            complement(7556..8134)
                     /locus_tag="WHG62_000949"
     CDS             complement(7556..8134)
                     /locus_tag="WHG62_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ1725080.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYIDEVLTAGHGKLYQSDGRHRVN
                     PTEGYGTGGLLQGKKHMLSLTWNAPIEAFTREGDFFEGKGVDVLYMHFHKANEFLGMT
                     RLPTFLCNDVVKNPQVEKYLADYQAHLEKVFG"
     gene            8373..9272
                     /gene="crgA"
                     /locus_tag="WHG62_000950"
     CDS             8373..9272
                     /gene="crgA"
                     /locus_tag="WHG62_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ1725081.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPSSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(9496..12711)
                     /gene="carB"
                     /locus_tag="WHG62_000951"
     CDS             complement(9496..12711)
                     /gene="carB"
                     /locus_tag="WHG62_000951"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ1725082.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLVKEEQQVSAGCLQDLDFAALRRLKRKGFSDKRIAQLLGVKEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(12751..13362)
                     /locus_tag="WHG62_000952"
     CDS             complement(12751..13362)
                     /locus_tag="WHG62_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725083.1"
                     /translation="MINIIATWAMALTYIFLLLFIIVFIPIQLYLENIKKKKFKSRII
                     DILKNNHNNLDLNDIKQMTEAVNLNNFAARKIIKQLYYTDELNLNLVRQLQKEIQQEE
                     PFDGCSDELKPTLIGINELLETHGSESQKHLLTPIISELKELNQIKHDHKKMKTQSYI
                     AYIIAIISFFIGSISFYYTITAPSGKEIANTVVEQLKANQNQQ"
     gene            complement(14210..14599)
                     /locus_tag="WHG62_000953"
     CDS             complement(14210..14599)
                     /locus_tag="WHG62_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ1725084.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHAEQAVYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLAEILLVLQELEKQAAR"
     gene            complement(15172..15297)
                     /locus_tag="WHG62_000954"
                     /pseudo
     CDS             complement(15172..15297)
                     /locus_tag="WHG62_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687282.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(15343..16476)
                     /gene="carA"
                     /locus_tag="WHG62_000955"
     CDS             complement(15343..16476)
                     /gene="carA"
                     /locus_tag="WHG62_000955"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ1725085.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNQTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         3669 a         4292 c         4703 g         4271 t
ORIGIN      
        1 acggaagagg gaatcgcaca aacggttgtt aaaggcaaaa cgacccgggc ggaggtagag
       61 gcacgtttcg ggaagcgcaa tcctttcggc tgttatgcct atcatgaagt cagcctgccg
      121 atttataatt ttctgccgac caatttcatt tatatgaaat cggagcggcg gcattgggag
      181 tggtgtgtgg attacgacgg ggagggagtt gtccgggact accgctttac acataaagtg
      241 gaaaaagacg agcgttccgt catcagggat acggttgacg tcatccgcaa agaagcaggc
      301 aaatccttgg cgaaacctga aaaatgataa aatagctttt ctatttcaga acctaaaacc
      361 tgcttttagg atggaattta aggatatata tgaaccgtaa cgaaatttta ttcgaccgcg
      421 ccaaagccat catccccggc ggcgtgaatt cccccgtccg cgcattcggc agcgtcggcg
      481 gcgtaccgcg ctttatcaaa aaagccgaag gcgcgtatgt ttgggacgaa aacggcacgc
      541 gctataccga ttacgtcggc tcgtggggac ctgcgattgt cggacacgcg caccccgaag
      601 tcgtcgaaac cgtacgcgaa gccgcattgg gcggtttgtc gttcggcgcg cctaccgaag
      661 gcgaaatcgt cattgccgaa gaaatcgcca aaatcatgcc gtccgtcgaa cggctgcgcc
      721 tcgtcagctc cggtaccgaa gcgaccatga ccgccatccg tctggcacgc ggttttaccg
      781 ggcgtgacaa aatcatcaag tttgaaggct gctaccacgg gcattccgac agcctgctgg
      841 tgaaagccgg cagcggcctg ctgacgtttg gcaacccgtc ttccgccggc gtgcctgccg
      901 actttaccaa acatactttg gtactcgaat acaacaatat cgcccaactc gaagaagcct
      961 ttgctcaaag cggcaatgac attgcctgtg tgattttgga gcctttcgtc ggaaatatga
     1021 acctcgtccg tccgaccgaa gcctttgtca aagccttgcg cgaattgacc gaaaaacacg
     1081 gcgcggtatt gatttacgac gaagtgatga ccggtttccg cgtcgcgctc ggcggcgcgc
     1141 aatctttgca cggcatcacg cccgacctga ccacgatggg caaagtcatc ggcggcggta
     1201 tgccgcttgc cgcgttcggc ggccgtaaag acattatgga atgtatttcc ccgttaggcg
     1261 gcgtgtatca ggcaggcacc ttgtcgggca acccgattgc ggttgcggcc ggtttgaaaa
     1321 cgctggaaat cattcagcgc gaaggcttct atgaaaacct gacggcgcgt accgaacagt
     1381 tggttcaagg ttttcagacg gcagcggatg cggcgggcat cgagttcacc gccgacagcg
     1441 tgggcggtat gttcggtctg tatttcgccg cacacgcgcc gcgaaactat gccgatatgg
     1501 cgcgttccaa tattgaaggc ttcaaacagt ttttccacgg gatgctcgac cgcggcattg
     1561 cctttggccc gtccgcttat gaagcaggtt tcgtttccgc cgcgcatacg cccgagctga
     1621 ttaacgaaac ggttgcggtt gcggttgaag tgttcaaggc gatggctgca tgatgttttg
     1681 acggacagag tttctctgtt cgatttgttt ggcagattga agtaagaatg cacaccgccg
     1741 tcattcccgc gcaggcggga atccagacct ttcagtttct gtaatgattg aaaataacgg
     1801 gccgaaatca gccgcgcccg gcaggaagcc gccgccacct gaaacaatgc cgtctgaagc
     1861 cttcagacgg cattttatcg gaagcgcatc agaaaaaacg gatagcgaca tgtgcggtaa
     1921 aagcaagggc aattacatag ataaacccct ttataaattc aaaagtctca tctatatcgc
     1981 tatatttttc tttcagttcg tcagattttc gataacgttt cattttcaag accacttcat
     2041 gaccaacaag cccgaccttc cggattcccg cctgcgcggg aatgacgggc gtgtatattt
     2101 ttgatttcaa tctgctgtaa aaatgccgtc tgaaatgcag gatttgcgct tcagacggca
     2161 ttttttgttt cttattgcgc ttcggctctc ggggcggaaa tcagaaagtg ttcgcggtag
     2221 tggcgcattt cttcgatgct ctccaaaatg tcgtccaatg ccttgtgcga accgcgtttg
     2281 acgacgcttt tggcaacggg cggattccag cgtttggcaa gctctttcag tgtggaaacg
     2341 tcaaggttgc ggtagtggaa gtagttttcc agtttcggca tatatttgac cataaaacgc
     2401 cggtcttggt ggatggaatt gccgcacatc ggcgtggcgc gtccgggtac ccattccgac
     2461 ataaagtcca gcagtttctg ttcgacttcg gcttcggtat gcgacgattc gcgcacgcgc
     2521 tgcgtcagcc ccgtcctgcc gtgtgtggcg gtgttccact cgtccatatt gtcgagcagc
     2581 tcgtcgcttt ggtggacggc gtaaacttcg gattgcgcca atacattcaa atccgagtcg
     2641 gtaataatca tcgcgacttc gataatgcgg tcggtttcgg gattcagccc cgtcatttcc
     2701 atatcgagcc agcagaggtt gtttttgtcc tgcacggtgt ttccttttcg tttcagcgtt
     2761 ttacgccgct caagcgcgcc cagccttctt cggtttccgc cgggtcgagg tcgaaccatt
     2821 ggctgtaaat gccgccgagt tcttcggcct gttcgtccaa caaaccggac aacacgatgc
     2881 gtccgccctg tttggtgcgg gctgcgagca tttcgccgag catacgcaaa gggttggcga
     2941 ggatgttggc gacaactacg tcgaattgcc cttgaggcag accgtcgggc aggaagaatt
     3001 gtgcatcgac gttgttttgc gcggcgttgt ccctgccggc gcggacggcc tgttcgtcaa
     3061 tatccacgcc gacggcggaa cctgcaccga gtttgagggc ggcgatggtc aggatgcccg
     3121 aaccgcagcc gtagtcgagg acgctttcgc cgtttttgag ttgcgtatcc agccatttga
     3181 ggcagaggcg cgtggtcggg tggctgccgg tgccgaaggc gaggccggga tcgaggcgga
     3241 ggttgacggc agtgccttcg ggggcttcgt gccaagaggg ggtaatccac aggcgttcgg
     3301 aaatttggat ggggtcgaat tgcgcttggg tcaggcgtac ccagtcttgg tcttcaaggg
     3361 tttcgccggt gtatgccaag tcttttaatc cgcattcttg tgcggcggtt tggatgatgg
     3421 cggcggcttc gtcgtgttcg ccgaacaggg cgatgacttt gctctgctgc cagatttgtt
     3481 cggcgggcat accgggttcg ccgaaaatcg cctgttcgtt ttgcgtgccg gcgtaggcat
     3541 cttcgatggc ggcggagagt gcgccgtgtt ccatcagcgc gtcggcgagg cgttcggcga
     3601 cggcatcgtt gacgttgacg gtgatttgtt ggtagggcat aacgggcttt cttaacagac
     3661 cttcggaata gggtcgtact gtataagggg atgggtgtgt aacggaaatg ccgtctgaaa
     3721 acggacaaac tgtttcagac ggcatatcgg cggcggttta cttgtcctgt ttggctttgc
     3781 gatcttccag ccagtgttcc aaatagtgga tgctgacacc gcctttttgg aaacccgcat
     3841 cggcgaacag gtcgcggtga agcggcgtat tggttttgat gccggttacc gccagctcgg
     3901 cgagtgcgac gcgcattttc gccattgcct gttcacgcgt tttgccgtgt acgcagattt
     3961 tgccgatcag gctgtcgtag tacggtggga tgcggtagcc ttggtaaatg tggctgtcca
     4021 cgcggatacc gaagccgccg ggcaggtggc agctttcaat cgggcccggg ctggggatga
     4081 agttgtacgg gtcttcggcg ttgatacggc actcaaacgc gtggccttcg acttgaatat
     4141 ccttttgttt gtattgcaaa ggcaggccgg cggcgatgcg gagttgctcc tgcacaatgt
     4201 ccacgccggt aatcagctcg gtaaccggat gctcaacctg aacgcgcgta ttcatctcga
     4261 taaagaaaaa ttcgccgtct tcgtacagga attcaaacgt acctgcgccg cgatagccga
     4321 tgcgtttgca ggcgtcggca caggcgttgc cgattttggc acgttctttt tcagtgatga
     4381 acggagccgg tgcttcctcg atgacttttt ggtggcggcg ttgcagcgaa cagtcgcgct
     4441 cggcaaggta gatggcgttg ccgtgttcgt cggcaatcac ttggatttcg acgtggcgcg
     4501 gacgttgcaa atagcgttcc atgtaaacca tcgggttgcc gaatgccgcg cccgcttcgg
     4561 ccttggtcat ttcgacagat tggaggaggt cttctttttt ctcgaccacg cgcataccgc
     4621 gaccgccgcc gccgccagag gctttgataa tgacgggata accgacttta tcggcgattt
     4681 tgaggatttc ttcgccgtcg tcgggcaatg cgccgtcaga accggggacg cagggtacgc
     4741 ctgccgctat catcgcgtgt ttggcggaga ctttgtcgcc catcaggcgg atggtgtcgg
     4801 gtttcgggcc gataaaggta aagccggact gctcgacctg ttcggcgaaa tcggcgtttt
     4861 cggcaaggaa accgtagccc ggatggacag cgtccgcgca gcttacttcg gcggcggcga
     4921 taatggcggg gacgttgagg tagctttgcg cggaagcggc agggccgatg cacacggatt
     4981 cgtcggcgag tttgacgtgc aggctgtctt tgtcggcctc ggaatgcacg gcgacggtgg
     5041 caatgcccat ttcgcggcag gcacggagta cgcgtaatgc gatttcgcct cggttggcga
     5101 ttaaaacttt tttcagcatg atgactgttc ctgtggttcc ggcaacccgt ccgtaaaaaa
     5161 gggtgcggga acgctgaagg gggaaagcat ttcagacggc atcggaagtt tatgccgtct
     5221 gaaaacagga ttatccgatg atgaagagcg gttcgccgaa ttcgacgggc gtaccgtttt
     5281 cgaccagaat ttctttgacc gtgccggatt tttcggcttc gatttcgttc atcagcttca
     5341 tcgcttcgat gatgcacagc gtgtcgccgg ctttaacctg ttggccgact tcgacaaaag
     5401 gcgcggcatt cgggccgggt gcgcggtaga acgtgccgac cataggcgat ttttgcgcgt
     5461 cggacaaatc gcgggcggca ggtgcggcgg cgggcgcgga tgccgcaacg ggtgcggcgg
     5521 caggcgttac ggccggcgcg gcggcaggta cgggcgcggc gtaaacgggt gcggcggcga
     5581 tggttcgggt gatgcggact ttttcctcgc cttcggttac ttcgatttcg gcgatacccg
     5641 attcttcaac caaatcaatc agttttttta atttgcgcaa atccatttct gttcctttaa
     5701 aggctgccgg tgttccggcg ggttgttgcg ttggtttttc agaaaacagc cggcttgcgg
     5761 caacggcgca aaccgggcgg aatggtgttc ggatacggtt ttcctgtggt ggaaaacaac
     5821 cgtgagaatg tgtttatttt cccgaagttg tcggtaaatg tccagtaaaa tatcaaaaaa
     5881 cggcggtttt tgggggaaat gtgcaggaag cttgattttg cgcacaagat gccccgggtc
     5941 aagagtgttt attctaatct gttggttttt cggacaaaga tgccgtctga aaaagggcta
     6001 aagtgcgtat aatggcggct tgcccgaacg agagtgtaaa aatggatatt tcagattttg
     6061 attttaccct gcccgaaaag ctgattgccc agcatccgcc cgaagtgcgc ggcagcagcc
     6121 gccttttggt tgcgttgccc gatatgccgc tgcaagaccg ggtgttcggc gatttgcagg
     6181 attatgttga ggcgggcgac gttttggtgt tcaacaacac caaagtcatg aaggcgcggc
     6241 tgtttgggca gaaagacagc ggcggcagga tcgaagccct gattgagcgc gtgttggaca
     6301 accataccgc actggcgcac atccgttcgt ccaagtcccc caagcccggt atggggctgg
     6361 tgtttgaagg cggcatccgt gccgtgatgg tcgggcgtga gggcgaactg ttctgcctgc
     6421 gttttgaagg cggtcaaacc gtttacgaac ttttggaaca gaacggacac ctgcccctgc
     6481 cgccttatat cgaacgcgcc gccgacgcgg acgacgacag ccgttatcaa accgtttatg
     6541 ccaaatatca gggtgcggtc gccgcgccga cggcgggtct gcattttacg gaagaacttt
     6601 tgcgccgcct gaaagacaaa ggcgcagtaa ccgcagaagt aaccctgcac gtcggtgcgg
     6661 gaacgttcca gcccgtgcgt gtggaaaaaa tcgaagaaca caaaatgcac agcgaatggt
     6721 ttgaagtgcc gtctgaaacc gccgccgccg ttgaggcggc aaaagcacgg gggaacaaag
     6781 tctgggcggt cggcacgact tccatgcgcg ccctcgaatc tgccgcgcgt gcgacgagtc
     6841 gtctgaaagc ggggcagggc gacaccgata ttttcatcac gccgggctac cgttttaatg
     6901 ttgtcgacag gctggttacc aattttcatt tgccgaaatc gacgctgctg atgcttgtca
     6961 gcgcgttttc gggtatgggt catatccgcg ccgcgtatcg ttatgcggtc gaacgcgaat
     7021 accgtttctt cagctacggc gatgcgatgg ttttggggcg gaacgaaggg gtggtacgtt
     7081 agaacagccc caagtctatt gggggaagac aagtgccgtc tgaacggacg ttcggacggc
     7141 attcttttgt tgatttgaat gaaaggaact gtatgacata tagtggatta aatttaaatc
     7201 aggacaaggc aacgaagccg tagacagtac aaatagtacg gcaaggcgag gcaacgctgt
     7261 actggttttt gttaatccac tatagattca ggcgcgagag gcgagaaact cagtcattgt
     7321 tgatgacgcg caatacgtta aaattcattc cgttttggtc gtataaacat attacatacg
     7381 ccattttttt gtattcaagg ctgcctgaaa acagtgggca agaatatcta acccaacgaa
     7441 aagctgaaaa agcaacaaaa aataatctgc accttagtcg gttggttagt ccaaccttag
     7501 gggtgcagac cattcaatct ttcaggctgc ctttgtttgt ttataagata aatttttagc
     7561 cgaacacttt ttccaagtgt gcctgataat ctgccaagta tttttccact tgtggatttt
     7621 taaccacatc gttacataag aatgtcggca ggcgggtcat acccaaaaac tcgttggctt
     7681 tgtggaagtg catatacaaa acatcaacgc ctttgccttc aaagaaatcg ccttcgcggg
     7741 taaacgcctc aatcggcgca ttccaagtca gtgaaagcat atgttttttg ccttgcaaca
     7801 agccgcctgt gccgtagccc tcagtcggat tgacgcggtg tctgccgtcg ctttggtaga
     7861 gtttgccgtg tccagcggtt aatacttcgt ctatgtattt tttcactgtc caaggctcgt
     7921 gcatccacca gcccggcatc tgccaaatca cagcatccat ccaaacgaat ttttcgattt
     7981 ctgcctcaac atcatagccg gcatcaatca cggtttcttg aacattgtgt ccgagcgcgg
     8041 tcaaaacttc tttcgctttt ttgtgaagcg tgcggtttaa cccgccgtga gaatgtccga
     8101 acgccttgcc gccgtctaat aataaaatat tcatttgtta cctcgtttgt gaattgatga
     8161 atgtattgtg ccgttttact ttataattta aaagtgcaaa aataagaaaa cacttttgcg
     8221 tcaaatgaaa taatcagatg ttccaacaca cgggatgaca cataaagcgt ctccctatgt
     8281 gccgtcctga ttcggaaggg gttacacccc tcccaaataa agtctgatcc tgccgcccta
     8341 aagggcgggg ttccaaccga aaaggaaaca cgatgaaaac caattcagaa gaactgaccg
     8401 tatttgttca agtggtggaa agcggcagct tcagccgtgc ggcggagcag ttggcgatgg
     8461 caaattctgc cgtaagccgc atcgtcaaac ggctggagga aaagttgggt gtgaacctgc
     8521 tcaaccgcac cacgcggcaa ctcagtctga cggaagaagg cgcgcaatat ttccgccgcg
     8581 cgcagagaat cctgcaagaa atggcagcgg cggaaaccga aatgctggca gtgcacgaaa
     8641 taccgcaagg cgtgttgcgc gtggattccg cgatgccgat ggtgctgcat ctgctggcgc
     8701 cgctggcaac aaaattcaac gaacgctatc cgcatatccg actttcgctc gtttcttccg
     8761 aaggctatat caatctgatt gaacgcaaag tcgatattgc cttacgggcc ggagaattgg
     8821 acgattccgg gctgcgtgca cgccatctgt ttgacagccg cttccgcgta atcgccagtc
     8881 ctgaatacct ggcaaaacac ggcacgccgc aatctacaga agagcttgcc ggccaccaat
     8941 gtttaggctt caccgaaccc agttctctaa atacatgggc ggttttagat gcgcagggaa
     9001 atccctataa gatttcaccg cactttaccg ccagcagcgg tgaaatctta cgctcgttgt
     9061 gcctttcagg ttgcggtatt gcttgcttat cagatttttt ggttgacaac gacatcgctg
     9121 aaggaaagtt aattcccctg ctcgccgaac aaacctccga taaaacacac ccctttaatg
     9181 ctgtttatta cagcgataaa gccgtcaatc tccgcttacg cgtatttttg gattttttag
     9241 tggaggaact gggaaacaat ctctgtggat aattctataa aaacctgtca taaaattgtt
     9301 tttactcact taataacttt gagaaaaaat aaataagatg atgtatagcc gcggcaatgg
     9361 cagtctatat ggggagcgtg atagggctgt tccttatgta cggcttgtgt gtggcaacat
     9421 cggctttcca aatgacaaaa tgccgtctga aaccgcaaaa cggtttcaga cggcattttc
     9481 aacctgattc aggtatcagt tgcggttttt caaacgcccg tgcaactctt gaacgctgta
     9541 cacgcccaga tggtcgcggc ttttcgcgcc ttcgctcatc gcttcgccgc cggcagtggt
     9601 ggtgtattgc ggcacacgtt gctgcaatgc gctttggcgg atgatgtggc tgtcggacac
     9661 ggattgcgga tcgctggaaa cggtattcac gaccagtgcg atttcgccgt ttttcagcgc
     9721 gtcgccgatg tgcgggcggc cttcggggac tttgttgatg gtctgcacaa ttagcccgtg
     9781 ttcggtcagg tattgcgccg tgccgcgcgt ggcgcagatg ccgtagccta aggcttggaa
     9841 gtttttggcg gttttaatga cgcgttcttt gtcttcttcg cgcacggaga ggaagatttt
     9901 gccggtcggg ttgaggcgtt cgcccgcgcc gagttgggct ttgtagtagg cttcgccgaa
     9961 gcttgcgccc acgcccatga cttcgccggt ggagcgcatt tccggaccca aaatcgtatc
    10021 cacgcccggg aatttgatga aggggaacac ggcttcttta acggcataga aatcggggac
    10081 aacttctttt tccacgcctt gttctttcag ggagatgcct gccatgcagc gcgcgccgac
    10141 tttggcgagc ggcacgccgg tggctttgga gacgaagggc acggtgcggc tggcgcgcgg
    10201 gttcacttcc aatacgaaca ctacgccgtc ctgcacggca aactgcacgt tcatcagtcc
    10261 gaccacgccc agcgcgtacg ccatcgcttt ggtttggcgg cggatttcgt cttggatttc
    10321 ttcgcttaag gagtagggcg gcagcgagca gccggagtcg ccggagtgga tgcccgcctg
    10381 ttcgacgtgc tgcatgatgc cgccgataac cacatctttg ccgtctgaaa cgcagtccac
    10441 atcgacttca atcgcgttgt tcaggaagaa gtcgagcaac acggggctgt cttcggaaac
    10501 ctgcacggct tcgcgcatat atttttgcaa ctgctcggcg gagtggacaa tctgcatcgc
    10561 gcgtccgccc aaaacataag acgggcgcac gaccagcgga taaccgattt cttcggcttt
    10621 gacgagtgct tcttcttcgt tgtgggcgat gcggttgggc ggctggcgca ggcctaagtc
    10681 gttcaacact ttttggaagc gttcgcggtc ttcggcggcg tcgatgctgt cggcggacgt
    10741 gccgatgatg tttacgccgt tttcaaccaa cgcgttggcg agtttcagcg gggtttgacc
    10801 gccgtaatgc acaatcacgc cccacgggtt ttcggtgcgg acgatttcca acacgtcttc
    10861 caatgtcagc ggctcgaaat agaggcggtc gctggtgtcg aagtcggtgg acacggtttc
    10921 ggggttgcag ttgaccatga tggtttcaaa gcccgattcg cgcagggcga gtgcggcgtg
    10981 aacgcagcag tagtcaaact cgatgccctg accgatgcgg ttcgggccgc cgccgagaat
    11041 catcactttt ttacggtcgg aaggacggga ttcgcattcc tcttcgtaag tggagtagag
    11101 gtaggcggtt tcggtggcaa actcggcggc acaggtgtcg acgcgtttat agacgggatg
    11161 cagcttcagc gcgtagcggt gttcgcgcac ttctttttct tttacgccca aaagctgcgc
    11221 gatgcgtttg tcggagaagc ctttgcgttt cagacgacgt aaggcggcga aatccaaatc
    11281 ttgcaggcag cctgcactta cctgctgctc ttctttcacc aagtcttcga tttgcgccaa
    11341 gaaccaaggg tcgatggcgc agatttcgtg gatttcttcc agcgtgaagc ccgcgcggaa
    11401 cgcgtctgcc acaaacagca tacgttcggg gccggggttc gccagttcgc ggcggatttc
    11461 cgctttgtcg gagcttctcg gattgaagcc gcacaagcct gtttccaagc cgcgcagggc
    11521 tttttggaag ctttcctgaa tggtgcgtcc catcgccatc acttcgccca ccgatttcat
    11581 ctgcgtggtc aggcggtcgt ctgcggcggg gaatttttca aacgcgaaac gcgggatttt
    11641 ggtgacgaca tagtcgatag aaggctcgaa cgacgcgggg gttttgccgc cggtgatgtc
    11701 gttgcgcaac tcgtccaacg taaagccgac cgccagcttc gccgccacct tcgcaatcgg
    11761 gaagcccgtc gctttggaag ccagcgcgga cgaacggctc acgcgcgggt tcatctcaat
    11821 cacaatcatc tcgccgtttt cagggttcac cgcaaactgc acgttcgagc cgcccgtgtc
    11881 cacgccgatt tcgcgcaaca ctgccaacga agcattacgc atgatttggt attctttgtc
    11941 cgtcagcgtt tgcgccggcg caacggtgat ggagtcgccc gtatgcacgc ccatcgggtc
    12001 gaagttttca atcgagcaga tgatgatgca gttgtcgttt ttatcgcgca cgacttccat
    12061 ctcgtactct ttccagccga gaacggactg ctcaatcagc agctcgtgcg tgggcgaggc
    12121 atcgaaaccg cgttcgcaaa tcgccaaaaa ctcgtcttta ttgtaggcaa tgccgccgcc
    12181 cgaaccgccc atcgtgaaag aaggacgaat cagggtaggg aagccgacct gttcttgcgc
    12241 cgccaaagct tcgttcatgg tgtggcagac aaaagatttc gggcaagaca aaccgatttt
    12301 ttccatcgcc tctttaaagc ggccgcggtc ttccgccttg tcaatcgcgt cttccgtcgc
    12361 gccaatcagc tcgacattgt atttcgccaa cacgccgttg cgcgccaaat ccagcgcaca
    12421 gttcagcgcg gtctgaccgc ccatcgtggg cagaatcgca tcaggccgct ctttggcgat
    12481 aatcttctcc accgtctgcc acataatcgg ctcgatgtag gtaacatccg ccatttcagg
    12541 gtcggtcatg atggtggcgg ggttggaatt caccagaatg actttatagc cttcttcacg
    12601 caaagccttg caggcctgtg cgcccgaata gtcaaattcg caggcctgac cgataacgat
    12661 agggccggcg ccgatgataa ggatggattt taggtcggta cgtttgggca tggtgggtct
    12721 ttctatgaaa tcaaatgttt agctaaaaat ttattgctga ttttgattgg cttttaattg
    12781 ctctacgaca gtattggcaa tctcttttcc tgatggggct gtaattgtgt aataaaagct
    12841 aatactgcct atgaagaaac tgataatggc tatgatatag gctatataac tttgtgtttt
    12901 catttttttg tgatcatgtt tgatctgatt taattctttt aattcagaaa taattggagt
    12961 taataaatgt ttttgacttt cagatccatg cgtttccaaa agttcattta ttcctattag
    13021 tgttggtttt agttcgtctg agcagccatc aaaaggttct tcttgttgga tttccttttg
    13081 taactgtcta actaaattta aatttaattc atcagtgtaa tatagttgct taataatttt
    13141 tctggcagca aaattattaa ggtttactgc ttctgtcatt tgttttatat cattaagatc
    13201 taggttattg tgattatttt ttaatatatc aattattcta gatttaaatt tctttttctt
    13261 tatattctct aaatatagct gaattggaat aaaaacaatt ataaagagca aaagaaatat
    13321 atatgttagt gccatagccc atgtggcaat tatatttatc atttatcaat atcttccatt
    13381 tggtttatat attgtctcat aataagcaag ccgtagctcg catgcagggt gtgtgcggta
    13441 cgcacgcgtt ctccattttc cctgcaaccc caacccaccg tgtgcgtgcc ttgcggcaca
    13501 caccctaccg atgggttcaa aggtcgtctg aaaaaacgct cgcggcattt gttccatctt
    13561 ccttgcgata aaggctacct gaaaaattcc tgctgttgat atctcgggca ttctttctca
    13621 aaccgcctgc aactgccaaa tctgctgcaa cctgccccct cccccgtggg ggagggttgg
    13681 ggagagggca ttccccgaat ttcggcaacc tttcccaaca actcaaccac cgaaatacaa
    13741 gccttgtggc ttgttgccct ctctctagct ctctcccacg ggagagagga cggagtggct
    13801 gtagggctaa gggttctgca aggaaacagg ttgtgcaggt tgctttttgc ttttcagacg
    13861 acctgaaatc aacggtaaat ccaagtcgct tttcaaaccg cctgcaaccg caaaatctgc
    13921 tgaaacctac tccctccccc gtgggggagg gctggggaga gggcattctc cgaatttcgg
    13981 caacctttcc taacactcta accgccaaga cacaagcctt gtggcttgtt gccctctctc
    14041 taactctctc ccacgggaga gaggactggg cggttgttgg ggctaaggtt tctgtaaact
    14101 aatcaggtta tgcaggctgt tttttgtttt tcagacggcc tttataaatg ctcaattcag
    14161 tcggctttat cctattattt tcaataatcc aatcaaaatc agccatctgc tatcgtgcag
    14221 cttgcttttc caattcttgc aacacgagca ggatttccgc cagtacatcg tttgtctgct
    14281 gcaaaatttc gtgattccaa aaacgcagca cggtaaagcc caggctgttg agatatgccg
    14341 tccgcgcgtg gtcgtatacg gcttgttccg cgtgctgccc gccgtctgct tcgacaatca
    14401 gcttgggcgt tacgcacata aaatcaacaa tataattccc catcggctgc tggcggcgga
    14461 atttatagcc gttcagacga cctgcccgca ggtgctgcca caattttgct tccgccccgc
    14521 tcatttcttg gcgcatggct ttggcgcgtt ggcgcaagat ggggttgtcg gtggtcaaga
    14581 gtttctcgtg cgggttcatt ttgttgtcgt gctgtttgct gccctctctc taactctctc
    14641 ccacggggag agaggacggg gcggttgttg gggttaaagg ggctgtaagg aaaacaagtc
    14701 gttcaggcca ctttttactt ttcagacgac ctgcaatcaa cggttgtaaa tccaagttgc
    14761 ttttcaaacc gcctgtaacc gcaaaacttg ctgcaaccta ccccctcccc cgtgggggag
    14821 ggctggggag agggcattct tcgaatttcg gcaaccttcc ccaacaccct aaccgcccaa
    14881 acacaagcct tgctgtttgt tgccctctct ctaacgcttt cccacaggga gacaggacgg
    14941 ggcggctgta gtgattaagg gttttgcaag gaaaacaagg aaaacaagtt gtacaggctg
    15001 ttttttattt ttcaagcgac ctgaaatcaa cgcttgtaaa tccaagtcgc ttttcaaact
    15061 gcctgcaacc gcaaaatctg ctgcaaccta ccccctcccc cgtgggggag ggctggggag
    15121 agggcatttt ccaagttgcg gcaatctttc ccaaatccct tagtcttcta aaatacaagc
    15181 cttacggttg ttgccaaatg aaacttcttc catacccaaa acttgcgtgt aaaacgcaat
    15241 ggttcggtca atgtcggcaa cggtcagtac cagatggtcg agtgcgctaa tcttcatttc
    15301 ccgctttctt tttcaggcgg cggcagtgcc gtctgaaagc cattatgccc gttttgccgc
    15361 tttcatattg ccaatgaatt tgtcaaacaa atagccgaca tcttgcgggc cggggctggc
    15421 ttcggggtgg ccttggaagc agaacacagg tttgtcggtc agctcgatgc cttgcaaagt
    15481 gttgtcaaac aaggatttgt gggtaatgcg tgcgttagcg ggcagggtgt cggcatcaac
    15541 ggcaaaaccg tggttttggc tggtgatgac gactttgccg ctgtccaaat cttgcacagg
    15601 gtggttcgca ccgtggtggc tgaagcgcat tttcagggtt ttcgcgccga tagcgaggct
    15661 gatgagctgg tgtcccaagc agatgccgaa aatcggtttg ccgctttcca tcagtttttg
    15721 cacggcttcg atggcgtagg tgcaaggctc ggggtcgccg gggccgttgg acaggaacac
    15781 gccgtcggga ttgagtgcca acacgtcttg tgcgctcgtt tgggcgggga cgacggtcag
    15841 gcggcagccg cgcgaggcga gcatacgcag gatgttggtt ttcacgccga aatcgtaggc
    15901 gacgacgtgg taaggctgtt cgtcaggggt aacgaaaccc ttgcccaatt cccattcgcc
    15961 ttccgtccat tcgtaagttt ccgtgcagga aacttctttt gccaagtctt tgccgaccat
    16021 actgccgaac gcggcgatga gttcttgcgc tttttcgatt gtggcatccg caccggtcag
    16081 aatcgcgccg ccttgcgcgc ctttttcgcg caacagcgtg gtcaggcggc gggtatcgat
    16141 gtcggcgatg gcgacggttt ggttgcgtac caaatagtcg tgcaggcttt cggaggcgcg
    16201 gaagttgctg tgcaagagcg gcaggtcgcg gataatcaaa ccggcggcgt aaacgctgcg
    16261 gctttcttca tcttcggcgt tggtaccggt attgccgatg tgtgggtagg tgagggtaac
    16321 gatttgtttg cagtaggacg ggtcggtcag gatttcctga tagccagtca tcgaagtatt
    16381 gaacacgact tcgccggaag tcgaaccttc gtaaccgatt gatgtgccgt ggaatacgct
    16441 gccgtcagcg aggacgagga gggcgggggt gctcatgatg ggaatcctgt ttttaataaa
    16501 attcttgaca atgccgtctg aagggacttc ggcagggggc atccggtcgg aaaaatccgg
    16561 tcaaaaaaaa acacgccgcg caagatagac gcgtaacgtg cttttcgggc aagtgcctat
    16621 accctgaaag cagcgtattt taagacgaaa catacccgat ttcaagcgca aacgcggcag
    16681 gcgggctgat atgttcgcgc gaaaacggaa atccgtggcg taaaaccgcc cgctccgcgc
    16741 ccactatgcc cgttacgcat ttccccacgt ccgcccggcg aaactatggg aatacccgaa
    16801 tcgtcaggaa tacctgaatc gtcaggaata cctgaatcgt caggaatacc cgaaccatca
    16861 ttcccgcgca ggcgggaatc cagacctgtc ggcacagaaa cttatcgggt ataacggttt
    16921 cttgagattc cgcat
//
LOCUS       DAWGBY010000034        16720 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.034, whole genome shotgun sequence.
ACCESSION   DAWGBY010000034 DAWGBY010000000
VERSION     DAWGBY010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16720
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.034"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            6..81
                     /locus_tag="WHG62_000956"
     tRNA            6..81
                     /locus_tag="WHG62_000956"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="WHG62_000957"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="WHG62_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ1725086.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="WHG62_000958"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="WHG62_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ1725087.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="WHG62_000959"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="WHG62_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ1725088.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="WHG62_000960"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="WHG62_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ1725089.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2472..2972
                     /gene="rplJ"
                     /locus_tag="WHG62_000961"
     CDS             2472..2972
                     /gene="rplJ"
                     /locus_tag="WHG62_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ1725090.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3030..3401
                     /gene="rplL"
                     /locus_tag="WHG62_000962"
     CDS             3030..3401
                     /gene="rplL"
                     /locus_tag="WHG62_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ1725091.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3591..7769
                     /gene="rpoB"
                     /locus_tag="WHG62_000963"
     CDS             3591..7769
                     /gene="rpoB"
                     /locus_tag="WHG62_000963"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ1725092.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            7921..12096
                     /gene="rpoC"
                     /locus_tag="WHG62_000964"
     CDS             7921..12096
                     /gene="rpoC"
                     /locus_tag="WHG62_000964"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ1725093.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12387..12644
                     /locus_tag="WHG62_000965"
     CDS             12387..12644
                     /locus_tag="WHG62_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725094.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRIGMPINIG"
     gene            12641..12790
                     /locus_tag="WHG62_000966"
     CDS             12641..12790
                     /locus_tag="WHG62_000966"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ1725095.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            12969..13340
                     /gene="rpsL"
                     /locus_tag="WHG62_000967"
     CDS             12969..13340
                     /gene="rpsL"
                     /locus_tag="WHG62_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ1725096.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            13458..13928
                     /gene="rpsG"
                     /locus_tag="WHG62_000968"
     CDS             13458..13928
                     /gene="rpsG"
                     /locus_tag="WHG62_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ1725097.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            13947..16052
                     /gene="fusA"
                     /locus_tag="WHG62_000969"
     CDS             13947..16052
                     /gene="fusA"
                     /locus_tag="WHG62_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ1725098.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGKGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            16140..>16720
                     /locus_tag="WHG62_000970"
     CDS             16140..>16720
                     /locus_tag="WHG62_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ1725099.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAA
                     KAYDQIDNAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSS
                     YDFPGDDCPIVQGSALKALEGDAAYEEKIFELAT"
BASE COUNT         4453 a         3751 c         4324 g         4192 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgtcggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaacgttaa agtggatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggaagggtt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgctgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcgc attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcccgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ctagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 cccccgtgtt tccggtttta ttggagggag ggctaataga cctacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaaggg ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgaa aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagttcgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggt aaagccaatc catctcctcc ggttggtcct gctttgggtc
     1201 agcgcggttt gaatattatg gaattttgta aggcatttaa tgctgcaacc caaggtatgg
     1261 agcctggctt accgattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac cccgccagct tctatcttgt tgaaaaaggc tgccggtttg caaaaaggta
     1381 gttctaatcc tctgaccaac aaagtgggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agatcctgat ttgactgctg ctgacttgga tgcggctgtc cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggatg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagctcttc gctcttctgt ggaagccaat aaattatatg caattgatga
     1621 agcaattgct ttggtaaaaa aagcagcgac tgctaaattt gacgagtctg ttgacgtatc
     1681 tttcaacttg ggcgttgatc cgcgtaaatc tgaccaagtt atccgtggat cggtcgttct
     1741 gcctaaaggc accggtaaga taacccgtgt ggctgtattt actcaaggtg caaatgcaga
     1801 agctgctaaa gaagctggtg cagatatcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg acgttgttat tgcttctccc gatgcaatgc gtattgttgg
     1921 tcaattgggt accatcttgg gtcctcgtgg tctgatgcca aaccctaaag taggtacggt
     1981 tacccctaat gttgccgaag cagtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggatgc tatcgttaaa gccaagcctg ctgccgctaa
     2161 aggtcagtat ctgaaaaaag ttgctgtgtc tagcaccatg ggtttgggta ttcgcgttga
     2221 tacatcaagc gtaaataact aatcttaagg aattttcaag cagtttggtt ttctgggctg
     2281 cttgaatttg ggctacttaa aattaagtag atgtccaaga ccgtagggat cgtaagattt
     2341 aatcgtaact gccctacgca gacggtagtc ctgaaacaca ttgcaagatt gcttgtaaga
     2401 tgtcttttta ggttaccgcg ctggtgggat atcgttttgg tatcctgttt ataaacagtg
     2461 ggaggtagac cttgagtctc aatattgaaa ccaagaaagt ggcggtcgag gaaattagcg
     2521 cggcaattgc taatgctcaa accctcgtag tcgctgaata tcgcggtatc agtgtttcca
     2581 gtatgactga gcttcgtgcg aatgcacgta aagaaggcgt ttatttgcgc gttctgaaaa
     2641 atactttggc tcgtcgtgca gtgcaaggta cttcatttgc agaattggcc gatcaaatgg
     2701 ttggtccgtt ggtttacgct gcttctgaag atgctgttgc tgctgctaaa gtgttgcacc
     2761 aattcgcgaa aaaagatgac aaaattgtcg ttaaagccgg ttcttacaat ggcgaagtaa
     2821 tgaatgctgc tcaggttgct gagttggctt ctattccgag ccgcgaagag ctgttgtcca
     2881 aactgttgtt cgttatgcaa gctcctgtat cgggctttgc gcgcggtttg gctgctttgg
     2941 cagagaaaaa agccggcgaa gaagccgctt aatcgatttt gtttctgtta atcaattatt
     3001 ttttaataca atatttggag taaaatagca tggctattac taaagaagac attttggaag
     3061 cagttggttc tttgaccgta atggaattga acgacttggt taaagctttt gaagaaaaat
     3121 tcggtgtttc tgctgctgct gttgcagttg caggtcctgc tggtgccggt gctgccgatg
     3181 ctgaagaaaa aaccgaattt gatgtcgttt tggcttctgc cggcgatcaa aaagtcggcg
     3241 tgattaaagt tgtccgtgca attaccggtt tgggtctgaa agaagctaaa gacatcgttg
     3301 acggcgcacc taaaaccatt aaagagggtg tttctaaagc tgaagccgaa gacatccaaa
     3361 aacaactgga agaagcaggc gctaaagtcg aaatcaaata atttgatgct tcttatgaag
     3421 gctggcagtt ttctgccagc cttattttgc ttcttaaaat aaacatcaag tattgtttac
     3481 atttatttgc atagttttta tcaagtcatt gcaaataaat gtaaatatca gattgatgcg
     3541 taccgttgtt tcagacggcc tattattgaa aattactttt cggagtgtgt atgaactatt
     3601 cgtttaccga gaaaaaacgt atccgtaaga gttttgcaaa gcgggaaaat gttttggaag
     3661 ttcctttctt gctagcaacc caaattgatt cttatgcgaa gtttttgcag ctggaaaatg
     3721 cttttgacaa acgtaccgat gacggtctgc aggcagcatt taattctatt ttcccgattg
     3781 tgagccataa cggttatgcg cgattggagt ttgtgcatta cacattgggc gagcctttgt
     3841 tcgatattcc cgaatgtcag ttgcgcggaa tcacttatgc agcccccttg cgcgcgcgta
     3901 tccgtttggt gattttggat aaggaagcat ctaaaccgac ggtaaaagaa gttcgtgaaa
     3961 acgaagtgta tatgggcgaa attccgttga tgaccccgag cggttctttt gtgattaacg
     4021 gcacagagcg tgtgattgtc tcccagttgc accgttcgcc cggcgtattc ttcgagcatg
     4081 acaaaggtaa gacgcactct tccggcaagt tgttattctc cgcccgtatc attccctacc
     4141 gcggttcatg gttggatttt gaatttgacc cgaaagattt gctgtatttc cgtatcgacc
     4201 gccgccgtaa aatgccggta acgattttgt tgaaggcttt gggctacaac aatgagcaaa
     4261 tcttggatat tttctacgac aaagaaacgt tctatttgtc ttcaaacggt gttcaaaccg
     4321 atttggtcgc aggccgtctg aaaggcgaaa ctgccaaggt cgatatcttg gataaagaag
     4381 gcaatgtatt ggttgccaaa ggtaagcgca ttactgcgaa aaatatccgt gatattacca
     4441 atgcaggcct gacccgtttg gatgtagaac cagaaagcct gctgggcaaa gcattggctg
     4501 ccgacctgat tgattcggaa accggcgagg tattggcttc tgccaatgat gaaattacag
     4561 aagagttgtt ggccaaattt gatatcaacg gcgtaaaaga aattacgacc ctttacatca
     4621 atgagttgga tcagggtgct tatatctcca ataccttgcg tacggatgag actgccggcc
     4681 ggcaggcggc gcgtgttgcg atttaccgta tgatgcgtcc gggcgaaccg cccactgaag
     4741 aggcggtcga gcaattgttt aaccgcttgt tcttcagtga agacagctac gatttgtccc
     4801 gcgtaggccg tatgaaattt aatacgcgca catacgaaca aaaactgtcc gaagcccaac
     4861 aaaactcttg gtacggccgc ctgctgaacg aaacgtttgc cggtgctgcc gacaaaggcg
     4921 gttatgtcct gagcgtcgaa gatattgtcg cctcgattgc gactttggtc gagttgcgta
     4981 acggccatgg cgaagtggat gatatcgatc acttgggcaa ccgccgagta cgttcggtag
     5041 gcgagctgac tgaaaaccaa ttccgtagcg gtttggcccg tgtggaacgt gccgtaaaag
     5101 aacgtttgaa tcaggcggaa tcagaaaact tgatgccgca cgatttgatt aatgcaaaac
     5161 ctgtttctgc tgctattaaa gaattcttcg gctccagcca attgagtcag tttatggatc
     5221 agaccaatcc cttgtctgaa gtaacccata aacgccgcgt atccgcattg ggtccgggcg
     5281 gtttgacccg cgaacgtgca ggatttgagg tgcgggacgt gcatccgacc cactacggtc
     5341 gcgtatgtcc gattgaaacg cctgaaggtc cgaacatcgg tttgatcaac tcattgtccg
     5401 tttatgcgcg caccaatgat tacggtttct tggaaacgcc ttaccgccgc gttatcgacg
     5461 gcaaagtaac cgaggaaatc gattacttgt ctgccatcga agaaggccgc tatgtgattg
     5521 cacaggcgaa tgccgatttg gattcagatg gcaatctgat tggcgatttg gttacctgtc
     5581 gtgaaaaagg cgaaaccatt atggcaacgc ccgaccgcgt ccaatatatg gacgtggcaa
     5641 ctggtcaagt ggtatccgtt gcagcatccc tgattccgtt cttggaacat gatgacgcga
     5701 accgcgcatt gatgggtgcc aacatgcaac gtcaggcagt gccttgcttg cgtcctgaaa
     5761 aaccgatggt cggtaccggt atcgagcgtt ccgttgccgt tgactctgct actgcaatcg
     5821 ttgcccgccg aggcggcgtg gtcgagtatg tcgatgccaa ccgtgttgtg attcgtgtcc
     5881 atgacgacga agcgactgcc ggcgaagtgg gtgtcgatat ttacaacttg gttaaattta
     5941 cccgttccaa ccagtctacc aatatcaatc agcgtccggc tgtcaaagca ggcgatgttt
     6001 tgcaacgcgg cgatttggtg gccgatggcg cgtccaccga tttgggcgaa ttggctttgg
     6061 gtcaaaatat gaccatcgcc ttcatgccgt ggaacggtta caactacgaa gactcgattc
     6121 tgatttccga aaaagtggct gcggacgacc gctatacttc gattcacatt gaggaattga
     6181 atgtcgttgc ccgcgatacc aagctgggtg cggaagacat tacccgcgat attccgaact
     6241 tgtccgagcg tatgcaaaac cgtttggacg aatccggtat cgtttacatc ggtgcggaag
     6301 tagaagccgg cgatgtgttg gtaggcaagg taacgcctaa aggcgaaacc cagctgacgc
     6361 cggaagaaaa actgctgcgc gccatcttcg gtgaaaaagc atctgacgta aaagatactt
     6421 cattgcgtat gcctaccggc atgagcggta ccgttatcga cgttcaagtc ttcactcgtg
     6481 aaggtattca acgcgacaaa cgtgctcaat ccattatcga ttccgagttg aaacgctacc
     6541 gtttggattt gaacgaccaa ttgcgtattt tcgacaacga cgcattcgac cgtatcgagc
     6601 gtatgattgt cggtcagaaa gccaacggcg gcccgatgaa gctggccaaa ggcagtgaaa
     6661 tcacgaccga atatctggcg ggtctgccga gcaggcacga ttggttcgat atccgtctga
     6721 ccgatgaaga tttggccaag cagttggaac tgattaaagt gagcctgcaa caaaaacgcg
     6781 aagaagcgga cgagttatac gaaatcaaga agaaaaaact gacccaaggc gacgaattgc
     6841 aacccggcgt acaaaaaatg gtgaaagttt ttatcgccat caaacgccgt ctgcaagccg
     6901 gcgacaaaat ggcgggccgc cacggtaaca aaggcgtggt atcgcgcatt ctgccagtgg
     6961 aagacatgcc ttacatggcg gacggccgtc cggtagacat cgtactgaac ccattgggcg
     7021 taccttcccg tatgaacatc ggtcagattt tggaagttca cttgggttgg gcagcaaaag
     7081 gtatcggcga gcgtatcgac cgtatgctga aagagcaacg caaagcaggc gagttgcgcg
     7141 agttcttgaa cagactctac aacggcagcg gtaagaaaga agatttggat gccctgactg
     7201 atgaagaaat catcgaactg gcctccaacc tgcgcaaagg tgcatctttc gcctctcctg
     7261 tattcgacgg tgcgaaagag tctgaaatcc gcgaaatgct gaacttggct tatccgagcg
     7321 acgatcctga ggttgaaaaa ctgggcttca acgacagtaa aacccaaatc acgctgtatg
     7381 acggccgttc aggcgaagca tttgaccgca aggttacagt aggtgtgatg cactatctga
     7441 aactgcacca cttggttgac gaaaaaatgc acgcccgttc taccggtccg tacagtctgg
     7501 ttacccagca gcctttgggc ggtaaagccc agttcggcgg ccaacgtttc ggcgagatgg
     7561 aggtttgggc attggaagca tacggcgcgg catacacgct gcaagagatg ttgactgtga
     7621 agtctgacga cgtgaacggt cgtaccaaaa tgtacgaaaa catcgtcaaa ggcgaacaca
     7681 aaatcgatgc cggtatgccc gagtccttca acgtattggt caaagagatt cgctcactgg
     7741 gcttggatat cgatttggaa cgctactgat acgggtttca gacggcataa ggggagctgt
     7801 tctgcaggta tgcggggcag ccgacaatgt ttaaaaacga aatgccgtct gaaaacactg
     7861 tacctctatc catatcgaaa atccgccatg cggtaaaaat acttccttca aggagcaaaa
     7921 atgaatttgt tgaacttatt taatccgttg caaactgccg gcatggaaga agagtttgat
     7981 gccattaaaa tcggtattgc ctctcccgaa accatccgct catggtctta tggcgaagtt
     8041 aaaaaacctg aaaccatcaa ctaccgtacg ttcaaacctg agcgtgacgg tttgttctgt
     8101 gccaaaatct ttggcccggt caaagactac gaatgcttgt gcggaaaata caaacgcttg
     8161 aaatttaaag gcgtaacgtg tgaaaaatgc ggcgtggaag taaccctgtc caaagtgcgc
     8221 cgcgaacgca tgggccatat cgaattggct gcgcccgtcg cacatatttg gttcttaaaa
     8281 tccctgcctt cccgcttggg tatggtgtta gacatgactt tgcgcgatat cgaacgcgta
     8341 ttgtactttg aagcatttgt ggtaaccgat cccggtatga ctccgctgca acgccgccaa
     8401 ttgctgactg aagacgatta ctacaacaag ctggacgaat acggcgacga tttcgatgcc
     8461 aaaatgggtg cggaaggtat ccgcgaattg ctgcgtaccc tgaatgtagc gggcgaaatc
     8521 gaaatcctgc gccaagagtt ggaatcgacc ggttccgaca ccaaaatcaa aaaaatcgcc
     8581 aaacgcttga aagtattgga agctttccat cgttccggta tgaaactgga atggatgatt
     8641 atggatgtgc tgccggtatt gccgcctgat ttgcgtccgt tggttccatt ggatggtggt
     8701 cgttttgcca cttccgattt gaacgatttg taccgccgcg ttattaaccg taacaaccgt
     8761 ctgaaacgtc tgttggaact gcatgctcct gacatcatcg tccgcaacga aaaacgtatg
     8821 ttgcaagaag cagttgactc gctgttggat aacggccgtc gcggtaaagc catgaccggc
     8881 gccaacaaac gcccgctgaa atcattggca gacatgatta aaggtaaggg tggccgcttc
     8941 cgtcaaaacc tgctgggcaa acgtgtggac tactccggcc gttccgtgat taccgtaggc
     9001 ccgtacctgc gtctgcacca atgcggtttg ccgaaaaaaa tggctttgga actgttcaaa
     9061 ccgttcattt tccacaaatt ggaaaaacaa ggtttggcct ctaccgttaa agcagcgaaa
     9121 aaattggtag agcaagaagt accggaagta tgggacatct tggaagaagt catccgcgaa
     9181 catccgatta tgctgaaccg tgcgccgacc ctgcaccgtt tgggtattca agcgttcgaa
     9241 cctatcttga ttgaaggtaa agcgattcag ttgcacccat tggtgtgtgc tgcgttcaac
     9301 gccgactttg acggcgacca aatggcggta cacgttccat tgagcttgga agcacaaatg
     9361 gaagcacgca cgctgatgct ggcttcaaac aacgtattgt ctcctgccaa cggcgaaccg
     9421 attatcgtac cttcccaaga catcgtattg ggtctgtact acatgacccg cgaccgtatc
     9481 aatgccaaag gcgagggcag cctgtttgcc gatgtgaaag aagtgcatcg cgcataccat
     9541 accaaacagg ttgaactggg tacgaaaatt accgtacgtc tgcgcgaatg ggtgaaaaac
     9601 gaagcaggtg agtttgagcc tgtcgttaac cgttacgaaa caaccgtcgg ccgtgcattg
     9661 ttgagcgaaa tcctgccgaa aggcctgccg tttgaatatg tcaacaaagc gttgaagaaa
     9721 aaagaaattt ctaaactgat taacgcatcg ttccgcctgt gcggcttgcg cgatacggtt
     9781 atctttgctg accacctgat gtacaccggt ttcggatttg cggcaaaagg cggtatttcc
     9841 attgccgttg acgatatgga aattccaaaa gaaaaagcgg ccttgctggc tgaagccaat
     9901 gccgaggtta aagaaatcga agaccaatac cgtcaaggtt tggttaccaa cggcgaacgc
     9961 tacaacaagg tggtcgatat ttggggtcgt gccggcgata aaatcgctaa agcgatgatg
    10021 gacaacctgt ccaaacagaa agttatcgac cgtgccggca acgaagtcga tcaagagtca
    10081 ttcaactcca tctatatgat ggctgactcc ggtgcccgtg gttctgcggc tcagattaaa
    10141 cagttgtccg gtatgcgcgg tttgatggcg aaacctgacg gctcgattat tgaaacgccg
    10201 attacctcaa acttccgcga aggtctgacc gtattgcaat actttattgc gacccacggt
    10261 gcgcgtaagg gtttggcgga taccgcattg aaaaccgcga actccggtta cctgacccgt
    10321 cgtctggtag acgtaactca agatttggtc gttgttgaag acgattgcgg tacttcagac
    10381 ggctttgtca tgaaggcagt ggtacaaggc ggtgatgtga ttgaagcatt gcgcgatcgt
    10441 attttgggcc gtgttaccgc gtctgacgtt gtcgatccgt caagtggcga aacattggtt
    10501 gaagcaggca cgttgttgac tgaaaaactg gtggatatga ttgaccaatc cggtgtcgat
    10561 gaagtcaaag tccgtacgcc gattacttgt aaaacccgtc acggtttgtg cgcgcactgt
    10621 tacggccgcg acttggcgcg cggcaaactg gtcaatgccg gcgaggcagt cggcgtgatt
    10681 gccgctcagt ctatcggcga accgggtacc cagttgacca tgcgcacgtt ccacatcggt
    10741 ggtgcggcat cccgtgcggc agcagccagc caagtggaag ccaaatccaa cggtacggca
    10801 cgtttcagca gccagatgcg ttacgttgcc aacaacaaag gtgagttggt tgtcatcggt
    10861 cgctcttgcg aagtcgtgat tcatgatgac atcggccgtg aacgcgaacg ccacaaagta
    10921 ccttacggtg ccatcctgct ggtacaagac ggtatggcca ttaaagccgg tcaaaccttg
    10981 gcaacctggg atccgcatac ccgtccgatg atcaccgaac atgcaggtat ggtgaaattt
    11041 gagaacgtgg aagagggtgt taccgttgcg aaacaaactg acgatgtaac cggtttgtcc
    11101 actttggtgg tgattgacgg taaacgccgt tccagcagcg cgtccaaact gctgcgtccg
    11161 actgtaaaat tgttggatga aaacggcgtg gaaatctgta ttcccggtac gtccactccg
    11221 gtttcgatgg cattccccgt tggtgcggtg attaccgtac gcgaaggtca ggaaatcggt
    11281 aaaggcgacg tattggcgcg tatcccgcaa gcctcttcca aaacccgcga cattaccggt
    11341 ggtctgccgc gcgttgccga attgtttgaa gcacgcgtgc cgaaagatgc cggtatgttg
    11401 gcggaaatta ccggtaccgt ttccttcggc aaagagacca aaggcaagca acgtctgatt
    11461 gttactgacg tggacggtgt agcatacgag accttgattt ccaaagagaa acaaattctg
    11521 gtacacgacg gtcaagtggt aaaccgcggt gaaaccatcg tggacggagc tgttgatccg
    11581 catgatattc tgcgtttgca aggtatcgaa gcactggcac gctacattgt ccaagaggtg
    11641 caagaggttt accgtctgca aggtgtgaag atttctgata aacacatcga agtcatcatc
    11701 cgtcaaatgt tgcgccgtgt gaacattgcg gatgccggcg aaaccgggtt cattaccgga
    11761 gagcaggtcg aacgcggcga tgtgatggcg gccaatgaaa aagctttgga agaaggcaaa
    11821 gagccggcac gttacgaaaa cgtattgctg ggtattacca aagcctccct gtccaccgac
    11881 agtttcattt ctgccgcatc gttccaagaa acgacccgtg ttctgaccga agccgcgatt
    11941 atgggcaaac aagacgaact gcgcggttta aaagagaacg tcatcgtcgg ccgcctgatt
    12001 cctgccggta ccggtttgac ttatcaccgc agccgtcatc agcaatggca aggggtagag
    12061 caggagactg ctgaaaccca agtaacggat gaataatctt cggcgcgttt attcaataca
    12121 aaaccgcaag ctttaagctt gcggtttttc tttgtccgat taaggcaaaa acaagcgttt
    12181 tcgtcatttt gaggcgtgtg gattattcct taggtatttt cgggccggag accaacgagg
    12241 tggcgggtgt cgtcggtacg tccggagacc aaaataactt tgccaaggat gttggtttcg
    12301 gcggtcaaaa aagtagcgtc ttaatgtttt ccatttaaac aaatgtcgtc tgaaacttca
    12361 gacggcattt cctttaagaa ataaatatga aacccagaaa tctctttttt gcaggctgcc
    12421 tgctgacttc ggcgacgttt gccgaggata tcggcgtacc tgtcgaactg attaacgtcg
    12481 gtaatcggat tgcgatgccg tctgaagggg aaagcctcgc cctcctgccg tttgccgagg
    12541 atgtaccgcc ggttcgcgat gcaatgccgt ctgaagttcc taaaagcgcg gcaggcggcg
    12601 atgttcgggg tgaccggata ggaatgccga ttaacatcgg atgagcgcgg ctttatggca
    12661 taaaaaactg tcgtggaaag gatttacacc ccaaataaat ttccgttaca acaagatcaa
    12721 cagcaatatg cccgcctttt attcgcgcag cggcaaggaa cggtttgtca gtatagaaaa
    12781 aacgtattga cagtattttc ttcagtcgtc cgactgattg tgagggatgt cggtaaatat
    12841 ttatcggcaa acaagaaaat catctttctt cttgtcgtta tgcttgactg tatacttgca
    12901 ataaaaatat aattccactc ttgccgacat ggtgtcggca agtatttaac tcaacaggac
    12961 gagaaaatat gccaactatc aaccaattgg tacgcaaagg ccgtcaaaag cccgtgtacg
    13021 taaacaaagt gcccgcactg gaagcctgcc cgcaaaaacg cggcgtgtgc acccgtgtat
    13081 acacgactac ccctaaaaaa cctaactctg cattgcgtaa agtatgtaaa gtccgcctga
    13141 ccaacggttt tgaagtcatt tcatacatcg gcggcgaagg ccacaacctg caagagcaca
    13201 gtgtcgtatt gattcgcggc ggtcgtgtaa aagacttgcc aggtgtgcgt taccacactg
    13261 tacgcggttc tttggatact gcaggcgtta aagaccgtaa acaagcccgt tccaaatacg
    13321 gtgctaagcg tcctaaataa ttactgggac ttaaataggc acgtcggccg cctaagctga
    13381 acaacggccg agtaagtgaa tactcaattg ggtattcatg ggaatagacc cgactgaata
    13441 gattaaagga aattaaaatg ccaagacgta gagaagtccc caagcgcgac gtactgccag
    13501 atcctaaatt cggcagcgtc gagttgacca aattcatgaa cgtattgatg attgacggta
    13561 aaaaatccgt tgccgagcgt atcgtttacg gtgcgttgga acagattgag aaaaaaaccg
    13621 gcaaagtagc aatcgaagta tttaacgaag ctattgcaaa cgccaaacct atcgtggaag
    13681 tgaaaagccg ccgtgtaggt ggtgcaaact accaagttcc tgttgaagtt cgtccttcac
    13741 gccgtttggc tttggcaatg cgctgggttc gcgatgcggc ccgcaaacgt ggtgagaaat
    13801 ccatggacct gcgtttggca ggcgaattga ttgatgcgtc cgaaggccgt ggcggtgcgt
    13861 tgaaaaaacg tgaagaagta caccgtatgg ctgaagccaa caaagcattc tctcacttcc
    13921 gtttctaatt ttgaaaggct aataaaatgg ctcgtaagac cccgatcagc ctgtaccgta
    13981 acatcggtat ttccgcccat atcgatgcgg gtaaaaccac gacgacagaa cgtattttgt
    14041 tctataccgg tttgacccac aagctgggcg aagtgcatga cggtgcggct actaccgact
    14101 acatggaaca agagcaagag cgcggtatta ccattacctc cgctgccgtt acttcctact
    14161 ggtccggtat ggcgaaacaa ttccccgagc accgcttcaa catcatcgac accccgggac
    14221 acgttgactt taccgtagag gtagagcgtt ctatgcgtgt attggacggc gcggtaatgg
    14281 tttactgcgc ggtgggcggt gttcaacccc aatctgaaac cgtatggcgg caagccaaca
    14341 aataccaagt gccgcgcttg gcgtttgtca ataaaatgga ccgtcagggt gccaacttct
    14401 tccgcgttgt cgagcaaatg aaaacccgtt tgcgcgcaaa ccctgtacct atcgtcattc
    14461 cggttggtgc ggaagacaac ttcagcggtg tggttgattt gttgaaaatg aaatccatca
    14521 tttggaatga agccgataaa ggtacaacct ttacctatgg cgatattcct gccgaattgg
    14581 tcgaaactgc cgaagaatgg cgtcaaaata tgattgaagc cgcagccgaa gccagcgaag
    14641 aactgatgga caaatactta ggcggcgacg agctgaccga agaagaaatc gtaggcgcgt
    14701 tgcgtcaacg tactttggca ggcgaaattc agcctatgct gtgcggttct gcatttaaaa
    14761 acaaaggtgt tcaacgtatg ttggacgcag ttgtagaatt gctgccagct cctaccgata
    14821 ttcctccggt tcaaggtgtt aatcctaaca ctgaagaagc cgacagccgt caagccagcg
    14881 atgaagagaa attctctgca ttggcattca aaatgttgaa cgacaaatac gtcggtcagc
    14941 tgacctttat ccgcgtttac tcaggcgtag taaaatccgg cgataccgta ctgaattctg
    15001 taaaaggcac tcgcgaacgt atcggtcgtt tggtgcaaat gactgccgca gaccgtactg
    15061 aaatcgaaga agtacgcgct ggcgacatcg cagccgctat cggtctgaaa gacgttacta
    15121 ccggtgaaac cttgtgtgcg gaaagcgcgc cgattatctt ggaacgtatg gaattccccg
    15181 agccggtaat ccatattgcc gttgagccga aaaccaaagc cgaccaagag aaaatgggta
    15241 tcgccctgaa ccgcttggct aaagaagacc cttctttccg cgttcgtaca gacgaagaat
    15301 ccggtcaaac cattatttcc ggtatgggtg agctgcactt ggaaattatt gttgaccgta
    15361 tgaaacgcga attcggtgtg gaagcaaata tcggtgcacc tcaagtggct taccgtgaaa
    15421 ctatccgcaa agccgttaaa gctgaataca aacatgcaaa acaatccggt ggtaaaggtc
    15481 aatacggtca cgttgtgatt gaaatggaac ctatggaacc gggtggtaaa ggttacgagt
    15541 ttatcgatga aattaaaggt ggtgtgattc ctcgcgaatt tattccgtct gtcgataaag
    15601 gtatccgcga tacgttgcct aacggtatcg ttgccggcta tcctgtagtt gacgtacgta
    15661 tccgtctggt attcggttct taccatgatg tcgactcttc ccaattggca tttgaattgg
    15721 ctgcttctca agcgtttaaa gaaggtatgc gtcaagcatc tcctgccctg cttgagccga
    15781 ttatggcagt tgaagtggaa actccggaag aatacatggg cgacgtaatg ggcgacttga
    15841 accgccgtcg cggtgttgta ttgggtatgg atgatgacgg tatcggcggt aaaaaagtcc
    15901 gtgccgaagt acctctggca gaaatgttcg gttactcgac cgacctgcgt tctgcaaccc
    15961 aaggccgcgc tacttactct atggagttca agaaatattc tgaagctcct gcccacatag
    16021 ctgctgctgt aactgaagcc cgtaaaggct aatcaggcaa ataggccgtc tgaaaggctg
    16081 aaatgatttt tcagatggca ttgttcttta atcgatcttt aatgtaaagg aattagctca
    16141 tggctaagga aaaattcgaa cgtagcaaac cgcacgtaaa cgttggcacc atcggtcacg
    16201 ttgaccatgg taaaaccacc ctgactgctg ctttgactac tattttagct aaaaaattcg
    16261 gcggcgctgc aaaagcttac gaccaaatcg acaacgcacc cgaagaaaaa gcacgcggta
    16321 ttaccattaa cacctcgcac gtagaatacg aaaccgaaac ccgccactac gcacacgtag
    16381 actgtccggg tcacgccgac tacgttaaaa acatgattac cggcgccgca caaatggacg
    16441 gtgcaatcct ggtatgttct gctgccgacg gccctatgcc gcaaacccgc gaacacatcc
    16501 tgctggcccg tcaagtaggc gtaccttaca tcatcgtgtt catgaacaaa tgcgacatgg
    16561 tcgacgatgc cgagctgttg gaactggttg aaatggaaat ccgcgacctg ctgtccagct
    16621 acgacttccc cggcgacgac tgcccgatcg tacaaggttc cgcactgaaa gccttggaag
    16681 gcgatgccgc ttacgaagaa aaaatcttcg aactggctac
//
LOCUS       DAWGBY010000035        16628 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.035, whole genome shotgun sequence.
ACCESSION   DAWGBY010000035 DAWGBY010000000
VERSION     DAWGBY010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16628
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.035"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(446..3235)
                     /gene="ileS"
                     /locus_tag="WHG62_000971"
     CDS             complement(446..3235)
                     /gene="ileS"
                     /locus_tag="WHG62_000971"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ1725100.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDKPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGDHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMSVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKGELLSAEDCEHYDKLSDTMDVWFDSGSTHYSVVKQREELDWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
     gene            complement(3376..4296)
                     /gene="ribF"
                     /locus_tag="WHG62_000972"
     CDS             complement(3376..4296)
                     /gene="ribF"
                     /locus_tag="WHG62_000972"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ1725101.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIEADMEAAKCW"
     gene            complement(4372..4587)
                     /locus_tag="WHG62_000973"
     CDS             complement(4372..4587)
                     /locus_tag="WHG62_000973"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725102.1"
                     /translation="MRTGPDSRLRGNDGGGLFVSVYLVKKERFSLMLHQVWGDVSTHS
                     TAPAARFCAFGAFGGGKFAYFSRVGRA"
     gene            complement(4824..6119)
                     /gene="tyrS"
                     /locus_tag="WHG62_000974"
     CDS             complement(4824..6119)
                     /gene="tyrS"
                     /locus_tag="WHG62_000974"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ1725103.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     SQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGTKPEAQRILAEEMTRLIHGEAALQAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(6182..7963)
                     /locus_tag="WHG62_000975"
     CDS             complement(6182..7963)
                     /locus_tag="WHG62_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ1725104.1"
                     /translation="MAAGRVSRCRYILRDFRLFDDDDSSPRNVGGGGRFSLKAFYIRR
                     IKRILPAFFAVLAATLTGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFDPAQ
                     EEKPLLHIWSLSVEEQFYFVFPILLLLVARKSPRVQFGFLAALCALSLAASFMPSAFD
                     KYYLPHLRACEMLVGSLTAVWMRCRQPAVGRRCAAAGALFAVCILSTCLFSYSEQTAY
                     FPGPAALIPCLAVAALIYFNHYEHPLKKFFQWKITVAAGLISYSLYLWHWPILAFMRY
                     IGPDNLPPYSTAAAIVLILLLSLISYHCIEKPFKKWKGSFAQSVLWIYALPMLILGAG
                     SFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLVLGDSHADHYKTF
                     FDAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPLYSKVVLAM
                     RWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSS
                     RIPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPANFQIGGLPVYSDKD
                     HINPYGGTELAKRFSEKQRFLDTRHNH"
     gene            complement(8063..8167)
                     /locus_tag="WHG62_000976"
                     /pseudo
     CDS             complement(8063..8167)
                     /locus_tag="WHG62_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8419..9510)
                     /gene="ychF"
                     /locus_tag="WHG62_000977"
     CDS             complement(8419..9510)
                     /gene="ychF"
                     /locus_tag="WHG62_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ1725105.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            complement(9624..11300)
                     /locus_tag="WHG62_000978"
     CDS             complement(9624..11300)
                     /locus_tag="WHG62_000978"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ1725106.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSSGAGFIVALCGNMMKMPGLPKVPAAEKIDVDAEGVIHGLF"
     gene            11475..11906
                     /locus_tag="WHG62_000979"
     CDS             11475..11906
                     /locus_tag="WHG62_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ1725107.1"
                     /translation="MGSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGHNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLNERPSTQEWIGLGLVTAGVLVLALKR"
     gene            complement(12152..12847)
                     /locus_tag="WHG62_000980"
     CDS             complement(12152..12847)
                     /locus_tag="WHG62_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ1725108.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEEALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGDAPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLADNPPHNPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(12863..13363)
                     /gene="hpaC"
                     /locus_tag="WHG62_000981"
     CDS             complement(12863..13363)
                     /gene="hpaC"
                     /locus_tag="WHG62_000981"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ1725109.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALVHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            complement(13478..13918)
                     /gene="nadR"
                     /locus_tag="WHG62_000982"
     CDS             complement(13478..13918)
                     /gene="nadR"
                     /locus_tag="WHG62_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ1725110.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            complement(14261..14770)
                     /locus_tag="WHG62_000983"
     CDS             complement(14261..14770)
                     /locus_tag="WHG62_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ1725111.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            complement(14849..14924)
                     /locus_tag="WHG62_000984"
     tRNA            complement(14849..14924)
                     /locus_tag="WHG62_000984"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14889..14891),aa:Lys,seq:ttt)
     gene            15135..16214
                     /gene="apbC"
                     /locus_tag="WHG62_000985"
     CDS             15135..16214
                     /gene="apbC"
                     /locus_tag="WHG62_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ1725112.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIAAAVADSVQEILMPETGGAHIHLSIDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICTNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGATAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
BASE COUNT         3809 a         4542 c         4456 g         3821 t
ORIGIN      
        1 cactatagat tcccacttcc gtgggaatga cggttcagtt gcattccgac aacaccgtaa
       61 tcttgaaatc cgtcattccc gcgcaggcgg gaatccagac ccctgacgcg gcgggaatct
      121 atcggaaatg actgaaaccc cgagattcta gattcccact ttcgtgggaa tgacggttca
      181 gttgcgttcc gacaacaccg caatctcgaa atccgtcatt cccgcacagg cgggaatcca
      241 gacccacgac gcggcgggaa tctatcggaa atgactgaaa cctcgagatt ctagattccc
      301 actttcgtgg gaatgacggt tcagttgcat tccgacaaca ccgcaatctt gaaacccctc
      361 cgccgttata aagacaaatc acggcacaaa aaatgccgtc tgaaatgctg ttcggcggtt
      421 tcagacggca tttgctcaaa ctttatcagg cgtaatggcg cgtttcgcct tctccgccga
      481 cattctctgc acagcgtttg cagacggttt catagcctgc aaccgcgccc acatcgcggg
      541 tgtagtgcca gcagcgttcg catttttcac catcactggc tttagcggca acggcaagtt
      601 cgctgcctac tttcacttct gctttagaca ccagcaaagc aaagcgcaat tcttcgccca
      661 aagcattcag atagccggcc atttcttccg gcgcggtaat ttcggcttcg gcttgcaagg
      721 acgaaccgac ggttttgtcg gcgcgcaaag gctcgatggc ggcggttacc gcttcgcggg
      781 cttcgcggat tgccgtccat tttttcacca gttcggcttc ggctttttcg ttgatggtcg
      841 ggaactcgtg ccaggtgtgg aagaggacgc tgtcttcttc gccgccgccg atgatgtccc
      901 acgcttcttc gccggtaaag cacaaaatcg gcgcaatcaa gagaaccaaa ctgcgtgtga
      961 tgtgatacag ggcggtttgc gcgctgcggc gggcgcggct gtcggctttg gtggtgtaga
     1021 ggcggtcttt caggatatcg aggtagaacg cgcccaagtc ttccgagcag aaagaaacaa
     1081 tgtctttcac ggcaaaatgg aaggcataac gcggatagta atcgcctgcc agacgctctt
     1141 gcagctgacg tgccaatacc acggcgtagc ggtcgatttc caccatgtct gcctgttgca
     1201 cggcatcttc aataggattg aagtcgctga ggttggcaaa caggaagctc aaggtgttgc
     1261 ggatacggcg gtagctttcg gttacgcgct tgaggatttc tttggaaatc gccaattcgc
     1321 cgctgtaatc ggtggatgcc gcccacaggc gcaggatgtc cgcgccgaac tcgttataca
     1381 cttcttgcgg cgcgacgacg ttgccgatgg atttcgacat tttgcgcccg ttttgatcca
     1441 ccacgaaacc atgggtcagc agctgtttgt acggcgcgcg acccattgat gaggcgcagc
     1501 cggtcagcat ggacgactga aaccagcccc ggtgttgatc gctgccttcg aggtacaagt
     1561 cagcaggcca gtccaattct tcgcgctgtt tcacaacgga ataatgggtc gaaccggagt
     1621 cgaaccatac gtccatcgtg tcggagagtt tgtcgtaatg ttcgcaatct tccgcgctca
     1681 acaattcgcc cttatcgagg gagaaccaag cctcgatgcc tttttcttcg atgcgttgcg
     1741 cgactttttc caaaagttcg gcagagttcg gatgcagctc gcccgtttct ttgtgaacaa
     1801 agaaagtcat cggcgtgccc caatagcgtt ggcgcgaaac cacccagtcg gggcggcctt
     1861 caatcatggc ttccaaacgc gcacgacccc atgatgggaa aaattcagtg tcatcaacgg
     1921 ctttgatggc tttatcgcgc agggttttac catcggcacc tgctttatcc ataccgacaa
     1981 accattggcc ggtcgcacgg taaatcaacg gcgttttgtg acgccagcag tgcgcgtagc
     2041 tgtgttcgat tttgctgctt gccaagaggt tgccggtttc ttccaaccat tgcaggataa
     2101 cgggattggc ctcccaaacg ctcatgccgg caacgcgcgg cgtttcactg atgtatttgc
     2161 cttcggcgtt gacggggttg taaagctcga tgccgtattt attgcagacg gcgtagtctt
     2221 ccaaaccatg agcaggcgca gtatgcacca aaccggtacc ggcgtcggtg gtaacgtggt
     2281 cgccgttgag catgggaata tcgcgttcga ggaacggatg attcatgtgc aggttttcca
     2341 gcttgtcgcc agtggtttcg gcaagaatag caatgccgtc tgaaaaaccg taacgtttga
     2401 gcgcgtcttc tgccaaatct ttcgccagca ccaatttgcc tttgggcgta tcgattaatt
     2461 gatacaccac gtccgcaccg gcagacacgg cttggctcgc tggcagcgtc caaggcgtgg
     2521 tcgtccagat gacggcaaac gctttgccct cgatgcctgc caaaccgaat gcagcggcaa
     2581 gcgcagcggt gtctttaaac ggatagccca cgtcaatcgc aggcgatact ttgtctttgt
     2641 attccacttc ggcttcggcc aatgaagagc cgcagtccaa gcagaactga accggtttcg
     2701 cgccgcggta gagatagccg gatttgtaga tttcgccgag catacgcacg gtatcggctt
     2761 cggttttaaa atccatggtc aggtagggct tgtcccagtc gcccaacacg cccagacgga
     2821 taaagtcttt tttctggcgg gcaacttgtt cggcggcata ttcgcggcac aattcgcgga
     2881 aacgcgcttt gggcatgtct ttgccgtgca gcttttctac catcacttcg ataggcaaac
     2941 cgtgacagtc ccaacccggc acataaggcg cgtcaaaacc ggcttgggtt ttgctgcgga
     3001 taatgatgtc tttgagaatt ttgttgacgg cgtgaccgat gtggatgtcg ccgttggcat
     3061 acggcgggcc gtcgtgcagg atgaacttcg gacgaccttt ggcgatttcg cgcagttttt
     3121 ggtagcgttt ttgctcgtac cagcttttca gccatgcagg ctcgcgcttg gcaagattgc
     3181 cgcgcatcgg aaacgggctt tcgagcaggt ttacggtttt gctgtaatcg gtcatttttt
     3241 aatctctatt gttacaatat ttcggttcag acggcattgc gcctcaaaca gtatttcaca
     3301 acgggaaacc cctatgccgt ctgaacagtt aaaaggttga ttgtagccca atcggatggt
     3361 ttgtataagg tttttctacc aacactttgc ggcttccata tcggcttcaa tctgcctttt
     3421 cagttcttcc ataccgtcaa acttttcctc atcgcgcagt ttgtgcagga agcggacgtt
     3481 caaccgttgt ccgtacaaat cgccttgaaa gtcgaacagg tggacttcaa gcttttgaga
     3541 acagccgcta tcaacggtgg gattgaaacc gaagctcgcc acgccgcgcc gcgtgccgaa
     3601 tgcgccgtcc gcttcgacga caaacacgcc gccgagggca taacggtggc ggggcaggcg
     3661 gatattggcg gtcggggcgt ttaaggtgcg tccgagtttt ctgccgtgca ccaccctgcc
     3721 gctcaagacg tagtcgtgtc ccaaaagttt tttcgcatag gcaaggttgc cgtctgaaag
     3781 ggcttggcgg acggcggtgc tgctggtgcg gatgtcttcg acgatgacgg aaggcgtacg
     3841 ctcggtctgc atatcgggct gttgtgccaa aagttcaaaa cagccttccc gccccgcacc
     3901 gaaacggaaa tcgtcgccga cgagcaaata acgcgtattc aaggtttgac gcagcaggcg
     3961 gtcgataaac ccttgcgcgg atatttcgga aaaattttga tcgaaacgca aaacccagac
     4021 ggcatcgaca cagcctgtgc cttccaataa ttcgagcttg gtgcgcaggg ggctgatccg
     4081 acacggtggc atcctgccgg tgcggagtgc gaaaaattct ttgggttggg gttcgaaaac
     4141 gacggtcacg acgggtaatc cgcgcgtatc ggcttcgagg cggagttttt ggaggatgtg
     4201 tttgtgtcca aggtgtacgc cgtcgaaatt gcctatggtt acggcggccc cgtgcggaaa
     4261 gtcgggcgcg ttgtgccgcc ccagcctgat tctcattgtt gcgttcgggt atgtggtgaa
     4321 acaggcggtc attgtaaacg gtattgcggt ttatagacag tgtgccgccc gttacgcccg
     4381 cccgacgcgg gaaaagtagg caaatttccc gccgccgaac gcgccaaacg cacaaaaacg
     4441 cgcagcaggc gcggtgctat gtgttgaaac atcgccccaa acctgatgca acatcagtga
     4501 aaatcgttct tttttaacca ggtaaaccga gacaaacaac cctccgccgt cattcccgcg
     4561 caggcgggaa tccggacctg tccgcacaga aacttatcgg ataaaaacag ttgctcaaac
     4621 cccgagattc tagattccca ctttcgtggg aatgacggtt cagttgcgtt ccgacaacac
     4681 cgtaatcttg aaactcgtca ttcccgctca ggcgggaatc tagaacgtgg aatctaagaa
     4741 accgttttgc ccgataagtt tccgtgcgga caggtccgga ttcccgcctg cgcgggaatg
     4801 acggcatttc tgcggcaatc ggattatttc caaaccaaaa gcgcgtggtt gcgtttgccg
     4861 cgccgaagga tggtgtattt gccgaaacgt ttgtgttcgc cgttcagcag gcaggcatcg
     4921 tcggggcgtt cggcggcgtg gttggggttg ttggcttcgg caggtttgcc gttgagcaaa
     4981 accgctttgc tgttcacaaa gccgcgcgct tctttattgg aggatgccaa accggttttg
     5041 accaaggctt cgacgacatt gatgccgtct gaaacttcaa atgcaggcag gccgtcgagg
     5101 gcgagctgtt caaagtcgct ttcagtcagg ctgctttgat cttcggcaaa caggctttcg
     5161 gaaatgcgct gtgcggcttg tagggcggct tcgccgtgaa tcagtcgggt catttcttcg
     5221 gcgaggatgc gttgcgcttc gggcttggtg ccactggctt tatctttcgc ttcgatggcg
     5281 tcgatttctt cgatggacag gaaggtgaag tatttcagga atttataaac atcggcatcg
     5341 gcgactttca gccagaattg gtagaactga tacggcgagg tttttttcgc gttcagccac
     5401 accgcgccgc cttcggtttt gccgaatttg gtgccgtctg atttggtaac caaaggcagg
     5461 gtcaggccga atacttgttt ttggtgcaga cggcgggtca ggtcgatacc ggcagtgatg
     5521 ttaccccatt ggtcggagcc gccgatttcc aaaaccgcgc cgtggcgttt gttcaactcg
     5581 gcgaagtcgt aaccttgcag cagggaatag gcgaactcgg tgaaggaaat gcctgcgccg
     5641 tcgcggtcga tgcgctgttt gacggattct ttgttcagca tggcgttgac ggagaaatgt
     5701 ttgccgatgt cgcgcaggaa gtcgaggcag ttcattttgc cgaaccagtc ggcattgttc
     5761 gccataatgg cggcatttcc gccttcaaag ctcaagaaag gggttaattg gctgcggatg
     5821 ctttctaccc agccggcaac agtttcggcg gaattcaagc tgcgttcggc ggctttgaag
     5881 ctggggtcgc cgatcatacc ggtcgcgccg cccaccagtg caatcggcgt atgccccgcc
     5941 tgttggaagc ggcgcaatgc caatacgggc agcaggtgtc cgatgtgcag gctgtcggcg
     6001 gtcgggtcga agccgcaata aagggaaatt ttttgttcgt tcaacaaagc gtctaaggct
     6061 tcgatgtcgg tggtttgcgc gattaggccg cgcgattgca ggtcttggat gacgctcatc
     6121 ggtctctttc aaaaaaaatt agcggttttg caaaccgccg attgtaacaa atttaagcga
     6181 atcaatggtt atggcgcgta tcgagaaacc gttgtttttc ggaaaaacgc ttcgccaatt
     6241 ccgtgccgcc gtaagggttg atgtggtctt tgtccgagta aaccggcaat ccgccgattt
     6301 ggaaatttgc ggggatatag gcggcggcat caataatata gacgttgggg tatttggctg
     6361 ccaattccct gatgcgtgca ttggctttca gagtgctttc gtcgtccggg cgcagggttt
     6421 ggcggtaacc cggtatgcgt gaagacaaga tataggcgcg ttgtacgttg taagacgagg
     6481 caaggttgtc cgccatcagg taaacggctt gtttttcgga tgagagtttg tgcagcatac
     6541 ggtcgaattt ttggaaaaaa ccggcatcgt aggcaaggga gcggctgttt tcgggcattt
     6601 ggctgcccca gcgcatcgcc aaaaccactt ttgaatacag gggcaggtgt tcttcggcat
     6661 agcggtaaac ggcgcggcag gcggcccagt tttggaacac acgggacgcg tagccttcca
     6721 cataggcgca agcgtcggcg gaaaccatag tggcggacca tttttctttt ttgcccacgg
     6781 catcgaagaa tgttttgtaa tggtcggcgt gggagtcgcc caaaaccagc agctccggct
     6841 gtttttccgt atccccccac aggcattgtt tgccggtatt gttgtggcag gaggtgttgg
     6901 aacgcgtcag ccccaagcgg tcgtattgcg ccataaacgg cagcctcatc gcgaaaaacg
     6961 agcccgcccc caaaatgagc ataggcaagg cataaatcca taaaacggat tgtgcgaacg
     7021 aacctttcca ttttttaaac ggcttttcga tgcagtgata agaaatcagg gaaagcagca
     7081 atatcaggac gattgctgcc gctgttgaat aaggcggcag gttgtccggg ccgatatagc
     7141 gcataaaggc caatatcggc caatgccaca gataaagcga ataggaaatc aaaccggcgg
     7201 caacagtgat tttccattgg aaaaattttt taagcgggtg ttcgtaatga ttgaaataaa
     7261 tcagcgcggc aacagccaga cagggaatca aagcggcggg gcccgggaaa taggcggttt
     7321 gttccgaata ggaaaacagg caggttgaca atatgcacac ggcaaacaat gcgccggcgg
     7381 cggcacagcg tctgccgacg gcaggttgcc ggcagcgcat ccacacggcg gtcagcgatc
     7441 cgaccagcat ttcgcaggcg cgcaggtggg gcaggtaata tttatcgaac gcggaaggca
     7501 taaaggaagc ggcaaggctt aaggcgcaca atgcggcgag gaagccgaac tgtacgcgcg
     7561 ggcttttgcg ggcgacaagc agcagcaata tcggaaagac aaagtaaaat tgttcttcga
     7621 ccgacaaaga ccaaatgtgc agcaagggct tttcttcctg cgcgggatcg aaataatcct
     7681 tcccccttgc aaaatacagg ttggaggcga aacccaaggc ggtcagcgcg gatttccata
     7741 aaagaaagaa atcatctttg gtgaataaaa agaagccgcc tgtcagcgtt gccgccaata
     7801 cggcgaaaaa tgcgggcaga atccgtttga tgcggcggat ataaaatgcc ttcagggaaa
     7861 acctcccccc ccccccgaca tttcgcggtg aagaatcatc gtcatcaaaa agcctgaaat
     7921 cacgaagaat atatcgacac cgagaaaccc gcccggcagc caattttttt cgatatggaa
     7981 cacgatgacg gacaagacgg cggcggcgcg caatgtgtcg atgtccgggc ggtagggtaa
     8041 ggcttggctc ataatgtttt tatagtggat taaatttaaa ccagtacggc gttgcctcgc
     8101 cttgccgtac tatctgtact gtctgcggtt tcgtcgcctt gtcctgattt aaagttaatc
     8161 cactatactc gaaacgcggc ggcgcaaatg ccgtctgaaa ggtcattttg tacgggatat
     8221 tcggaatgcc ggacggcttt ttgcaacagc ggggcaggcg gtttgttttg caggaatcgg
     8281 ggagggcaaa tcggaaatgc gggtgggatt ttattttgat gcagccgcat tccggcggta
     8341 tggaaacgcc gaaaaccacc aaaaccggct tcagacggca tttctggcaa agccgtctga
     8401 aaacctgccg catttgggtt acacgttaaa caaaaagtgc atcacatccc catcctgcac
     8461 gacgtattcc ttaccttcca cacgcatttt gccggcttct ttggctttgg cttcgccgcc
     8521 gagcgagaca aaatcatcgt aggcaatcac ttgggcgcgg atgaagccgc gttcaaaatc
     8581 cgtatgaatc acgccggcgg cttgcggggc ggtgtcgcct ttgtgtatcg tccacgcgcg
     8641 gacttctttc acgccggcgg tgaagtaggt ttgcaggccc aagaggtcgt agccggcgcg
     8701 gatcaggcgg ttcaggccgg gttcttccaa acccatttcg gcgaggaatt cggctttttc
     8761 gtcgtcttcc aattcggcga tttcgctttc catcgcggcg catacggcga cgacgggggc
     8821 gttttctttt gccgccaatt ctttcaggcg gtcgaggtgc ggattgtttt caaaaccgtc
     8881 ttcggcgacg ttgcccacat acatcgcagg tttggctgtc agcaggaaca gcggtttgag
     8941 catcgcgcgt tcttccgcgt ccaaaccgaa ggaacgcacg ggtttgcctt cgtccagatg
     9001 cggcagcagt tttttgcaca aatcgaccag cttttgcgcg tctttgtcgc ctgaacgggc
     9061 gcgtttttct tcgcggacga tggctttttc cacacttgcc aggtcggcaa gtgccaactc
     9121 tgtgccgatg gtttcgatgt cggcaatcgg atcgacgcgg cctgcaacgt ggacgatgtt
     9181 gtcgtcgtca aagcagcgca cgacattcac aatcgcatcg gtttcgcgga tgttggcaag
     9241 gaactggttg cccaagccct cgcctttgct cgcgcctgca accaaaccgg caatatcgac
     9301 aaattcgacg atggcaggct gcattttttg cggattgacg atttttgcca attcggccat
     9361 acgcggatcg gggacttcga cgatgccgac gttgggttcg atggtacaga aaggatagtt
     9421 tgccgcttcg atacccgatt gggtcagcgc gttaaaaagg gtggatttgc cgacgttggg
     9481 caaaccgacg atgccgcatt tcaaactcat gttttttcct gaaaatagag aaatttaacg
     9541 gcggattata gcataccgcc gcccgcgttc cgaaaaaatg ccgtctgaaa cggcttcaga
     9601 cggcatctag tttcaaaaac cgttcagaac aagccgtgaa tcacgccttc tgcgtccacg
     9661 tcgattttct cggcggcggg aactttgggc agacccggca ttttcatcat attgccgcac
     9721 aacgcaacga tgaaaccagc accggaagaa acggtaatgc cgcgcacggt aatgcggaag
     9781 ccttcagggc agcccaagag tttggcgttg tcgctcaaag aatattgggt tttcgccatg
     9841 caaatcggca ttttgtccaa gcccagtttt tccagcgagg cgatttcggc agacgcttcc
     9901 gcgctgaaat caacatcttc cgcgccgtac actttttggg caatcgcacg gattttgtct
     9961 ttaatactca gctcaacatc gtaggaaaaa ttgaagttgt tcggttggtt ttcgatggcg
    10021 ttgacgactt tgcgcgccaa gtctgcaccg cccacgccgc ctttgcccca cacttcggtc
    10081 aaggaaactt caacgccgtg ttcggcacag gctttttcaa tcatcgccaa ctcggcatcg
    10141 gagtcggaca cgaagcggtt gagcgcaacg acgacgggca gtccgaatac gtttttcagg
    10201 ttggaaatgt gtttcagcag gttgggcaaa ccttttgcca aggcttcgag gttttcttca
    10261 ccgaggttgg cacgttccac gccgccgttg tatttcaaag cgcggacagt cgccacgacg
    10321 accgccgcat caggtttcaa accggcaagg cggcatttga tgtcgcagaa tttttccgcg
    10381 cccaaatccg cgccgaagcc tgcttcggtt acggcgtaat cggcaaggtg tttcgccaga
    10441 cgggttgcgg ttacggagtt gcagccgtgg gcgatgttgg cgaacgggcc gccgtgtacg
    10501 aaggcgggcg tgccttcgat ggtttgcacc aaattgggct taatcgcatc tttgagcagg
    10561 accgccattg cgccgtgtgc cttcaaatct ttggcgtaaa cggggctgcc gtctttggcg
    10621 taggcgacga ggatgttgcc caaacgctct ttcaaatcgc tgatgtcttt ggcaaggcag
    10681 aataccgcca tcacttcgga ggcaacggtg atatcaaaac cgtcggggcg catcacaccg
    10741 tcaacgggtt tacccatgcc gtcgatgatg ttgcgcaact ggcggtcgtt catatcgacc
    10801 acgcgccgcc acagcacgcg tttggggtcg atgtccaact cgttgccctg atagatatgg
    10861 ttgtcgagca tcgcggcaag caggttattc gccgcaccga tggcgtgaaa atctccggtg
    10921 aagtgcaggt tgatgtcttc catcggcaaa acttgggcat agccgccgcc tgccgcaccg
    10981 cctttcacgc cgaacaccgg acccaaagaa ggctcgcgca gggcgataac cgaatctttg
    11041 ccgatatggc gcaacgcgtc cgccaaaccg atggttacag tggttttacc ctcacccgca
    11101 ggagtcggat taatggcggt aaccaaaatc agcctgcctt gtttttgcgg cagtttgaac
    11161 gcttcggcag gattgatttt cgccttgtaa tgaccgtaag gctcaatgtt gtcggcattc
    11221 agaccaagct tggcggcaat ttcgccaatc gggcgcatgg tggaggattg ggcgatttcg
    11281 gcatcggttt tgaagctcat gattttcctt tagaaatgag gagggacatg ccgtctgaaa
    11341 gcatcaggcg acaaacaggt ggattgaaaa taatatcagg catattataa cgttatccgc
    11401 accaaacccg cagtgaaatt tttgacgctg caacaaaaat accgttcata ttgttcacaa
    11461 tccaaggaga aaacatgggc agcaacgcat ggctgttttg ggcattggca tcggcaggct
    11521 tcgcctcatt gaccgccgtt ttcgccaaaa tgggcttgca gggtatagat tcagatttcg
    11581 ctaccttcat ccgcaccttg gtcatcctcg ccgctttggt actgtttttg acctacaccg
    11641 gcaaatggca gggcgtgaac ggctttacgg ggcacaactg gacattcctt atcctatccg
    11701 gccttgctac cggcgcatct tggcttgcct acttcaaagc cctgcaactg ggtaacgcct
    11761 cgcaagtcgc ccccgtcgat aaattcagcc tggttctggt cgccctgatg gcagtagtct
    11821 tcctcaacga acgccccagc acgcaggaat ggataggctt ggggctggta acggcgggcg
    11881 tgttggtgct ggcgttgaaa cgttaaaccg aatccgccat accgcctgaa accgggtttt
    11941 gacaatctga cgggcggcgg tctgaacaaa gttacccaat aaaatccgac accgcgccga
    12001 cggcaaaccg ccgcatccga caggggtcgg cttcagatgg catttgttgg acggaaagcc
    12061 ccgaacgccc tattttcacg cctccacgaa aatatgccgg acatccggtc ggaaccgttc
    12121 ggcagccggc tcggcaagcc accgttttat ttcacttcca agcccctgca agggcttgag
    12181 cctctttcag acggcatacc gtgccgacat ccagccacaa gcccgtatgc ttctgtccgc
    12241 tgacgcggtt ttgccgcatt tcgccccgca atacgggcgc gagtttcgcc acactgcccg
    12301 cttcgattcc atcaaacatt tcaggacggt aaatacccac gccgctaaat gtcaatccgt
    12361 tgccgccatt tacttccggc cgcacgctgc cgtcgggcag cagggaaaaa tcgccgtcgg
    12421 ggttgtgcgg cggattgtcc gccagccaca gatgggcgga aatgtgctcg ggcagggacg
    12481 atgccgcctg aaacgcggcg gtaaaatcga tgtcggtcag cacgtcgcca ttgacgacca
    12541 aaaacggggc atcgcccaac agcggcaatg cctgcgcgat gccgcctgcc gtttccaagc
    12601 cgcctgcggg ttcgggcgaa taggcgatgt tcacgccata agccgagccg tcgcccaaag
    12661 cctcttctat ctgccgacct aaccaagcat ggttgatgac gatttcggta aaccccgcct
    12721 gcttcagacg gcataggtgc caaccgatta gaggcttacc cgccacatcg agcagcggct
    12781 tcggagtggt atcggtcaaa gggcgcatac gctcgccgcg tcctgccgcc agtatcatcg
    12841 ctttcatata tctgtccgaa tatcagtcta aaaatctaaa ctgccgtctg aaatacagca
    12901 gcgcggggcg tttgcacccg cagtttttga tttcgtcgag cctgacgtaa aacacaaaat
    12961 gcgtgccgat ttcatgtttg ccgacaatat gcccgtgcag gtgcaccaac gcgccctcta
    13021 tttcaagttg tcccgttttg ccgcgatgcc agatgtggta ggcaaaccgc tcttcgggcg
    13081 acaggccggt cagcccggca aaatgttcgg caacatcctg atgttcgtcc gccagcgtat
    13141 tgatgcagag gctgccgttt tccgacagga tcggaatgat tcgcgcactc cggttgatgc
    13201 acagcatcac ggtcggcggc tcgtcggtaa ccggcgcaac cgccgtcatt gtaatgccgt
    13261 aacgccctgc cgcaccgtct gtcgtgatga catgaacgcc tgccgcacaa gatgccatcg
    13321 catcacggaa cgaagtttga aaagttttct gcaaatccgc catttttccc ctttaaactg
    13381 tcccctatat aagaatgctg cacacaaggc accccccatg tgcagcagtt ctgattcaaa
    13441 aagccgtcgg tcggacattt ccgcgcgtta cggcgtatta cgagttcaac gcatcctcga
    13501 ttttggcaag ttctgccaac aggtctttaa gcagcagcat tttctcgcgg cccagcactt
    13561 cctcgatagc gtcgtaacgc tcgtccactt cttcgccgat ttcctcatac agcttctcgc
    13621 cctcggcagt cagcttcaga aaaacacgtc gttggtcgtt ggaaggtttc aggcggacaa
    13681 ccaaacccgc tttttcaagg cgggtcagga taccggtcag gctggggcgc agaatacacg
    13741 cctgattcgc caaatcttga aagtccagcg tgccgttttc cgccaaaaga cggataatcc
    13801 gccattgctg atcggtaata ttcgcctgat tcagaatagg cctgaattgg gtcatcaggg
    13861 cttcccttgc ctgtatcaga ctgatattga tagacgcatg ttttgattgg gtaggcattg
    13921 ttcaagtctc caagttatcg aaaatcaaac tttcaaaccg tcgggaaagc ctgtgggcgt
    13981 aaattttgat gcaaccgtta tataacaaaa cgaacatata gcaacaatac gctataaacc
    14041 gcatcggacg actgggtata aaagacttta attccgataa tcctatctaa aaatatttta
    14101 atagttatat cttagtctat tttccctaca atctcaacaa agtattacat ttactgtcga
    14161 aagaactttc ttccagaaaa aacaaaagcc gccgcatcag acgagcaagg tatatgccgt
    14221 ttgattctct acatagcgta aagtttaaca aaaacaaaag ttaaccgaaa acatccgcct
    14281 gaaaaattcg tgcgcgcaag ccccaataac tgctgattcc cgtcgtatag tgaaccattt
    14341 tcccattttt gaccaaaacg acggcaggcg ttgcgacaat ccgccaagac cttgccaaac
    14401 ccccgtcctc atcgttgacc gtcggaaagc ccaagccccg ctttgccata tacgccgcca
    14461 cttcggacgc gctgccggaa cgtaccgcca cgccgacgac cggcacgccg tccgccgcca
    14521 aatcatcgat tatcggcgac tgataacggc acacgccgca ccagctcccc caaaaataca
    14581 ccaaaaccgc cttatctcgg ctaaactgtc ccaaagtcag ccgctgcccc gacagcaggg
    14641 tcaaaggccg ccctgccgca ccggcaggtt cgtcgggctt gcgtatccaa tccaaaaaca
    14701 gcgacaccaa taaaaacacc aatgccgtct gaacggcaaa tttgatgccc gaaagcagtt
    14761 tctttttcat acgctctctc aaacggtacg cccacgcaac cggcaggcaa acaaaaagcc
    14821 aagtctcaaa acttggcttc cggttatctg gtgggtcgtg agcgattcga acgctcgacc
    14881 aacggattaa aagtccgctg ctctaccggc tgagctaacg acccgataag ccgtgcatta
    14941 tacagcacca tcctacctcg tcaagcaaat tttacaggct taattgcaga ccactgtttg
    15001 cacgggatat tttgacaacg gattttcaca atccgccgca taccgtgtaa aagttcgcac
    15061 aaggaaaagc aaaccgcccg aaatcaatgt acactttccg cccgtttccc aaactgcaca
    15121 cagaaacaca cattatgaac atacaaaaca tccgcaccct cctcgacacc gtcgccgttc
    15181 cgaatacggc acgcacgctc ggcggcgaaa aggccgtccg ttcggtcgaa cagcgttcag
    15241 acggcatcca tatcgccctg catttcggct tccctgtcgc gcacatcgcc gccgccgtcg
    15301 ccgattccgt acaagaaatc ctgatgcccg aaacaggcgg cgcgcacatc catctgtcca
    15361 tagacaccga aatcggcaca cataaagtcc aacctggcgt taccaccatc aaaggtgtga
    15421 aaaacatcat tgccgtcgcc tccggcaaag gcggcgtggg caaatcaaca accaccgcca
    15481 accttgccgc cgcaatggcg cggatgggcg cgcgcgtcgg cgtgctcgat gccgaccttt
    15541 acggcccgag ccaaccgacc atgttgggtg tggacgaccg caaacccgat cagaaaaacc
    15601 aaaaactcat tcccgtcgaa tcttcagacg gcatacaggt catgtctatc ggctttctcg
    15661 tcgataccga ccaagccgtc gtctggcgcg ggccgatggt cagccaagcc ttgcagcaac
    15721 tgatgtttca aagcgagtgg gacgaagtgg actacctgtt tatcgacctg ccccccggca
    15781 cgggcgacat ccaactcacg ctgtcccaac gcatccccgt aaccggatcg gtcatcgtaa
    15841 ccacgccgca ggacatcgcc ctgatagacg cgcgcaaagc cgtggatatg ttccgaaaag
    15901 tcaacattcc cattttaggt gtattggaaa atatgtccgt ccacatctgc accaactgcg
    15961 gacacagcga agccctgttc ggcacggacg gcggcaaaga tttagccgca cgcctcaacg
    16021 tccccctgct cggacagctt ccattaagcc tgcccgtgcg cgaagccatg gacggagggg
    16081 cgacggcgca actgttcgac gaacaccccg ccatcgcccg aatctacacc gatgccgcat
    16141 tccaaatcgc cctgggcatt gccgacaaag gcaaagactt cagcagccgg ttccctaaaa
    16201 tcgtcgtcga ataaagccgc gtccgaaacc gcaacagcaa tgccgtccca agccccgcgc
    16261 ctgccgatat gccgtcattc ccgcgcaggc gggaatctag aacgtggaat ctaagaaacc
    16321 gtgttgtaaa ggcagaccga tgccgtcatt cccacgaaag tgggaatcta gaacgtaaaa
    16381 tctcaagaaa ccgttatacc cgataagttt ctgcaccgac aggtctggat tcccgcctgc
    16441 gcgggaatga cgattcgggt atttctgacg gttcgggcat tcccgacaag gtggattttc
    16501 aaggtgttgt atagggtgta ggaggattcg taaaaggtga gttatagggt gggcttcagc
    16561 ccaccgattc caacgattcc accaatccta caccgttccc atagactcaa atcaacacag
    16621 aaacttat
//
LOCUS       DAWGBY010000036        16144 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.036, whole genome shotgun sequence.
ACCESSION   DAWGBY010000036 DAWGBY010000000
VERSION     DAWGBY010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.036"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(333..755)
                     /locus_tag="WHG62_000986"
     CDS             complement(333..755)
                     /locus_tag="WHG62_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ1725113.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(873..1544)
                     /locus_tag="WHG62_000987"
     CDS             complement(873..1544)
                     /locus_tag="WHG62_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEZ1725114.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVWRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     RAAKP"
     gene            complement(1560..2186)
                     /locus_tag="WHG62_000988"
     CDS             complement(1560..2186)
                     /locus_tag="WHG62_000988"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ1725115.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCARYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDIAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2293..3111)
                     /locus_tag="WHG62_000989"
     CDS             complement(2293..3111)
                     /locus_tag="WHG62_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ1725116.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3370..3810)
                     /locus_tag="WHG62_000990"
     CDS             complement(3370..3810)
                     /locus_tag="WHG62_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ1725117.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSEPSVLLACGGNLPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3873..5279)
                     /locus_tag="WHG62_000991"
     CDS             complement(3873..5279)
                     /locus_tag="WHG62_000991"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ1725118.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDVHVFEEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFAEAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLACTAKAEAEKLGAHVKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAIVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLVDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEDYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5449..6564
                     /gene="lptF"
                     /locus_tag="WHG62_000992"
     CDS             5449..6564
                     /gene="lptF"
                     /locus_tag="WHG62_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ1725119.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGKFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6561..7631
                     /gene="lptG"
                     /locus_tag="WHG62_000993"
     CDS             6561..7631
                     /gene="lptG"
                     /locus_tag="WHG62_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ1725120.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGIWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7944..10529
                     /gene="acnB"
                     /locus_tag="WHG62_000994"
     CDS             7944..10529
                     /gene="acnB"
                     /locus_tag="WHG62_000994"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ1725121.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10671..11666
                     /locus_tag="WHG62_000995"
     CDS             10671..11666
                     /locus_tag="WHG62_000995"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ1725122.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(11735..11836)
                     /locus_tag="WHG62_000996"
                     /pseudo
     CDS             complement(11735..11836)
                     /locus_tag="WHG62_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11890..12903)
                     /gene="ilvC"
                     /locus_tag="WHG62_000997"
     CDS             complement(11890..12903)
                     /gene="ilvC"
                     /locus_tag="WHG62_000997"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ1725123.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(12983..13276)
                     /locus_tag="WHG62_000998"
     CDS             complement(12983..13276)
                     /locus_tag="WHG62_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ1725124.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            complement(13343..13834)
                     /gene="ilvN"
                     /locus_tag="WHG62_000999"
     CDS             complement(13343..13834)
                     /gene="ilvN"
                     /locus_tag="WHG62_000999"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ1725125.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            complement(13845..15572)
                     /gene="ilvB"
                     /locus_tag="WHG62_001000"
     CDS             complement(13845..15572)
                     /gene="ilvB"
                     /locus_tag="WHG62_001000"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ1725126.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDTLGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
BASE COUNT         3792 a         4366 c         4092 g         3894 t
ORIGIN      
        1 ggtttttgtt aatccactat aattcaataa attaatatat ggcttaaaat aacgggattc
       61 tcgcctcccg cccgccctca gaagcaggcg ggtatcattt taaaacgcgg catttaaaat
      121 ttgaccgaaa attgttgaca atccggaatc aagtctgcac aataccccga caagtccaag
      181 tattataaag gctgaataaa gaggaaacag caggcagata tattcgggag gtgcagtccg
      241 aatatatctg cttttttatg cgcctccgga ttgcctgccg cacctttccc ttcagacggt
      301 atcagccgtt tccccataat gccgcccgat gcctatttat ctgccccggc aatttcaaaa
      361 ctgtgggtaa tctttgccgc tttgcccaac ataatcgaag ccgaacagta tttttcggca
      421 gacatctgaa cggcgcgctc aatggccgat tctttcaaat catgcccgaa tactttgaaa
      481 tggatgtgga tttcggtaaa cacgcgcggc gcatcgtccg cccgtttcgc cgtaaccgtc
      541 gcacggcagt cagtcacttt ctgacgctgt ttttcggcaa tcatcaccac atcgatgctc
      601 gaacagcccg ccacgcccaa cagcagcatt tccaaagggc tgggcccgcg cttggccgca
      661 ccttctgccg ccgaaccctc cataacgacg ctgtgcccgc cttccgtcgt gccgacaaag
      721 cacattccgt ctatccattt tgatgtaacc tgcatggtgt cattcctgaa aatagcgtta
      781 aaaccgcttt gcatatggcg ttattgtaaa caatttcaag cggcttatgc agaaatatgg
      841 acaaaacggc aaaaaaacac ttgaaaaccg atttacggtt tggctgcccg gccgttgatc
      901 tgcaccgatt tgagtttcag cgtataggtt ttgccgtcgt cggtatagcc gatttgtgcc
      961 ggaatattgt tcagggacgg tgcgaagaaa tacattaccg tatcgtcgcc gcgccacacc
     1021 cgatatttga cgacttcggt ttccacgccg cctatgctgt attttcctgt acccgcctta
     1081 ttcaaaccgc cgacggaata aagttttttg ccgttggtga ttttcagccc cggggggagt
     1141 ttcgcgtcat ttgccgccaa ctgccaggca agcgtgaaca aatccatagc cttggggctt
     1201 tgctcggttt tgctctcgcc cgctttgccg taggttacgc tgccgtcggc gaatttggct
     1261 tccgcataca gtttgcccct gcgtatgtct ctatagtagg tagggtgcag ggtattgccg
     1321 acaaccgtac cgccggactc gaaacggata ttgtatagcg gcactttaat cgtcgaaacg
     1381 attttgtaag cattgccgct gcgttcaaat gtcatcgtgg cgggaatgcc gtagctgccg
     1441 gaatagtgca gcacggcgga ttggggcagc cctgccgcat acgcgcacgg cagggcggcg
     1501 gacaaaatgg cggcggaaaa tatattttta aaagtcttca tcatttgctc ccgcccggtt
     1561 tacgccgtca ggaaacgggc ggcatcggcg ttttccgaat ttctgacgcg gtttccctcg
     1621 ataatcaggc ggccggcggc aaaatcggca acggctttcg gataaagttt atgctcgaca
     1681 gccaaaaccc gtgcggcaat atcgtctgcc gtatcgccgt caagtatcgg cacaatccct
     1741 tgcgatacaa tcgggccgca atccagttcg gcagtaacga aatggatggt gcagccggca
     1801 acgcggcagc ccgcctccaa agcgcgttcg tgcgtatgaa gtccggtaaa cgagggcagg
     1861 atggacgggt gaatgttcat cagcctgcct tcgtaacggg cgcaaaactc gggggtcaga
     1921 atccgcataa aacctgccaa aaccaccaag tcgggttgat atgcgtcgat tttttccatc
     1981 atggccgtat cgaaggcaag tcgtgattca aagtttttat gattcaggct atcggtcggg
     2041 atgccgcgtt cggccgccca ttgcaaaccg gcagccgttt cgctgttgct caacacggcg
     2101 gcaatgcgga cgttgggaat ggcggcattg acgattgcct gcatattgct gccgcgtccg
     2161 gaaatcagga tgacgatgtt tttcataatg gtacgctttt gaaagggatg ccgtctgaac
     2221 cgctgtttgg tggtttcaga cggcatttgc cgtaaaaatg cccgaaaacc tgtttcgggc
     2281 atggattcgg acttaattta cttttttgat gtcgacttga gccggctgct tggcgggcgc
     2341 gttttcgggt gcgccgattt tgaccagttt cacatcaaat accaaagtgg cgttcgggcc
     2401 gattttgtcg cccgcaccct gttcgcggta ggcaaggttg gacgggatgt agaacgtggc
     2461 ttcgccgcct tctttcagaa gctgtacgcc ttcggtccaa cccggaatca cttggctcaa
     2521 agggaaggtg accgggccgc cgttggcttt gctgctgtcg aataccgtac cgtcaatcag
     2581 gcggccttcg tattccacgg taacgatgtc gtctttggtc ggctgtttgc cttcgccctg
     2641 tttggtgatt ttgtattgca ggccggaagc agtggtcttc acgccgtctt tggcggcatt
     2701 ttctttcaga aaggcttcgc ctttttcttt attggccttc gcgtccgcct tgtgtttttc
     2761 tacggcttta gcctgttgtt cctgaaggaa tttcatcatg acttcctgag cctgctcttc
     2821 ggtcattttg atttctttgc cgtcatacac tgcctgcatg gcttcggtaa agactttcaa
     2881 atcgatttcc gcgccctgtt ccttcatttg cttcagggag cgtccgatgt ccacgcccat
     2941 cgcatagctt gcctgctgca tcgtgctgcc gatcgaagag gtgtcgccct gcgcggaaga
     3001 agcggcggca ggttcggatg cagatgcggg ggcggcttct tttttgccgc aggcggaaag
     3061 tgccaaagcg gcggaaaggg tcagtgcgct gattttgaaa atggtgttca tgatggatct
     3121 tcgctgtcga taaggtcgga aaaacgggat tatagccgag tttgaatgtt tcaacacaca
     3181 ggatgacaca taaagcgtca atcgtgtgtt gccctgtttt ggaaaggatt gaaccttcca
     3241 aaataagttt tgattctacc gccccgaggg acagatgtcc aagtggcggg gttcaaccga
     3301 taaggaaatt ttaatcaaat agaatcaagc ctgtttaaat tttgtaaatg cggcatttca
     3361 gacggcattt tatgccttgc cctccatgcc gtgatgttcg atggcaaaac cgcttcggcg
     3421 gtaggcggta aagcgttcgc gcgcgtcggc gagatcttcc aagctgttgc cgacgatttc
     3481 caaaacgcgc gcgggcaaga ccggagcggt gttccaaaaa ccgtcggaca ggttcaaaac
     3541 ggtcatgcct tcgggaattc ggggcagatt gccgccgcag gcaagcagga cggatggttc
     3601 agacggcatg gcttcttccg tttcccaaat ttcgtgcgga atgaaactct cggcctcgta
     3661 ttgccaaagc attttgtcca attcctgaag ctgcccgaac gaatcggacc acaccagtat
     3721 cctgccgccg tcccgaatcg cacgggcaat caggcggcag gtgaaaatcg gaacttgggc
     3781 aacgtgcgtg taaaaggtgg ctttcggcat attgtttgag catttggcag gacgatgccg
     3841 tctgaaaggc ttcagacggc attgtggcaa aattaaagat tccgcagata gttcagcagc
     3901 aagggaacgg gacggccggt cgcacctttt tccgcaccgg atttccacgc cgtacccgcg
     3961 atgtcaaggt gtgcccatgg atagtcttcg gtaaagtagg ataggaatgt tgcggcggta
     4021 atcgtgcccg cgccgggcgt gccgatgttt ggaatgtcgg caaagttgga tttgagttgg
     4081 tctttgtagg tctcaaagag cggcagttgc cacgctttgt cgtccacgtt gtaggaagcg
     4141 gcaagcaggc tgtcgaccaa atcttgattg ttgcccatca cgccgctgac atcgtgcccc
     4201 aaggcaacaa tacacgcacc ggtcagggtg gcgacgtcga tgacggcttt gggtttgaac
     4261 tgttcggcgt aagtgagcgc gtcgcacaaa atcagacggc cttcagcatc ggtgttcaac
     4321 acttcgatgg tcaggccttt catgcttttt acgacgtcgc ccggtttgtt ggccgcgccg
     4381 gaaggcatat tttcacaagt ggcgacgatg gcaatcaggt tgatcggcag ttgcagtttg
     4441 acggcggcgc agaaggtgct gatgacggtt gccgcgccgc acatatcaaa cttcatttcg
     4501 tccatgttca gaccgggttt gagggaaatg ccgccggtgt cgaaggtaat gcctttgccg
     4561 accaagacga cgggggcggc ttctttgtcg gctgcaccga aatagctcag ttcgaccaaa
     4621 tagggatctt cgacactgcc tttggcgacc gaccaaaacg aacccatgtt ttctttgatg
     4681 tagtcttttt cgatgatttt gacgtgcgcg cccagttttt cggcttcggc tttggcggtg
     4741 cacgctaaaa attcgggcgt gcattcgttc ggcgcagcat tgcccaagtc gcggcagagg
     4801 ctttgtccgt aaacctgtgc ttcggcaacg cgcagggctt ctttgacggc ggcttcgtgt
     4861 gcgctgtgga acacggcttc tgcaaatttg gcgggcttgg cttctttttt gtagcggtcg
     4921 aaacggtagg cggcattgcc gaacgcaatc gcaaacgctt cggcaacggc tgcagcctgc
     4981 gcttcttcaa agacgtgaac gtccacattg accgtttcct gattttgcgc ccatttggcg
     5041 gcttcggcgg cggccttgtt caatgcggcg cggccggtgc ttttcagaca gcatacggca
     5101 acagcctgca aaccgttgcc tgtcgggatt tttgtgtcgg caaaattttg accttcttca
     5161 agcgaagaca aaagggcaag ggcggtcgga tggtttaatt gcgcctcttc ggtgcagaca
     5221 aataactgtg cgcctgcctg ctgttcctgc aagatttcgg tttttgtgct aaattccacg
     5281 tttattctcc tgattgagac ggttgtcggt agttttcgga cggcctttcg ctcaaaagac
     5341 cgtctgaaga cggctggcac gattgtaccc catttgaagc accgtctgaa accttgcgcg
     5401 gacaatccgc ctgcgccgaa ccgcttaccg ccccctgacc gcgattctat gatttatcaa
     5461 agaaacctca tcaaagaact ctcttttacc gccgtcggca ttttcgtcgt cctcttggcg
     5521 gtattggtct ccacgcaggc aatcaacctg ctcggccgtg ccgccgacgg gcgtgtcgcc
     5581 atcgatgccg tgttggcatt ggtcggcttc tgggtcatcg gtatgacgcc gcttttgctg
     5641 gtgttgaccg catttatcag tacgttgacc gtgttgaccc gctactggcg cgacagcgaa
     5701 atgtcggtct ggctatcctg cggattggca ttgaaacaat ggatacgccc ggtgatgcag
     5761 tttgccgtgc cgtttgccgt tttggttgcc gtcatgcagc tttgggtgat accgtgggca
     5821 gagctacgca gccgcgaata cgctgaaatc ctgaagcaga agcaggaatt gtctttggtg
     5881 gaggcaggca agttcaacag tttgggcaag cgcaacggca gggtttattt tgtcgaaacc
     5941 ttcgataccg aatccggcat catgaaaaac ctgttcctgc gcgaacagga caaaaacggc
     6001 ggcgacaaca tcatcttcgc caaagaaggt aacttctcgc tgaacgacaa caaacgcacg
     6061 ctcgaattgc gccacggcta ccgttacagc ggcacgcccg gacgcgccga ctacaatcag
     6121 gtttccttcc aaaaactcaa cctgattatc agcaccacgc ccaaactcat cgaccccgtt
     6181 tcccaccgcc gtaccattcc gaccgcccaa ctgattggca gcagcaaccc gcaacatcag
     6241 gcggaattga tgtggcgcat ctcgctgacc gtcagcgtcc tcctactctg cctgcttgcc
     6301 gtgccgcttt cctatttcaa cccgcgcagc ggacatacct acaatatctt gattgccatc
     6361 ggtttgtttt taatttacca aaacgggctg accctgcttt ttgaagccgt ggaagacggc
     6421 aaaatccatt tttggctcgg actgctgcct atgcacatca tcatgttcgt catcgcaatc
     6481 gtacttctgc gcgtccgcag catgcccagc cagcccttct ggcaggcggt tggcaaaagt
     6541 ctgacattga aaggcggaaa atgaacctga tttcacgtta catcatccgt caaatggcgg
     6601 ttatggcggt ttacgcgctc cttgccttcc tcgctttgta cagctttttt gaaatcctgt
     6661 acgaaaccgg caacctcggc aaaggcagtt acggcatatg ggaaatgctg ggctacaccg
     6721 ccctcaaaat gcccgcccgc gcctacgaac tgatgcccct cgccgtcctt atcggcggac
     6781 tggtctctct cagccagctt gccgccggca gcgaactgac cgtcatcaaa gccagcggca
     6841 tgagcaccaa aaagctgctg ttgattctgt cgcagttcgg ttttattttt gctattgcca
     6901 ccgtcgcgct cggcgaatgg gttgcgccca cactgagcca aaaagccgaa aacatcaaag
     6961 ccgccgccat taacggcaaa atcagcaccg gcaataccgg catttggctc aaagaaaaaa
     7021 acagcattat caatgtgcgc gaaatgttgc ccgaccatac cctgctgggc attaaaatct
     7081 gggcccgcaa cgataaaaac gaactggcag aggcagtgga agccgattcc gccgttttga
     7141 acagcgacgg cagttggcag ttgaaaaaca tccgccgcag cacgcttggc gaagacaaag
     7201 tcgaggtctc tattgcggct gaagaaaact ggccgatttc cgtcaaacgc aacctgatgg
     7261 acgtattgct cgtcaaaccc gaccaaatgt ccgtcggcga actgaccacc tacatccgcc
     7321 acctccaaaa caacagccaa aacacccgaa tctacgccat cgcatggtgg cgcaaattgg
     7381 tttaccccgc cgcagcctgg gtgatggcgc tcgtcgcctt tgcctttacc ccgcaaacca
     7441 cccgccacgg caatatgggc ttaaaactct tcggcggcat ctgtctcgga ttgctgttcc
     7501 accttgccgg acggttcttc gggtttacca gccaactcta cggcatcccg cccttcctcg
     7561 ccggcgcact acctaccata gccttcgcct tgctcgctgt ttggctgata cgcaaacagg
     7621 aaaaacgttg aaccaatgcc gtctgaacct ctcttcagac ggcatttgtt ttcattgaca
     7681 cattcccgca gacagatagc cgttccctat tatagtggat taacaaaaac cagtacggcg
     7741 ttgcctcgcc ttgccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt
     7801 tgttaatcca ctatacatta cctgtcataa cagttccatt tttgttaaaa ctagtctatg
     7861 atagcggtac aaatattgtt tacaatattt aacgcaaatc atttgcaacc cgacaaaaga
     7921 aaaacagaaa aaggaacaaa gagatgttag aagcctatcg taaagccgcc gccgagcgcg
     7981 ccgccctcgg cattcccgcc ctccctttga acgcgcagca aaccgccgat ttggttgagc
     8041 tgctgaaaag cccgcccgca ggcgaaggcg agttcttggt cgaactgctt gcccaccgtg
     8101 ttccgcccgg tgtggacgat gccgccaaag tcaaagcctc attcctggct gccgttgccg
     8161 aaggcagcgc gtccagcccg ctgatctccc ccgaatatgc gaccgaactc ttaggtacga
     8221 tgctcggcgg ttacaatatc cacgccttaa tcgaactctt ggacgacgac aaactcgcgc
     8281 ccattgccgc caaaggcttg aaacatacgc ttctgatgtt cgattccttc cacgacgttc
     8341 aggaaaaagc cgaaaaaggc aacaaatacg cgcaagaagt tttgcaatct tgggcagatg
     8401 ccgaatggtt cgcctcacgc gccaaagttc ccgaaaaaat caccgttacc gttttcaaag
     8461 ttgacggcga aaccaataca gacgacctct cccccgcgcc cgacgcgtgg agtcgtcccg
     8521 atattccgct gcacgcgctg gccatgctga aaaacccgcg cgacggcatc acgcccgaca
     8581 aaccgggcga agtcggtccg attaaattgt tggaagaact caaagccaaa ggtcatccgg
     8641 ttgcttacgt cggcgacgtg gtcggtactg gttcttcacg caaatccgcg accaactccg
     8701 tcatttggca taccggcgaa gacattccgt tcgtgccgaa caaacgcttc ggcggcgtat
     8761 gtttgggcgg caaaatcgcg ccgattttct tcaataccca agaagattcc ggcgcgctgc
     8821 cgattgaagt cgatgtatct gctctaaaaa tgggtgatgt cgtcgatatc ctgccttatg
     8881 aaggcaaaat cgtgaaaaac ggcgagactg ttgccgagtt tgaattgaaa tcacaagtat
     8941 tgctggacga agtgcaagcc ggcggccgta tcaacctgat tatcggccga ggtctgaccg
     9001 ccaaagcgcg cgaagccctg aaactgcctg cctctactgc attccgcctg ccgcaagcgc
     9061 ctgccgaaag caaagccggt ttcaccttgg cgcaaaaaat ggtcggccgc gcctgcggtc
     9121 tgcccgaagg acaaggcgtg cgcccgggta cttactgcga accgcgtatg acgacggtcg
     9181 gctcgcaaga cacgaccggc ccgatgaccc gcgacgagtt gaaagacttg gcttgtttgg
     9241 gcttctccgc cgatatggtg atgcagtctt tctgccacac cgccgcctat ccgaaacctg
     9301 tcgatgtaaa aacccataaa gaactgcccg cctttatttc cacccgtggc ggcgtgtcac
     9361 tgcgtccggg cgacggcgtc atccactcgt ggctcaaccg cctgctgctg cccgataccg
     9421 tcggcaccgg cggcgacagc catacccgtt tccccatcgg tatttccttc cccgccggct
     9481 ccggcttggt tgcctttgcc gccgcaacgg gcgtaatgcc gctcgatatg cccgagtctg
     9541 tattggtacg cttcagcggc aagctgcaac cgggcgtaac cctgcgcgat ttggtgaacg
     9601 ccatcccgct gtacgcaatt aaacaaggtt tgctgaccgt tgccaaagcc ggtaagaaaa
     9661 acatcttctc tggccgcatc ctcgaaatcg aaggcctgcc cgatttgaaa gtggaacaag
     9721 cctttgaatt gaccgacgca tccgccgaac gctccgccgc cggctgtacc gtgaagctca
     9781 ataaagagcc gattatcgag tacatgaaat ccaacgtcgt gttgatgaaa aacatgattg
     9841 ccaacggcta tcaagacccg cgcactttgg aacgccgcat caaagccatg gaaaaatggc
     9901 tggcaaatcc cgagttgctc gaagcggata aagatgccga atacgccgcc gtgattgaaa
     9961 tcaacatgga cgacatcaaa gagccgatta tcgcctgccc gaacgacccg gacgacgtgt
    10021 gcttcatgtc cgaacgctcc ggcaccaaaa tcgacgaagt attcatcggt tcgtgtatga
    10081 ccaacatcgg ccacttccgc gccgcctcca aacttttgga aggcaaggca gacacccccg
    10141 tccgcctgtg gattgcgccg ccgaccaaaa tggacgcgaa acaattgtcc gacgaaggac
    10201 actacggcgt actcggacgt gccggcgcgc gtatggaaat gccgggttgc tccttatgta
    10261 tgggtaatca ggcgcaagta cgcgaaggtg cgaccgttat gtccacctcc acccgcaact
    10321 tcccgaaccg tttgggtaaa aacacctttg tttacctcgg ttcggcggaa ttggcagcga
    10381 tttgctccaa actgggtaaa atcccgaccg ttgaagaata tcaagccaat atcggcatca
    10441 tcaacgaaca gggcgataaa atctaccgct atatgaactt caacgaaatc gacagctaca
    10501 acgaagtagc cgagaccgtg aacgtttaat ccccgtcatc cgtatgaagt aagggattga
    10561 ccgcaatgcc gtctgaacaa ccttcagacg gcattgcaac attccgctaa cccttctttc
    10621 cgcaaacgct gcaaatacgg cgttcacgcc cccacataaa ggaaacgaca gtgaacctga
    10681 aaaaccgcca ttttctgaaa cttttagact tcacgccgga agaaatcacc gcctacctcg
    10741 accttgccgc cgaattgaaa gccgccaaaa aagcagggcg cgagattcag cggatgaaag
    10801 ggaaaaacat cgccctgatt tttgaaaaaa cctctactcg gacgcgctgc gcgtttgaag
    10861 tcgccgcgcg cgatcaaggc gcgggagtga cttatttaga gccgtccgcc agccaaatcg
    10921 ggcataagga aagcatcaaa gacaccgccc gcgtgttggg caggatgtac gatgccatcg
    10981 aatatcgcgg tttcggtcag gaagttgttg aagaattggc gaaatacgcg ggcgtacccg
    11041 tgttcaacgg gctgaccaac gagttccatc ccacacaaat gcttgccgac gcactgacta
    11101 tgcgcgaaca cagcggcaaa cctttgaacc aaaccgcgtt tgcctacgtc ggcgacgcgc
    11161 gttacaacat gggcaattcc ctgctgattt taggggcaaa attggggatg gacgtgcgta
    11221 tcggcgcacc gcaaagcctg tggccgtctg aaggcattat tgccgccgca cacgccgccg
    11281 ccaaagaaac cggcgcaaaa attaccctga ccgaaaacgc gcatgaagcc gtgaagaatg
    11341 ttgattttat tcataccgat gtgtgggtca gcatgggcga gccgaaagaa gtctggcagg
    11401 aacgcatcga tttgctgaaa gattaccgcg ttacgcccga actgatggcg gcatcgggca
    11461 atccgcaagt caaattcatg cactgcctgc ccgccttcca caaccgcgaa accaaagtcg
    11521 gcgaatggat ttacgaaacc ttcgggctga acggtgtgga agttacagaa gaagtattcg
    11581 aaagccccgc cagcatcgtg ttcgatcagg cggaaaaccg tatgcacacg attaaagcgg
    11641 taatggtcgc ggctttgggc gactgacaga actgtgcctg tttaaattca tccgcaacac
    11701 agataccgtc tgaacacgat gttcagacgg tatccatata tagtggatta aatttaaacc
    11761 agtacggcgt tgcctcgcct tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt
    11821 cctgattttt gttaatccac tataaaaaaa ctgcctacac catgtgtagg cagtcccgtt
    11881 tgaaaacaat cagtttttgt cttggtcaac caatttgttg gcagtaatcc aaggcatcat
    11941 ggcacgcagt tgtgcgccga ctttttcaac ttggtggtcg gcattcagac ggcggcgggc
    12001 agtcatagac gcatagttga cattaccctc ttggataaac atttttgcgt attcgccggt
    12061 ttggatgcgt ttcagggcat tgcgcatggc ttctttgctg gaagcattga ccacttcagg
    12121 gccggtaacg tattcgccgt actccgcatt gttggaaatg gagtagttca tattggcaat
    12181 accgccttcg aaaatcaggt caacaatcag tttcatttcg tgcagacatt cgaagtaagc
    12241 catttcaggc gcgtaaccgg cttcggtcag ggtttcaaaa cccgccttga tcaactcgac
    12301 cacgccgccg cacaatacgg cttgttcgcc gaacagatcg gtttcggttt cttcgcggaa
    12361 agtggtttca atcacaccgc ctttggtgcc gccgttggca gccgcataag acagggcgat
    12421 gtctttggct ttgccggaat tgtcttggta aacggcaatc agagaaggca cgccgccgcc
    12481 gcgtttgtat tcactgcgta cggtatggcc cggacctttg ggggcaacca taatcacgtc
    12541 caagtcggca cgcggaacga tttggttgta gtgcacgttg aagccgtgtg caaatgccag
    12601 cgttgcgcct tctttcaaat tggctgtaac ttcggcgtga tagacggcag gcatggtttc
    12661 gtcaggcagc agcagcataa cgacatcggc ttctttggtc gcttcagcaa cggttttgac
    12721 gacatgaccg gctgcttcgg cttttttcca agaagaacct tggcgcagac caatcaccac
    12781 gtttacaccc gaatctttca ggttggcggc atgggcatga ccttgcgaac cgtaaccgat
    12841 gatggcaacg gttttgcctt tgattaggga cagatcggca tctttatcgt aatagacttg
    12901 catttgattt cctttaaggt aaatggttgt cgaagcctta aaatgttgag cggcttcgga
    12961 cgggttaaac agagtgtgcc gcttaatcgg caacttcatt catcaatacg atttccaacg
    13021 cttctgtttt gccgtcgacg gactggacga aggcttggaa atgcgcgctg gcgttatgtt
    13081 cgtcaatagc tgcttgagat ttccaatttt ccacgaaaac aaaacggttc ggtttgccga
    13141 tttcctgatg gagatcgtag ctgatgttgc cctcttctgc acggctggct ttgaccagtt
    13201 ctttaaactg tgctgccagt gtttctgtgt attccggttt gacggtaacc agtgcgacaa
    13261 ttttaatgtt cgacataaat ctctcctgcc gttcgttttt cagacgacat tcaaataccg
    13321 tgccgtctga aaggttacgg cgttaaattt tcaaaatacg ctcaccgcga ccgatgccgg
    13381 ccgcgcctgt gcgtacggtt tccaaaattt gggcgcgtcc gaccgtttcc aaaaaggaat
    13441 ccagcttgtc tgtcgagccg gtaatttcaa tcgtatagct gcggtcggtt acgtcgatga
    13501 tgctgccccg gtagatttcg gtcaagcgta aaaattcgtc gcggtctttg ccggcggcac
    13561 ggacttttac caacatcagt tcgcgttcga caaaacggct ttcgttcaaa tcgaccactt
    13621 taatcacttc aatcaattta ttgagttgct tggtgatttg ttcgatgacc tgctcgtcgc
    13681 cgtgggtaac gatggtcata cgggacaggg ttttgtcttc ggtcggcgca accgccaaag
    13741 aatcgatatt gtaatcgcgt gcagagaaca aaccgaccac gcggctcatc gcacctgatt
    13801 cgttttcaat cagaacagat aagatatgtc gcatttgcct ctccttacgc cttttcgtcc
    13861 gcacgcatat gcggcggaag taccatttcg tccaaacctt tgccgttacc gaccatgggc
    13921 atcacattct gtttctggtc ggtcaggaag tcgataaaca ccagcctgtc tttttggttc
    13981 aatgcttcca acaacgcacc ttccacatca gacttcttgt ccacgcggat gccgatatga
    14041 ccgtatgcct cggcaagttt gacgaaatcg ggcaaagaat cgaaataagt ttccgactct
    14101 cggccgccgt aatatatttc ctgccactgg cgtaccatac cgagataacc gttgttcagc
    14161 gtaatgacgt taaccggaat ccgatattgg aaacaggtgg acaactcttg gatgttcatc
    14221 tgaatcgagc cgtcgccggt aatacagaat acgtcttgat ccggggcggc aagttttgca
    14281 ccaatcgcat aaggcagacc cacgcccatc gtacccaaac cgccggaatt gagccattgg
    14341 cgcggacgtt cgaagggata atattgagcc gcaaacattt gatgctgccc tacatccgat
    14401 gtgatgattg ccgaattgcc ggtaatctcg gcaagcttct gaatcacata ttggggcttg
    14461 ataatttcgc tgccgttgtc aaaccacaag caatctcggg aacgccattc ctctatggtt
    14521 ttccaccatt tgcccaaagt atcttcagac ggcacggact cttgtttttg ccacagcgca
    14581 accatctcgg acaaaacgtt tttcacgtcg ccgacaatcg gaatgtccgc cttcacgcgt
    14641 ttggcgatgc tggaaggatc gacatcgata tggataacct tcttcgcctt ctcgaaaaat
    14701 ttggacggta cggaaaccac acggtcgtca aaacgcgcac ctacggcaag aacgacatcc
    14761 gcattctgca tggcaaggtt tgcctcgtaa gtaccgtgca taccgagcat accgaggaat
    14821 tggcggtcgc tggaaggata agcgcccaag cccatcagcg tacccgtgca cggagcaccc
    14881 gtcattcgga caaatcgggt cagctcttca gaagcattac ccaacaccac gccgccgcca
    14941 aaatagacga ctggacgttt ggcagatgcc aacatctgca cggccttttt aatctgaccg
    15001 atatgccctt gaacaaccgg ttgatacgaa cggataaaaa tgtcttcctg aggatagctg
    15061 aatttcgcca tcgcctgcgt aacatctttc gggacatcaa ccaccacagg ccccggtcgg
    15121 ccgcttgcgg caatttggaa cgccttttta atggtttccg ccaactcatt gatatccgta
    15181 accaggaaat tgtgtttgac gcacggacgg gtaataccca ccgtatcaac ttcttggaac
    15241 gcatccgtac caatcaggga attgcctacc tgcccgctga tgaccaccat cggaatcgaa
    15301 tccgtatagg cagtagcaat accggtcagt gcattggtaa cgcccgggcc ggatgtaacc
    15361 aatgccacgc ccaccttacc gctgacgcgc gcatacgcat ctgccgcgtg tactgccgcc
    15421 tgctcgtgac gggtcagaat gtgcttgaat ttattgagtt ggaaaagggc atcgtagatt
    15481 tcgataaccg caccgccggg ataaccgaaa acgtactcga caccttcggc tttgagactc
    15541 tgcactatga tttgcgcgcc tgatagctgc ataacgacct cttttatacg gtttcaaacc
    15601 aatagggaca aaccgctttg ccacagcacc tgtaatgcaa ttccaccaag cagcgattta
    15661 gggtacgcgc attgggggaa cacggcaaca gacggattat ccaatcaatt ggaaaggaac
    15721 acagagtttg tgaaaaagag tggaaacgat aacgcaaacc gacagttcaa tcaagaaaaa
    15781 tctttcatct tttaatattt tttgaaagca gagaaattat tgattgattt taaaagaata
    15841 aaatcaggag tacctttttt gaaagatgga aattgttgac agtttgtgta ggaggggcag
    15901 atgtgaaaaa cccttcttcg atatcaagaa ttgtaaaatt tacagggttt catcccaata
    15961 aagactcggg atattgattg aacttgattt catttttgat atatcaaaaa tattcccaac
    16021 catacttcct gaaaatggct cattgcaccg gactgtattg gacggcattg acagaaccaa
    16081 gagggctaac aacgacttaa tatattgatt gtatagtgga ttaacaaaaa tcaggacaag
    16141 gcga
//
LOCUS       DAWGBY010000037        15886 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.037, whole genome shotgun sequence.
ACCESSION   DAWGBY010000037 DAWGBY010000000
VERSION     DAWGBY010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.037"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(26..652)
                     /locus_tag="WHG62_001001"
     CDS             complement(26..652)
                     /locus_tag="WHG62_001001"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ1725127.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFHRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
     gene            complement(711..1202)
                     /gene="greB"
                     /locus_tag="WHG62_001002"
     CDS             complement(711..1202)
                     /gene="greB"
                     /locus_tag="WHG62_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ1725128.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            complement(1302..2846)
                     /gene="purF"
                     /locus_tag="WHG62_001003"
     CDS             complement(1302..2846)
                     /gene="purF"
                     /locus_tag="WHG62_001003"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ1725129.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLKKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            complement(3159..3656)
                     /locus_tag="WHG62_001004"
     CDS             complement(3159..3656)
                     /locus_tag="WHG62_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ1725130.1"
                     /translation="MNNLPVADLLVSAIIAACIVLSAMRGVIAEAGSMAAWVVAFFFA
                     KLFAAPFADIAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            complement(3649..4647)
                     /gene="ftsN"
                     /locus_tag="WHG62_001005"
     CDS             complement(3649..4647)
                     /gene="ftsN"
                     /locus_tag="WHG62_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ1725131.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATANSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTRPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            complement(4660..5934)
                     /gene="folC"
                     /locus_tag="WHG62_001006"
     CDS             complement(4660..5934)
                     /gene="folC"
                     /locus_tag="WHG62_001006"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ1725132.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTITASFER
                     IEAARGEISLTYFEFNALAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRGGKPAICGQNPAPASLLSHAEAIGAKLLMVQRDF
                     EFHALENIQWNYRFRPQHSDSPARNRNSLPFPALRGAYQLSNAACALTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            complement(5966..6412)
                     /locus_tag="WHG62_001007"
     CDS             complement(5966..6412)
                     /locus_tag="WHG62_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ1725133.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAAALSGSSMVTPYALF
                     LQWDTGGKTVRHCITHDMADPESYRRLKVWVLWRQPKKTAETDTPS"
     gene            complement(6417..6776)
                     /locus_tag="WHG62_001008"
     CDS             complement(6417..6776)
                     /locus_tag="WHG62_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725134.1"
                     /translation="MYFVDRTAVVLKPTARFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDINKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            complement(6849..7577)
                     /locus_tag="WHG62_001009"
     CDS             complement(6849..7577)
                     /locus_tag="WHG62_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725135.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            complement(7750..8529)
                     /gene="rsmA"
                     /locus_tag="WHG62_001010"
     CDS             complement(7750..8529)
                     /gene="rsmA"
                     /locus_tag="WHG62_001010"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ1725136.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDM
                     ELLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVDINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            8726..9415
                     /locus_tag="WHG62_001011"
     CDS             8726..9415
                     /locus_tag="WHG62_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ1725137.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLRERGIASCPTVLKAAREHGNASDKFLKVVETVDLVAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAF
                     FEMAGLCEKQL"
     gene            9600..10802
                     /gene="trpB"
                     /locus_tag="WHG62_001012"
     CDS             9600..10802
                     /gene="trpB"
                     /locus_tag="WHG62_001012"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ1725138.1"
                     /translation="MKNYHAPDEKGVFGEHGGLYVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTAAK
                     DEEALEAFDLLCKYEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(10980..15643)
                     /gene="iga"
                     /locus_tag="WHG62_001013"
                     /pseudo
     CDS             complement(10980..15643)
                     /gene="iga"
                     /locus_tag="WHG62_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244904.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
BASE COUNT         3302 a         3868 c         4305 g         4411 t
ORIGIN      
        1 cattccggcg gcaatttttg ttgctttaac gggataggcg gttggcggtt gcgataaagg
       61 cggcgacttt ggctgggtct tttttgcctt tagacgcttc cacgccgccg gatacatcga
      121 ccgcttccgc tccggtgatg cggacggctt cgccgacgtt ttcaggggtc agcccgccgg
      181 caagtaccca cggtttgccc gaatattccg ccagcagcgt ccagtcgaag cggtgtccgg
      241 tgccgccgta ttccgaagga tggtaggcat cgaaaagcag tgcctgagcg tcggggaagc
      301 ggtcggcggc gtttcggatg tctgatgtcg tctgaacacg aatggccttg atataggggc
      361 ggtggaactg acggcagaat gtgtcgtctt cgtcgccgtg gaattggatg atgtgtatcg
      421 gcacttcggc aaggatgcgg cggatgtttt gcgcgctttc gttgacgaaa agggcgacaa
      481 cgctgacaaa cggcggcagt gcggcggtga tttttttggc gcgggcaata tcgacggccc
      541 ggctgctgcc ttggaaaaag accagcccga cggcatctgc acctgccgct acggcggccg
      601 atgcgtcttc cggtgtggtg atgccgcaga ttttggtgcg gattttcctc attcggtatt
      661 cctttatttg ggaaacggcg cgcttgcacc gtttcagacg gcattcccga tcagtcgatt
      721 ttgatgtatt cgacagaaag gatttcaatt tcctcacgcc cttccggcgt gttcaaaacc
      781 acttcgtcgc cttcgcgcgc tttaatcagg caacgcgcca acggcgaaat ccaagaaatt
      841 ttgttttgcg cggtatcgat ttcatcgatg ccgacgattt tgacggtttg ctcgcgcccg
      901 tcgccgcgca acaggccgac ggtcgcgccg aaaaatactt ggtcggtcgc ttcgcgcaat
      961 tcgggatcga cgacgacggc ggactccaaa cgcttggtca ggaaacggat gcggcggtcg
     1021 atttcgcgca tacggcgttt gccgtaaaga tagtcgccgt tttcgctgcg gtcgccgttg
     1081 cctgccgccc agttgacgat ttggacgatt tcggggcgtt ctttgttgac cagttgataa
     1141 agctcgtctt tcaatgcctg ccatccggcg ggcgtaatgt agtttttggt ttcggtactc
     1201 atattgtgtg cggatgaaac gggaaatgtg atgccgatat gggaaatgcc gtctgaaaac
     1261 ccggcgttcg gatttcagac ggcatcgcgg tttgggaagc cttattcttc gtcgcccgca
     1321 tcgctgatgc tgatgctgtg ttccatcctg ctcgggtgga ttttcagacc gccgcagccg
     1381 gatttctcgg cagacaggcg gtcgaggtag gcatcatcga tgtcgccggt ctgataaatg
     1441 ccgttgaaac aggacgaatc gaaggattcg attttcgggt tgagtgcttt gacgacggct
     1501 tccaaatcgc ccaagtcttg aaacacgatg ccgtccgcgc cgatttcggc ggcgatttcc
     1561 gccgcgctgc gcccattggc aatcaactct tcgcgcgtgg gcatatcgat gccgtatacg
     1621 ttgggatagc gcacttcggg cgcggcggag gcgatataga ctttgcgcgc gccagccgcg
     1681 cgtaccattt cgacgatttc acggctggtc gtaccgcgca cgatggagtc gtccaccagc
     1741 aacacgcttt tgcctgcaaa ttcggtttcc atcgggctga gtttttggcg cacggatttt
     1801 ttgcgcgtcg cctggccggg cataataaag gtgcggccga tatagcggtt tttaatcaaa
     1861 ccttcgcggt aaggcttttt gaggtggaca gcaagctcca tcgcgctggg gcggctggtg
     1921 tcggggatgg gcatcacgac atcgatgccg tccacgggca gctcgcgttt gattttttcc
     1981 gccagcgaca cgcccatatc caagcgcgat tggtaaacgg atacgccgtc aatcacagag
     2041 tcggggcggg caaaataaac atattcaaaa aggcaggggc tgagtttggc acggtcgctg
     2101 cattggcggg caatcattgt gccgtcaaag ccgacaaata ccgcttcgcc cggccggatg
     2161 tcgcgttcca aatcgtaggt aagcgcgttg aaggcgacgg attcggaggc gacggcatag
     2221 gattttctgc cttcgctgtc ggtttgcgaa cccaatacca gcgggcggat gccgtaaggg
     2281 tcgcggaagg cgagcatacc gtagcccgca atcatggcaa tcacaccgta tgcgccgcgc
     2341 accaggcggt ggacttgggc aacggcgttg aaaatattgt cggcattgag ccggtgcggg
     2401 tcggcgtttt tagagacttc gcggcgtaat tcgtgcgcga atacgttgag caagacttcg
     2461 gaatcggagc tggtgttgac gtggcgcagg tgtttgttac acacgttttc atacagttcg
     2521 gcagtgttgg tgaggttgcc gttgtgcgcc aaaacgatgc cgaacggcga gctgacgtag
     2581 aaaggctgcg cctccgcgct gctgcctgcg ttgcccgcag taggataacg gacgtgggcg
     2641 atgccggcgt tgccggtcaa atcgcgcata ttgcgtgtgc ggaacacttc gcgcaccatg
     2701 cctttgcctt tgtgcatatg gaaggtaccg ccttccgccg ttgcaatgcc cgccgcatcc
     2761 tgccccctgt gctgcaacat ctgcaagccg tcgtacagaa gctggttcac gggttcatga
     2821 ctgaccaaac ctaatacgcc gcacatatcg tcttctccga ttcgaggttt aagggtaaaa
     2881 cggaattata aagtaaacgg tggttttttg cctgaattgt tgacaatatt tgagcgaagg
     2941 acagataggt gggtttatgg agaataagat ttatagtgga ttaaatttaa atcaggacaa
     3001 ggcgacgaag ccgcagacag tacaaatagt acggcaaggc gaggcaacgc cgtactggtt
     3061 taaatttaat ccactataat ctgtgatatg gctgaggaaa ggaaaaaaca tttcagacgg
     3121 cataaaagag aatgccgtct gaaatatccg tatggcaatc aatcgtcttc cggagtttcc
     3181 gccgtgccgc cgctatggtt caacacggct tcggaaagcg atacgaaaaa cggcagtgtg
     3241 taagattgcc gccattcttc ggtatcgggc aggtcggttt ttgaagcgag catgaccagc
     3301 agggtaataa tcaaaatgcc tttcaatgca ccgaatacgc cgcccaaaat gcggttggca
     3361 aagcccaaac cgaccgccga aactgccccg gtcagcagcg agcggagtat tttctggatc
     3421 agacaggcaa tgacgaatag ggaaatgaac gacagagcca atgcaaacag gcggggttgg
     3481 aacgatgcaa aggcgatgtc ggcgaagggt gcggcaaaga gtttggcgaa aaaaaaggca
     3541 accacccatg ccgccattga gccagcctcc gcaatcacgc cgcgcatcgc ggatagcacg
     3601 atgcaggcgg cgatgatggc ggagacgagg aggtcggcaa cggggaggtt attcattcgt
     3661 tacctgaccg gcgataccgt gtacgcgcaa tttgttcaaa tcgcgttcgg catcccttgc
     3721 gtttttatag ttgcttgatt tgacgcggta aactttgccg ttgtcggtca taatttcggt
     3781 gatggtcgaa tcgatacccg ccgccttcat tttgcgctgg aggcttaagg cgcgttcttt
     3841 ttcggcataa cctgcctgaa tggcggcttt tttaccggat ttttccttct cggcggtttt
     3901 ggtcttgtcc gctttgtcgg ttttttgtgc cgtttcgtgt tttttgccgt ccgaacggtc
     3961 tttttcggct gtttttttgc tttcagcctt gtcggctttt ttcgcttctt ttaccgcgct
     4021 gtcggatttt gccgtatccg gtctggtttt ttcggcggca gttttcggtt tgtcggcaac
     4081 tttttcggcg gttttggttt ctttggcttt gggcttggct ttggcagtgc gttccgcttt
     4141 ttgcggtttt gtttcggcag tgcgtttcgg tttttcaacc gctaccgtat ccgtactgtt
     4201 ggcagttgcc ggcacttttt cggcagcgcg ttgttttgcc tgcttcggtg cggttttggc
     4261 ggtttctgcc tgttgcagtt tctcggatgc ttccaaacct ttgatgttgc tgtcttcgag
     4321 gcggtcgtta atcagcacca gcggcgcgcc tacgttttca ggctcgctga tttcgctgtc
     4381 ggcggcagaa ggcttgtctt cgcctgccaa gtcctgcggt ttgtcggcgg cggatttcaa
     4441 ggcaggggtt tgtgccgcac ctgccgcttt gttttctacg ccgcttgttt cgccggcagt
     4501 ctgttcggca gggccggaac tgagggcggc tgccagcagg atgcaggagg cggcaaccag
     4561 gcaacttgcc gttacgaggc ggcggcggtt gcgccgtttg agttgttcgt aaccgctcag
     4621 gacttcgttt tgtttgtttt cggacataga agtttccttt taaagtaccg acatgacatc
     4681 ggcaacggta tgaaatgagc cgaaaacgac gattctgtcg ttctcgcccg cttttgaggc
     4741 tgccgcccgg tatgcttcgc ggacggcggc gaatgtctgt atgttttcga tgctgtgttc
     4801 gtgcagtttg ttttgcaggc tctcgagcgt catgccgcgc ggtacatcca acggtgcgat
     4861 ataccactcg tcaaactggt ctttaacgat ttccaacacg ccgtctatgt ctttgtcgga
     4921 cagcatactg aatacggcgg tgcgtttttg cgcaaacgcc aaattaatca ggctgcggcg
     4981 cagggcgcgg gcagcgtggg gattgtgtcc gacgtccaaa acggtcagcg gccggccggg
     5041 caggacttgg aagcgtccgg gattttcaac cagcagcaat ccgcgtttga ttgcaccgat
     5101 gtccaccggc aatttgtcgt tcaaacattc caacacggtc agcgcgcagg cggcattgga
     5161 aagttggtat gcgccgcgca atgcggggaa gggcagggaa ttacggttgc gagcggggct
     5221 gtctgaatgc tgcggtcgga agcggtagtt ccattggatg ttttccagcg cgtgaaactc
     5281 gaaatcgcgc tgcaccatca gcagtttcgc gcctatggct tcggcgtgtg aaagcaacga
     5341 tgcgggcgcg ggattttgac cgcagattgc gggtttgccg ccgcggaaca cgcctgcttt
     5401 ttcaaagccg acctgctcga ccgtatcgcc caaaaatgcc tgatggtcca aatccacgct
     5461 ggtaaccacc gcgcaatcgc cgtcaaacgc gttgaccgcg tccaagcgtc cgcccaagcc
     5521 gacttccaat atcatcacgt caacctgttc gcgcatgaag atgtcgaccg ccgccaaggc
     5581 attgaattca aaataagtca gcgatatttc tccgcgcgcg gcttcgatgc gttcgaagga
     5641 agcggtgatt gtgtcgtctg aaaccggctc ggcgttgatg gcgatgcgtt cgttgtaacg
     5701 caataaatgc gggctggtca gtgtgccggt tttgtagccc gcctgtttgt aaatctgtgt
     5761 caggtaggcg cagaccgaac ctttgccgtt tgttcccgcg acaacgacga cggggcattg
     5821 cggcgtgagc ttcatccgtt ttttcacttc gcctacgcgt tccaagccca tatcgatcaa
     5881 gccaccgctg tgggcggttt ccaaatggga gagccagtct tgcagtgttt tcattgagtg
     5941 ttccgtgttc aaatgccgtc tgaaatcagc ttggtgtatc ggtttcggcg gtttttttcg
     6001 gctgccgcca aagcacccag actttcagcc gccggtagga ttccgggtcc gccatatcgt
     6061 gggtgatgca gtggcggacg gttttgccgc cggtgtccca ttgtaagaat aaggcataag
     6121 gcgtaaccat actgctgccc gacagtgccg ccgcctttgc cgttttttct ttgccggata
     6181 cgatttccgc ctgtccgtcg cggtctatgg taatggcggt tatggcatgg cggtgtttca
     6241 gattcgttat cctgagcgag tatgcgtaac ttgccgccaa agccgccaaa ccgaaccaca
     6301 tcatccggcc gtaaaaccag gtcaggcaga cggcaaggga agccgagtgg agcgatacgg
     6361 tcaggatgtt caggatgcgg gacggcctca atgccgtctg aaaggcgcgc acagccttac
     6421 atcatgttgt cgaacacggg ggtaatgttc aattccgctt cttccatgtc caacaccata
     6481 tcgtggattt cgatgtcgaa aaattcccaa aacgccttca gccccatatc ttgcggccat
     6541 ttatccttat tgatgtccca acctgccagc tccgcctcga aaatctggcg gtagcgttcg
     6601 tcgaagtagg aaacgacggc ttccggttcg tcgaactgcg gaacgaggaa gacggaacag
     6661 ttggcacgaa gctgctctat ggtcaggtcg ggcatatttt cgtcggtgct tttgagccat
     6721 tccaaaaagc gcgcggtcgg cttgaggacg acggcggtgc ggtcaacaaa atacatggtt
     6781 ttctttctca atcatcttgc ggtgtcggga tatgctgtct gaacgttcgg ttttcagacg
     6841 gcatagcatc aatgggtcat gacctgttgc aggaactgct tggcgcgttc gtgtttcggg
     6901 ttggtaaaaa acgcttcggg cgtttcgtct tcgaggattt gccctttatc gacgaaaatc
     6961 acgcggtcgg caacttcgcg ggcaaaaccc atttcgtggg ttacgcacat catcgtcata
     7021 ccgctttccg ccaagtcttt catcactttc aacacttcgc cgaccatttc ggggtcgagt
     7081 gcggaggtcg gttcgtcaaa caacattacg cgcggttcca tcgccaaacc gcgtgcaatc
     7141 gccacgcgtt gctgctggcc gccggaaagt tgggaaggga aggcgtcttt tttgtgtgcc
     7201 agtccgacgc gttccaaaag ttccatcgct tttttctctg cctgttccgc attttgacct
     7261 ttaaccttca tcggtgcgag ggtaatgttt tccaacacgg tcaggtgcgg gtagaggttg
     7321 aaactttgaa acacaaagcc gacttcttcg cggattttgt tcaaatcggt ttttgggtcg
     7381 gcaacgttga caccgtccac ccaaatctcg ccgctttcga tgctttcaag ctggttgacg
     7441 gtgcggatga gtgtggattt gccgctgccc gaaggtccgc agacgacgac cacttcgcct
     7501 tttttgattt ccaagttcac gccgttgatg acgtgcaggt ctttgaaatg tttgtgtacg
     7561 tttttgaatt tgatcatgtc ttttctttca gacggcattt gccgttgcag gttgtcgtta
     7621 cgggagctcc atatgatgaa gcgtgtagcg tctgccgtca aaaaaacggt cgttcggatt
     7681 ggtcaggcag gctgcaagcg gcagtatcag gggtaaaagc aggtatttcg tcatcggctt
     7741 actccctttt cagacggcct tgcccgctag ataattgctc aacgccacat atttctccgg
     7801 cgcgatatgt tcggcacggt cttgcggatt gatgtcgact gcctgcaaat catcgtcgcc
     7861 tgcaagctct ttcaggttgt tgcgtatggt tttgcgccgc tggtggaagg cgagtttcac
     7921 cagtttggcg aaatgctcga aatcgtccgc cttgccgatg cggtgtttca ccggaatcat
     7981 acggacgacg gcggaatcca ctttcggcgc ggggtcgaac gattcgggcg gcacgtcaat
     8041 cagcagctcc atatcgaaga aatattgcaa catcacgccc aagcggccgt agtcgttgct
     8101 tttcggcgcg gcaaccatac gatcgaccac ttctttttgc agcataaagt gcatatcgac
     8161 gacatcgtcc gccacctccg ccagcttgaa caaaagcggc gtggaaatgt tgtagggcag
     8221 gttgccgacg attttctttt tgcctgcgat gccgttgaaa tcaaactgca atacatcgcc
     8281 ttcgtgaatc accagtttat ccgcaaacgg cagcgttttc agacggcata cgatgtcgcg
     8341 gtcgatttcg acaacgtgca ggcggttcag ctttttcgcc aaaggttcgg taatcgccgc
     8401 caaacccggg ccgatttcaa tcacgacatc atccgcctgc gggcgcacgg cgttgacaat
     8461 atcgctgata atccgcgtgt cctgcaaaaa attctgcccg aaacgcttgc gggctttgtg
     8521 ttctttcatc gtgtttcctt ttcggttgaa accccgccct ttagggcggt agaatcagac
     8581 tctatttggg aggggcgtaa ccccttccaa atcaggatgg cacatagggc ggtgctttaa
     8641 gtgtcgtcct gtgtgttgga acataaatgt gtttacagta tccgtttgat gtcggcattg
     8701 taaccgaaaa cggcagggcg tgataatgct gtttgaaggc ttgccgtgtt tggcggtttg
     8761 gtgcaaaaac cggctgtctg ccgttttgcc tgttggagga ttgaacgtgt ctgaaaatct
     8821 gcttgaaatc gaaacccatc ccttcgattc cgtgttgccg ccgaaggctg cggtcatgat
     8881 gatggggacg tttccgccca aggaagacaa acgcgcgatg cagtttcatt atccgaattt
     8941 ccaaaacgat atgtggcgcg tttacgggct ggtgtttttt aatgatgcgg cgcatttcca
     9001 aaggttgtct gaaaaagcgt ttgatgccga gaaaatcaag gcgtttttgc gcgaacgggg
     9061 aattgcgtcc tgtccgaccg tgttgaaggc ggcaagggaa cacggcaatg cgtccgacaa
     9121 gtttttaaag gtagttgaaa ccgtcgattt ggtggcggtg ttggcaaaaa tacccgagtg
     9181 ccgccatatt tgtacgacag gcggcaaggc gacggaaatc ctgctcgata ttcagggtgg
     9241 cggcatcaaa atgccgaaaa cgggcgaaac cgtgccgttt ccgtttgccg gacgggattt
     9301 gacgctgacg cgcctgcctt cgacttcgcg tgcctatcct ttgagtttgg cgaaaaaagc
     9361 ggcggcgtat cgggcgtttt ttgaaatggc gggcttgtgt gaaaagcagt tataattgcc
     9421 gacaatttcc cgttcggacg gcatgtttga aaaatatagt ggattaacaa aaatcaggac
     9481 aaggcggcga agccgcagac agtacaaata gtacggcaag gcggggcaac gccgtaccgg
     9541 tttttgttaa tccactataa attgccgtct gaaaatttga agcacaagga cgaaatctga
     9601 tgaagaatta ccacgcaccc gacgagaagg gcgttttcgg cgaacacggt gggctttatg
     9661 tttccgagac cctgattccc gccttgcaag agctggcgga tgcctataag gcagcgaaaa
     9721 acgacccgtc gttttgggaa gaattccacc gcgatttgaa acactacgtc ggcaggccca
     9781 gccccgttta ccatgccgcg cgattgtccg agcatttggg tggcgcgcaa atttggttga
     9841 agcgcgaaga cttgaaccac accggcgcgc acaaagtcaa caacaccatc ggtcaggcac
     9901 tgttggcaaa acgtatgggt aaaaaacgcg tcatcgccga aaccggcgcg ggtcagcacg
     9961 gcgtggcgag tgccactgtt gccgcccgct tcggcatgac ttgcgacgtg tacatgggtg
    10021 cggacgacat ccaacgccaa atgcccaacg tgttccgtat gaaattattg ggcgcgaatg
    10081 tcgtcggcgt tgacagcggc agccgtactt tgaaagacgc gatgaacgaa gccatgcgcg
    10141 aatgggtcgc ccgcgtggat gacacattct acatcatcgg taccgccgcc ggtcccgcgc
    10201 cgtatcccga aatggtgcgc gactttcaat gcgtgatcgg caatgaagcc aaagaacaaa
    10261 tgttggaagc catcggcaga cagcccgacg ttgccgttgc ctgcgtgggc ggcggatcga
    10321 acgccatcgg tttgttccac ccgtatatcg gcgaagaaaa cgtgcgcctc gtcggcgtgg
    10381 aggctggcgg tttgggcgtg aacacccccg atcacgccgc gccgattact tcgggcgcac
    10441 cgattggcgt attgcacggt ttccgcagct atctgatgca ggacgaaaac ggtcaggttt
    10501 tgggtacgca ctctgtttcc gcaggcttgg attaccccgg catcggcccg gaacacagcc
    10561 atctgcacga catcaagcgc gtcgaataca ccgccgccaa agacgaagaa gcactcgaag
    10621 cctttgattt gttgtgcaaa tatgagggca tcatccccgc gctcgaatcc agccacgccg
    10681 ttgcttgggc ggtgaaaaat gcgccgaaaa tgggtaaaga ccaagtgatt ctggtcaacc
    10741 tctcaggtcg tggcgacaaa gacatcaata ccgtcgcgaa gctcaaaggg attaaactgt
    10801 aacctcgtcc gtctgatata gtggattaac aaaaaccagt acggcgttgc ctcgccttgc
    10861 cgtctatctg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
    10921 aaaatgccgt ctgaagcctg agttcagacg gcattttatt ttgctatgaa tttagtattt
    10981 tagaaacgaa tctgtatttt aatttgtccg gatttttgtt tttccaattg ttttcctttt
    11041 gtaatactgc catttacgtt taatgtaaca ttacggtaca gtaacgcggc acctgctgaa
    11101 tattgctgtt gattatctgc tttatagacg aaggaattac cgcccacatt cacgccgcct
    11161 ttgccataat tggcaaagta agctgcagat aacaagggtt ttacggtaag gttgccgact
    11221 ttaaaccgat aagcaaaatc cagtccggcc gtcagtgttt tcactgacat agaacttact
    11281 ttaacactgt cgttacccaa cttgtaatct gcagatgaca ggcggctgta acggatcccc
    11341 gcactgggga caatctcgaa ttgattgatt ttcagcgtat tgcccaaagt aaggccggtt
    11401 tggatgcttg ctcggttaaa gtttgctttt tgctgcgttt gtaaccggct tctcaagctg
    11461 cctgcaccaa tatcgccggc cacataccaa gcatcattta aataatactt accataaagg
    11521 ttggcttgca caaaagtatt tttgccgctc gcctgatcaa aagtatgctg actgtcagag
    11581 taagtcaata cgccgcctat ctgcatattt tcggacaagc tgcggtcaat gccgatttgt
    11641 gtttgcgtgc gtttcgaact aaaccggcga tattgtgcgg aagcataatc acggccataa
    11701 ccgatgttcg acatccaaac gctgtttttt tcggcatcag cacgtgattt ttgtgcaatg
    11761 tgccgtgtta atgaagcacc tgtatccaac aagatagatt gcgtgcttgc cattgcgtca
    11821 gataaagccg agttggtatt ggtgctgact gcatcggctt gcgcgacggc ttgggcttgc
    11881 ggctgcgcgg cggcttgggc tcgcggctga gcggctcttg gttgcaaact cactgtctca
    11941 actttttcat gaagttccgt attgtcttga ggctgtttgt ctgatgtgtc aaccgattcg
    12001 gatacatctt catcttccaa cgcatccaag gggatttctt cataatcgct ggcatcagga
    12061 tttgaatttc tcgctatcct aggcaaagct cgggttgttg catcagatga cagttccggt
    12121 ggtatagctc tgcggttacg acgtttgggt tgagattgtg ctgcttggcg accttcttct
    12181 tccgcctttt gcttggcaag ttcggcggct tcacgttcgg cttccgcttt ttgctcggca
    12241 atttctgctg ctttgcgttc agtttccgct ttttgcttag cagccaactc tgcagctttt
    12301 cgtgcttctt cttgttggcg tgcaagttcg gcagcttggc gttttgcttc ttcggcagct
    12361 gctttttgct cggcaatttc agcggctcgg cgtttcgctt cttcggcttc tgctttttgt
    12421 ttggcaattt cggcagcttg gcgttcggct tccaatcgtt ggcgttcttg ctctgcttgt
    12481 tggcgggcaa gggcatcttg ctgacgtttc gcttcttcag ccttttgatg tgcgactttt
    12541 tctgcctctg cttgctgacg cttcacttgc tccgcttttg cttgttggcg ttttgcttct
    12601 tcggcttgat ttgcctgcgg gctaggcggt gcgacgacga tattttgagg cttggcaatt
    12661 tgtgcaccgt ccgtttgtgt tgccttttgt gcttgagaag ccgtgtttgt ggcaggagac
    12721 ggggccggtt tgactcggcg gcggttctcg gcataaggat tgtacaatcg ggtaataccg
    12781 ttttctgttt tgattgtata acgcaatgcg cctaaatcta catggttatt cgccaaggaa
    12841 acagaaaggt gcgaacggtc ttgtacggat gatgcatcaa agagattcag cccttcctga
    12901 ttgggttcgc ctgttttatc ttgaacatgg agctgataat gaccggatgc ggattccttc
    12961 acaagcactt tatccccaag atttttcgcc aggtgcgtca gataatgaaa atgcccgtta
    13021 ccggataaat gattgatttt gagcgtgtgg tatttatttg cactttgcgc atcggaagcg
    13081 ttgttcaaat gaatatggct atccgccaat gacagattgt gtacttggct gtcgccggtc
    13141 aaatgccatt tgctatgttg atttaggctg acgctgctgt ttccttgccc ttgaatttgc
    13201 ccccataatg cagccttgcc taagaccaat gccgcattct gattcaaatt cacattgccg
    13261 ttaatctgtg tcgcatcaaa gctgtttaaa gccttatcgg ataagttgtc tgtgttgcag
    13321 gtaacgtaac cggtatagtc cgagcgcacg caaacttcat cgccgttttt gtaacccaaa
    13381 tttactttgg cgttgtctgt tgcggtgatg ttggcggtga tgttggatac atttctaccg
    13441 gaagagaatg atgcggattg attaaccgca atttctgtgg ctttgaatgt gcggtttatc
    13501 cagtcgtctt caaatacgac ttcattgttt ttggagaaat gtgcgtcttt tcgggctgaa
    13561 gatttgttca caaaatctct tgcgtgtggt gttggacgac ctgataacaa gacattgcct
    13621 tgagttacgc ttatttttcc gtttaaatta gtgccgcctg ttaacaagaa acggttttgc
    13681 gcgcttttgc cgttgaaatt aaggtttaat gcaccgttat gtccttttcc gttttcttcg
    13741 ccaaagaaac cgctaaaacc gctaatacgc tgattgtttt tgtggttcat cgcgtttttc
    13801 ttggcttctt cttgtgtgct gcccattaaa atccagtcgt tattttccgt ttgtccgttt
    13861 tcgggcatcg gtgcgttcac gctgccgccg gattttaggg cgtaataacg gtagtttttg
    13921 aaataaagat ctttgccttg tggaatcggt ttcctagggc ggtaatagta ataaccatca
    13981 tcgtcatcat cattattttg aatataatga atagagatgg ttttgggatc ggtaatcaaa
    14041 gatttacccg ttagcgtgat tgtggaggcg tggcttgtgt tgtggttgac aatgcgcgcg
    14101 ccttcatcca cgttgcggat gtgttcaaaa gtcaagtcat tgccattggc atccaaacga
    14161 ccgccacgga aaccgaaata taagttatcg ggattaatct gatttgaact atttaatacc
    14221 aatgtaccgc gtccgctcac aatgccgact tgggagaaag cctggacttt tttgtcggca
    14281 tcggcttgtt gattcagaat aaccgtaccg tcgccgactt ttaattgccc ttggttaacg
    14341 cctgtgccgt ttatttctaa tgtgcctttg ccgatttttg ccaatctgtc gccattcgga
    14401 tttttgactt gccaaacgac ttttttgccg tcggcaacat caatccccgc acctagccaa
    14461 gtgatgtcat tatttgcacc tttgactgtg taatcgcctt tgaaaaacag accgcccgcg
    14521 ccttggttga tgttttgatc caataccaaa gtgccgttgt cttcaaaggt aacattctgt
    14581 ccgttgtttg catccctttc attgttggca agccttaccg ctgtcgaacc gatatggctg
    14641 tttgtgcccg tggttttcca atgatgttcg ccataacctt tgatggtgcc ggcgttatcg
    14701 cgttgtttga ttttatctgc aaattctttt tatagatatt ccattcttgc caagagtttt
    14761 tttgatagcc tgcccaataa tcgtaagcac ctaaaaagac ccagcgtttt tcttgtttat
    14821 cataagcaaa taatggtgaa ccgctatcgc ctaacacagc atagttagtc aatgcgtttt
    14881 gagataaaac ttctttgagt ttttctgggg aatgatgttt tgaattatca ccgaagccaa
    14941 tcaagccttc ttgatttaga ttcgatgtga cattcacgtc ttgataaggc gtacctgcaa
    15001 tggcataacg ataagctcgt gaaagctctg tcatattgta gcggctgtta tattcaaatt
    15061 gcgtacctgc tccaactcgc acaaactcag aaaaacggtt tttatcttta taggtttcaa
    15121 cgccgccgcc tgcactggtt ggtgcaatag gtgcgacttc tgttacgaat ttattaaggc
    15181 gtgccatgtt gtagtcttca agacgacctt gattaccgtg atgccaattt ttatttggtt
    15241 cgtagtcatt ttgtgcaact gaacgatatt cgttttcatc attgctaaca tctaagtgcc
    15301 cattgtgatg cccgtaataa gagatttcgt ctccttttac atgtttgacg ctgacggcat
    15361 actggggatc gatgacggtt aatgtacgtc tgttgacatc tgcaacgcta aaatcaatca
    15421 tcggtacgtt ggataatgcg ttgccgatgt tttgaccttg tttgtttttc actgataaat
    15481 cggttgcgcc gacaaaaaat ttgcctttgt tttctgcaaa gtcacggaat atttgataat
    15541 cgacatcgtc tctgaccaat gccgcttctg agtatggtgt aagggcatag gcaagaaaga
    15601 tggataagga tatggcgtta attttaaaac gtttggtttt cataaggttt taccgtttta
    15661 agggtgataa tgttttgtat tttacgccgg tttggcggtg ttgactattt tttgttgtgt
    15721 gaattattca ttttggtgtt ttattgccaa tttaaaaaaa gaatcccgat gtttttattt
    15781 ccgcttcctt tgttctgtta ttcaggcgaa ggtgggaagc cgattttcgg ggttcggttc
    15841 ttctgttaaa tttctgcggc tttttgtttt tggattcccg cttgtg
//
LOCUS       DAWGBY010000038        14590 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.038, whole genome shotgun sequence.
ACCESSION   DAWGBY010000038 DAWGBY010000000
VERSION     DAWGBY010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14590
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.038"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(77..361)
                     /locus_tag="WHG62_001014"
     CDS             complement(77..361)
                     /locus_tag="WHG62_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ1725139.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMLVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII"
     gene            complement(927..2192)
                     /gene="ftsY"
                     /locus_tag="WHG62_001015"
     CDS             complement(927..2192)
                     /gene="ftsY"
                     /locus_tag="WHG62_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ1725140.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESETAQAIENIKEDAE
                     SLAESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAIAETVG
                     EAVGQVKEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            2337..3905
                     /gene="msrAB"
                     /locus_tag="WHG62_001016"
     CDS             2337..3905
                     /gene="msrAB"
                     /locus_tag="WHG62_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ1725141.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKAAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            complement(4007..4492)
                     /locus_tag="WHG62_001017"
     CDS             complement(4007..4492)
                     /locus_tag="WHG62_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ1725142.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEEIRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(4519..5367)
                     /locus_tag="WHG62_001018"
     CDS             complement(4519..5367)
                     /locus_tag="WHG62_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ1725143.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            complement(5461..6462)
                     /locus_tag="WHG62_001019"
     CDS             complement(5461..6462)
                     /locus_tag="WHG62_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1725144.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            6521..7252
                     /locus_tag="WHG62_001020"
     CDS             6521..7252
                     /locus_tag="WHG62_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ1725145.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGLFTLINRAMTRYMARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMPETQNTLSR
                     LKGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKVHDLPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTPPRKYERMLCVKPSLS"
     gene            7228..7500
                     /locus_tag="WHG62_001021"
     CDS             7228..7500
                     /locus_tag="WHG62_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HEZ1725146.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            7555..8925
                     /gene="glmU"
                     /locus_tag="WHG62_001022"
     CDS             7555..8925
                     /gene="glmU"
                     /locus_tag="WHG62_001022"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ1725147.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLESCEVGENNRIGPYARLRPQ
                     ARLSDDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNIEDNKLALARARQTVIEGWMR
                     PEKDKQ"
     gene            9000..9329
                     /locus_tag="WHG62_001023"
     CDS             9000..9329
                     /locus_tag="WHG62_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ1725148.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNKTESAADLAAQVL
                     DANGAVLQNGDTVILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(9401..10666)
                     /gene="efeB"
                     /locus_tag="WHG62_001024"
     CDS             complement(9401..10666)
                     /gene="efeB"
                     /locus_tag="WHG62_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ1725149.1"
                     /translation="MSKKQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPVHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(10930..12096)
                     /locus_tag="WHG62_001025"
     CDS             complement(10930..12096)
                     /locus_tag="WHG62_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ1725150.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGA
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            complement(12093..12932)
                     /locus_tag="WHG62_001026"
     CDS             complement(12093..12932)
                     /locus_tag="WHG62_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ1725151.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIAVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            13144..14469
                     /locus_tag="WHG62_001027"
     CDS             13144..14469
                     /locus_tag="WHG62_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ1725152.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPAPAGTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGKYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELTGSGNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
BASE COUNT         3390 a         4350 c         3673 g         3177 t
ORIGIN      
        1 ttagaagttg cccgaaacct caaaaaaaaa accgaaaccg tacaagccgg attcccgcct
       61 gcgcgggaat gacgggctaa ataatatcaa accataaatc ctgccaagaa acattatttt
      121 cttcaatcag ttgcaatttc caagccctgt tccatttctt caactgtttt tcccgagtaa
      181 ttgcgctctc catcgtagga tgcagttcat accaaaccag catagtaacg ttgtaccgtg
      241 atgtaaatcc ctcaatcaaa tgttccctat gttggtaaat acgttgcacc aaatcagatg
      301 taacgccaat gtataacgtg ccattacgtt ggcttgctaa aatataaacc gcaggctgca
      361 tataataccc ttttgaatta tttaaattta tattcccgcg aacaccatcc cgtgattact
      421 ttaacccttc gttattccca tagctttcca tcattcccgc aactcttcgt cattcccacg
      481 aaagtgggaa tctagaacgc aaaatctaaa gaaaccgttt tacccgataa gtttccgcac
      541 cgacaaacct agattcccgc ctacgcggga atgacggcgg agcggtttct gttttttccg
      601 ataaatgccg caatctcaaa tcccgtcatt cccacgaacc tacattccgt cattcccacg
      661 aaagtgggaa tctaggtctg tcggcacaga aacttatcgg gtaaaacggt ttctttagat
      721 tttacgttct ggattcccgc ctgcgcggga atgacgggtc ttttataacc tttgaatatt
      781 gctgttatcc caaggtctag attcccgcct gcgcaggaat gacgggtctt ttataaactt
      841 tgaatattgc cgttatccca aggtctagat tcccgcctgc gcgggaatga cggcatcggt
      901 ctgctgtttt cggacggcat ttcggctcaa tccagcagtg cgtccacaaa cgcgcgcgcg
      961 tcaaacgggc gcaaatcgtc tatgccttcg cccacgccga tatagcggac ggggacgggg
     1021 cggtcggagg caagcgcggc gaggatgccg ccttttgccg tgccgtcgag tttggtaacg
     1081 ataagccccg tcagccctaa tgcgtcgtca aaggctttga cttggttgac ggcgttttgc
     1141 ccgatgttgg catcaagcac gacgatgatt tcgtgcggcg cgtcgggcat ggctttttgc
     1201 agcacgcgtt tcactttttt gatttcttcc atcaagtgaa gctgcgtggg caggcggccg
     1261 gcggtgtcgg ccagcacaat gtcgatgccg cgcgctttgg cggcttggac ggcatcgaag
     1321 cacacggcgg cggaatcgcc cgtggtttgc gaaatcacgg ttacgttgtt gcgttcgccc
     1381 caagcttgaa gctgctcacg cgcggcggcg cggaaagtat cgccggcggc aagcagcaca
     1441 gatttgccct gcgcttggaa atatttggcg agtttgccga tggatgtggt tttgcccgcg
     1501 ccgttgatgc cagcaagcat gatgacaaac ggctctttgg tttcgggcaa aaccagcggt
     1561 ttctctagag gcttaatcag gtcgtacaag gcttctttca gcgcgccgcg caattcgttg
     1621 ccgtctttca gccctttgag gctgacgcgg tcgcgcacgt ctttcatcag gtattcggtg
     1681 gcttccatgc ccatgtcgct ggtaatcagc acggtttcca gctcttcgta caaatcttcg
     1741 tcgatttgtc cgccgccgaa cacgcccgcc agcgatttcg ccattttgtc gcgcgatttg
     1801 gtcaaacctt gtttcaaacg cgccgcccaa ccgagcttgt gttcttcagt tgtcgcaacg
     1861 gcttctttaa cttgcccgac agcctcgccg acggtttcgg caatggcttc ttttgccgct
     1921 tcgacttgtt ccgctgcttt ttccgccgct tcctctgctt cagacagcat ctcggcaacg
     1981 gtttccttta cctgttcaac cgcaccgctg acggtttcaa cggcagattc gacctgccct
     2041 ttgacgcttt ctgctaaaga ttcagcatct tctttaatat tttcaattgc ttgagcggtt
     2101 tcggattctg cttttgctgc agtttcctga acttgagcct cctcgggagc cggcgtttcc
     2161 tgttttttct tgcgacggaa gaagctgaac attgaatttt ccttttaatt ttagaaactt
     2221 gaaacagggc gtattgtagc gtattttacg cggcaaggtt gtctgaaaat ccgagctgta
     2281 aggtttcggc atctcaaacg tctaatcatg caaaccgtcc acacaggaaa ctcaaaatga
     2341 aacaccgtac tttcttttcc ctttgcgcca agttcggctg cctgcttgcg ctgggtgctt
     2401 gttcgcccaa aatcgtcgat gccggagccg cgaccgtgcc gcacacttta tccactttga
     2461 aaaccgcaga caaccgcccc gccagtgttt acttgaaaaa agacaaaccg acgctgatta
     2521 aattttgggc gagctggtgt cctttgtgtc tgtccgaatt gggacagacc gaaaaatggg
     2581 cgcaagatgc aaaattcagc tccgccaacc tgattaccgt cgcgtctccg ggctttttgc
     2641 acgagaaaaa agacggcgac ttccaaaaat ggtatgccgg tttgaattat cccaagctgc
     2701 ccgtcgtaac cgacaacggc ggcacaatcg cccaaagcct gaatatcagc gtttacccct
     2761 cgtgggcgtt aatcggtaaa gacggcgacg tgcagcgcat cgtcaaaggc agcatcaacg
     2821 aagcgcaggc gttggcgtta atccgcgacc cgaatgccga tttgggcagc ttgaaacatt
     2881 cgttctacaa acccgacact cagaaaaagg attcaaaaat catgaacacg cgcaccattt
     2941 acctcgccgg cggctgcttc tggggcttgg aagcctattt ccaacgcatc gacggcgtgg
     3001 ttgacgcggt atccggctac gccaacggca acacgaaaaa tccgagctat gaagacgtgt
     3061 cctaccgcca tacgggccac gccgaaaccg ttaaagtgac ctacgatgcc gacaaactca
     3121 gcctagacga catcctgcaa tatttcttcc gcgtcgttga tccgaccagc ctcaacaaac
     3181 agggcaacga caccggtacg caataccgca gcggcgtgta ctacaccgac cccgccgaaa
     3241 aagccgtcat cgccgccgcc ctcaaacgcg agcagcaaaa ataccaactg cccctcgttg
     3301 ttgaaaacga gccgctgaaa aacttctacg atgccgagga ataccatcag gactacctga
     3361 ttaaaaaccc caacggctac tgccacatcg atatccgcaa agccgacgaa ccgctgccgg
     3421 gcaaaaccaa agccgccccg caaggcaaag gcttcgatgc ggcaacgtat aaaaaaccga
     3481 gtgacgccga actcaaacgc accctgaccg aagagcaata ccaagttacc caaaacagcg
     3541 cgaccgaata tgccttcagc cacgaatacg accatttgtt caaacccggc atttatgtgg
     3601 acgttgtcag cggcgaacct ttgttcagct ccgccgacaa atatgattcc ggctgcggct
     3661 ggccgagctt cacgcgcccg attgatgcaa aatccgttac cgaacacgat gatttcagct
     3721 acaacatgcg ccgcaccgaa gtgcgcagcc acgccgccga ctcgcatttg ggacacgtct
     3781 tccccgacgg cccgcgcgac aaaggcggac tgcgctactg catcaacggc gcgagcttga
     3841 aattcatccc gctggaacaa atggacgcgg caggctacgg cgcgttgaag agtaaagtga
     3901 aataagccgc accgccgcct aacccgacaa aataccgtct gaaacctgca acgtttcaga
     3961 cggtattttt tatccggcgg ggattttgtc cagacggaga ttttgtttag acggcatcgc
     4021 cgccgttttc aatcagcccc gccaaccgtt ccaacgcgaa ggcgaccgcc tgcgcgcgga
     4081 cggattcgcg gttgccatca aaacggcgta tttcttcgca acttccgccc ggaaaggcaa
     4141 acccgaacca aactgtgccg acgggtttgc tttcgctgcc gccgcccggt ccggcgatgc
     4201 cggaaatacc gacggcgtaa tccgcctgcg ccacggcttt cgcgccgcgc gccatctcat
     4261 agacggtttg gcggctgacc gcgccgtgtt cgagcagggt ttcgggcaac acgcccaagc
     4321 ggtcttcttt ggctttgttg ctgtatgtta caaaactctg gtcgaaccat tgcgaactgc
     4381 ctgcaacgct tgtgaatgcg gcggcaagca ttccgcccgt acaggactcg gcacagctta
     4441 cggtttgacg ttttttcgtc aggtttcggg cgatggtgtg cagcgcgtcc attttcccac
     4501 tcccctttca gacggcgttt aagaattgat gatgtgtatg tcgcgttgcg ggaacgggat
     4561 gttgatattg actttgcgga ggttttcgac cacttgttcg ttcaagtcgc attgcagcgt
     4621 ccagcggtct gcttcgtttg cccaagccca taatgtgatt tcgatggcat tgtcgcccaa
     4681 ggcggtgatg taggcggcgg cctgccgctc ttcgttttga acgctcaagg ggtgttcgac
     4741 ggcggctttc aacaccgcct ctttcgccac tttcaaatcg cagttgtaat cgacgccgac
     4801 tatcacttgg gcgcggcaca gcggcagggt ggaacggttg acgatgctgt tgcccatcac
     4861 cacgctgttg ggcagcacga cttcttcgtt gtcggtcgtc cgcaaagaag tctgcaccat
     4921 tttaatctct cggacatatc cttcaaaacc gccgacgcgg ataaaatcgc cgactttgaa
     4981 cgggcggaac aggataatca gcgcgccggc ggcaaaattg gacagctggt ctttcaagga
     5041 caacgccacc gccaaacccg cgccgccgat taaggcggtt acggatgttg tggaaacgcc
     5101 caatctgccc aatgcggcaa taatcaccaa aatcaataag ccgatattgg caacattaca
     5161 caaaaaacta atcagcgtgg catcgacctg cgcgcgcgtc atcgccgccc tcatcacagc
     5221 gacaatgcgt ttcgccgccc attttccgac caaaaaaata agcagcgcgg cggcaaggtt
     5281 cagcccgaac gcccacgcct tttcagccag atgctcccaa ccggaaacac tgatcaggtg
     5341 taaaaaatca aattgtttga agtccattgt tttcctcttg atcgaacatc cgccccgtgc
     5401 ggcgtaatcg gcacaggtgt aaaaatgccg tatgaagccc tgcggggagg tatgtttgtt
     5461 ttatttcaaa accgttctaa tccaacggga aacccatccg cgctggttcg catcaatatc
     5521 gcgctgcgcg ggggcggtgg tgtgcgtcgg ggcttgggcg aagcggaaca cgtcgggcag
     5581 gcgcgtgttt ttgacggcgg ggtaaaccca catttcggac ggaaccgcct gctgcacttc
     5641 ccgactttgc agccattgca ccagttttgc cgccagcttc ggctgtttcg cgcccttcaa
     5701 gaccgccgcg ccttcgacct ggcggaatac gccgcctttt aaaaacaggt tgcccgtcgg
     5761 cggctcgctg tatttgcctt tggaaaaata cacttccgcc gccgggctgg cggcataacc
     5821 gaccaccagc ggatacgcgc cgccgttgtg cgaaaagtcg gtgtaatacg cctcgctcca
     5881 gcctttggcg accttcacgc cgttctgccg catctgtgcc caccatttga acgcgccttc
     5941 ttcgcccaga ccgctgatgt tcgccatcag gaagcccagc cccggggacg acgtggcggg
     6001 agacggcacg accaataggt ttttatattc ggggcgggtc aaatcctgca gggtttgcgg
     6061 cagaggaagc tttttgcctt caaaccattt tttgtcgtaa ttgatggaca catagccgta
     6121 atcgaccgcc aaagccgaag gcagcccgac cgcgacgggg gcggattcgg gttgcgccgc
     6181 cgccaaaatg cccatttccc gcgccttgcc gatattggcg ttgtccaaac cgtacaccgc
     6241 gtcggcaatc gggttggcgc ggctcaaaat cagtttgttg agcatttcgt tcgcgccgcc
     6301 cgcctgaata atcgacacct tcgcatcgtt tgcccgctcg aagcgcgcaa tcagcccttt
     6361 gggcaggctg aacgacttat gcaccgccag cctgacttcc gtctgcgcct gcaggtatgc
     6421 cgaaaccgcc agcagcggca gcagccaaat tttccgtttc attccgagtc ctcctctatt
     6481 cgctgtaaaa taacattcta acaaattttc acggttcaac atgcaagaaa acccgaccgt
     6541 gtggctgttc gacctcgaca acacgctgca caatgccgat gccggcctct tcacactcat
     6601 caaccgcgct atgacacgct atatggcacg ccgcctcaaa ctctccgaat ctgccgcgtc
     6661 cgacctgcgt caagactatt ggcaccgcta cggcgcaacg ctcgccggac tgcaaatcca
     6721 ccatcccgaa atcgacatcg ccgaattttt gcgcgaaagc catccgatcg atgcaatcct
     6781 gaccaggctg cacggcatgc ctgaaacaca aaacaccctg agccgcctaa aagggcgcaa
     6841 ggcagttttt tccaacggcc cgtcgtttta cgtccgcgcc gttgtcggcg cactcggttt
     6901 ggaaaaccgt ttcgacgcac tgttcggcac ggatgatttc ggactgctgt acaaacccaa
     6961 tccgcaagcg tatctcaatg tctgccgcct tttggacgta ccgcccgaat gctgcattat
     7021 ggtggacgac agcgcggaca acctgcatca ggcaaaagca ttgggcatga aaaccgtccg
     7081 gttcggtgca aaagtgcacg acctgccctt tatcgatgct tccgtaagcg atatggcgca
     7141 actggctcgg tatgcagaaa ctttgtcaga acaccgccaa aatcattaca atacccgcac
     7201 acccccccga aaatacgaaa gaatgttatg cgtaaaacct tccttatcct gatgactgcc
     7261 gccgcccttt tgtcgggctg cgcgtgggaa acttatcaag acggcaacgg caagaccgcc
     7321 gtccgtcaaa aatatcccgc cggcacgccc gtttattacc aagacggcag ctactcgaaa
     7381 aatatgaact acaaccaata ccgtcccgaa cgccatgccg tgttacccaa ccaaaccggc
     7441 aacaacgccg acgaagagca tcgccaacac tggcaaaagc ccaaatttca aaaccgataa
     7501 acccacccta tgccgtctga agccctttca gacggcattg cacaggaaaa cgctatgccg
     7561 caaaacactt taaacatcgt catcctcgcc gccggcaaag gcacgcgcat gtattccaaa
     7621 atgcccaagg ttttgcacga aatcggcggc gaaacaatgc tcgggcgcgt tatcgacacc
     7681 gccgccgcgc tgaatccgca aaacatctgc gtcgtcgtcg gccacggcaa agagcaagtt
     7741 ttagacaccg tcaaacgcga tgtcgtctgg gttgaacaaa ccgaacagct cggcaccggc
     7801 cacgccgtca aaaccgccct gccccacctt gccgccgaag gccgcacgct ggtgttgtac
     7861 ggcgacgttc ctttaattga cgttgaaacc ctcgaaaccc tgctcgaagc cgcaggcaac
     7921 gaagtcgggc tgttgaccga cgtgcccgcc gacccgtcag gtttggggcg catcatccgc
     7981 gacggcagcg gcagcgtaac cgccattgtc gaagaaaaag acgccgatac cgcccaaaaa
     8041 gccgtgaaag aaaccaacac cggcatcctc gtcctgccca acgccaaact ggaaaactgg
     8101 ctgaacagcc tttccagcaa caatgcccaa ggcgaatact acctgaccga cctcatcgcc
     8161 aaagccgttg ccgacggtat taaagttcat cccgtccaag tccgcgcctc ccacctcgcc
     8221 gccggcgtga acaacaaacg ccagctcgcc gaactcgaac gcatcttcca aaccggacag
     8281 gcgcaagaat tgctcaaagc aggcgttacc ctgcacgacc cggcacgttt cgatttacga
     8341 ggccgtctga aacacggaca ggatgtcgta attgatgtga actgtatctt tgaaggcgaa
     8401 gtcgaaatcg gcgacaacgt cgaaatcggc gcaaactgcg tcatcaaaaa cgccaaaatc
     8461 ggtgcaaaca gcaaaatcgc ccccttctcc cacctcgaaa gctgcgaagt cggcgaaaac
     8521 aaccgaatcg gcccgtacgc ccgcctgcgt ccgcaagccc gcctttcaga cgacgtacac
     8581 gtcggcaact tcgtcgaaat caaaaacgcc gccatcggca aaggcaccaa agccaaccac
     8641 ctcacctaca tcggcgatgc cgaagtcggc agcaaaacca acttcggcgc gggtacgatt
     8701 attgccaact acgacggtgt gcacaaacac aaaaccgtta tcggcgacga agtccgcatc
     8761 ggttcaaact gcgtcctagt cgcccccgtt accctcggca acaaagtaac cacaggcgca
     8821 ggcagcacga ttacccgcaa tatcgaagac aacaaactcg ccctcgcccg cgcccgccaa
     8881 accgtcatcg aaggctggat gcggcctgaa aaagacaagc aataaagcta tgccgtctga
     8941 agccggtttc aggcttcaga cggtacccca aaacaaacat ccgataagga ctgcaaacca
     9001 tgtcattacc cccatgcccg caatgcgcct ccgaatacac ctatgaagac ggcggacaat
     9061 acatctgccc cgaatgcgcc cacgaatgga ataaaaccga atccgccgcc gaccttgcgg
     9121 ctcaagtgct cgatgccaac ggcgcagtgc tgcaaaacgg cgacaccgtc atcctcatca
     9181 aagacctcaa ggtaaaaggc agctcgatga cgatcaaaca aggtacaaaa gtcaaaggca
     9241 tacgcctgca agaaggcgat cacaacatcg gctgcaaaat cgacggcagc gcgatgaatt
     9301 taaaatccga attcgtcaaa aaagcctgac cgcccaaaaa caagaaacgc cgtccgaacc
     9361 cgtttggcaa ggttcggacg gcgtttttta tatggcggat ttatacgccc agcagccctt
     9421 gccccaaaaa gccgcctttt tccacgccgg gcaagacgaa gaaatagccg ccgccgaagg
     9481 ggctgatgta ttcttccagc ggttcgccgt tgaggaggtt ttgcacgaag atgaatccgt
     9541 cggcaaggtt tgcctgatag cagacgaaca ccagcccgac atcaagctgt ccgcttgagg
     9601 cgagtccgcg cgaatagctg taggcgcggc ggaagaggcg gtgttttttg aggaattcgg
     9661 gatcgcgcgg attcgccagg cgtatatggc tgtctttggg cgtggtattc ccctcggggt
     9721 ctttggcaaa atccggttgg tcggcttctt ttttgccgtc catcggcgca ccgctgtatt
     9781 tgcgccgccc gaaaatgtcg gtttgctctt gaagcggcgt cctgtcccaa aactcgacaa
     9841 agtggcggat aaggcggact gcctgatagc tgccgttttt cgcccactcc ggttcgtcga
     9901 ggctgttggc ggccacaccc gtccacaaaa cctcgtcggc agttttgggg tcggaaactt
     9961 tggggttgcc cgtgccgtcc ctgaagccca acaggttgcg cgccgccatc gcgccgggtt
    10021 cggatttagg ctgccacccg tcgatactcc aacggataac ggcggtttgg acggtgtgtt
    10081 tgatgatgtc gcgcagggcg gcttggcagg tttcgggggt gaaggcgcag atttgcaggc
    10141 tcaaatcgcc gtcgcaccag cttttttgca gcttatcgtt ggagaagtcg cgcatttcct
    10201 gcaaatgaac cggttttttg tctttgagtc cgaaccggcc gtcaaacagg ctgctgccca
    10261 cccccacggt aacggtcaac ccgtcggggt tgaaggcttt gcccaaaatg ccgctgccgg
    10321 cgggtggaag tttgtcgtcg ccgtcttggt attcgccgcc ttgggtgaga aactcgatgc
    10381 gggcggtcag cgtgcggaac aggttttcca gctgcttggc actttgcgcg gttacgtcga
    10441 aggcgcacat aatcgaaaac gcctgctgcg gcgtaacgat gcctgcctga tgttcgccgt
    10501 agcagggata ggcttggggc gagtgttggc tttcggcggt gcgttcggcg gtttcgccct
    10561 gttttttgcc gccgagataa cctccgattg cgccgactgc tccggctgcg atcgcggttt
    10621 taaaaagagt gcgcctggtc ggttgtgcgg gttgtttttt gctcatggtg tttccttcaa
    10681 tatccgtgca gcaggatggg tatccctgca cgccgttttt ccattaaccg atagcggcag
    10741 gttgaaatcc cgccctgcaa tatatggcgg atatagtgga ttaacaaaaa tcaggacaag
    10801 gcgacgaagc cgcagacagt ataaatagta cggcaaggca aggcgaggca atgccgtact
    10861 ggtttttgtt aatccactat aaaacttcag acggcatctg ccgccaaata ccgtctgaac
    10921 gcttgcggct tatttcaagc cgagtatgcc gcgaagttgg gcaaggtctt cggcaagcgc
    10981 gttaatagag gcctgtaacg ctttgcggtc ggcttcgccc agcttgtcgt aggtttcaaa
    11041 accgtcttta gtccggtatt tcgccagaat ttcgttgacc tgtttgaagt tggtatcggt
    11101 tttttccaac aaggctttgt ttttagcctc gatcagcgga cggaacaaat cgacgatttt
    11161 tttcgaaccg tccacattgg cttggaaatc gctcaaatcg gtgtggctgt accggtcttc
    11221 ttcgccgctg attttactgc ccgccacttc ttcaatcagt tcggatgcgc cgccgaccac
    11281 cttgcccgga ggaaacgcca atgcgtcgat ttctttttgc agggcttcga catcggtcat
    11341 cagtttcgct gcaatttcct tcacgccgga cacgtctttt tccacccaaa gggcgtattc
    11401 gatacggtga aagccggtaa atccggcatc tttcgcgccg tctttgaagt cgtcttcacg
    11461 cgcatcgatg acggggtcga gttcgctgaa aagctcggca atcggttcga tgcgttcgta
    11521 atggacgcgg gtgtcggcaa acagggattt cgccttttca atgtcgcctg ctttgacggc
    11581 ttcggtaaag gttttggttt tcgccaccag ctctttaacc tcgccttgaa cgtaggcttt
    11641 atagtcggcg agcggttggg acagtttttc caaatccgct tcgttggcgg tgtctttaaa
    11701 gccgctgtcg gttaccacca gcttgccgcg cggattggtc aaaagaccgc aagtcatttc
    11761 gtattcgccc ggcaacaggg tgacggtcat tttatcggaa agtccggggg cgatgttttc
    11821 gcgctcgtcc accaccatca cgcctttcag gatttcccat tcgagcttgc ggccgctgtt
    11881 gtttttaata ttgaacacaa cctgtccgct cggcacggtc agttccatcg gttcgcaggc
    11941 attgtcgttg acggcgatac tgaccgcacc gccctcgttg gcggtttgcg cctcaccgga
    12001 cgctgccggc gcagctttct ccgcctccgg cggctggcac gcggtcaaac ctaaggcaag
    12061 catcacggac aatgcggtca aattgaattt tctcatttca gctcctcttt acgggttaaa
    12121 gtttcagacg gcctgctgcc gcacaaaaac caagttatga cgggaataag gtacagcagc
    12181 caaaccaagg cctcgccctg cgtcggatgg tcggtatagc cgaaaaatcc gccgagcagc
    12241 acgcccaacg ggctgtcttc gtgcaaatat tttgatgagt cgaacacaat gtcctgaagc
    12301 gcgttccaaa tacctgcctc atgcagcgcg cgcagcgagc cggcaagcag accggcggca
    12361 acggcaatca aaaacgcccc cgtccaacgg aaaaacttcg ccagattcag gcgcatcccg
    12421 ccctgataaa tcaacgcgcc aatcacggcg gcagccaaaa cccccgctac cgcaccggcc
    12481 ggcatctgcc acgtcgggct ctgtttgaat acggcaagca ggaaaaaaac gctctccaga
    12541 ccttcgcgcg ccacggcaag aaacgccata ccgaccaagg cccatccttg accgctgcca
    12601 cggttcaaag ccgcctgcac agaatcctga agctgccgct tcatcgaacg cgccgccttt
    12661 ttcatccata aaatcatata agtcagcatg gcaacggcaa ccaaaccgat gatgccgacg
    12721 acaaactcct gctgcttctg gggaatctcg cctgttgccg aatggatgcc gtaccccagc
    12781 cccaaacaca tcaaagaagc aagaacaacc ccaaaccaga ccttaggcat cagtttggaa
    12841 tgtccggact gtttcagaaa accggcaacg atgccgacaa tgagcgcggc ttcgataccc
    12901 tcgcgcaaca taattaaaaa agcgaccagc ataaacgcga acgaacaagg atgatgaata
    12961 atatattatc ggaatatttt cattgcttgt aaatacaaat gcaagttatt tttatctgca
    13021 gtaccgcgcg gcggaaagtt ccgcaggctg cagctgcgcc ctgtgttaaa atcccctctc
    13081 cacggctgct gcaacgccgc ccgaaaccat ctttttttat tactgctgac aacattgtcc
    13141 attatgaaaa aatacctgtt ccgcgccgcc ctgtgcggca tcgccgccgc catcctcgcc
    13201 gcctgccaaa gcaagagcat ccaaaccttt ccgcaacccg acacatccgt catcaacggc
    13261 ccggaccggc cggtcggtat ccccgccccc gccggaacga cggttgccgg cggcggggcc
    13321 gtttataccg ttgtgccgca cctgtccctg ccccactggg cggcgcagga tttcgccaaa
    13381 agcctgcaat ccttccgcct cggctgcgcc aatttgaaaa accgccaagg ctggcaggat
    13441 gtgtgtgccc aagcctttca aacccccgtc cattcctttc aggcaaaaca gttttttgaa
    13501 cgctatttca cgccgtggca ggttgcaggc aacggaagcc ttgccggcac ggttaccggc
    13561 tattacgagc cggtgctgaa gggcgacgac aggcggacgg cacaagcccg cttcccgatt
    13621 tacggtattc ccgacgattt tatctccgtc cccctgcctg ccggtttgcg gagcggaaaa
    13681 gcccttgtcc gcatcaggca gacaggaaaa aacagcggca caatcgacaa taccggcggc
    13741 acacataccg ccgacctctc ccaattcccc atcactgcgc gcacaacggc aatcaaaggc
    13801 aggtttgaag gaagccgctt cctcccctac cacacgcgca accaaatcaa cggcggcgcg
    13861 cttgacggca aagcaccgat actcggttac gccgaagacc ctgtcgaact tttttttatg
    13921 cacatccaag gctcgggccg tctgaaaacc ccgtccggca aatacatccg catcggctat
    13981 gccgacaaaa acgagcatcc gtatgtttcc atcggaaaat acatggcgga taagggctac
    14041 ctcaaactcg gacaaacctc catgcagggc attaagtctt atatgcggca aaatccgcaa
    14101 cgcctcgccg aagttttggg tcaaaacccc agctatatct ttttccgcga gcttaccgga
    14161 agcggcaatg acggccctgt cggcgcactg ggcacgccgc tgatggggga atatgccggc
    14221 gcagtcgacc ggcactacat taccttgggc gcgcccttat ttgtcgccac cgcccatccg
    14281 gttacccgca aagccctcaa ccgcctgatt atggcgcagg ataccggcag cgcgattaaa
    14341 ggcgcggtgc gcgtggatta tttttggggt tacggcgacg aagccggcga acttgccggc
    14401 aaacagaaaa ccacgggata tgtctggcag cttctgccca acggtatgaa gcccgaatac
    14461 cgcccgtaaa ccggaaaaca atgccgtctg aagcccatcc ctaggcaatc gggcgcatta
    14521 aggcgaagtt ttgcgatacc gcaggcacaa aattcctttc ttatttgacg gaattatagt
    14581 ggatcaaatt
//
LOCUS       DAWGBY010000039        14370 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.039, whole genome shotgun sequence.
ACCESSION   DAWGBY010000039 DAWGBY010000000
VERSION     DAWGBY010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14370
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.039"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            237..1196
                     /locus_tag="WHG62_001028"
     CDS             237..1196
                     /locus_tag="WHG62_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725153.1"
                     /translation="MYQNYDIVILSLGNGLLTRFFRNSSKLNLTLPIVITLFPGVIFG
                     DSESIITRLGANILLFNNYYDYQIGNKFKERYNLSCTNILYGYPILRKKHHCSDGNKV
                     YFIDQVKIPDGKKERLLILKKLIALANRYPHKDLVLLLRVHQNDITVHEDKYSYAELA
                     KNMKLPDNFKIERKRTQDALQEMGYCLSFSSTMLFEAESCGIPIGVISDLGVDKKYAN
                     THFKDSGVLVNLDTVDLDSPNTINPTWAELYTNPDSLSSKEFNQLLEVTSTQPPSFDN
                     YFIAVNDVQPVSMVLLRKFKKLIYHPKQFFVDSKLYKLIKFTK"
     gene            1244..2107
                     /gene="galU"
                     /locus_tag="WHG62_001029"
     CDS             1244..2107
                     /gene="galU"
                     /locus_tag="WHG62_001029"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003778314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ1725154.1"
                     /translation="MQKIRKAVFPVAGMGTRFLPATKASAKEMLPIVDKPLIQYAAEE
                     AVAAGCTELIFITGRNKRNIEDHFDKAYELETELEMREKHKLLGYVQKILPDHVSCIF
                     IRQAEALGLGHAVLCARPAVGNEPFAVILADDLIDAPQGALKQMVDIYNQSGNSILGV
                     ETVDPSQTGSYGIVEVEQLKSYQRVTNIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     NLPRGAGGEIQLTDGIARLLDHEFVLAHAFEGKRYDCGSKLGYLEATVAYGLKHPELK
                     DDFKELLKQFV"
     gene            2190..3206
                     /gene="galE"
                     /locus_tag="WHG62_001030"
     CDS             2190..3206
                     /gene="galE"
                     /locus_tag="WHG62_001030"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ1725155.1"
                     /translation="MNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL
                     KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPIKYYDNNVS
                     GSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL
                     TDIQKADPRWSMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVF
                     GDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAF
                     EAASGLNIPYQIQPRRAGDLACSFADPSHTKQETGWETKRSLAQMMEDSWRWVSNHPN
                     GYDD"
     gene            3302..4363
                     /gene="rffG"
                     /locus_tag="WHG62_001031"
     CDS             3302..4363
                     /gene="rffG"
                     /locus_tag="WHG62_001031"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ1725156.1"
                     /translation="MKKILVTGGAGFIGSAVVRHIINDTQDAVVNVDKLTYAGNLESL
                     ESLANHPRYAFEQVDICDRAALDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWHDMPSEKKAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLEELVPN
                     KPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVEWYLNN
                     QTWWSRVLDGSYNRERLGS"
     gene            4576..5451
                     /gene="rfbA"
                     /locus_tag="WHG62_001032"
     CDS             4576..5451
                     /gene="rfbA"
                     /locus_tag="WHG62_001032"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ1725157.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            5506..6045
                     /gene="rfbC"
                     /locus_tag="WHG62_001033"
     CDS             5506..6045
                     /gene="rfbC"
                     /locus_tag="WHG62_001033"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ1725158.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            6207..8255
                     /locus_tag="WHG62_001034"
     CDS             6207..8255
                     /locus_tag="WHG62_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ1725159.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPEINRL
                     VQTQRRATRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPKIYR
                     NLDLLRTVRERNPDAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQTDILTCLQY
                     ADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGCFAKKLGKIKQLYRSFK
                     "
     gene            8392..9651
                     /locus_tag="WHG62_001035"
     CDS             8392..9651
                     /locus_tag="WHG62_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEZ1725160.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKNTSDSSTPTT"
     gene            10020..11426
                     /locus_tag="WHG62_001036"
     CDS             10020..11426
                     /locus_tag="WHG62_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ1725161.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            11644..12858
                     /gene="gltS"
                     /locus_tag="WHG62_001037"
     CDS             11644..12858
                     /gene="gltS"
                     /locus_tag="WHG62_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ1725162.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            12957..13973
                     /locus_tag="WHG62_001038"
     CDS             12957..13973
                     /locus_tag="WHG62_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ1725163.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSAALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            13984..14181
                     /locus_tag="WHG62_001039"
     CDS             13984..14181
                     /locus_tag="WHG62_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725164.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            14199..14348
                     /locus_tag="WHG62_001040"
     CDS             14199..14348
                     /locus_tag="WHG62_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725165.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAVFSCVSYADVSTHKTAHKAL
                     PYVPS"
BASE COUNT         3832 a         3620 c         3310 g         3608 t
ORIGIN      
        1 acttaatatc taatatttaa aatacaatga ataaaaaacg agtcctatta attgctagtt
       61 atgattcttt tttgaatact ggatatgctg ttgcaaaaga aattaactat tcaacaatcg
      121 atatttatat ccaccaaaca aaaaaaaata ttctttcgga atcacaatta agtttaaatg
      181 ggctttcttt aaaagaaatc aatttttttc atattgatga ttatttcgac aaattaatgt
      241 accagaatta tgatattgtt attctatcat taggtaatgg tttactgacg cgtttttttc
      301 ggaatagtag caaacttaat ttaacattac ctatagtaat tactctattt ccaggggtaa
      361 tttttggtga ttcagaaagt attataacta ggttaggtgc taatatttta ttgttcaata
      421 attattatga ttaccaaata ggcaataagt tcaaagaacg ttacaactta tcgtgtacaa
      481 atattttata tggttatcct atcctacgaa aaaaacacca ttgctctgat ggcaataaag
      541 tttatttcat tgatcaagta aaaattccag atggaaaaaa agaaagatta ttaattctaa
      601 aaaaattaat agcactggct aatcgctatc cacataaaga tttagtacta ttattacgtg
      661 tccatcaaaa tgatatcaca gtacatgaag ataaatactc ttatgctgaa ttagcaaaaa
      721 atatgaaatt gcctgataat tttaaaatag agagaaaacg gacacaagat gccttacaag
      781 aaatgggata ttgtttatca ttctcttcaa caatgttatt tgaagctgaa agctgcggaa
      841 ttcctattgg tgtcattagt gatttagggg ttgacaagaa atatgccaat acacatttca
      901 aagatagtgg tgttttggtt aatttagata cggtagactt ggactctcca aataccatta
      961 atccaacttg ggctgaacta tatactaatc cagatagcct ctcttcaaaa gagtttaacc
     1021 aattattaga ggttacttct actcaaccac ctagttttga taattatttt attgcagtta
     1081 atgacgttca gcctgtatct atggttctgt tacgtaaatt taaaaagctt atatatcatc
     1141 ctaagcaatt ctttgttgat tcaaaactat ataaattaat taaatttact aaataatttt
     1201 tactatgggt tgccttattt atttcaaagg agtgacataa aaaatgcaaa aaattcgtaa
     1261 agctgtattc cctgtagctg gcatgggaac ccgattctta cctgccacga aagccagcgc
     1321 taaagaaatg ctgccaatcg tggacaaacc gttaattcaa tatgctgcgg aagaagccgt
     1381 tgccgcgggt tgtactgaat tgatttttat caccggccgt aataagcgta atattgaaga
     1441 ccacttcgat aaagcctatg agttggaaac tgaactggaa atgcgtgaaa agcataaatt
     1501 gcttggctat gtgcaaaaaa ttctgcctga tcatgtcagc tgtattttca ttcgtcaggc
     1561 agaagctttg ggcttgggtc atgcggtatt atgcgcccgt cctgctgtcg gtaatgagcc
     1621 ttttgccgtg attttggccg atgacttgat tgatgcacca caaggcgcac tcaagcagat
     1681 ggtagatatt tacaatcaaa gcggcaacag cattttaggg gtagaaacag tcgatccttc
     1741 gcaaaccggt tcatacggca ttgtcgaagt ggaacagctg aaaagctatc agcgtgtaac
     1801 caatattgtg gaaaaaccaa agcctgaaga tgcgccgtca aatttagcgg tagtcggccg
     1861 ttatattttg acaccgcgta tttttgattt gctgactaat ctacctcgtg gtgcaggtgg
     1921 tgaaatccag ctaactgatg gtattgcccg cctacttgac catgaatttg tcttggcgca
     1981 tgcgtttgaa ggtaagcgtt atgattgtgg cagtaagttg ggctatctgg aagccacggt
     2041 agcttatggc ttgaagcatc ccgaattaaa agatgatttc aaagaattat tgaagcaatt
     2101 tgtataattt taaggccgtc tgaaaaagaa aaggcatcat gttttttaca ctttcaggcg
     2161 gccttttaaa cataaagaag gaaaacgtga tgaacattct cgttaccggc ggcaccggtt
     2221 ttatcggctc gcacaccgtt gtttctttgc tgaaaagcgg tcatcaagtc gtgattttgg
     2281 ataacctatg caattccagc atcaatatcc tgccacgctt gaaaacgatt accggccaag
     2341 agattccgtt ttatcaaggc gatatccgcg atcgtgagat tttgcgccgt atttttgcgg
     2401 aaaaccgcat tgattcggtg attcattttg ccggcttgaa agcggtgggt gaaagtgtgg
     2461 ccgagccgat aaaatattat gataataatg tttccggcag cttggtgttg gcggaagaaa
     2521 tggcgcgtgc gggcgtgttt agcattgtgt tcagttcttc ggcgacggtt tatggcgatc
     2581 cgggcaaagt gccttatacc gaggatatgc caccgggcga caccaccagc ccttacggcg
     2641 catcgaaatc gatggttgag cgcattctca ctgacattca aaaagccgat ccgcgctgga
     2701 gcatgatttt gttgcgttat ttcaatccga ttggcgcgca tgaaagcggt ttgattggcg
     2761 agcagccaaa cggtatccca aataatttgt tgccttatat ctgccaagtg gcggcaggca
     2821 aactgccgca attagcggta ttcggtgatg actaccctac ccctgatggc acgggtatgc
     2881 gcgactatat tcatgtgatg gatttggcag aaggccatgt cgcggctatg caggcgaaaa
     2941 gcaatgtagc aggcacgcat ttgttgaact taggttccgg ccgcgcttct tcggtgttgg
     3001 aaatcatccg tgcctttgaa gccgcatccg gcttaaatat tccctatcaa atccaacccc
     3061 gacgcgccgg agacttggcg tgttcctttg ccgacccgtc ccataccaaa caagagacag
     3121 gttgggaaac caaacgcagc cttgcgcaaa tgatggaaga ttcatggcgc tgggtaagta
     3181 atcatccgaa tggttatgat gattaagtca tgaaattgag aggccgtctg aagtttcaga
     3241 cggcctttgt ttgcgattta tagtaaaatt taccttatca ttttggcgat taatattcat
     3301 catgaaaaaa atccttgtca ccggcggtgc cggttttatc ggttcggcgg ttgtacgcca
     3361 tatcatcaac gatacgcaag atgcggtggt gaatgtggat aagctcacgt atgcgggcaa
     3421 tttggaatcg ctggaatctt tggccaatca tccgcgctat gcgtttgagc aagtcgatat
     3481 ttgcgaccgc gcggcactgg atcgtgtgtt tgccgaacac cagccggatg cggtgatgca
     3541 cttggcagca gaaagccatg ttgaccgcag tattgatggc ccagcggcat ttattgaaac
     3601 caatattgtt ggtacttaca cgcttttgga agcggcgcgc gcgtattggc atgatatgcc
     3661 gtctgaaaaa aaagcggctt tccgtttcca tcatatttcg actgatgaag tgtatggcga
     3721 tttgcacggc acggatgatt tgtttaccga aaccacgcct tacgcccctt ccagtcctta
     3781 ttcggcttcc aaagcctcca gcgaccattt ggtgcgcgca tggctgcgta cttacggcct
     3841 gccgaccatt gtgaccaatt gttctaataa ctacggccct tatcattttc ctgaaaaact
     3901 gattccactg atgattctga atgcgcttga tggcaaaccg ctgccggtgt atggcgacgg
     3961 tatgcagatt cgtgattggc tgtttgttga agatcatgcg cgtgcgctgt atcaagtggt
     4021 cacagaaggc gaaatcggcg aaacttacaa cattggtggc cacaatgaaa aagccaatat
     4081 tgaagtggtg cgcaccattt gcgccctgct ggaagaattg gtgccgaaca aaccgcaagg
     4141 cgtggcgcgt tatgaagatt tgattaccta tgtcaaagac cgccccggcc atgatgtgcg
     4201 ctatgcgatt gatgccgcaa aaatcggccg tgagttgggt tggcagccgc aagaaacttt
     4261 tgaaagcggc atccgcaaaa cagtggaatg gtatttaaac aatcaaactt ggtggtcgcg
     4321 cgtgttagac ggcagctaca atcgtgaacg cttaggcagt taaatagaga cctttgcaaa
     4381 ctccccatct ttggcacatt tcttcgttat gcgctgctcg aaagcttgcc tatctttgtg
     4441 atatgtctgc gctttctgcg ctgctataac ttcgaactgt actcaaatct gtggctttgc
     4501 aaaggcctca aataataaaa atacgttcag acggcatgaa ggccgcctga aaaactacat
     4561 aaggaaagta aactgatgaa aggcattatt ctcgcaggcg gcagcggtat ccgcctttac
     4621 ccgattaccc gcggcgtatc aaagcaatta ctaccggtgt acaacaaacc gatgatttat
     4681 taccccttgt cggtgttgat gttggccgga atccgcgatg tgctggtgat taccaccccc
     4741 gaagacaacg atgctttccg ccgcttactg ggtgatggca gcgatttcgg tattcaaatt
     4801 tcctacgcca tccaacccag ccccgatggt ttggcgcaag cctttttaat tggtgaagaa
     4861 tttatcggcg atgattcggt gtgtttggtg ttgggcgaca atattttcta tggccagcat
     4921 ttcagccaat ccctgaaaga agccgccgct tccgtggaaa ccaaaggtgc taccgtattc
     4981 ggctatcaag tgaaagatcc cgagcgtttc ggtgtgattg agtttgatga gaatttcaaa
     5041 gccctgtcaa tcgaagaaaa accgaaacaa cctaaatccg attgggcggt aaccggcctc
     5101 tatttctacg ataatcgcgt agtcgagttt gccaaacaag tgaagccgtc tgaacgcggc
     5161 gaattggaaa ttaccacctt gaatcaaatg tatttggacg atggttcgct caatgtccaa
     5221 ttgctcggtc gcggtttcgc atggcttgat accggcacac acgccagcct gttggaagca
     5281 gcctcgtttg tcgaaaccat tgaaaacatt caaaacctac aagtcgcctg tttggaagaa
     5341 atcgcatggc gtaatggctg gttgagcagc gaagaaatca gaaacttggc aaagccaatg
     5401 tgtaaaaatg aatatggccg ctatttattg cgcttggttg gcaaagatta agaggttgct
     5461 tttaccagtt ttcaggccgt ctgaaacgct ttttaggaaa acatgatgaa tatcatcgat
     5521 acccgcattc ccgatgtcaa attgctcgaa cccaaagtct tcggtgacga gcgtggtttt
     5581 tttatggaaa ccttccgtga tgaatggttc cgccaaaatg tagccgagcg cactttcgtg
     5641 caggaaaacc acagcaaatc cacccaaggc gtattacgcg gtttacatta tcaaaccgaa
     5701 aatacacaag gcaaactggt gcgcgtggta tcaggcgaag tctttgatgt tgccgtggat
     5761 atgcgtcgtg atagtcctac tttcggccac tgggtcggtg aggttttatc ggcagacaac
     5821 aaacgccaat tatgggtgcc ggaagggttt gcccatggat tttatgtgtt gagcgatgaa
     5881 gcggaattcg tctacaaatg caccgactat tacaacccga atgcggaaca ttccctaatt
     5941 tggaatgatg ccacagtggg aatcgactgg cctttattgg gagaaccaag cctatcggcc
     6001 aaggatttgg caggcaagat gcttgctgaa gcggccacat tttaattttc acttttaggt
     6061 catcgtgggt aatttgtagc aagatgacct aatttttacc agctagccta ctaactaaat
     6121 ttctactata tttaaatagt cagaaaattt acacaaaatc tgttaataag atattatatt
     6181 gtcagtaata ttttttccta tttattgtga ttcctgccta cattcctctt cgctctttcg
     6241 gtatacgtaa aattccgaat attacgcaat ttctaccgga atattcactt aacaaaaccg
     6301 tattcaacgc ccaaaccatc attggctggg gcttacgccc gaccacccac caagcacgtg
     6361 cttttgcaca atcacatggc ttgccgtttg tagccttgga agacggtttt ttacgctcac
     6421 tgggcttagg cgtggccggt tatccgccct tcgcactggt ttacgacgat atcggcatct
     6481 attacgacac aacccgccca tcgcgtttgg agcagttgat tttagccgca aacatgccgt
     6541 ctgaaatgct taaccaagcg cagcaggcca ttgatttgat tttgacgcac cgtttgtcta
     6601 aatataacca tgctctggat ttttcagacg gcctcgtaca agacagcaaa aacattgttt
     6661 tggtaattga tcaaactttc ggcgatatgg cgattcaata tggcggcgca gatgaagcca
     6721 cattccgcca aatgtttcag acggccttag ccgaaaatcc tgatgcggaa atctgggtca
     6781 aaacccatcc cgatgtattg agcggcaaga aacagggtta ccttactgat ttggcacagc
     6841 agccgcgtgt gcgtttattg gctgaagaca ttaatccgat ttcgctgctg caagcggtgg
     6901 acaaagtgta ttgcgtgacc tcgcaaatgg gttttgaagc cttgttgtgc ggcaagcctt
     6961 tggtaacgtt tggtttgccg tggtatgccg gctggggtgt aagcgacgac cgccatcctg
     7021 aaatcaaccg ccttgttcaa acccaacgcc gcgccacccg caacttgctg cagctcttcg
     7081 ccgcagccta tctgcaatac agccgctacc tcaaccccaa taccggcgaa gcaggcagcc
     7141 tctttgatgt catcgactat ctggcgacgg tcaaacgtaa aaacgacaaa ttgcgtggcg
     7201 agttatattg cgtcggtatg tctttgtgga aacgcgcggt tgccaaaccg ttctttaacg
     7261 taccctcttg ccgtctgaaa tttatctctt ccacccaaaa actggcaagg gtcaaactgt
     7321 ccgacgatgc acgcatcctg gcttggggca acggcaaaga ggccatcgtc cgctttgccg
     7381 aacaacacca catccccctg ctgcgcatgg aagacggctt tatccgctcg gtcggactcg
     7441 gctccaactt agtgccgccg ctgtcgctcg ttaccgacga tatgagcatt tatttcaatg
     7501 ccgaaacccc gtcccgtctt gaatacatcc tacaaaacca aaacttcgac gatcaagact
     7561 ttcagacggc cttgaagctg caaaaaatgc tgaccgaaaa ccacatcagt aaatacaacg
     7621 tcggcagctc agacttcacc gccccgtcaa ccgacaaaac cgtgatcctc gttcccggcc
     7681 aggttgaaga tgatgcgtct atccgctacg gttcacccaa aatctatcgc aatctggatc
     7741 tgctccgtac cgtacgcgaa cgcaatccag atgcctatat catctacaaa ccgcatcccg
     7801 atgtagtcag cggtaaccgc atcggccata tttcccctga agatgctgca cgatatgccg
     7861 accaaaccgc cgagcaaacc gacatcctga cctgtctcca atacgcagac gaagtacata
     7921 ccatgacttc gctgaccggt tttgaagcct tgttgcgcgg caaaaaagtc agctgctacg
     7981 gcctgccttt ttacgcaggc tggggactta cccaagatct gctccccatc ccgcgccgta
     8041 gccgcagact tgagctttgg cagctgattg ccggcacgct catccactat cccgactaca
     8101 tccaccccga aacccatcag gccataaatg cagaaaccgc agcccaaatc ctgatacgac
     8161 aaaaaaatat gcaaaaaaac aacaacggat tacatcgcgg gtgctttgcc aaaaaattag
     8221 gtaaaatcaa acaactatat cgatctttca aataaatacc atcaaagtta acgatgcgtc
     8281 ataaacttgc ctctattgcg gcatcattgc ctttgcatcg ttaattctct tggcgtatgc
     8341 ttgaaagttc aacctaaaac tattacataa aaaacaaaac cacattgcaa catgaaacag
     8401 accgtcctca aaaataacct gcaaaacctg cttgaaagcg cagaaaatat cctgctgctt
     8461 caaggccctg tcggcgattt ttttctgcgc cttgccgact ggctgactgc aaacggcaaa
     8521 accgtacata aattcaactt taatgcaggc gacgactatt tttatccgcc cactcaagcg
     8581 cataccgttg tttttaacga caactacgat gcctttcctg agtttttgca agaatacatc
     8641 actcaacatc acatccaggc cgttgtctgc tttggcgaca cacgccctta tcacgtcatt
     8701 gcaaaacgca ttgcaaacga aaaccaagcc agtttctggg cgtttgaaga aggctatttc
     8761 cgcccctact acatcacctt agaaaaagac ggcgtcaacg cattttcccc gttgccgcgc
     8821 cgtgccgact tttttcttga acaattccct aagcttgccc agcaagaata taaagcgcca
     8881 acgccggtac acggcggttt tacgcccatg gcaaaaaacg ctatccgtta ctatatcgag
     8941 ttgttccgca atccacgcaa ataccccgac tacatccacc accgcgcacc caatgccggc
     9001 cattacctca aaccgtggtc gctctccatc ctcaagcgtt tgaactacta tattgaagac
     9061 atccaaatcg ccaaacgtgt ggaagcaggc aaatacggca agttttttat tgttccctta
     9121 caggtattca acgacagcca agtccgtatc cattgcgact ttcccagcgt ccgcagcttc
     9181 ctgctccatg ttttgagttc atttgccgag cacgcgcctg ccgataccaa catcatcatc
     9241 aagcatcatc ctatggaccg cggctttatc gactactggc gcgacattaa acgctttatc
     9301 aaagaacacc ccgaactcaa aggccgtgtg atttatgtcc atgatgtccc cctgcccgtt
     9361 ttcctgcgcc acggtctcgg catggttacc atcaacagca ccagcggcct gtccggactg
     9421 attcacaata tgccagttaa ggttctcggc cgtgcctatt atgatattcc cggcattact
     9481 gaccaaaata ccttggcaga attttggaat catccgacac cgcctgacaa agagctgttc
     9541 catgcctacc gaatgtacca cctcaacgtg acccaaatta acggcaactt ctacagtcag
     9601 gtcttttttc ctaacaaaaa cacatccgac tcttccacac caacaaccta acttggcgaa
     9661 agaaaagctc aggccgtctg aaaacatttc agacggcctg aaacaatcaa taccttagct
     9721 actgccatgt aaataaaaca caaaaatctg catttatcat taacaataaa ttacaaaaac
     9781 agtataatga ccgagctgcc atgagcgcat accgactcaa cctgagccct ttgtaacaca
     9841 caaaatatgg atatatccct aggcaaaaca atataacaag ccaaacatcc taaagataag
     9901 ccggcaaggc aatacactct ataaaactgt gccgagcaaa atttttacaa agccctcaac
     9961 cggtatcgcc gcccatatgc cgcagcatcc gtcttccact ttatatccgc ccgcaaacca
    10021 tgaccgccgc tcctgatatc ctctaccggc aagccgccgc ccttttggaa caatccaata
    10081 ccgcccaagc cctgcccctg ttgcaacagg cggcagagca aggttatgcg gaagctgctt
    10141 tcgtattggg caaccatctg ctgcaaaacg gccaaccgga gcaggcactt tcatggttgg
    10201 aagccgccgc ggcccaacgc catcccaaag cactcttctc cctgctgcaa caacgcgaac
    10261 acaacggcac cccgaccgga cagcttctca acgactatgc ctggctgggt gagcaggggc
    10321 actcagaagc ccaattaatc ctcatgcgtt accacgcgca acgcaacgat ccacaatcgc
    10381 tctactgggc ggaacttgct gccgcccgat atgccgcacc tgcgtattac catctggcac
    10441 gccatcatca acgccaaggc gacgttgaaa cagccatcga acaatacgaa aaagcggcag
    10501 cactcggcgt aactgccgcc tgctggcaac ttggtcaaat ctacttctac ggtacaggtg
    10561 tcagccccaa ccacgcacaa gccgaacact atctcgaacc agccgcacaa gccggccaca
    10621 tcgccgcaca aacgctgctg gctgaccttc ttgccgccca acgcaaacct gaagccttgg
    10681 aatggtatcg tcgtgccgcc gataaggaac aagcggaagc acagtctaag ctggcccaat
    10741 acgccctgac cggcgaactt tccgaacgcg atccgttcca agcggcacga tatgccaaag
    10801 ccgctgccga gaaaaaccat cctgaagccc tgaaaatcat gggcgacctc taccgctacg
    10861 gtctcggtat caaagccgac aaccatatcg cgcaagatta ctaccaccgt gccgccgcgc
    10921 tgggttctgc cgccgcagca caaaaactca tcagcgacgc cgcgctgtac catccgcaac
    10981 aatacgaaca aatcaaaact gccgccctgc aacaacaaca aaccgaaacc atctaccgtt
    11041 tggcggaagc acaagcctgc gccatcggcc gtcccgccga ctataatgcc gcacgcaaaa
    11101 attacatgga agctgctgag ttccaccata aaaacgcggc ggctgcctta ggccgcatct
    11161 accattacgg cctcggtacg gcgcaagatc ctcgggcggc tgcacactgg tacgccatcg
    11221 ctgccgaaca aaaccaccct tccgcccaat accacctcgc ctgtttttac tatcacggac
    11281 aaggtgtcgg ctgtcatgtt ccgaccgcct gctactggct gcaggctgcc atcagcaacg
    11341 gccacacttc ggccgaatca ttaatatccc tattagaaca atggcgacgc gaagcacacc
    11401 atgccatcgg acaaaaggcc gtctgaaaag atttacactc gcattttttg acaatcttta
    11461 actattcccc taatatttgc cagttatttt tcacggacac gccattgttt tcatttcttt
    11521 ctgaaaacac cttgtccgcg catcaatacc atgacactcg gcggataacg ccaagcgttg
    11581 aaacacacta catccggaac aaaaacggat gctcggaaaa atatttctag gaggtgaaac
    11641 aacatggaat gggaattcaa cagttattac acactgattg ccgccacgct cgtgttgctg
    11701 gttggtaaat ttctggttca aaaaatcaaa ttcttacgag acttcaatat tcccgagccg
    11761 gtcgctggcg gtttggttgc cgcgattatc ctgtttgcgc tgcacgaggc gtacggcgtg
    11821 agcttcaaat ttgagaaacc gctgcaaaat gcgtttatgc tgattttctt cacgtccatc
    11881 ggcttgagcg cggatttttc ccgtttgaag gcgggcggtt tgccgctagt ggtttttacc
    11941 gcgattgtgg gcggatttat cttggtgcaa aactttgtcg gggtcggact ggctacggct
    12001 ttgggtttgg acccgctcat cggtctgatt accggttcgg tgtcgctgac gggcggacac
    12061 ggtacgtcag gtgcgtgggg acctaatttt gaaacgcaat acggcttggt cggcgcaacc
    12121 ggtttgggta ttgcatcggc tactttcggg ctggtgttcg gcggcctgat cggtgggccg
    12181 gttgcgcgcc gcctgatcaa caaaatgggc cgcaaaccgg ttgaaaacaa aaaacaggat
    12241 caggacgaca acgcggacga cgtgttcgag caggcaaaac gcacccgcct gattacggcg
    12301 gaatctgccg ttgaaacgct tgccatgttt gccgcgtgtt tggcgtttgc cgagattatg
    12361 gacggcttcg acaaagaata tctgttcgac ctgcccaaat tcgtgtggtg tctgtttggc
    12421 ggcgtggtca tccgcaacat cctcactgcc gcattcaagg tcaatatgtt cgaccgcgcc
    12481 atcgatgtgt tcggcaatgc ttcgctttcg cttttcttgg caatggcgtt gctgaatttg
    12541 aaactgtggg agctgaccgg tttggcgggg cctgtaaccg tgattcttgc cgtacaaacc
    12601 gtggtgatgg ttttgtacgc gacttttgtt acctatgtct ttatggggcg cgactatgat
    12661 gcggcagtat tggctgccgg ccattgcggt ttcggcttgg gtgcaacgcc gacggcggtg
    12721 gcaaatatgc agtccgtcac gcatactttc ggcgcgtcgc ataaggcgtt tttgattgtg
    12781 cctatggtcg gcgcgttctt cgtcgatttg attaatgccg cgattctcac cggttttgtg
    12841 aatttcttta aaggctgatt ttccgccttt ccgacaaagc acctgcaagg tttaccgcct
    12901 gcaggtgctt ttgctatgat agccgctatc ggtctgcacc gtttggaagg aacatcatgt
    12961 atcggaaact cattgcgctg ccgtttgccc tgctgcttgc cgcttgcggc agggaagaac
    13021 cgcccaaggc attggaatgc gccaaccccg ccgtgttgca aggcatacgc ggcaatattc
    13081 aggaaacgct cacgcaggaa gcgcgttctt tcgcgcgcga agacggcagg cagtttgtcg
    13141 atgccgacaa aattatcgcc gccgcctacg gtttggcgtt ttctttggaa cacgcttcgg
    13201 aaacgcagga aggcgggcgc acgttctgta tcgccgattt gaacattacc gtgccgtctg
    13261 aaacgcttgc cgatgccaag gcaaacagcc ccctgctgta cggggaaacc gctttgtcgg
    13321 atattgtgcg gcagaagacg ggcggcaatg tcgagtttaa agacggcgta ttgacggcag
    13381 ccgtccgctt cctacccgtc aaagacggtc agacggcatt tgtcgacaac acggtcggta
    13441 tggcggcgca aacgctgtct gccgcgttgc tgccttacgg cgtgaagagc atcgtgatga
    13501 tagacggcaa ggcggtgaaa aaagaagacg cggtcaggat tttgagcgga aaagcccgtg
    13561 aagaagaacc gtccaaaccc acgcccgaag acattttgga gcacaatgcc gccggcggcg
    13621 atgcgggcgt accccaagcc gcagaaggcg cgcccgaacc ggaaatcctg catcctgacg
    13681 acggcgagcg tgccgatacc gttaccgtat cacggggaga agtggaagag gcgcgcgtac
    13741 aaaaccagcg tgcggaatcc gaaattacca aactttgggg aggactcgat accgacgtgc
    13801 aaaaagagtt ggtcggcgaa caacgcaagt gggcgcagga aaaaatcagc aactgccgac
    13861 aagccgccgc gcaggcagac cggcaggaat acgccgaata cctcaaattg cagtgcgaca
    13921 cgcggatgac gcgcgaacgg atacagtatc ttcgcggcta ttccatcgat taggggcaaa
    13981 ccgatgaata ccgtcccaaa aagcaggatt cccgtcaaac cgctgcccga aaaaaccaca
    14041 gacgaagcca aagtcgaaaa atggcggcag ctcggtgcgg aacacggttt gtcgggcgaa
    14101 tgggcagttg ccgccagatt gggcgaaaac ggttttaccg aagaacagat ggaaaatatc
    14161 gccaacctgt tcggcagata aagggaaaat tgacggaaat gccgtctgaa accctgttat
    14221 cggtttcaga cggcattttg accaatacgg tacgcaggcg caaaacagcc gtcttttcct
    14281 gcgtttccta tgctgatgtt tcaacacaca agacggcaca taaagcgttg ccctatgtgc
    14341 cgtcctgatt cggaaggggt tacgcccctc
//
LOCUS       DAWGBY010000040        14303 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.040, whole genome shotgun sequence.
ACCESSION   DAWGBY010000040 DAWGBY010000000
VERSION     DAWGBY010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14303
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.040"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(111..539)
                     /locus_tag="WHG62_001041"
     CDS             complement(111..539)
                     /locus_tag="WHG62_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ1725166.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(604..2352)
                     /locus_tag="WHG62_001042"
     CDS             complement(604..2352)
                     /locus_tag="WHG62_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ1725167.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQNY
                     LFLLHVGDHIYGGLEHADSTALLADRHSLPPFAMTDADDAYTTLLGLFSHEYFHSWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     IQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTIMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNTDHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2679..4112
                     /gene="ccoN"
                     /locus_tag="WHG62_001043"
     CDS             2679..4112
                     /gene="ccoN"
                     /locus_tag="WHG62_001043"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ1725168.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYMIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4139..4750
                     /gene="ccoO"
                     /locus_tag="WHG62_001044"
     CDS             4139..4750
                     /gene="ccoO"
                     /locus_tag="WHG62_001044"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ1725169.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4755..4925
                     /locus_tag="WHG62_001045"
     CDS             4755..4925
                     /locus_tag="WHG62_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ1725170.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4949..6046
                     /gene="ccoP"
                     /locus_tag="WHG62_001046"
     CDS             4949..6046
                     /gene="ccoP"
                     /locus_tag="WHG62_001046"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ1725171.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPTPAPAAEPAASAPA
                     EAAQAASEAKPAAAEPKAEEKAAPAAKADGK"
     gene            6159..6284
                     /locus_tag="WHG62_001047"
     CDS             6159..6284
                     /locus_tag="WHG62_001047"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ1725172.1"
                     /translation="MHKHAIEGFNTMPAKGGRGDLSDDEVKAAVDYMVNQSGGKF"
     gene            6486..7895
                     /locus_tag="WHG62_001048"
     CDS             6486..7895
                     /locus_tag="WHG62_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ1725173.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7997..11206
                     /gene="recC"
                     /locus_tag="WHG62_001049"
     CDS             7997..11206
                     /gene="recC"
                     /locus_tag="WHG62_001049"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ1725174.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVGTDDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTAMFGRFAAFLETLSDIVRIWRQPATVDEWVGRCRGLLETLFQAEADDQKAVQNLE
                     NEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPQPFFDQSVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHAEQIAEIYIEARREGQDFSQTAARIGAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLPYAIPSDGQILKGSLSNLYQCGQVFYAY
                     GKPNAPQRVAFLLEHLIFCAVMPSETETRQTFIVQSGETEILVEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYHGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKKEETGEA"
     gene            complement(11274..12842)
                     /gene="mtrF"
                     /locus_tag="WHG62_001050"
     CDS             complement(11274..12842)
                     /gene="mtrF"
                     /locus_tag="WHG62_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ1725175.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13176..13388
                     /locus_tag="WHG62_001051"
     CDS             13176..13388
                     /locus_tag="WHG62_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725176.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENIHAMIGEIKNAI"
     gene            complement(13481..14113)
                     /gene="mtrR"
                     /locus_tag="WHG62_001052"
     CDS             complement(13481..14113)
                     /gene="mtrR"
                     /locus_tag="WHG62_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HEZ1725177.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAFIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWLSSGENFDLGKTAPRIIGIMMDNLENHPCLRRK"
BASE COUNT         3564 a         3391 c         3800 g         3548 t
ORIGIN      
        1 cactgtaaaa acggagaagg acagaggacg gcagtaaggt ttgccgtcct ctttttcaag
       61 ttgcggtgga atgccgcttg aaggtgtggt ttaaacgttt cggcttgtaa tcagacgcgg
      121 gcgttgtcca gccgctctct gaagttttcc aaatttacgc ctgccgcttg ggcgcggcgg
      181 atgatttcgt caaccggcat accttctgcc gcccggcgga agccccacag gagggagcag
      241 cgcgtaccgg tccggcaata ggcaaggacg ggatattcgg cttgtccgat gagttggcgg
      301 aaggtttcga catcgtgttt ttggatgtcg cgtgcggtaa cgggttggtg atggaatcca
      361 gtaacgcctg cttgttccag ccactgtttg atttgggcga agtcgggttg cgattcttct
      421 tcgcggtcgg ggcggttgca gatgacggtt ttgatgccca gttgcgcgat ttgttccgca
      481 tcggctttgg tcagttgcgg agaaatatag aggtgttcgt caagtttcag aatggccatt
      541 ttgtttcctt tactttgcgg ttgtttttca gacggcattt tgtgtgcaat gccgtctgaa
      601 agtttaaccg aacaaccagt tgtccaacag gttccggtct gtgatatgta ggatggcagt
      661 atccgctgcc gctgcctgaa ccgtcaagac ggtttgacgc aatatgccgg cacggaagaa
      721 gtggatattg atttttgcat tgacgtggta tcgggcccat tgtgcggtaa agtcggtgca
      781 ggcataaccg tctaaagcaa tgattttgtc ttgcgggcac agtgccgcag attccgcgct
      841 gccgccgttg aagacatggg tcaggacgat gtggtcggtg ttttgtttga aacgtgcgcc
      901 aaaatcgcct gccgacggga cggggcagat gtgttctgcg tatccgccgc cgtgttgtcg
      961 gggaagcggc aggaaggtca gtcccacgcc tgcggttgcc aggcattcgg caagcggcaa
     1021 atcttcggta ctgtataacg ctttttggaa aaaatcttcc aaatccaagc cggtaatttc
     1081 ctgacagcgg atttgccagt gtttttccgg aatacccgag tgtgtgtccc tccactcccg
     1141 atagagtttg tccattatcg tatcgagaga atgtctgccg ttgcttcggt tgcgtattat
     1201 cagatcaagg cacaatgcgg caagcgcgcc tttctggtag tagctgacga tggcgttggg
     1261 gctgttttca tccggtttgt aaaatttgtt ccacgcggta aaactcgatt ccgccaaggt
     1321 ctgcctcaaa cggccgcggg tttgttgtat gcgcgtaatg ccttgtgcca gcaggtttaa
     1381 ataagattcg ggcgagatgg tgcggctgcg tgccaaaaac aaatcgtcgt aataggatgt
     1441 aatgccttcg aatgcccata gttgttcggt atagttttct ttgtcgaggt cataaggggc
     1501 gaacgcggca ggtttgatgg atttgacgtt ccacgagtga aaatattcat gggagaaaag
     1561 tccgagcaat gtggtgtagg catcgtcggc atcggtcata gcgaacggcg gaaggctgtg
     1621 gcggtcggcg agcagggcgg tgctgtcggc gtgttccaaa ccgccgtaaa tatggtcgcc
     1681 gacgtggagc aggaacaaat aattttgaaa cggggcaggg gaggaaaaca ccgccagttc
     1741 tgtttcgcag atttttttga tatccgaaac cagcctgttg cggtcgaaat cgggatagat
     1801 gccgcttaag gcaattgtgt gcggaatgcc tgccgcctca aaatctaaaa attcaatcaa
     1861 gcccatctcg acaggtcggt caatcaattc ggcataagat gccgcctgaa agacaaacct
     1921 ccctgtttcc ggcagcgttg tggcaatacg ccattcggac ggaatacccg tcaattccaa
     1981 gcggtgcggc agcgtttccg ttccttcgac tttcaaaaac aggcacgatc cgtcaaaaaa
     2041 accgcgttct gtcgtcagga aagaacctcg aaccgacaaa tcgaatgcat atacggtgta
     2101 gcggatttgc cactcgccgc gtacggcggc agcgtgccag cggttttttg caatttgttc
     2161 gagcggcatg gacgtgccgt tacaggatgc atggatagaa gtgatgtggc gggaaaaatc
     2221 ccgaatcaga tagctgcccg gaacccagtt tggcaggctt atttctatag gaagatcatc
     2281 atcttgtgtg aatgtcagca ggatgtgcca ctcgtggtcg agaggggacg gggttatttt
     2341 ataatgaatc ataactatca aatatatcgt taaacgggat ggattaaata cctttaaaat
     2401 gcagcttaac ctacatcaat aaagtgccac aaaaagggaa aattggaaac aaaagcaatg
     2461 gcggtcgggt tgtaatttat tataacaata tgatttatat gtaataaaaa acagattaag
     2521 caaagggctc gtcggcggcg cgaatgtaat tccgcttggc gtaataaggc agatatgtta
     2581 aatttagaaa aaattacgct tgcccggatt gcaccttaaa caggctgcgg aagcggcagg
     2641 ataaaaatct ttattcccat aaattcatgg agactctcat ggacacacaa acttacaact
     2701 acaaagtggt gcgccagttc gccatcatga ctgtagtttg ggggattgtg ggtatgttgg
     2761 tcggcgttat cgtcgccgcc cagctttttg ctcctgccct cgacttgtct aatatcggac
     2821 cttggttcca cttcggccgc ctgcgtccgc tgcacaccaa tgcggttatt ttcgcatttg
     2881 gcggttgcgg cctgatcggc acatcatact acgttgtcca acgtacttgt aatacccgtc
     2941 ttttcggcgg ttggctgccg gcatttacct tttggggctg gcaggcggta atcgttgccg
     3001 ccgtcgtcag cttccctatg ggttggaccc aaggtaagga atatgccgaa ctggaatggc
     3061 cgatcgatat tctgattact ttggtttggg tggcttacgc catcgtattc ttcggtacga
     3121 ttgccaaacg taagattaaa catatttacg ttgccaactg gttctacggc ggctttattt
     3181 tggcggtcgc acttttacac atcgtcaaca atatcagcat cccggcaggg ttgatgaagt
     3241 cataccccgt ctattccggt gcgattgatg ctatggttca atggtggtac gggcataacg
     3301 ccgtgggctt cttcctgact gccggcttct tgggtatgat gtactatttc gtacccaaac
     3361 aagcagcccg ccccgtttac tcctaccgcc tgtccgtcgt tcacttctgg gcgttgattt
     3421 ttacctatat gtgggcgggt ccgcaccatc ttcactacac tgcgctgcct gactggacgc
     3481 aatctttggg tatggttctg tctttgattc tgttcgcacc ctcttggggt ggtatgatta
     3541 acggcatcat gaccttgtcc ggcgcgtggg acaaactgcg tacagacccg attcttaaat
     3601 tcctgattgt atccttgtcc ttctacggta tgtctacctt tgaaggcccg atgatgtcga
     3661 ttaaaacggt caatgcattg agccactata cggactggac cgtcgcgcac gttcatgcgg
     3721 gtgcgttggg ctgggtaggc tttgtaacca tcggttccgt ctattacatg attccccgtc
     3781 tgttcggcaa agaacagatg cacagcacca agctggtaga agcgcatttt tggattgcga
     3841 ccatcggcgt ggttctgtat atcgctgcca tgtggattgc cggtgtgatg cagggtttga
     3901 tgtggagttc tttgaacgat gacggtacgc tgacctactc gtttgtcgaa tccgtaaaac
     3961 gcaccatgcc ttactacatg atccgttttg caggtggttt attgtatctg agtggtatgt
     4021 gcattatggc gtacaacgtg taccgcacag ccatcggtgg taaagcagtc gatgccgaaa
     4081 tccctgcggt ttcccaaaca cagcaccact aaaatactaa gaaagatagg ctaccaaaat
     4141 gaaattacaa caattggctg aagaaaaaat cggcgttctg attgtgttca cgctgcttgt
     4201 agtcagtgtc ggtctgttga ttgaagttgt gcccttggcc tttaccaagg cggcaacaca
     4261 gccggcgccg ggcgtgaagc cttacaatgc cctgcaggtt gccggacgcg atatttacat
     4321 ccgtgagggc tgttacaact gccactcgca aatgattcgt ccgttccgtg cggaaaccga
     4381 gcgttacggt cattactctg ttgccggaga gtcggtttac gaccatcctt tccaatgggg
     4441 ttccaaacgt accggtcctg atttggcacg tgtgggcggt cgctattccg acgaatggca
     4501 ccgtatccac ctgctgaatc cccgtgatgt cgtgcctgag tccaatatgc cggcatttcc
     4561 gtggcttgca cgcaataaag tcgatgtcga tgcaaccgtt gccaacatga aggctttgcg
     4621 taaagtaggt actccttaca gtgatgagga aattgcgaaa gcgcctgagg ctttggcaaa
     4681 caaatccgag ctggatgctg tagtcgccta tctgcaagga ttgggtctgg ctttgaaaaa
     4741 cgtaaggtaa catcatggat attaacggta ttcgtgctct cttcacggta tggatcttta
     4801 tctgtttcct gttggtactc tatatcgtct tcaacaggcg gaataagaaa aactacgata
     4861 atgccgcaaa cagcattttt gatgaaaacc aagatgcgca agataagaaa agcgaaaacc
     4921 gttaatattg tgataacgga gcaaaacaat gaacacaaca tcccaattta ccagtaattt
     4981 ctggaatata tatattgcag ttattgtctt actgagcttt atcgctttgg cttggctgct
     5041 gctgtctcaa aatgttgtca aacgtccgaa gaagggcgaa gaagtacaaa ctacgggtca
     5101 tgagtgggac ggcattgccg aatacgacaa tccgctgccc cgctggtggt tttggctgtg
     5161 tgttttgacg tggctgttcg gtatcggtta tctggttatg tatccgggtg tcggcgacta
     5221 caaaggtctg ctgaaatgga ccagccataa ccaatatgaa aaagaggtca aaaaagccga
     5281 tgagcaatac ggcaaactgt atgccaagtt tgcggatatg ccgattgaaa aagtggcaaa
     5341 agaccctcaa gccaagcaaa tcgcccaaaa cctgtttaac acttattgta tccagtgcca
     5401 cggctctgat gctaaaggct ctaaaggttt tccgaatctg accgatagcg attggttgtg
     5461 gggcggtgat cccgataaaa tccacgagac catcgaaaaa ggccgtgttg cgactatgcc
     5521 tgcctggggc cctgctttgg gcgaagaagg cgtgaaagac gttgcccatt atgtgatgtc
     5581 cctttcaaaa cccgaaggtc agtatgatga ggaacgtgcc gcgcgcggac aagccttgtt
     5641 cagcggtccg cctgccaact gtttcacttg ccacggcgat aagggacaag gtatccaagg
     5701 tttgggtccg aacctgactg atgacgtgtg gttgtggggc ggtacgcaaa aatccattat
     5761 cgaaaccatt accaacggtc gcagcagcca aatgcccgct tggggacatt tcttggataa
     5821 agacaaactg catattatga ctgcttatgt atggggtctt tccgataaag acggtaaagc
     5881 tccggtgaaa aaagccgagc ctgcaccgac tcccgcaccg gcggcagaac ccgcagcctc
     5941 tgctcctgca gaagcagcac aagccgcgtc cgaagccaaa cctgccgcag cagaacctaa
     6001 agccgaggaa aaagccgcac ctgctgccaa agcggacggc aaataggttt atgaaaccgt
     6061 ttgtgccgcc tgccatggca atgcggttcc gggtattccc catgtaggca tcaaagccga
     6121 ttgggccgac cgcatcaaaa aaggcaagga cacgttcgtt gcacaaacac gcgatcgaag
     6181 gtttcaatac gatgcccgca aaaggcggtc gcggcgattt gagcgatgat gaagtgaaag
     6241 ctgcggttga ctatatggtc aaccagtcag gcggcaaatt ctaacttgac tgagtttccg
     6301 atattatcgg ttatgaaaat ccagattcag tattgaatct ggattttttg ttttaacggg
     6361 catccggttt taaacgcaga ctgcctattt gttgtaatga attttgactt tagtcataaa
     6421 gaattagtct ttattgttta taatcgcgca tcatcacgat agccctattt tcaaaaggac
     6481 gattaatgga tacacaaatc aaaactgaag ccgacaatca gagcaaccgg cgttatctga
     6541 ccgtttggcg gtggcatttt tatgccggtc tgctggttat gccttttctt accctgcttg
     6601 ccgttacggg tttgggtatg ctgctgtttg ccaatattac cggtaaggag ggcgagcgga
     6661 ttcatgttgt gccgcaggca acggtacaac ctctgtctgt tcaggcggaa gcggcacgca
     6721 gtgccgttaa tccggaaact tcgtccgtcg ttcagtatat tgcgccgcgt gccgatgata
     6781 tggttgccgt gttccgtgtc aacaatgagg gcaaggcaac gatggtcgcg gtcgatcctt
     6841 atacggcaaa agtggtcagt accatgccgc gcaatcaggg ttggtattac gcgatggatg
     6901 aaatccacag cgatatgatg ctcggttcga caggtgatta tcttttggaa acggctgcat
     6961 cgctgacgat tatcatgata atcagcggtt tgtacctttg gtgggtgaaa cggcgcggca
     7021 tcaaggcgat gctgctgccg ccaaaaggca gggcgcgttc ttggtggcgg aatctgcacg
     7081 gcgcgtttgg aacttgggtg tcgttgattt tactgttgtt ctgcctgtcg ggtattgctt
     7141 gggcaggtat ttggggcggc aagttcgtgc aggcttggag tcagttcccg gccggcaaat
     7201 ggggtgtcga accgaaccct gtttcagtcg tgccgaccca cggcgaggta ttgaatgacg
     7261 gcaaggttaa ggaagtgccg tgggttttgg agcttacgcc tatgcctgtt tcagggacga
     7321 ctgtgggcaa agacggtatt aaccctgacg agccgatgac attggaaacc gtcgaccgtt
     7381 ttgcgcggga aatcggtttc aaagggcgtt atcagttgaa tttgcccaaa ggcgaggacg
     7441 gagtgtggac tttgtcccaa gactctatga gttacgatat gattagtccg tttgccgacc
     7501 gcacggtgca tatcgaccag tacagcggca aaatccttgc cgacatccgc tttgacgatt
     7561 acaacccgtt cggcaaattt atggcggcaa gcattgcgct gcatatgggt actttgggct
     7621 ggtggagcgt gttggcgaac gttttgttct gccttgccgt catttttatc ggtatcagcg
     7681 gctgcgtgat gtggtggaaa cgccgtccga ccggagcggt gggcatcgtt ccgccggcgc
     7741 agaaagtcaa gctgccggtt tggtggatga tggcattgcc gctattggca atcgcactgc
     7801 tcttcccgac cgcactgctt gccattgccg tgatttggct gttggatacc ttgctgctgt
     7861 cgcggattcc tgttttgagg agatggttta aatgacccga tgccgtctga agcgttcaga
     7921 cggcattttg tttgaaggcg ggcgggggaa aggctatata atcccgaata cttgaccaca
     7981 gcttctgttt gaaatcatgt tttatctgta tcaatccaac cgtcttgaaa cgctggcggc
     8041 actgtttgcc cgcattcaaa aagtcaaacc gctgaaatcg gttttacagc ccgaacagat
     8101 tattgtgcag agtcagggga tgcgccgcta cctcaatacc tgcctcgccc gcgatttggg
     8161 cgtggcggcg aatttgtcgt tcagcctgcc cgccggtctg acgtggaagc tgatgaaaaa
     8221 actgattccc ggtattccgg aactcagccc gtttgcgcct gaagtgatgc gctggcggct
     8281 gttggatttg ttccgcagcg aggcatttcg gaatacggca gaatttgaag atgtgaggaa
     8341 tgtgctgcaa gactatctag gcagcggcga atcggcagat tatcagcttg cgggacagct
     8401 tgcggacata ttcgaccaat accttgtcta tcgtccgcag tggatagacg cgtggcagca
     8461 gggcaggata ctcagtttgg gcgacgatga aatctggcag tccaaactgt ggcgttatct
     8521 tgatgacggc aggcagagcg cgccgcaccg tgttgcgttg tgggaaaagc tgttggaatc
     8581 tttgagcagt gataagctgc ccgagcgtta tttcgtgttc ggcatttcca cgatggcgcc
     8641 gatgtatttg cagcttttgc acaagctgtc cgaacattgc gatgtgttcg tgtttgcact
     8701 caatccgagt gggatgtatt ggggcaacgt catcgaagcg gcgcaaatcc tcaaaggcgg
     8761 cggcgatccc gatttaactc aggcagggca tccgctgctc gcctcattgg gcaagcaggg
     8821 gcgcgacttt ttcgactttt tgaacgaaat ggaaatagaa ggagaaacgc cggtatttga
     8881 agaaggcggg cgcgatacgc ttttgcacgc cctgcaaacc gatattcaaa acctgaaaat
     8941 gccgtctgaa aatgtgggaa gcgtcggtac ggatgacggt tcgatacgta tcgtctccgc
     9001 gcacagccct ttgcgcgaat tgcagatact caaagacaag ctgttgaaaa ttctgcatga
     9061 acatcccgat tggcagccgc atgatatcgc cgtattaacc ccgaatatcg aatcctatac
     9121 gccttttatc gaggccgtgt tcggacaggc gcagcccggt gcgcaggcat tgccgtattc
     9181 cgtttcggac gtgaaaataa gccgccgaca accgctgttt catgctttgt catgcctgtt
     9241 cgacttgttg gaaagccgat ttgaagtcga taaagtgctt gtgcttttag aaaccgcacc
     9301 cgtgttgcgc cgtttcggac tgactgagga cgatttgccg cttttgcacg acatggttgc
     9361 cgatttgaac gtccgctggg gtttggacgg agaaatgcgc ggcggcacgg atcagctgtt
     9421 tacctggaag caggcggtag aacgcatgat attgggctgg atgctgcccg aaggcggcaa
     9481 tccgatgtgg caggatgtca gcgcgtggta tgccgacgtg aatcaaaccg ccatgttcgg
     9541 acgttttgcc gccttcctcg aaaccctgtc ggatattgta cggatatggc ggcaacctgc
     9601 gacggttgat gaatgggtag gacgttgccg aggtttgctt gaaacattgt tccaagccga
     9661 agccgatgac caaaaggcag tccaaaacct cgaaaacgaa tgggtcaaat ggcaggcgga
     9721 aacagaattg gcgcaatttt ccggacagtt gccgcaacaa accgtcatcc gccatatccg
     9781 acgtttcctc gacagcgaaa gcgaggcagg ctttttacgc ggcggcatca ccttttgcag
     9841 tatggtgccg atgcggagcc tgccgttcaa agtcatctgc ctgttgggtt tgaacgacgg
     9901 agattttccc cgcaatacca aagccgccgt attcgacctg attgccaaac atcccgccaa
     9961 aggcgaccga gcccgtcgcg atgacgaccg ctacctgttc cttgaagctc tcatcagcgc
    10021 gcgtgaaatc ctgtatttgt cctacatcgg gcgcgatatc cgcaaagacg aagagcttgc
    10081 cccgtcttcg ctgttgggcg aactcatcga cacagttgcc gccatgaccg gcacaaacag
    10141 ccgccaactt gcacaaaatt ggatagaaca gcatccgctg caagccttct cgcgccgata
    10201 tttccaagaa ggcggacgtt cagacggcat attcggcacg cgtaccgact acgccgccgc
    10261 gctcggacaa acgcccgaac cgccacaacc ctttttcgac caatccgtag aaaacgccga
    10321 acccgttgcc gaaatcggac aggacgaatt tatccgcttc tggcgcaacc ccgtcaaagt
    10381 atggcttcag cagcagcttg cgtggagcga accccatatc ggcgaagcct gggagcctgc
    10441 cgaacccttc gaaccgcaac atgccgagca aatcgccgaa atctatatcg aggcgcgccg
    10501 cgaaggacaa gatttttctc aaaccgccgc ccgcatcggg gcggaaagcc tgctgccttc
    10561 cggagaattg ggcagacttt ggcagcagga cttccaaacc gctgccaaac aaattgacac
    10621 ggcggtttta aacagtccca aacttcctcc gctgccctac gccataccgt cggacgggca
    10681 aatcctgaaa ggcagtttga gcaatttata ccaatgcgga caagtgtttt acgcctatgg
    10741 caaacccaat gcgccgcaac gtgtggcttt tttgttggaa cacctgatat tttgcgccgt
    10801 tatgccgtct gaaaccgaaa cgcggcaaac ctttatcgtc caatccggag aaaccgaaat
    10861 attggtggaa atcgcgcaag acagggcatt gcagctattg tcggaatgga tggcgttttt
    10921 caatatcggg caaaaccgcc cgctgccgtt ttttgccaaa acctcgcttg ccgccgccga
    10981 agcgtttgcc caaaaacaag attgggaagc cgccctgaaa aaagcccaaa ccgcctacca
    11041 cggcaacaaa gtcagcaaag ggcagaaaga ctataccgaa gtcgccctcg tgttcggcaa
    11101 cgcaagccaa aacccgctcg aacagcccct gtttgaaaac ctcgcccgcc tgcttgccga
    11161 cacgcttgcc gcagcggaaa aaaaggaaga gaccggagaa gcctgacggg atagaaaggc
    11221 aaatgccgtc tgaaagcgtt taagcatttc agacggcatt ttgtttatcg tgtttaaggt
    11281 gcgggataga atgtgggcgc gccgggaccg acgggcaggc ccaaaacaaa tacccaaatg
    11341 cagaataagg caatccatgc aattaagaag aaagcggaat acggcaacat catagaaatc
    11401 agcgtaccca cgcccgcatc ttttttgtat ttgatcaccg tcgccataat cagcccgaaa
    11461 taactcatca tcggcgtaat aatattggta acggaatcac cgatgcggta agcggcttga
    11521 atgacttcgg gcgcgtagcc ggccaacatc agcataggga cgaaaatcgg cgcagttacc
    11581 gcccattgcg cggaggcgga gcctatcatc agattgataa aagcacaaat taaaataaaa
    11641 ccgataaaca acacgctgcc gcccaagccg acttctttta agaacgtcgc ccctttaacg
    11701 gcaatatatt gcccaatatt cgtccaatta aaaaatgcga caaactgtgc ggcaaaaaag
    11761 atgatgacca aataaagccc cagagtactc atcgattcgg ccatcgcatt aacgacttcc
    11821 tgttcgccgc gcaaacttcg ggttacccgg ccataaacaa tgcccggcag tgcaaacaac
    11881 aagaaaataa aaacaacaat tgattttaaa aacggcgaac cggaaaccaa tcctgtttca
    11941 ggatgacgca aaataccgtc ggcagggacg atgctccaag ccaatagggc ggataaggca
    12001 acaaacacca cgccagccca aattaatcct ttatattcca aaggcgtgat ttcattggaa
    12061 tgtcgaatgt ctttttcttc ttgtgacaaa tctgattgat aagggcccaa ttgcggttcg
    12121 acgatttttt cagtaacaaa ataaccaatc aaagcaatca caaacgtact ggctaccata
    12181 aaaaaccagt tggcttcagg gcctacgacg tagtcgggat ggatgatttg cgccgcctgt
    12241 tgggtgatgc ctgccaagag cggatcgatt gtgcctaaga acagattggc cgaataaccg
    12301 cccgaaacgc cggcgaaagc cgcagccaga ccggcaagcg gatggcggcc gagggaatga
    12361 aagatgatgg cggacaaagg gattaggacg acatagccca attcagaagc ggtattagat
    12421 aaaatccctg taaaaacaac cataaaagta gtgagtttgc gtggagattt tgtgagcaat
    12481 aagcgcatta atgcggaaat caagcccgat ttttccgcaa tccccacgcc caataaagaa
    12541 accaacaccg ttcccaacgg cgcgaaaccg gtgaaatttt taacggtatg cgtcaggatt
    12601 ttgatcaaac cgtcagcatc gagcaggctg acaacgtgaa tcaaaccgtc atcggcacgt
    12661 cctttcgcac caacagggcg cggatcgggg acggatagtc cgaaatacgc accggcggca
    12721 gaggcaatca gcaataacac aatgaaaata ataaaaagcg taaccgggtg cggcaacata
    12781 ttgcccagcc attcgactgt gcgtaaaaat cgtccgtccc gttgcgtatc ggtttgactc
    12841 atctgcttct ccttaaaaaa aatatattga gtgcattaaa tttttgaatg taacatgaag
    12901 tgttttgtaa gcaaactaaa ataatcgtat atgtatataa ccgtaataga ttaaaacaga
    12961 aaatgcccac atcgttattc tcataaaggc ggtaatccga aaacttgacg ttaaagcctt
    13021 atcaggaatg actggaactc aaaaaaacgg attcccgcct gcgcgggaat gacgggattt
    13081 tcggtttttg tttgcaagaa tgccggagaa gaacgcagtt tacattttga atggtattgt
    13141 tattaattgt aaataaatat tggaaggtaa atgatatgaa aaatgaaatt caaaaaatca
    13201 tggacaaata taatccatgg catgaagatg attttgagtc gtatgaagac attgccaaag
    13261 atgtatcgct gatgacagat aaaacgttca ttgaacatta tttgttagaa gtttattcag
    13321 aagaaaacgg acattttgac caagagaata tccatgcgat gataggggaa attaaaaatg
    13381 caatttagtg aatatgtatt tttagaagaa ggctttgtgt tattttgatg ccgtctgaaa
    13441 gggtttgtcc gtttcagacg gcattgttac aaagcttgga ttatttccgg cgcaggcagg
    13501 gatggttttc caagttgtcc atcattatcc cgatgatgcg cggggcggtt ttgcccaaat
    13561 cgaaattttc tccggaagaa agccaacgcc aaatcagccc gtccaaggtt gatttgatga
    13621 agatgaccgc cgtttccttg tccaaatcgt cagccaaatc ctgattttcc accgcttcgg
    13681 tcaaaacggc ggtaattttc tcgcgccaga ttgcctgatg cttgcgggca atggcgataa
    13741 aggcggcgtt ttgctccgtg tgttcgcatt ttaaaaacag gatgttgtgg aatttgtagt
    13801 agatgtcgtt gctttgcagc cgctcgaaaa agtgcagcag cgtgtggcgg aataccgccc
    13861 aagaccctcc ttcggcatct tcggcatctt gcgcgatgca gttttcgatg tcgtcgcaga
    13921 tacgttggaa cagcgcgtcg aacaagtctt ccttattttt gaaatgccaa tagagcgcgc
    13981 cgcgcgttac gccggcggct tgggcgattt cgttgagcga ggtgcgcgca atccctttgc
    14041 ggtaaaaggt ttccaaggcg gcaagcatca ggtgttcttt ggttttcaag gcttcggttt
    14101 tggtttttct cataatggcg ttttcgtttc gggtcggttt gatgagggcg gattataaaa
    14161 aagactttgt aaccatgcaa tcgtgtatgt ataatgaaac ccatgaaatt gagactacat
    14221 ctcaactttg aaaacaggca taacctgctt cgcaacccgt ttgaacatcg ggttggcgaa
    14281 gcaggcggtt tttatatcct gaa
//
LOCUS       DAWGBY010000041        14267 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.041, whole genome shotgun sequence.
ACCESSION   DAWGBY010000041 DAWGBY010000000
VERSION     DAWGBY010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14267
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.041"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            84..1095
                     /locus_tag="WHG62_001053"
                     /pseudo
     CDS             84..1095
                     /locus_tag="WHG62_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1312..2649
                     /gene="ribB"
                     /locus_tag="WHG62_001054"
     CDS             1312..2649
                     /gene="ribB"
                     /locus_tag="WHG62_001054"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ1725178.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHKLKIGTIT
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPAADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2809..2946)
                     /locus_tag="WHG62_001055"
     CDS             complement(2809..2946)
                     /locus_tag="WHG62_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ1725179.1"
                     /translation="MKPVKLKMPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYR
                     K"
     gene            complement(2957..4558)
                     /locus_tag="WHG62_001056"
     CDS             complement(2957..4558)
                     /locus_tag="WHG62_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ1725180.1"
                     /translation="MTEQHFTEQIKSLIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKQIRKENPDEAIEFINMDIEGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAAHNAELFSVKTEGGAKIVLFERISQYITDEGRRDDFCRALISKLAGFSFEA
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMADILVPEEVRGQIRSVD
                     VYDPSAGSGTLLMNVAHAIGEDKCMIYTQDISQKSSNLLRLNLILNNLVHSLNNVVQG
                     NTILSPAHKDASGRLKKFDFIVSNPPFKLDFSDFRDQLEGEENRERFFAGIPKIKAKD
                     TDKMEIYQLFIQHILFSLKENGKAAIVLPTGFITAQSGIDKKIREYLVENKMLAGVVS
                     MPSNIFATTGTNVSILFIDKANKDNVVLIDASGLGEKIKDGKNQKTVLSREEEQKICN
                     TFTHKQAVEDFSVVIGYDEIKAKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADL
                     DKLFAESAELEKEIKDRLAMLKFNS"
     gene            complement(4625..5467)
                     /locus_tag="WHG62_001057"
     CDS             complement(4625..5467)
                     /locus_tag="WHG62_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725181.1"
                     /translation="MNFVLAKITCKKDLVKILSDDHIFPDFSYENLNFITYNYDYNLD
                     DDTWFQIENLKNQDFCPKFLDNSNLFDSKMFSEIKKEEINIEKLKYLVSCTNDALFFQ
                     KITSSLLLKKKHLLTICGNGAKLCEPQDLLVIKDIPDAVYIIKDDKLIFRTLSSISSI
                     FKGIEDLYREATNTEVQQFLESDFIDLKEDFLSEKVSIPNRKRIALVQDRLNNMTLDQ
                     RQELLNYLAEYNNNILKFNADGSRVEISTDVQLKHLLYGIDERYYTTALGKEKRLANS
                     VQPI"
     gene            complement(5478..6038)
                     /locus_tag="WHG62_001058"
     CDS             complement(5478..6038)
                     /locus_tag="WHG62_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725182.1"
                     /translation="MDKLFKILLNISSTSLLLSIYFIKSQYYILDLTWFYRVISNHWI
                     EPISKLSLLFYFLIPFIATATVLWLSKYLGKDEFKQGEVKELEYVNDNFLPSYLGYFF
                     VALSIPDNNLFLLFVMYGIIFLLVSCSKSFYFNPVFFLFGYRFYQAKTESGLLLVLIS
                     KQEFRTPQSVSSIAVYRINNFTFLEK"
     gene            complement(6031..7206)
                     /locus_tag="WHG62_001059"
     CDS             complement(6031..7206)
                     /locus_tag="WHG62_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ1725183.1"
                     /translation="MNSALENHATYINNKVDTNEISLSQYISTDNILQNKQGIECATS
                     LPIQGGKVTAFKKGDILLANIRPYLKKIWYAQFDGGCSADVLAIRANAKTDSHFLFYA
                     LFRDDFFIHAMKGAKGTKMPRGDKTQIMEFKIPVFDLKTQQSIAAVLSALDKKIALNK
                     QINARLEEMAKTLYDYWFVQFDFPDANGKPYKSSGGDMVFDETLKREIPKGWGSIELQ
                     SCLAKIPNTTKILNKDIKDFGKYPVVDQSQDFICGFTNDEKSILNPQDAHIIFGDHTR
                     IVKLVNFQYARGADGTQVILSNNERMPNYLFYQIINQIDLSSYGYARHFKFLKEFKII
                     LPSKDISQKYNEIANTFFVKVRNNLKQNHHLTQLRDFLLPMLMNGQVSVRCSGARDG"
     gene            complement(7300..8289)
                     /locus_tag="WHG62_001060"
     CDS             complement(7300..8289)
                     /locus_tag="WHG62_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEZ1725184.1"
                     /translation="MHNNDIIIYTTEDGLSEFTLRELDGELWLTQKEIAELYQTSKQN
                     IGKHIKAIFAEQELDDSVVNFQFTTAADGKNYRMGLYPLSLIIAVGYRVRSTRGTQFR
                     QWATRTLGEYISKGFVLNDDRLKNPPVGTNRAEDQFEQLLNRIRDIRSSERRMYLRVR
                     EIFAMAADYQPSFKETTHFFKIIQNKLHYACTRHTAPEIIYQRADAGKPNMGLTHWRG
                     KEIAKADVTVAKNYLNEKEIDALNRIVSMWLDFAEDQASMKKQIFLQDWTEKLDAFLT
                     FNDRQVLQTAGTISKTQADEKARIEYEKFAAARRLEKEREGERHIAELLSLKK"
     gene            complement(8338..11343)
                     /locus_tag="WHG62_001061"
     CDS             complement(8338..11343)
                     /locus_tag="WHG62_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ1725185.1"
                     /translation="MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNENWDKPTNIFPKI
                     FIESLCRINPDLSPDDARRLLTDIRLELDNEDLGQKFYERLTNQSGGKKLIDFQNFDN
                     NSFHVVTELPCINGDEEFRPDITLLVNGMPLVFIEVKKPNNKGGIGEERERMGKRAKN
                     SKFRRFINITQFMIFSNNMEYDDGATEPAQGAFYASSAYGKPVFNYFREEHKLNLAEL
                     LNTLSDGLENNVLQDNNLPVIKHSPEFISNKSPDTPTNRILTSLLCRERLSFLLQHGL
                     TYVKASQGLVQKHIMRYPQLFATLAIEKHLANGGKKGVIWHTQGSGKTALAYYNTRYL
                     THYYAKQGIVPKFYFIVDRLDLLKQAHQEFTDRNLIVHTINSREAFAADIKSAQTLHN
                     HAGKAEITVVNIQKFKDDPDVVARNDYDLAIQRVYFLDEVHRSYNPKGSFLANLNQSD
                     VNAVKIGLTGTPLIGVTAGNVNTRELFGDYIHKYYYNASIADGYTLRLIREAISSQYK
                     AQLQAALAQLEVEKGSFDRKEIYAHPHFVRPMLDYILDDFAKFRKTNQDDSLGAMVVC
                     DSAEQARQLFEHFQTASNHNLTAALILHDVGTKDERDQWVKDFKAGKTDILFVYNMLL
                     TGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSYRYGYVVDFADIEREFDKTNRAY
                     WDELSNELGDEIGSYSQLFKTAEEIEQEIADIKNALFDFDTENAEEFCCQISQIEDKK
                     QLLTLKKALQTAKELYNILRLQGSHEFLAHLDFDKLNLLYRETAARLDTLNLAEKLQQ
                     GDTAHLLNEALEDVYFQFVKIGEAELKLADDLKDIMRKVREGLAGNFDQGDPEYISLR
                     EELERIFKKKNLAEVGQEEMQANIATLETVYAKIKELNRQNDLLRHKYGGDAKYARTH
                     KRLMENAAFYGDKLKVFNALNGVKTDTDQKVLDMEQILDNQNYFEKQMQGIVLKRFRT
                     EQQFPVQPVDIQAINRLLVREYLKESGRI"
     gene            complement(11457..12767)
                     /locus_tag="WHG62_001062"
     CDS             complement(11457..12767)
                     /locus_tag="WHG62_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ1725186.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPYVENGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYQEFTIEADAQELLVNTADGDARRLLNLLEQLLRSADTR
                     RLKTLTAEFLADGLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRMAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            13079..13462
                     /locus_tag="WHG62_001063"
     CDS             13079..13462
                     /locus_tag="WHG62_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725187.1"
                     /translation="MEWVSLFSDPQKDDDSLITLKDEKITVKNYIVPWWKKGENFRKL
                     ELITTGKNDNGNLTVNGIYGIQSFADPQLGYTPELSVKSNNDILFKNNLQSVDVHPYS
                     GNIHLDAKGKIQFNLKFPMLMGYKM"
     gene            13586..14267
                     /locus_tag="WHG62_001064"
                     /pseudo
     CDS             13586..14267
                     /locus_tag="WHG62_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244588.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
BASE COUNT         3702 a         3214 c         3266 g         4085 t
ORIGIN      
        1 gttacagggt gcggatgcaa acgcattgcg ggtgcgggtt tgaggcatac gcgcaaacat
       61 cttaatataa tggattgata tttatgattt tctccatcat cgtccctatt tacaatgtgg
      121 aaaaatacct ccgctgctgc gtggattccg tgcttgccga aaattttgcc gattatgaaa
      181 tgattttggt cgatgacggt tcgccggacg gctgcgggaa gatttgcgac gaatatgcag
      241 gcaaatatcc gcatataaaa gtgattcatc aagaaaacgg cgggctgtcg gatgcccgca
      301 acgccggtat ccgggcggca aaaggcgatt acctaatctt tttggacagc gacgactatt
      361 gggccgatac caaccgttca aaaaacgcgg ggggggattc tctttgattt acaacaactt
      421 gcagacaaaa aggttgattt gatcctgcat ccctcgtccc tcaattacca cgtcatcccc
      481 aaaggggcgg acttttcgga taatgatttt gtccgccatt ttgaaacgct ggtggagggg
      541 cggtactata tcgccaacgc gtggacaaag attgtcaggc gggaaatcat cattaaaaac
      601 aatctgtttt tcccaaaagg atacattcac gaggatttcc cgtacagttt gcaattggcg
      661 cgttttatca agacttttgc cttttacgat aacccttttt accagtaccg cgttctcggc
      721 ggctctatca gccacaacat caaatacaaa aatttcagcg atgtgctgac gcatctcgac
      781 ctgggtgtgg attttttagt cgaaaacaaa aattccccca tctacggcgg ttggcaaaaa
      841 tttgtcttcg acaatatcgg ctatctgagg tctatattgg taaggcttta tttttccaaa
      901 aacattatcc tcatctaccg gaaatatttt tcatttaaag aaaaatgcag aaagatattc
      961 ggcgcgaaga cgatgcatcc gatttttatc gggaagaccg cattcatcat aggattgccg
     1021 atattgcgcc tgctcgtacc gcctatgctg tacccggcaa tcaaggccgt ttatcagaaa
     1081 tttttttcgg aataagcttc cggcaaaccc cgaatcggaa gcgggcggga agaaacagcc
     1141 gccccgccgg cggggattgc ggcaatgccg tctgaagcca cgaatccggc ttcagacggc
     1201 atctgtttac caaaaagcaa ataattcggt ttgacgaaaa aaaacagatt tgctttttgg
     1261 taaatacgcg attacaatcc gctacatccg atttctacaa aggatgaaac gatgaccgac
     1321 acagccggtc tgcgccgccg caacctgcgg caatggatag cagaacacta cggcggtttg
     1381 caaacccgtt ttgccgaagc cgttgccctc aacacaggcg aactctccgc ccttttgaaa
     1441 aacaaatcct tcggcgagaa aaaagcccgt aaaatcgaac aggcggcaaa aatgcccgcc
     1501 ttctggctcg ataccgaaca caccgcccgc ccgcccgaac acacaggaaa acacaccatg
     1561 tcccatattt cccccatccc cgaaatccta gccgacatca aagccggcaa aatggtcatc
     1621 atcaccgatg ccgaagaccg agaaaacgaa ggcgacctgc tgatggcggc gcaattcgtc
     1681 acgcccgaag ccatcaactt catgatcaaa cacgcgcgcg gcttggtctg cctgccgatg
     1741 gacggcgaaa tggtcgaaaa actcgggctg ccgatgatga cccaaaaaaa cggcgcgcaa
     1801 tacggcacca actttaccgt ctccatcgaa gccgcacacg gcattaccac cggcatttcc
     1861 gccgccgacc gcgccctgac tattcaaacc gccgtttccc cgaccgccaa acccgaagac
     1921 atcgtccaac ccggtcatat ctttccgctt cgcgcccaaa aaggcggcgt actcgtccgc
     1981 gccggacaca ccgaagccgg cgtcgacttg gcgcaaatga acgggctgat tcctgccgcc
     2041 gttatttgcg aaatcatcaa cgacgacggc acgatggcgc gtatgcccga actgatgaag
     2101 tttgccgaag aacacaagct caaaatcggc accattaccg acctcatcga ataccgcagc
     2161 cgtaccgaaa gcctgctcga agacatgggc aacgcacccg tacaaacccc gtggggcgag
     2221 ttccaacaac acgtttacgt cgacaaactc tccggcgaaa cccacctcgc cctcgtcaaa
     2281 ggcacgcccg ccgccgacac cgaaaccctc gtccgcgtcc acgaaccctt cagtgtgatg
     2341 gacttcattc aagccaaccc gcgccattca tggtcattgc ccaaagcact cgagcgcgtc
     2401 caacaggcag aaagcggcgt cgtcatcctt ctgcaccgca ccgaagacgg cgcatccctg
     2461 ctcgaccgca ccctgcctaa aggcgcaaac caagcctaca aatgggacag caaaagctac
     2521 ggcatcggcg cacaaatcct cgccggcctc aacgtcaaaa aactgcgcgt cctcgggcag
     2581 ccctcatctt tcaccggcct gaccggcttc ggtttggaag tcgtcggctt tgaagaagcg
     2641 gaaaaataat atagtaaatt caaatacttt atatttgctt tatttattgc attatttccg
     2701 tgcaaacgaa aacccggtct gttgggttgg attttgtttt ttcaaatttc gggtaacttc
     2761 taattcgtca ttcccgcgca ggcgggaatc cggttcgtcg ggtttttgtc atttccgata
     2821 aattcctgtg gctttggttt tttggattct ctctttcagg gaaagaacgg cataagtatt
     2881 ttccaaacca aacaaaatgc cgtctgaaag gctttcagac ggcattttaa gtttgaccgg
     2941 tttcattcat cggtatttat gaattgaatt tcaacatcgc caatctatcc ttaatctctt
     3001 tttccaattc ggcagattcg gcgaaaagtt tatccaaatc cgctgaaaat cccgccattt
     3061 tttgcgcaaa ttcgtcggcg gaaatatcca cataatcaat ctttacctcg aaatactgcc
     3121 ccgccgacaa gctgtgattc ttcgctttga tttcatcgta gccgatcacc acgctgaaat
     3181 cttccactgc ttgtttgtgc gtgaaagtat tgcagatttt ttgttcttct tcgcgagaaa
     3241 gtacggtttt ttggtttttg ccgtctttga ttttttcgcc caagcccgat gcgtcgatta
     3301 ataccacgtt gtctttattg gctttatcga taaacaggat ggaaacgttg gttcccgtgg
     3361 tggcgaaaat attggaaggc atggaaacca cgccggcgag cattttgttt tctaccagat
     3421 attcgcggat ttttttgtcg atacccgatt gggcggtgat aaagcccgtc ggcaacacaa
     3481 tcgccgcttt gccgttttct ttcaggctaa acaagatatg ctggataaaa agctgataga
     3541 tttccatctt atccgtatct tttgccttga ttttcgggat accggcaaaa aagcgttcgc
     3601 ggttttcctc gccttccagt tggtcgcgga aatcgctgaa atccaattta aacggcggat
     3661 tggaaacaat gaaatcaaat tttttcagac ggcctgaagc gtctttgtgg gcgggcgaca
     3721 aaatcgtatt gccctgaacc acattattca aagaatgcac caaattattc aaaatcagat
     3781 tcagccgcaa aagattggac gatttttgcg aaatatcctg cgtataaatc atacatttgt
     3841 cttcgccgat ggcatgggcg acgttcatca acagcgttcc agaaccggcc gacgggtcgt
     3901 aaacgtccac gctgcggatt tgcccgcgca cctcctccgg caccaaaata tccgccataa
     3961 tccgcgctac tgcgtgcggc gtgtagtatt cggcgtattt tccgccggaa ttgctgttgt
     4021 agtctttaat caggtattca aaaatcgtgg cgaaaaaatc aaatttttgc gcaaaaatcg
     4081 cctcaaaact aaaacccgcc aacttagaaa tcagcgcgcg gcaaaaatcg tcgcggcgac
     4141 cttcgtcagt aatgtactga ctaatacgct caaacaacac gattttcgcc ccgccttcag
     4201 tttttaccga aaacagttcc gcattatgtg cggcaatatc ggtcagcgta tcatcaaaga
     4261 gtttggcaaa gtccgcgccg ttttgtcgct ccgacaaata cttgatggaa tgttcaggct
     4321 tcaaaaccgc tgtttttccc tcaatatcca tattgatgaa ctcaatcgcc tcgtcagggt
     4381 tttctttgcg gatttgtttc acttcgaaat cgtatttgtc atttaggaat ttatacaaaa
     4441 acgcctgact gatgatttta aattcgttgc catcgttacc taagccatag ttggcgcaaa
     4501 tggtttttaa gctgtcgatt agggatttga tttgttcggt aaagtgttgt tcggtcatgg
     4561 aatgtctcgg tttgttgcta gcgtcgctta aattttgttt agcattagtt ggtttgctgg
     4621 cagattaaat aggttgaaca ctatttgcca accttttctc ttttcctaat gctgttgtgt
     4681 aataacgttc atcaatacca tataacaaat gtttcagctg tacatcagta gaaatttcta
     4741 cacgagagcc atctgcgtta aatttcaaga tattattatt atattcagca aggtaattta
     4801 atagttcttg tctttgatct agcgtcatat tattcaatct atcttgaact aaagctattc
     4861 ttttcctatt gggaatagat actttttcac ttaaaaaatc ttcttttaaa tcaataaaat
     4921 cgctttctaa gaattgctgt acttcagtat ttgtagcttc tcgatacaaa tcttcaatcc
     4981 ctttaaatat acttgaaata gaagaaaggg ttctaaatat taatttatca tcctttatta
     5041 tataaacagc atcaggaata tctttaataa ccaataagtc ttgtggttcg catagtttcg
     5101 caccatttcc gcatatagtt agcaagtgct tctttttgag taataatgaa cttgtgattt
     5161 tctggaagaa tagtgcatca ttagtacaag atactaaata ctttagtttc tctatattta
     5221 tttcttcctt ttttatttca ctaaacattt ttgaatcaaa taaatttgag ttatccaaaa
     5281 acttaggaca aaaatcttga ttctttaaat tttcaatttg aaaccaagta tcatcatcaa
     5341 gattgtaatc atagttatat gttataaaat ttaaattctc gtaagaaaag tcagggaaaa
     5401 tatgatcatc agataatatt tttactaaat ctttcttgca agtaatttta gctaaaacaa
     5461 aattcattat tgaactccta tttttctaag aaagtaaaat tattaattcg atatacagca
     5521 atcgaactta cactttgtgg cgttctaaat tcctgtttac taatcagcac taataataac
     5581 cctgattcag tttttgcttg ataaaatcga tagccaaata agaaaaaaac agggttaaaa
     5641 taaaatgact tagagcatga aactagtaag aaaataattc catacataac aaatagcaaa
     5701 aaaagattat tatcgggtat gcttagagca acaaaaaaat aaccaagata gctaggtaag
     5761 aaattatcgt taacatattc taattctttc acctctcctt gcttgaattc atccttcccc
     5821 aagtatttgc ttagccataa gacagtagcg gttgcgataa atggtattag aaaataaaaa
     5881 agtagactta acttagaaat aggttctatc caatgatttg aaattacacg ataaaaccaa
     5941 gtaaggtcta atatataata ttgcgattta ataaaatata ttgataacag caaagatgta
     6001 ctacttatat ttaataatat tttaaatagt ttatccatct cttgctccgc tacatcttac
     6061 ggatacctgc ccgttcatca gcatgggtag taggaaatcg cgtagttggg tcaggtggtg
     6121 gttttgtttt agattatttc gaactttaac aaagaaagta tttgctattt cattatattt
     6181 ttgagaaata tctttactag gcaaaattat tttaaattct tttaagaatt taaaatgtct
     6241 agcataacca taacttgata aatctatttg atttatgatt tggtaaaaca aatagtttgg
     6301 cattcgttca ttattgctta atattacttg tgtaccatct gctccccgcg catattgaaa
     6361 attaactaac ttaacaattc ttgtatgatc accaaaaata atatgagcat cttgtgggtt
     6421 taatatagat ttttcatcat tggtaaatcc acaaataaaa tcttgacttt ggtcaacaac
     6481 aggatatttt ccaaaatcct taatatcttt atttaatatt tttgtagtat ttgggatttt
     6541 tgctaagcaa gattgtaatt ctatacttcc ccaccccttc ggaatttccc gtttcaaggt
     6601 ttcgtcaaac accatgtcgc cgcctgagga tttgtagggc ttgccgttgg cgtcggggaa
     6661 atcgaactgc acaaaccagt agtcgtacag ggttttcgcc atctcttcca agcgcgcgtt
     6721 gatttgtttg ttcagggcga tttttttgtc caaagcagat aggacggcgg caatggattg
     6781 ttgggttttg aggtcaaaaa ctggaatttt aaattccata atttgtgttt tatcgccccg
     6841 tggcatcttt gtaccctttg cacctttcat tgcatggata aaaaaatcat cacgaaacaa
     6901 agcataaaat aagaaatgac tatctgtttt tgcattagca cgaattgcca aaacatcagc
     6961 agaacaacct ccatcaaatt gggcatacca aatttttttt agatatggtc gtatattggc
     7021 taataaaata tcgccctttt taaatgcagt tacttttcca ccttgaattg gtaaagacgt
     7081 tgcacattct ataccttgct tattttgcaa tatattgtct gttgaaatat attggctaag
     7141 cgaaatttca tttgtatcaa ctttgttatt tatatatgtt gcatgattct ctaatgcact
     7201 attcatctta actgtatctc taaaaactct tcaaaggccg tctgaaaaaa catttcaaaa
     7261 tctgaccgca cttttttaag cagcctgcat tgatgcctgc tattttttca ggctcagcag
     7321 ttcggcaata tggcgttcgc cctcgcgttc tttttccagt ctgcgtgcgg cggcaaattt
     7381 ttcgtattcg atgcgggctt tttcgtctgc ctgcgttttg ctgattgtcc ctgccgtttg
     7441 taagacttgg cggtcattga aagtgaggaa ggcatccagt ttttccgtcc agtcttgcag
     7501 gaatatctgt tttttcatgc tcgcctggtc ttcggcaaaa tccagccaca tggaaacaat
     7561 gcggttgagg gcatcgattt ctttttcatt caggtagttt ttggcaacgg ttacatcagc
     7621 tttggcgatt tctttgcccc gccaatgggt cagccccata ttgggtttcc ccgcatctgc
     7681 cctttggtaa ataatttcag gggcggtatg gcgggtgcag gcgtaatgaa gtttgttttg
     7741 tatgattttg aaaaaatggg tggtttcttt gaagctgggc tggtaatccg ccgccatggc
     7801 gaatatttcg cgcacgcgca gatacatccg ccgttcgctg ctgcggatgt ccctgatgcg
     7861 gttgagcaac tgttcaaact gatcttcggc acggtttgtc ccgacaggcg ggtttttcag
     7921 ccggtcgtcg tttaatacga agcccttgct gatgtattcg cccaatgtcc gtgttgccca
     7981 ttggcggaat tgtgtaccgc gtgtggagcg gacgcggtag ccgacggcga tgattaggga
     8041 gaggggataa agccccatgc ggtagttctt gccgtctgca gcagttgtaa actgaaagtt
     8101 tacaactgaa tcgtccagtt cttgttctgc aaatatggct ttgatgtgtt taccgatgtt
     8161 ttgtttgctg gtttggtaga gttcggcaat ttctttttgg gtaagccata gttcgccgtc
     8221 aagctcgcgc agggtaaatt cggatagtcc gtcttctgtg gtgtagatga tgatgtcgtt
     8281 gttgtgcata gctttcctgt atttataaat ggttaaggct gcctgaaaat ctactcctca
     8341 aatccgcccg ctttctttta aatattcccg caccaacagg cggttgatgg cttggatgtc
     8401 tacgggttga acaggaaatt gttgctccgt tctaaagcgc tttaatacga tgccctgcat
     8461 ttgtttttca aagtaatttt gattgtccaa aatctgctcc atatccagca ctttttggtc
     8521 ggtatcggtt tttacaccgt ttagcgcgtt aaagactttg agcttgtcgc cgtagaaggc
     8581 agcgttttcc atcagccgct tgtgggtgcg ggcgtatttg gcgtcgccac cgtatttatg
     8641 ccgcaagagg tcgttttggc ggttcagctc tttgattttg gcatagacgg tttcgagtgt
     8701 ggcgatgttt gcctgcattt cttcctgccc gacttcggcg aggttctttt tcttgaagat
     8761 gcgttccagc tcttcgcgta ggctgatgta ttcggggtcg ccttggtcga agttgcccgc
     8821 cagtccttcg cggactttgc gcatgatgtc ttttaaatcg tcggcaagtt tgagttccgc
     8881 ctcgccgatt ttgacgaatt gaaagtaaac gtcttccagc gcttcattga gcaaatgggc
     8941 ggtgtcgcct tgctgtaatt tttcggcaag gtttaaggta tccaagcggg cagcggtttc
     9001 gcggtacaaa agattgagct tgtcaaaatc cagatgcgcg agaaattcgt ggctaccttg
     9061 caggcgcagg atgttgtaca actctttggc ggtttgcagg gcttttttta gggtaagtag
     9121 ctgtttttta tcttctattt ggctgatttg gcagcaaaat tcttcggcgt tttcggtatc
     9181 gaaatcaaac agggcgtttt taatgtctgc aatttcctgt tcgatttctt cggcagtttt
     9241 gaaaagctgg ctgtaactgc cgatttcgtc acccaattca ttagaaagtt catcccaata
     9301 ggcgcggttg gttttgtcga attcgcgttc gatgtcggca aaatcgacaa cgtagccgta
     9361 acggtaagat ttgtaggtgc ggttgacacg ggtcagggtt tgcaaaagat tgtgggcttt
     9421 gatgagcctg cccaaataga gttttttcag gcgcggcgcg tcaaagccgg tcaaaagcat
     9481 gttgtacaca aacaaaatgt cggttttgcc tgctttgaag tctttaaccc attgatcgcg
     9541 ttcgtcctta gtgccgacgt cgtgcaatat cagcgcggcg gttaaattat ggtttgaggc
     9601 cgtctgaaaa tgctcaaaaa gctggcgtgc ctgttctgcg ctgtcgcaaa cgaccatggc
     9661 gccgaggctg tcgtcttggt tggtttttct gaatttggcg aagtcgtcca agatgtaatc
     9721 gagcatcggg cggacgaaat gcggatgggc gtagatttct ttgcggtcaa agctgccttt
     9781 ttcgacttca agctgcgcca gtgcagcctg caattgggct ttgtattggc tgctgatggc
     9841 ttcgcgaatc aggcgcaggg tgtagccgtc ggcgatggag gcgttgtaat agtatttatg
     9901 gatgtagtcg ccgaagagtt cgcgggtatt gacgttgcct gcggttacgc cgataagcgg
     9961 cgtgccagtc agcccgattt tgacggcgtt tacgtcggac tggttgaggt tggcaagaaa
    10021 cgagcctttg gggttgtagc tgcggtgtac ttcgtcgaga aaatagacgc gctgaatggc
    10081 gaggtcgtag tcgttacggg cgacgacatc ggggtcgtct ttgaattttt ggatgttgac
    10141 gacagtgatt tccgctttac ctgcgtggtt gtgcagggtt tgggcggatt tgatgtcggc
    10201 agcgaaggct tcgcggctgt tgatggtatg gacgattaag ttacggtcgg taaattcctg
    10261 atgcgcctgt ttcaataaat cgagcctgtc cacgataaag tagaatttcg gcacgatgcc
    10321 ctgtttggcg taatagtggg tcaggtagcg ggtgttgtaa taggcaagcg cggttttgcc
    10381 ggagccttgg gtgtgccaaa tcacgccttt tttgccgccg tttgccaaat gtttttcaat
    10441 ggcgagagtg gcaaatagct gcggataccg catgatgtgt ttttgcacca agccttgact
    10501 tgctttgacg taagtcagcc cgtgttgcag aagaaaagaa agacgttcgc ggcaaagcag
    10561 cgaagtcagg atgcggttgg tcggcgtatc gggcgattta ttgctgataa attcggggct
    10621 gtgtttgata acgggcaggt tgttgtcttg caggacgttg ttttcgaggc cgtctgaaag
    10681 cgtgttcaat aattcggcaa gatttaattt atgttcttcg cggaagtagt taaacacggg
    10741 cttaccgtaa gcagacgaag cgtaaaacgc gccttgtgcc ggttcggttg cgccgtcgtc
    10801 gtattccatg ttgttggaaa aaatcatgaa ttgggtgatg ttgatgaaac ggcgaaattt
    10861 ggaatttttc gcacgtttgc ccatgcgctc ccgctcttcg ccgattccgc ctttgttgtt
    10921 gggctttttg acttcgataa aaaccaaagg catgccgttt accagcaggg taatgtcggg
    10981 gcggaattct tcatcgccgt tgatacaggg caattcggtt acaacgtgga agctgttgtt
    11041 atcaaaattt tggaagtcga tcagtttctt gccgccggat tgattggtaa ggcgttcgta
    11101 aaacttttgc cccaagtctt cgttgtccag ttctaagcgt atgtcggtca gcaaacggcg
    11161 tgcatcgtcc ggcgacaaat cgggattgat gcggcagagg ctttctataa agattttggg
    11221 aaagatgttg gttggtttat cccaattttc gtttttgagc gagaggtagt cgtagcccaa
    11281 gcgcatcagg tgcaaaacgg cggggatttt gacgcgggaa ttttcgttgt gagtttggga
    11341 cataaacgta atgattcatc aaaatttatt gaaacggatt ataacacctg aaaaacccga
    11401 tacgcctttt tggtgtaccg gctttgccat actgttctgc ttcagacagc attgcttcat
    11461 tttgccttta atacttcttc gtccagcgat ttcaaccatt ccagcttttc gccgattttg
    11521 atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagcc gtcgggcata
    11581 tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta ttcgcgtccg
    11641 tagcccaatt ccttcatcag cttggtcggg gcgttgcgca ggtggacggg cacttcgtcg
    11701 ctggcgtttt ctttgacgaa gtggcgcatt tggttgtatg ctttgtagcc cgcgttggat
    11761 ttcgcggcgg cggcaaggta cagcacggct tgcgccagtg cgagttcgcc ttcgggcgag
    11821 cctaagcgtt caaaggtggc ggcggcatcg ttggcaattt gaaaggcgcg cgggtcggca
    11881 agtccgatgt cctcccacgc catgcgcacg atgcggcggg cgaggtagcg cgggtcggtg
    11941 ccgccgtcga gcatacggca aaaccaatac agcgcggcgt ttggatgcga accgcgcacg
    12001 gatttgtgca gtgcggagat ttggttgtag aaactctcgc cgcctttgtc gaaacggcgg
    12061 atttgtgccc cgagaccgtc ggcgagaaat tcggcggtta aggttttcag acggcgcgtg
    12121 tcggcggagc gtaacagttg ttccaacaaa ttcaacaatc tgcgtgcatc gccgtcggcg
    12181 gtattcacga gtaattcttg cgcatccgct tcaatcgtaa actcttggta ttcaggcaaa
    12241 gccaacactt tggcaatcag tttcttgagg tcgtctgaag acaaggattg caaaacatac
    12301 acctgcgcgc ggctcaacag cgcgggattg acttcaaacg acggattttc cgtcgtcgcg
    12361 ccgataaagg tcagcaaacc gttttccaca taaggcaaaa atgcgtcctg ctgcgccttg
    12421 ttgaagcggt ggacttcatc gacaaacaaa atcgtcgccc gcccctgctg caaagcgatt
    12481 tccgccttgt cgattgcccc gcgtatgtcc ttcacgccgg aaaacacggc ggaaacaggc
    12541 aaaaactggg cgttgaaact ctgcgccaaa atccgcgcca aggtcgtctt gcccacgccc
    12601 ggcggccccc acagcaacat agaatgcggc ttgccgccct ccaccgccac gcgcaaaggt
    12661 ttgccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg cggacgcaat
    12721 cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataag ggctccgtca
    12781 acaggttttc aaacaatatg attatacggc agggaaaggc ggcgtgccgc atacggatac
    12841 cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg agagacttca
    12901 cacaatatat ccggcacgga gaccgattcc gcaccggcat gacaataccc aaatcagcgt
    12961 ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca ttgctttgtt
    13021 gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata ttcaagagat
    13081 ggaatgggtg tctttatttt ctgatccgca aaaagacgat gatagtctta taacccttaa
    13141 agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag gtgaaaactt
    13201 tagaaaatta gaacttatta ccactggtaa aaatgataat ggaaatttaa cggtaaatgg
    13261 aatttacggc atccaatctt ttgcagaccc gcaattagga tatacgcctg aattatcggt
    13321 gaaaagcaat aatgacattc tatttaaaaa taatctccaa tctgttgatg tgcaccctta
    13381 ttccggaaat atccatttgg atgccaaagg aaaaattcaa tttaatttga agttcccgat
    13441 gttgatgggg tacaagatgt agccagtaga aaaaaatacc gacaaacaat agtgccttag
    13501 ttcggtatgt caacactatc agccccccga tgaaaatgac aaaggcaaca tatcctttca
    13561 ttcaaaaaca ggcaatttgt tcaatatgaa cgttaaagtt cataaagaca cacaccattt
    13621 cggtattcac aacctcaaca ataccgatgt tcatctgact gccgaagaca gcgataatgt
    13681 gattgagatt aaaggggaac tcgccgaccc tatgccgaca ggaaatgttg agagtacaag
    13741 ttttttaagg ggcattgaaa cggcttttaa atccaatacc gtattaacgg ggaataacaa
    13801 taaaatatcc atcgccactg agggcaaggg cttgggattg ggcgtaaatg gtctccagtc
    13861 caactccccc tattccggac acacgacggg cattttcatc aataatcaat caagcgacct
    13921 tacccaacct tcccttgatg gcatcagcac tatcaaactc aaagccgtca agggaaataa
    13981 tgaagttgat ttaaatgtaa aaaaccacgc ctccgtaaaa ggcattatcg cgtcgcattc
    14041 tgcaaaagca acgcttgaag ccgaagggga caatattgtc caggttaaaa atccggacac
    14101 caatacggct ttaatcgatg ctttgaaaaa acaatacccc aatgcttcga aagaactata
    14161 cagggtgggg gttcaatcca cgactggaac agtacgcatt tcgccaaacg gcaaaatcgc
    14221 attaacggaa ttgaaaactt ttggaattgt acaaaacggc atttgcg
//
LOCUS       DAWGBY010000042        13490 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.042, whole genome shotgun sequence.
ACCESSION   DAWGBY010000042 DAWGBY010000000
VERSION     DAWGBY010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13490
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.042"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(35..409)
                     /locus_tag="WHG62_001065"
     CDS             complement(35..409)
                     /locus_tag="WHG62_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ1725188.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWLENYGTEGAEVTYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNPRVIVINLDN
                     IENHEFFNSFEDWLELAIKDTW"
     gene            complement(582..938)
                     /locus_tag="WHG62_001066"
     CDS             complement(582..938)
                     /locus_tag="WHG62_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ1725189.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITENQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(1081..1425)
                     /locus_tag="WHG62_001067"
     CDS             complement(1081..1425)
                     /locus_tag="WHG62_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725190.1"
                     /translation="MNLENYENILIKLLFYHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKERFGSFMCWINTNLMEFEGFFFNDLLPD
                     NMIINNFFEIND"
     gene            complement(1584..1985)
                     /locus_tag="WHG62_001068"
     CDS             complement(1584..1985)
                     /locus_tag="WHG62_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725191.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            complement(1989..2729)
                     /locus_tag="WHG62_001069"
                     /pseudo
     CDS             complement(1989..2729)
                     /locus_tag="WHG62_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(2799..3116)
                     /locus_tag="WHG62_001070"
     CDS             complement(2799..3116)
                     /locus_tag="WHG62_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725192.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(3113..3715)
                     /locus_tag="WHG62_001071"
                     /pseudo
     CDS             complement(3113..3715)
                     /locus_tag="WHG62_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253822.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(4141..4485)
                     /locus_tag="WHG62_001072"
     CDS             complement(4141..4485)
                     /locus_tag="WHG62_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725193.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(4523..4870)
                     /locus_tag="WHG62_001073"
     CDS             complement(4523..4870)
                     /locus_tag="WHG62_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725194.1"
                     /translation="MFFLDDVNVFLDDLNVFLDDLNTNPITDEWYMSNFADKHIKILE
                     SYEAFDILKQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYK
                     QEISQDILNEIFR"
     gene            complement(4892..5080)
                     /locus_tag="WHG62_001074"
     CDS             complement(4892..5080)
                     /locus_tag="WHG62_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HEZ1725195.1"
                     /translation="MEEVKANPQDKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEI
                     HYIENSRTGEKTDFKFKD"
     gene            complement(5150..5494)
                     /locus_tag="WHG62_001075"
                     /pseudo
     CDS             complement(5150..5494)
                     /locus_tag="WHG62_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(5578..5880)
                     /locus_tag="WHG62_001076"
     CDS             complement(5578..5880)
                     /locus_tag="WHG62_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725196.1"
                     /translation="MLNEIFEIYSRQGESLIGIGIREAALPVPIAIDILNLFINERIL
                     VLRGDIYIKKDNYFYQTYDNWYYEGSNLFNSIDKAMHYLSQIKLENAYVSFVLKFI"
     gene            complement(5903..6172)
                     /locus_tag="WHG62_001077"
     CDS             complement(5903..6172)
                     /locus_tag="WHG62_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725197.1"
                     /translation="MMTESHGYLSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYCWLGFDELPQSEKIKFLSYLNILSIHKEIQDETVNRVYTD"
     gene            complement(6193..6399)
                     /locus_tag="WHG62_001078"
     CDS             complement(6193..6399)
                     /locus_tag="WHG62_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725198.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(6365..7894)
                     /gene="mafB"
                     /locus_tag="WHG62_001079"
     CDS             complement(6365..7894)
                     /gene="mafB"
                     /locus_tag="WHG62_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ1725199.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDHHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWENNPNQNW
                     WGNRMDDVRGIIQGAANPFLTGFQGLGVGAITDSAVNPVTYAAAQQTLQGIHDLGNVS
                     PAAQLAAATALQDSAFAVKDSINSAKQWADAHPNITATAQTALAVAEAAGTVWGGKKV
                     ELNPTKWDWVKNTGYKTPTARPMQTLDGEMAGGNKPPKPSTQQHPTHSDNNIGLPASY
                     VKPDTSISPTGTIQDRIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLS
                     KQTSDKILGYQTEHRRVRYDINNNIYVLANPKTFKIKTMFKPNLGKKYYDGEFKKDMG
                     N"
     gene            complement(7934..8896)
                     /gene="mafA"
                     /locus_tag="WHG62_001080"
     CDS             complement(7934..8896)
                     /gene="mafA"
                     /locus_tag="WHG62_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ1725200.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVEADNSHEGYGYSDEVVRQHRQGQP"
     gene            complement(9080..9799)
                     /locus_tag="WHG62_001081"
     CDS             complement(9080..9799)
                     /locus_tag="WHG62_001081"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ1725201.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(10016..10870)
                     /locus_tag="WHG62_001082"
     CDS             complement(10016..10870)
                     /locus_tag="WHG62_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ1725202.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(10999..11727)
                     /gene="rpsB"
                     /locus_tag="WHG62_001083"
     CDS             complement(10999..11727)
                     /gene="rpsB"
                     /locus_tag="WHG62_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ1725203.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(11928..12137)
                     /locus_tag="WHG62_001084"
     CDS             complement(11928..12137)
                     /locus_tag="WHG62_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725204.1"
                     /translation="MWHIVAIGYLFVAVMFSAAQPSIARALIYLVFWAVLPTVFTVFV
                     VTIRRRNRLMKQQEQAEFEQQRAQR"
     gene            12215..12796
                     /locus_tag="WHG62_001085"
     CDS             12215..12796
                     /locus_tag="WHG62_001085"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ1725205.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKKGR
                     KIGVYWPMGKELRLDGFVRVAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     AKLNVPQFAGRKRRVHDLNLLLVPVVGMDRLGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            12857..13447
                     /locus_tag="WHG62_001086"
     CDS             12857..13447
                     /locus_tag="WHG62_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ1725206.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     VPHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         3481 a         2830 c         2861 g         4318 t
ORIGIN      
        1 tccagggcag cctcatctct ttatagatag ctgcttacca agtatcctta attgctaatt
       61 caagccaatc ttcaaaacta ttaaaaaatt catggttttc tatattatct aaattaatga
      121 caataaccct aggatttcct gttacatcat taccatcaaa ataagcttcc cattctccat
      181 tactagcgaa tgggataaga tttaaatcag gcaggataga atttctaaat atataagtta
      241 cttctgcccc ttctgttcca taattctcaa gccaccagtg aaaattatgt ggctgaatat
      301 aaggtattaa agatgtatcg ttagagatac gaacatactt ttcaggataa caaaaccttt
      361 caggaagcat attactagga tataaattaa attcattttg aataatcatt tcgttacctt
      421 aggatcataa atactaccat taggaaactg ggtagaccaa tttggtggtg ctagttcatt
      481 ttcaatttgt tttttaattc taaattgaat agcttctccc catgtttgcg gcatctaatg
      541 ctgcttgctc tgcatcaata ttactaaaaa ttggattagt ctcaaaaatg aaaaattact
      601 gttttttcat tttttatagc atattcaagt acatgaataa tatttttcac taagggctct
      661 gtagaaaaat ctgaattttg taatttttct tttacagcca aaatactttc cttatctatt
      721 agccaatccc cctcacttgg tccaaataac caattatcgg taatttcaga aacaagtctc
      781 cataatccac gattttgata ttcaataatt tgattttccg taatttctac aactgtttca
      841 gattgaatgt ttttataagc ccaatcaatc atttcagtat attcactaat tgaaacattg
      901 tcttttaaac agaaaattaa caggttgtgt tcattcattt gtctaagttc ctgatatgag
      961 tttgttgttg taaataatct tttgcttgct taccttgtaa attaaaggat taaccgcacc
     1021 ttggatgatg ccgcgaatat catccatacg gttaccccac caatttttat tggtgtatcg
     1081 ttaatcattt atttcaaaaa agttatttat tatcatatta tcagggagca ggtcgttaaa
     1141 aaaaaacccc tcaaattcca ttaaattagt atttatccag cacataaacg aaccaaagcg
     1201 ttctttccct gagtgtaaat atttaaaatt aaactcaaaa taagtttttt tgcttagaaa
     1261 atttaatggt ttttctatag tgaaaaaaaa gcccttactc gttttcgttc gagatactat
     1321 tttaaataaa tttttatttt caataaaata agaatattca tttactaagt tgttatgata
     1381 aaaaagtaat tttattaaaa tgttttcata attttctagg ttcatttcta gctcaattta
     1441 aaatgatttc attgttgccg taccaatgcg aaatttacca tcaacaaaat ttcccttcac
     1501 tgatacaggt acaccatcaa cttgggtagt tttattttca ggctgcctga aagaaagata
     1561 ggcaacttat tactcatctt atgctagccc tcaataattg aatacgttgc actagaacca
     1621 attatttcta tgaatgtttg ctcaaacata aaaatatagt atttaaagaa ttctctattc
     1681 aaaggaaaat aactttcttt caatatccat tccgcataac actcatcaag aagttcaaaa
     1741 aaagattgac caccattttc atgaagcaaa gctctatctg catcttccga aattaaatcc
     1801 ataaaagtat ctataaaata cgattcatca acaaccctaa aatgaataac atcttcaata
     1861 aaaattttta tggttttatc cgtatttcta taaccaactg ctataacttc tactttatca
     1921 gagtttattg ctgcattatc aaaatagaaa tagccagttg ggaaatctaa gctttttaat
     1981 ttcataattt atcgtgtatt tccatatctg atttttattt ttcggttatt actaattgtt
     2041 atttcaagtg ttggttctcc accactacta tcattacgag cattaaccgc acgcccatca
     2101 ggtaaattgc ccgttatcgt tccattagga cgtgtttgta catttcgaac attcagacta
     2161 ttaaaatcat ttagtgcgtc attgtaatcc cccactttat catactgaac agcgggacct
     2221 tttgttttac tcctttgagt agtattgctc aaaatgtctt tgatttgtaa atcactgcgc
     2281 gccttaccgg cttctatgcg agctgccaca ctactcgggc tataggggtc gctatcaatc
     2341 gcaggattac caccgctggt tttttgtccg ctagcctgtt tcccaacctg ctgtactgta
     2401 tcgccaattt catctaccgt acctaacgcc ttagtctgca tatggcgaac agcaggtttt
     2461 ttatagccgg tatttttaac ccaatcccat ttggtcgggt taagttctac ttttttacct
     2521 ctccaaaccg tacctgcggc ctctgctacg gcaagggcag tttgggctgt tgctgttata
     2581 ttcggatggg catcagccca ttgtctggcg gaattgatgc cgtcttttac cgcaaaagca
     2641 ctgtcctgta atatgctcgc ggcagcaagt tgtgcttccg ggcttaattt tcctaaatta
     2701 ttaatacctt gtagagtctg ctgcgcagag atgtagcaac tgtattttta ccccgtcggg
     2761 taaaaataca gttgctacgg ctgctgggaa agcagttact attttcccag tggctcaaaa
     2821 ttaattgttt cagcagatat ttttataata atccctacat caataataat ttcactataa
     2881 aattggtatt tatatagctc tatttcgggt ataaacaagg gaaacaagct atcttcctta
     2941 tcctcataat ctacgaaatt atttgtatct aatttaaaat tcaaaatatt actgcatttg
     3001 atatatccga aataattacc ttcaattgta tctgtaaaag ataatgtaag ggtatttcca
     3061 ttatcggaaa agattatttc ataaaggctt acattgtgaa aaatattttt tttcatttga
     3121 taaaatatcc agaatgatga cgattatttg gcaatggatt gccttcataa ttttgtcgtt
     3181 gcggatattt tccctgtaca ccatcggttc gcggcactct ttgggttctt ataacctctc
     3241 catttggacg aatatctatt ttcacgccat caggaccttt ccatgtttca tattgagcct
     3301 catctgaacc agtacgtcta aaaccttgtt cttgcaatgc ttgacgtaat tcatctcgcg
     3361 tagttggtct gatagattta acaactggct tgtttcctcc tgccatctca ccgtccaacg
     3421 tctgcatagg gcgggcagca ggtgttttat agccgttatt tttaacccaa tcccatttag
     3481 tcgggttaag ttctactttt ttacctctcc aaaccgtacc tgcggcctct gctacggcaa
     3541 gggcagtttg ggcagtagct gtaatgttcg gatgggcatc agcccattgt ctggcggaat
     3601 tgatgccgtc ttttaccgca aaagcactgt cctgtaatag gctcgcggca gcaagttgtg
     3661 cttccggact taattttcct aaatcattaa taccttgtaa agtttgctgc gcagagatgt
     3721 aggtcggata tttgtatccg acaaaaatat ttgacgcatc tatcgtttcc gaaatgccgc
     3781 tgttggaaaa tgtcggattc gagaatccga cctacggcta tttcgtttaa gtcataaata
     3841 gccattcatg ttccttctga atttgctttt gctatcctta gaaccaatca tataaacatt
     3901 atcatcatta attaatgttc taagtttatg aagcggtcaa atctgtcaaa ctaccagaga
     3961 tgaagcatat cctcctggaa gtaattctgt tcgtgctgtt tccatatctt ctttgccatc
     4021 atcagttact tctctgtcta aataaaatct tacgataagt ttttgtctaa tttcatcaaa
     4081 ttctgccgta attaatctta tattgatatg aatacacggt tcatacctgc tattagccag
     4141 tcaggtgtag ttggatgggg attcattttt aataatatct tcaagcaagt gaaatgtaag
     4201 aaaagcgtag atacttgaag gccggctatc tgattggcaa aaagaaattt cggagataaa
     4261 gaatttccgt ttatattttt cataaattaa atcaacacct tgttttacat aaaaactaac
     4321 ttcctcagga aggatattta taacattctc tccttttact tttatagtta atggtttgat
     4381 ttttatgttt tcatgaatat ctgataggat tatttctaaa aaattatttt tatttccagt
     4441 cattctggct attttatgta tatttccatt gtgttcgatt atcattttat tttttccaag
     4501 gatttccttc tatattgata gtttatctaa agatttcatt taaaatatcc tgactaattt
     4561 cttgtttata taattctaca attttctgtt tctgtgtatt tgtataaaat ttttcgttgg
     4621 tatctgcttg atattttaat tgtctcaata tttccatgat ttcatattct gatttttcat
     4681 catattcttc aatcatgtaa tcaacaaatt gttttagaat atcaaaggct tcgtaacttt
     4741 ccaaaatttt aatatgttta tcggcaaaat tggacatata ccattcgtca gtgattggat
     4801 tagtatttaa atcatctaaa aaaacattta aatcatctaa aaaaacattt acatcatcta
     4861 aaaaaaacat ttacatcatc taaaaacatg actaatcctt aaacttaaaa tctgttttct
     4921 caccggttct tgagttttca atgtaatgta tttcaatttt gtttacgttt tgaacacgct
     4981 taacccaacc gtcttttgct aaccaaccat ttttagtatc ggacatagga ggtattctcg
     5041 caggagtttt gtcctgtggg tttgccttaa cttcttccat tgctaattgt tcctttaaat
     5101 tattaggtat tgtacgaccg gttgattttt caacagattg tgtccctatt tttaatgatt
     5161 tgtttccccc agccatttcc ccgtctacag tctgcatagg gcgggcagca ggttttttat
     5221 agccggtatt tttaacccaa tcccatttag tcgggttaag ttctactttt ttaccgcgcc
     5281 aaaccgtacc tgcggcctct gctacggaaa gggcagtttg ggctgttgca gttatattcg
     5341 gatgggcatc agcccattgt ctggcggaat taatgccgtt ttttaccgca aaagcactgt
     5401 cctgtaatag gctcgcggca gcaagttgtg cttccggact taaatttcct aaatcattaa
     5461 taccttgtag agtctgctga gcggctgtat ctgagccggt cagtgtaggt tggattaaaa
     5521 cccagcattt tcaacatctt gatgttttac tataaatcta ttcttgtgct tcctttgtta
     5581 gataaatttc aacacaaaag atacgtatgc attctctaat tttatttgag ataaataatg
     5641 cattgctttg tcgatactgt taaataaatt acttccctcg taataccaat tatcatatgt
     5701 ttgataaaaa taattatctt tcttgatata aatatctccc ctcaatacaa gtattctctc
     5761 attgataaat aaatttaata tatctattgc aatagggacg ggtaatgcgg cttctctaat
     5821 tccaattcct atcaaagatt ccccttgtct cgaataaatt tcaaaaattt catttaacat
     5881 gttaatctct atctactatt tttcaatcgg tataaaccct attcacagtt tcatcttgta
     5941 tttctttatg aatacttaat atattaagat agcttaggaa ttttattttc tcagattgag
     6001 gcaactcatc aaaaccaagc caacaataaa aattgttata tgattttaaa aaatcaacaa
     6061 tttttatttt tcctaaaacc aaatcttcga ctaactgggt tgcataaata atatcattta
     6121 tgattttaac aggtaaatta tttgataggt aaccatggga ttccgtcatc attgatttct
     6181 ctaggtgctt atttatctga ttggtaagcc ttttgcgtaa gcttctttcg cctccgcaag
     6241 tgtcatttca ttagggccac catctatatt agtttctcct gtattttgcc actgacaaac
     6301 gtcacagata tcatagtcca taacttcagt tccgcaaaca ggacaatgta gccatatttc
     6361 tccgtcaatt tcccatgtct tttttgaatt ctccatcata atacttcttt cctaagtttg
     6421 gtttaaacat tgttttgatt ttgaatgttt ttggattggc caaaacatag atattgttat
     6481 tgatatcata gcgcactcgt ctatgttccg tctgataacc taatatcttg tccgatgtct
     6541 gttttgataa caaatcagac gccatttttt ggtagtcttc aatggttata tcgccaaatt
     6601 cttttccatg agctttgaaa tgtccattta aagatttctc agtaggaaac ttggactttg
     6661 tccatctgat gcggtcttga attgttcctg tcggagaaat agatgtatca ggtttaacat
     6721 atgaggcagg taagccgata ttgttatcag agtgtgtagg gtgttgctgc gtacttggtt
     6781 ttggtggctt attcccacct gccatctccc catctaaagt ctgcataggg cgggcagtag
     6841 gtgttttata gccggtattt ttaacccaat cccatttggt cgggttaagt tctacttttt
     6901 taccgcccca aaccgtacct gcagcctctg ctacggcaag ggcagtttgg gcagtagctg
     6961 taatgttcgg atgggcatca gcccattgct tggcggaatt gatactgtcc ttaaccgcaa
     7021 aagcactgtc ttgtaatgcg gttgcagccg caagttgtgc tgcgggactt acatttccta
     7081 aatcgtgaat accctgtaaa gtttgctgtg ctgccgcata ggttaccggg tttaccgcgc
     7141 tgtctgtaat cgccccaact cccaatccct gaaaacccgt tagaaaagga ttggctgcac
     7201 cttggatgat gccgcgaaca tcatccatac ggttacccca ccaattttga ttggggttgt
     7261 tttcccatat cagttttcct gcttcatccg cacggctgaa aaaaccagag gcggcaccgg
     7321 cattttcttt tagccaacgg tctgaaaatg gggcttgagg gacaatatta gtctttgttt
     7381 ttgttgaagt tcctttgaca taatagctgt atatatccct tgctcctccg gggggcggat
     7441 aatcgctgcc ttgcggtccg tcatatccat cctccggatg gatttccgac cctgtccgat
     7501 gaagttggta aacagtaaaa ccaccgtcta caccgccgct gaaatcagaa gtgctttttg
     7561 aatcatgatg atcgaacgga ctgtgtactt catgtccgtg ccctgaaaaa tgggtttcat
     7621 aaccgataac accttcaaac cctgtccgtt cgtgtgtaat aggcagtatg gggccgaccg
     7681 cagttgcatc aaatgtttgg acggcgtaaa cccgattttt aacactgccg cgaccatcgc
     7741 cgaacagatg gtatttgcca cccggttcgt agtgttttgc ctgcatatca tcgcgcaaac
     7801 gggcatccaa accgttcgca tgactaatgg ggatttgcag caacgatatt gccgctgcaa
     7861 acagcatcat gaatttttga ataggcaaat tcattttgtt ttccttggta gcaagcggtt
     7921 atggtagtgt gaatcaaggt tgcccttgtc tatgttgtcg cactacttca tcgctgtatc
     7981 catacccctc atgactgtta tcagcctcta cggatggggc agagttaccc gtatgattgc
     8041 cgtatggtcg gatatcggag aaatcgacca ttaatccttc cgtcggttta attcctttgc
     8101 ttactttata cggccccatc cacaatgcgt aattttcttt ataggcagct tcaaacgcat
     8161 tggtttttgg tttgatgagc aattttttat tggttctgtc tactgcgaaa tattccagtt
     8221 ttgtttgggc tttcagtgtt tcggcattgt ataggtgcat ttcggttctg ttgcgtatcg
     8281 ttccgaatac gtcgatgtta ataaacacat ctgtatcggc attggcagga gaaacaacgt
     8341 ctatgccgcg caggaaaaat acggtctgta ccaagtggga aagaaaggca gtgtcgcgcg
     8401 ggttagtcgt caaggtttca tttcgataat cccccatccc gccaatattt aagcccagac
     8461 tgcttttact tccgctaccg tctgattggg tgcgagagcg tgcaggggca ttaagtgtag
     8521 ataaagaagt ggttaaacct gtcaaaccgc ctgatgttgt ttcagcggtg gtttcgtaac
     8581 gtggataggt gtaatcggta cggacggcag ggctgtttat gtattcgcca cgaatcagtg
     8641 catcaatgga gtagcgaccc cctgtcaaac tgcctgaacc ttggtcgccc atagttgcaa
     8701 tgtacaatgc aacttttcgt ccgtgtaatg cctgtaaatc catgtcttta acggcagctc
     8761 tggcagaagc ggccacaagt tcttgttcga ccgcaaagcg tttacctccg ccatgcgatg
     8821 gaatacctgt cagtgtcccg caggcggata aaataaaaac tgaaaaaaga ataggtatca
     8881 gcagccgtgc ttgcatagat tttctccttt gatgaaagac aaattgtatc aagattgtaa
     8941 atatagtgga ttaaatttaa accagtacgg caaggcgagg caacgccgta ctggtttaaa
     9001 tttaatccac tataatctcc atataataaa tggctgtctg aagcccatat gcgactatat
     9061 ctgccgacac tatggtcaat cagcagtgaa ccagcgtacc ttcgttttca ccggttacta
     9121 cacgtttgag cgagccttct ttagcaatgc cgaatacgac aatattgagc ttgcgttcgc
     9181 ggcagagggc gaaagcggtg gcatccatca ctttgaggtt tttcaacaag gcttcgtcaa
     9241 aagtaatggt ttcgtagcgc gtggcggatg agtctttttt ggggtctgcg gtgtacacgc
     9301 cgtcaacgtt ggtggctttg agcatcacgt cgcagttcat ttccgcaccg cgcaatgcgg
     9361 cggcagtgtc ggtcgtgaag aacgggttac cggtaccggc ggcaaaaatc acgactttgc
     9421 cttcttccaa atattggatg gctttggggc gggcgtaggt ttcagcgatt tgctgcatag
     9481 acagtgcgga ttgtacgcgc gctttgatgc ctaaagtttc aaatgcgtct ttgagtgcca
     9541 acgcgttcat cacggtcgcc atcatgccca tgtagtcggc ggtggcgcga tccatgctgc
     9601 ctgcttgggc ggatacgccc cggaaaatat tgccgccgcc gacaacaata ccgacttgca
     9661 cgcccatttt aacgacttcg gcaatttcgc cgacagtttg aacgatggta tcgtgattga
     9721 tgccgaacgg atcggaaccc atcagggatt cgccggagag tttcagtaat acgcgtttgt
     9781 atttgatttg ctgtgtcatg gataccttgc tttcttgaat gtcgtcggtc ggagttgggt
     9841 cgtctgaatt tcaaacggtc ggaatattaa tgatagggtg tgtcggttta ttattgtttt
     9901 gttttcagac ggcctgaata ttcggtcgtc ttaaaatagg taccgcaaac ggttttctca
     9961 aaaaaaagca ccctgattcg tttggaatcc aggtgctttc tttttcataa gtgccttaca
    10021 ctttggcggc tgcggctact tcggctgcgt agtcgacaac ggctttctcg ataccgtcgc
    10081 ctactttgta gcggacgaag ctgaccactt cagtgccgtt ttctttggcg aattgggcaa
    10141 cagtttgatc ggggttcatc acgaatgctt ggccgttcag agtgatttca gccaagaatt
    10201 tgcggatacg gccttcaacc attttagcgg cgatgtcggc aggtttgccg gaagcgatgg
    10261 cttgttcggt gtagatgtgg cgttcttttt caacggtttc ggcatctact tcggcttcgc
    10321 ttacgcattg tggtttagcg gcaacaatgt gcataccgat tttgcgtgct acgtcttcag
    10381 agcctttgta ctcaaccaat acgccttcgg tcgccaatgc gccgtggatg taggcaacca
    10441 gttggttggc agtgtcgatc acttggaagc gacggacaga catgttctcg cccaatttgg
    10501 cgatgatggc tttgcgttct gcttcaacca gttcgctcag ttcttcaaca gaagccggtt
    10561 ttttctcggc agcagttttc gcaacgaagt tggcaaattc tacgaagccc gcgtctttag
    10621 caacgaagtc ggtttcgcag tttacttcga ccaatgcgcc gacattgccg ttgatcgcgt
    10681 aagccaatac gccttcggca gcggtacggc cggccagttt accggctttc gcaccggatt
    10741 tgatacgcag gatttcttcg gctttgtcga agttgccttc ggcttcaacc aaggcttttt
    10801 tgcattccat catgcccagg ccggtagcgg cgcgcaggtc ggcaaccatt tttgcagtaa
    10861 tttctgccat tttgaatctc ctagattttt gggaaatacg gaaaggattt tccgcattcg
    10921 ggaatcgtgt gccgcgaacg gacgttcaga cggcatattt gagaaaaggg gcataacgcc
    10981 cctcttcggt ttgccggatt actcggcagc ggcttcttgg gcagcggcta cggtttcttg
    11041 cagcgcttgg tttttgcctt ccaaaactgc gtcagcgatg ccgcggcagt acaggcggat
    11101 ggctttggcg gagtcgtcgt tgccggggat gacgtatttc acgccgtcag ggctgttgtt
    11161 ggtatcgact acggcgataa cggggatgcc cagtttttca gcctcgacca gagtaccttt
    11221 ttggtagccg gtatcgataa cgaaaatcgc gtcgggcagg cctttcatgt ttttgatacc
    11281 gcccaaagaa cgttccagtt tttcaacatc gcgttgcatt tccaaaattt cttttttgct
    11341 gaaaccgctt tcggcagcat tttccaaggc tgcggttttt tcttccaggc gtttgatgga
    11401 ttgcttaacg gttttgtagt tggtcagcat accgcccaac cagcggtaat cgacgaaagg
    11461 cataccggcg cgggtcgctt cttcgcggat gatgtcgcgg gcttggcgtt tggtacctac
    11521 gaacaatact gtacctttgt tggcaaccaa acgacgtacg gcttcttgcg cgtcttggaa
    11581 catcggcagg gttttttcca ggttgacgat gtggattttg ttgcgcgcgc cgaaaatgta
    11641 ttgtgccatt ttcgggttcc agaaacgggt ttggtggccg aagtggacac cggcttcaat
    11701 catctgacgc atagtaattt gagacatttt gatttccttg aaagggttaa gggcacacat
    11761 tcaatcgcat agaacttgat agaccgcgcc tattgtcaag cacccttcgg cgaaagtggg
    11821 cataagtttt aaaaaataaa agagtgtttc cgaaatggaa aactgacgga ttatagcgga
    11881 taagaggtcg tctgaaaagg gattcagggt tttgtgccgc tgtcttttta ccgttgtgca
    11941 cgctgctgtt cgaattctgc ctgttcctgt tgcttcatca ggcggttgcg gcggcggatg
    12001 gtcacgacaa agaccgtgaa cacggtgggc agcaccgccc aaaaaaccaa ataaatcaag
    12061 gcgcgcgcaa tactcggctg cgcggcggaa aacatcacgg caacaaaaag atagccgatg
    12121 gcgacaatgt gccacattgt gtgcgtcctg tttgaatgtt aacaaaatcg ttataatcgc
    12181 aacattctac cgcaatcctg aaaggccgtc tgaaatgagg aatgaggaaa aacgcgccct
    12241 gcgccgcgaa ttgcgcgggc ggcgttcgca aatggggcgg gacgtgcggg cggcggcaac
    12301 ggtaaaaatt aaccgcctgc tcaaacgtta tattaaaaaa gggcggaaaa tcggcgtgta
    12361 ttggccgatg ggcaaggaat tgcgtttgga cggctttgtc cgtgtcgcac aaaaacgcgg
    12421 cgcaaaactt tatctgcctt atatcgaacc gcgttcgcgg cggatgtggt ttacgccgta
    12481 tcctgaaagc ggaatggaac gggagcgcat acggggcagg gcgaagttga acgtgccgca
    12541 gtttgcaggg cggaaaaggc gtgtgcatga tttgaacctc ttgcttgtgc cagtggtcgg
    12601 tatggacagg ctgggctacc gtttgggaca ggcaggcggc tattacgatg cgacgcttgc
    12661 ggcgatgaaa taccgtttgc aggcaaaaac cgtgggcgtg ggctttgcct gccagttggt
    12721 ggacagactg tcggtcgagg cgcacgacct gccgctggac ggttttgtgt cggaggcggg
    12781 gatattgtgt ttttagccgt tcagacggca tttcgggcgg aaatgccgtc tgaaggtgga
    12841 atattgggag aaaaggatgt cggaaaagat aatactgccg gtcttgtcgt tgggtggcgt
    12901 acggctcgaa ccgttggatg tgcatcatga aacgggtttg cgcgaggcgg tttgcgatgg
    12961 ggaagtttgg aagctgggag taacgtccgt gccccatccg gatagggtgg cagactatat
    13021 cgggacagca ttggcaacgc gtttggcgtt tgcggttgtc gatgaagagg cgggcagggt
    13081 ggtcgggaca acggcgtatt atcattttga accgcagatt ccgcgtttgg atattggatt
    13141 cacatggtat gcggcatcgg cacggcggac acggataaac acctgttgca aaatcatgct
    13201 gttggattac gcatttgatg ttttggcttg ccgttgcgtg ggatggcgca cggatattct
    13261 gaaccttgcc tcgcaacgtg ccatcgaacg gctgggtgcg gaaaaagacg gcgtgctgcg
    13321 tatgcatatg ctccgtaaag acggcagtgt gcgcgatacg gtcgtgtaca gtatgctgag
    13381 ggaagattgg tgcaaaaaca gggaaatcct gaccggcagg ttggcagggt atggcgtgca
    13441 ggtgtgaggc agtattttca aatttatagt ggattaacaa aaaccagtac
//
LOCUS       DAWGBY010000043        13457 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.043, whole genome shotgun sequence.
ACCESSION   DAWGBY010000043 DAWGBY010000000
VERSION     DAWGBY010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13457
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.043"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(87..893)
                     /locus_tag="WHG62_001087"
     CDS             complement(87..893)
                     /locus_tag="WHG62_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ1725207.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILNR"
     gene            1113..2483
                     /gene="ffh"
                     /locus_tag="WHG62_001088"
     CDS             1113..2483
                     /gene="ffh"
                     /locus_tag="WHG62_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ1725208.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVVGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
     gene            complement(2814..3509)
                     /locus_tag="WHG62_001089"
     CDS             complement(2814..3509)
                     /locus_tag="WHG62_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ1725209.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
     gene            complement(3680..4339)
                     /locus_tag="WHG62_001090"
     CDS             complement(3680..4339)
                     /locus_tag="WHG62_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ1725210.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            complement(4542..4676)
                     /locus_tag="WHG62_001091"
     CDS             complement(4542..4676)
                     /locus_tag="WHG62_001091"
                     /inference="COORDINATES: protein motif:HMM:NF012801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ1725211.1"
                     /translation="MLGWNHKNVNITFAAANLLNQKYWRSDAMPGAPRTYTARVNYSF
                     "
     gene            complement(4686..6652)
                     /locus_tag="WHG62_001092"
                     /pseudo
     CDS             complement(4686..6652)
                     /locus_tag="WHG62_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261577.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(6838..7443)
                     /locus_tag="WHG62_001093"
     CDS             complement(6838..7443)
                     /locus_tag="WHG62_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ1725212.1"
                     /translation="MTRQSLQQAAESRRSVYSLNKNLPVGKDEVVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(7492..7890)
                     /locus_tag="WHG62_001094"
     CDS             complement(7492..7890)
                     /locus_tag="WHG62_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ1725213.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            7998..8909
                     /locus_tag="WHG62_001095"
     CDS             7998..8909
                     /locus_tag="WHG62_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ1725214.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAAGALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            8899..10200
                     /locus_tag="WHG62_001096"
     CDS             8899..10200
                     /locus_tag="WHG62_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ1725215.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAHPVAGIP"
     gene            complement(10268..10492)
                     /locus_tag="WHG62_001097"
     CDS             complement(10268..10492)
                     /locus_tag="WHG62_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725216.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVSAWVAVIWAYLMIESEKNGRY"
     gene            10595..12745
                     /gene="dinG"
                     /locus_tag="WHG62_001098"
     CDS             10595..12745
                     /gene="dinG"
                     /locus_tag="WHG62_001098"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ1725217.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELSFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGEFGIFIVRIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            12782..13396
                     /locus_tag="WHG62_001099"
     CDS             12782..13396
                     /locus_tag="WHG62_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ1725218.1"
                     /translation="MNFTRLLNQVLSTVQKKGGTFSDSPLNSFGGGALVAGIASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAKRRTIEQESGTDPETAAWLAAEYRLPASIEDIAAAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT         3274 a         3742 c         3432 g         3009 t
ORIGIN      
        1 cctttcctct ccctcctccg gctggtgcgc ctttgtgaat atgccgtctg aaactcgggg
       61 cttcggacgg catctgttgg ctcttcttat ctgttcagaa tgatttccaa tacgaacttg
      121 ctgcccatat aggcaatcat caggctgaca aatccgatga tggtccacac ggcggctttt
      181 ttgccgcgcc atgcggtcat gctgtgcttg agcagcagtc cgccgtaaat cagccatgac
      241 aatatgccga atacggtttt atgggtaaag gtcatgggtt tgccgaatac ggcttcggca
      301 aaaaatgttc cgctgacgac ggaataggtc agcaggatga aacctgccca catggcctgg
      361 aacatgagtt tttccaaact gagcagcgac ggcaggaatc ctgcgagctt ggagaagttc
      421 ctgcggtgca ggctccgatt cagcagcagg gtcaaaacgg acaataatgt tgcgatgccg
      481 aacagcccgt atgcaagcag cgaagttccg atatgcagca taaagggaag gtcggtaatt
      541 tcatatcccg agaattttcc aggaaaaacc aaacctgaca gcagcatcag tgcggcgcaa
      601 ggatacagca gcaactgcac tccgcgcagc ggataaaaga agctgccggc aaaataaata
      661 aacagcatca tccaaacaat caggctgccg gaatacccga agcccataat gatgattttg
      721 tcttgaatga ccggcataag cagtgccgcg ccgtggacgg tcaatgccgc gcccaaaacc
      781 ggcaattccg tcttccacgg gtaatcccgg ccgcgcccct gctgttggca gtgccatgca
      841 aatgcaccca atcctgcgta aaccgccgtc aaaaagatga aaactgtcgg catggtggac
      901 tttctctatc tatactgttg cgccgtctgc ggccgcttat gaaatattgg aacttttaac
      961 gttggaattg taaaatcccc gtttcgggca agccttgacg gatttgccga tatgctgtcc
     1021 ggcacacaag ccgcatcaaa ttattttgat tttattttaa caaagaatgc ccctgatggg
     1081 gcaagctatt cttattcaga ccaaggacca gtatgttaga caatttaacc ggccgcttca
     1141 gcaatgtctt caaaaacatc cgggggcagg ccaaactgac cgaagacaat attaaagagg
     1201 ccttgcgcga agtccgcctc gccctgcttg aggcggatgt cgccctgcct gtcgtcaaag
     1261 agttcgtcaa caacgtcaaa gaaaaggccc tcggtcagga agtggtgggc agcctgacgc
     1321 cggatcaggc atttatcggc gtggtcaaca aagccctgac cgagctgatg ggcagggaaa
     1381 acaaaacgct ggatttgtcg gttgcgccgc ccgccgtcgt gttgatggca ggtttgcagg
     1441 gcgcgggcaa gacgacgacc gccggcaaac tcgcccgcct gctgaaaaac gatcagaaga
     1501 aaaaggtttt ggtcgtatct gccgacgttt accgccctgc cgcgattgaa caactgcgtc
     1561 tgttggccga acaggtcggc gtggactttt tcccatccga taccaaccaa aaaccggttg
     1621 agattgcaac tgccgccgtc gattacgcca aaaaacattt ttacgatgta ttgatggtcg
     1681 ataccgccgg ccgtttggca atcgatgagg agatgatgaa cgaaatcaaa gcccttcacg
     1741 cggcggttaa cccggtggaa actttgttcg tcatcgatgc gatgctgggt caggatgcgg
     1801 tgaacactgc tcaggcattt aatgaagccc tgccgctgac cggtgtcgta ttgaccaaga
     1861 tggacggcga ttcgcgcggc ggcgcagctt tgtccgtgcg ccacgtaacc ggcaagccga
     1921 ttaaatttat cggtgtcggc gaaaaaatca acggcctcga acctttccac cccgaccgtc
     1981 ttgccagccg tatcctcggc atgggcgacg tattgaccct gattgaagac gttcaaaaag
     2041 gtattgatga agaagccgcc gccaaaatgg cgaaaaagct gcaaaaaggc aaaggcttcg
     2101 acctcaacga ctttaaagaa caaatccagc aaatgcgcaa tatgggcggt ttggaaaacc
     2161 tgatgtcgaa aatgccgggc gaactgggtc aaatatcgaa acaaatcccc gaaggtacgg
     2221 ctgaaaaagc gatgggtaaa gtagaagcca tcatcaactc gatgacccct aaagaacgcg
     2281 ccaaccctgc cctgctcaaa gccagccgca aacgccgtat tgcaatgggt gcgggcacga
     2341 ccgtacagga agtgaacaaa ttgctcaaac agtttgaaca aatgcaacaa atgatgaaga
     2401 tgttcagcgg caacggcttg ggcaaactga tgcgtatggc gaaaggaatg aagggaatga
     2461 aaggaatgtt cccgggtttg taagccgatt tgaccgaaaa cgccgtctaa aatttcagac
     2521 ggcgtttttg ttttatattc tgatttatag tggattaaca aaaatcagga caaggcggcg
     2581 agccgcagac agtacagata gtacggaacc gattcacttg gtgcttcagc accttagaga
     2641 atcgttctct ttgagctaag gcgagccaac gccgtactgg tttttgttaa tccgctatat
     2701 attctgattt aaaaccataa ggctttaagc aatcatctct tctataaagc ctaaatacaa
     2761 aaggccgtct gaaatcctat tttcagatgg cctttactca ttcaatcctc aacttattgc
     2821 ggctttttct gctcttcgcg tactttatcc accaactggt caatcgtggt cataccggac
     2881 tgccagtctt taaattcaac ttggtatttg ccgccgacaa tcacagtcgg tgtgccgctg
     2941 atttggaatt tattggtcaa ctcttccatt tgagccgcac gcgcttggct ttcaggagcc
     3001 tcaaatgcag ccaatacttt tttgccgtca aacgctgttt gctcggacag ccattttttc
     3061 agggtatcgg tatcggccag attgattttt tgattaacca tcgcatcgaa aatatggctg
     3121 ttggctttat ctgattcacc ggccatttcc actgcggccg ccaaacgtgc caaaggtttc
     3181 atttcatcac cccacacgac atgctcccgg cgcatatagg tatcgtcttt aaacgttttg
     3241 atgtgctcgc tcaagaccgg ctcaagatgg gcgcaatgcg ggcagaagta gccgaaaaat
     3301 tccaatactt cgattttacc ggcctgctgt tgcggaatag gcgtagacaa tacagtgtag
     3361 ttcacacctt cgttcaactc agcaggggct gccggagcag atgagctgct ttgggcgctg
     3421 tctgccggaa cactggtttc agcctgtttg ctacaagcgg ccaatgccaa cagggtcaat
     3481 gaagtcaaag ctaaggtttt cagtttcata ggtatctctt gtgtgtcaga ttaatgtgcg
     3541 gattttatgg cattttattg aaggcgtgtt cgatttgagt gaaaaaatgt gtttagtttt
     3601 atttcagcct ttataaaggc cgtctgaaat atggcttaga taattagcct tattttcaga
     3661 cggcctttgt tctagtaatt tacggtttcg gacattttgt cttcaatccg tcgatgtgtt
     3721 ccattaagtc aggtgggaca tgattccaca taggatcaag aataaaatcg ataccttccc
     3781 gtctggctaa tttggctgct gggacaaaat cggaatcacc agaaaacaag atgattttat
     3841 cggcttgttt ttttaaggta atagatgaaa tatccaagcc tatacgcata tctacacctt
     3901 tttgtttaac atcgagcacg acatcgtttt ccgtaatttg agttgacggg tttttcagaa
     3961 gatttttcat gacttggggt tttaatatcc atgctgtatt gtccgacagc ttgcctaaac
     4021 gtaacgctaa tttacgcttc ttcttcaatt cggtatgcag attgcaacga aatatggctt
     4081 ccggagtctt tgaaaaatct atggcacgat gagatacggg attgtgcatt ttcttttcaa
     4141 acggcacgca gtcgtaaaag aaaattctat ataaatcatc catttgatct gtgccgttga
     4201 ttttatcttt cagatgcagc atcgaatatc ggaaagccaa atcagcaatt ctttttgcat
     4261 cgtgtggatt ttgagacagg cctaatgacc gtacccgctt aataaaaaat gcaccgtcaa
     4321 tcaaaatggc ggttttcata ttgcttcccc tatatttgtc aaagatataa aaaagccctt
     4381 gggatcggca tacccgctat gatttaatgg gtaatgcgta ctgccaaggg cgctatttct
     4441 ttttggatta tactgatgta gataaagcct gtcaaaaagt tcgtgtgctg aatttacgga
     4501 ttatcaggat tttcagacgg cattctgttg cacgaacggg attagaaact gtaattaacc
     4561 cgcgccgtat aagtgcgcgg cgcgccgggc atggcatccg aacgccaata tttttgattg
     4621 agcagattgg ctgcggcaaa ggtaatgtta acatttttat ggttccagcc aagcatggca
     4681 tcaactcagg caaagcctgg aagcgtagtc acttctttat ttcttgagtt gtaaccgtag
     4741 cgtttgcctg taccggttac gccgatttcg ccgtagaggt tttcggtcgg ggtataacgg
     4801 aaaaacaggt tgccggtaac gttgctggtg ttattcaaat ggatgcccac tcggtcggga
     4861 ttttctttgt cttcaacgac tttcgcctga atcacgccca acgaaccgcg cagatagagt
     4921 tttttgggga tgatttgccc gatggcggac aattccacgc cacgcgaacg gtgtttgccg
     4981 ccgactgccc aagtgtaggg attattttgt gcgtcggggc ggtagcggat attgaagcgt
     5041 tcgatttggt aggcggacaa tgtggtgctg aggcggtcgt ccagccaact gcttttcaca
     5101 ccggtttcgt attggcgggt gtactcgggg tcagcgttga acacggcaga agatgacgta
     5161 tcgatgctca aatagccgcc gcgtccgcca taaggcgcga aacctttgtt atacgaggcg
     5221 taaagtgtgt gaacggggtt gatgttccac actgcgccga tgttggggct gaacgagtgg
     5281 ccgctgtact ggcggctgct gccggtgagt ttgttttcgg aattaaaggt gtatttgtcg
     5341 taacggccgc cgaggacgaa tttcaaatcg ggcgtggcgg agaagatgtt ttgcacaaag
     5401 atgccgtagg agtcggcttt gtggcggttt tgggtgagga taggctgcaa tctgcccgaa
     5461 gccggccagc ttgctcggtc gtatggatcg atggaagcag taaaggcgcg gctgtaacct
     5521 aaggtcgggt tgcggtgttc gcggctgtaa tccatgccta cggtcaagtg gttttcaaaa
     5581 cggccgatgg tgtagtcgcc gtttagcgtg aaattggacg acagggtttt gttgtcggtc
     5641 tgctgccagg cgtagttacg tttgattaag ttgccatttt cgctgcctgc atagaaatga
     5701 tcaaaatcct gcgccgccgt gcggtgggcg agctgccatt gggcacgcca tttgtcgttg
     5761 aaggcgtatc aaggtcggag cgccaaactt gcagcttgtc tttgacaaaa tcgttccggt
     5821 gggcgaaccc catgcggtaa ggcagtccga agcggtcgta cacggacttg gtcggactgc
     5881 ggtcgggcgt gcgctccaca ttgtcgtagg tgtattgccc cgtccacttc aagccgttgt
     5941 cgagtttgac ggtaatgctg ggcgaaacca tgacattttt gctgtctatg ccgctgcgga
     6001 acgaattggc gcgcccgact tcgccggtga gacggatggc gacgtttttg ttcaacactt
     6061 cgttaatgtc catattcagg ctgcggtttg cccacgaacc gtaaaccgca ccgatgttgc
     6121 ggctttgttt gaagttggcg tatttgctga ccatgttgat gacgccgccg ccgttggtgc
     6181 ggccgtaaag cacggaagac gggcctttca ggatttccac gcgctcgatg ttggcagtac
     6241 tgcggcgcac ttgtccgctt tcgcgcacgc cgtcgcggta aatatcggat gcgtcggctt
     6301 gaaaaccgcg caggaaaatg ctttcgccgc gcatatcgta ggcagcgtcg atgccggcat
     6361 tgccttcgag gatggaactc aaatcgttcg taccgtaatt tttgtttttc tggatattga
     6421 gcgtatcgat ggtttgcggc gtttctttga tgagctgtcc gttgcgggta acggcggctt
     6481 cgtcgtagtt gatgtagcct ttgagtacgc tggtgtcgga ctgtccgacc acggaaacgg
     6541 tgggcagagt ggcggtgtaa tgttcaccat tgtcctgcgt atcggcggca gcaacaggga
     6601 aggaagcaat aatcagcgtg ggtaataaag ctaaatgaaa tgatattttc atttttatac
     6661 tcaatttaac aaaacaaccg aattatattg cctcacggag gaaatgagaa taatttcttt
     6721 taactatatt gaacatgata tttgtaaaca aaggtctcag aatgcggaaa actcgccgcc
     6781 tgatactgaa aaatgccgtc tgaacagggt tcagacggca tttttttgac cgcgaaatta
     6841 tgcgccgaac actttcaaac gttctgcaac gggttcaaag gtcttttcac ctgccgcccc
     6901 ttcaataccg ccgataacca tttgtgcgcg caacaaccag ttttcgggga tattccacgc
     6961 tttggcaatc gccgcatcgg gcaagggatt gtaatgttgc aggtttgcac ctacgccgac
     7021 cgcggcaagt gtcgtccaaa cggcatactg caccatagcg ttcgcctggt ccgcccaaac
     7081 gggaaagttg gcggcataag cagggaactg ctcctgcaaa cctttgacaa cattttgatc
     7141 ttcataaaac aaaatagttg ccgcacccgc cttaaacagg ttcaattttt gcgcggtcgg
     7201 ttcaaaactg tcggcaggca cgacggcacg caacgcgtct tcgacaaatt gccacacctt
     7261 atcatgctct tcgccaaaca gcacgaccac gcgggcagat tgggaattga acgaagaagg
     7321 tgtgtgcaaa acggcgtgtt cgacgatttg gacaacttca tctttgccga cgggcaggtt
     7381 tttatttaac gaataaacgg aacggcggct ttcggcagcc tgttgcagag attgacgggt
     7441 catttctttt cctcaaaaac attcaacaaa atacacttta ggcagtccgg ttcaggcttt
     7501 acgcttgaaa aacagcctgt ccagcgacca tgctccgccg cccgctgccg cgatatagag
     7561 gaatacgaag cagaacagca ctgcggactc gccgccgttg gcaatcggga acaaagcatt
     7621 tccggaagcg tgcgccataa aataggcaac cgccatctga ccggacaaaa caaacgcggc
     7681 agggcgcgca aacaggccca acaccagcaa aatgccgccg acaatttcta aaataccggc
     7741 aagcagcaac agcccgccgg gcgaaccgct gcccatttca atggggaagg cgaagatttt
     7801 cgacgtaccg tgcaacaaaa acaggtaggc ggttacgata cgcaaaacag aaagcaaaac
     7861 cggttggata cggttgcagc aatcggacat aaaagctcct ttgatatttg tcttcatttc
     7921 aggcggtaga gtatagatgt ttcccctttt caaatatata ctgcttttat tgatacaact
     7981 tttccacaca agaaaatatg gacaccctgt tcagcctcaa ggttttccgc caagtcgtcc
     8041 aaagcggcgg cttcacccgc gccgccggcg cgctcggcat ctccaccgca atggcaagca
     8101 aacacgtcag ccacttggaa aacaccgtcc aagccaaact cctgcaccgc aacagccgca
     8161 acctcagcct gaccgaagcc ggggaagaat actaccggca atgcagttac gcgctcgaca
     8221 cgctcgacga tgccgcgcaa aaagccgccg gggggacgga aaaaccgcag gggctgctgc
     8281 gcgtaacgat gccactgtgg tttgccggca gccagatatg caactggctg gcggaatacc
     8341 gcgaacgtta tcccgaagtg acattagaac tgattttgga caaccgccac gtcgatttga
     8401 ttgccgaagg cgtggatttg gcgttgcgcg tttcccaaac cctgtccccg tcactgattg
     8461 cgcgcccact ggcggaaatc gaatttgccc tgcttgcctc gcccgacttc ctgaggcgca
     8521 acggcgtgcc ggaaacgccg gaagaagtgg cggggctgcc cgccgtcctg ccgacctaca
     8581 ccaaccagca gaaactcgac ctcacccgca aatcggacgg caaaaaatac cggcttgaac
     8641 tgacccccgt catccgtacc gacaacacgc tgatgatgcg cgaaatgatt aaggcgggcg
     8701 cgtgcatcgg ttatcagccg ctttgggcgg cggaacacga tttgcgctgc ggcacgctgg
     8761 tgaggctgct gcccggatac gccgtcccga ccgaccggct gaatgccgtt tatgcagaca
     8821 gggcattctt aagcgcgaaa gtccgcagct tcatcgattt tctgaacgaa aaaatcgcca
     8881 gcaggaaagg ctgccgaaat gccgtctgaa accgcccgcc ccctttatgc ggacacgtgc
     8941 gccgcacaca cgctcgtctg gttccgccaa aacctccgca tccgcgacaa cgccgcctta
     9001 tgcaccgccg ttgccgaagg tttgcccgtt atcggtattt ggattgacga tgccgaaaca
     9061 gacaaccctc gccgcgccgc gttctaccgc caatccgccg ccgaactcgc ccaagggctt
     9121 gcagggcgcg gcatcccgct ctacacggcg gcatcgcctg ccgagctcgt ccggctcgcc
     9181 gtccgcctca atatccgcgc cgtcatcgcc gacgaatccc atacttttgc cgacaaactc
     9241 gccgacaacg ccctttggca tgaattggac aaacacggca tcgcgttaac cttcgtcaat
     9301 gaccgcgccg ttttcggcaa aaccgacctg atacccgacg gcggcacggc acacaccgat
     9361 ttcgaccgct accgcgaagt atggctcgac cgcttttcca agcagccccc cgccggtccg
     9421 gacctattcg cggcataccg ccaacccttc cccgaaaacc tttccgcccc gccgcctgcc
     9481 gccctttcag acggcatctt cctgccgcaa aacagcggcg aaacggcggc ttggcggcag
     9541 tggcggcggt ttctcgaaca ggcggattcc tactccgttt taaaggattt cccctcgcgc
     9601 aaacacactt cgctgatggg cgcgtatttg agtgccggct gcatctcgcc gcgcctgctc
     9661 gcgcgggaaa gcctcgaacg ccgtctgaac gcgtgggcgg acaacatcat ccgccgcgat
     9721 tttttccttc aacttgcctt gcagcacacg gatgacgacc cttcagacgg caatcctgaa
     9781 cacaccctgc gcctgacgct ttggcagcag ggccggaccg gcattccgat tatcgatgcc
     9841 gcgatgcgct gtttgcacaa aaccggcagc ctccaccccg ccctgagacg cttgagcgcg
     9901 gattttttct gccacgtttt aaacctcccc cgccgcgaag gcgagatatg gtttgcccgg
     9961 cagctgaccg atttcgatgc ggcaatcaac caaggcaact ggtggcttgc cgcctcacgg
    10021 cacacctgcc ccgacattgc cgccgcctca taccgtaccg acccggacgg tacttttatc
    10081 aaacggcaca ttcccgaact cgcccacctg tccgccgaca ccgtccacac gccttggcgg
    10141 tttgcctgtt cggtcgatac ccacggctat cccgcccatc ctgtcgccgg tattccctaa
    10201 gcggtacggc aacctaaaac aaatgccgtc tgaacttccg tttcagacgg cattgcgtcc
    10261 gaatgactca atatcttccg tttttttcac tttcaatcat caggtatgcc caaatcaccg
    10321 ccacccaagc cgacaccgtt cccatcgccg gcaaaaaatg ctgccaatcc gtcatcggcg
    10381 gcacagggca acggccgcat tcgatttccg cgccgcccaa caaccggtac agcaacatat
    10441 ccgcaatcca aagcaacaac gggtatttca aacgctgcaa ccaaaaaacc aaccacgtcc
    10501 gcacgattca cctcaccccc cattccgaca acgatattgt accgcttccg tgcaatgtta
    10561 aaataagccc acttctaccg ccgtacaaaa cgccatgctc accgatttag aaaaaaacgc
    10621 catccgcgac cattaccaaa acatcggcaa aaacctgccc ggtttccgtc cgcgcgcttc
    10681 gcagcgggaa atgattgcgg cggttgccaa cgctttttcg cggacgttgg cgcgcgaaga
    10741 aggcggcgag ccgcccaagc gcgagggcga gagcatcgcc gtaatcgaag ggccgaccgg
    10801 cgtgggcaaa tcgcttgcct acctgctggc gggcggcatc atggcgcaga cgcgcggcaa
    10861 gcggctgatt gtgagcagcg caacggttgc cttgcaggag cagttggtag accgcgacct
    10921 gccgtttttg gtcgaaaaaa gcggtttgga actgagcttc gcgcttgcca aagggcgcgg
    10981 ccgctatctc tgcccctaca aactctatca actgacgcaa agcaatgccc agcaaaacct
    11041 gctcggcttt gaagcccccg ccgtcttgtg ggacagcaaa cccaagcccg aagaattgaa
    11101 gctgctgcgc gacattgccg acgaattttc tgcccgacgg ttcaatggcg accgcgacgc
    11161 ctggccggaa aaaatcgacg acgcgatttg gctcaaagtg accaacgacc gccacggctg
    11221 cctgaaaacc gcctgtccca accgtccgga atgtccgttt tacctggcac gcgatgtctt
    11281 ggaaaccgtc gatgtcgtcg ttgccaacca cgatcttctg cttgccgaca tcagtatggg
    11341 cggcggcgtg attctgcctg cgcccgaaaa cagtttctat tgcatagacg aagcgcacca
    11401 cctgcccaaa aaagccctca gccgttttgc cgccgaacat tcatggaata ttgccgtttg
    11461 gacgctggaa aaactgccgc agctgaccgg caaaattgcc gcgcttaccg ataaagccga
    11521 acttgccaac ctggccgacg aagccgccgc atccttgctc gacagcctgc acgaatggca
    11581 gttccatttg gcggaagagc cgtctttaag tatggggccg tctgaaaacg acagacgaac
    11641 caacagcgaa ccgacttggc tgtgggaaga cggcaaaatc cccgaaggcc tcgaaaccac
    11701 cgtttccaat acggccattg ctgcgcgcag cctgctcaaa cacgttgtcg ggctgaacga
    11761 tgcgctttcc gccgcgcgcc gcgaaaaaga acaggacggc gcgctcctcg accgcctgac
    11821 cggcgagttc ggcatcttca tcgtccgtat cgaacaaatc agcgcggttt gggatttgct
    11881 ctccaccgtc cccctcgaag gcgaagagcc gctggcaaaa tggataaccc gccgtgccga
    11941 cgacaaaaac gactacattt tcaacgccag ccccatcagc agcgcatccc accttgccaa
    12001 cagcctgtgg cggcgtgcgg caggcgcggt attgacttcc gccaccctgc aatccttggg
    12061 caacttcaac ctgatgctgc gccaaaccgg gctgcaatgg ctgcccgaaa ccaccaccct
    12121 cgccctcaaa agcccctttg actttgaaaa acagggcgaa ctctacatcc cccccatata
    12181 cgccagcccc aaagaccccg aagcccacac cgccgccgtc atcgaatggc tgcccaagct
    12241 tatttcgccc accgaagcca tcggcacgct cgtcttgttt tcctcgcgca aacaaatgca
    12301 ggatgtcgcc ctgcgcctgc ccggagacta cctgccgctc ttgctcgtac aaggcgaatt
    12361 acccaaagcc gtcctcctgc aaaaacacca ccgggccata gaagaaggca aagccagcat
    12421 catcttcgga ctcgacagtt tcgccgaagg actcgacctg cccggcaccg cctgcgtgca
    12481 agtcatcatc gccaagctgc cgtttgcgat gcctgacaac cccatcgaaa aaacccaaaa
    12541 ccgctggata gaacagcgcg gcggcaatcc ttttattgaa atcaccgtcc ccgaagccgg
    12601 catcaaactc atccaggccg tcggccgcct catccgcacc gaacaagact acggccgcgt
    12661 aaccatcctc gacaaccgca tcaaaacaca gcggtacggc caacaattat tggccggcct
    12721 gccgccgttt aaaaggatag ggtaaacata ccgcccttcc cgcaacagaa aggaaaaatt
    12781 catgaacttt acccgactgc tcaaccaagt cttaagcacg gttcaaaaaa aaggcggcac
    12841 attctccgac agcccgctca attcattcgg cggaggcgcg ctggttgccg gtatcgcctc
    12901 catgctgctg aacggtaaaa accgcaaaac cattaccaaa atcggttcga ccgccgcttt
    12961 gggctacctc gcctaccggg gctatcagat gtggcagcaa aacaaagggc gggcaactgt
    13021 aacacaaagc gatttccaac ctgccggaga aactgaagaa acatacagcc gcaccgtatt
    13081 gcgcaccatg atagccgccg ccgcttcaga cggcatgata gacgaagcca aacgccggac
    13141 tatcgaacag gaaagcggca cagaccccga aactgccgca tggctcgccg ccgaataccg
    13201 cctgcccgca agcatcgaag acatcgccgc cgccgtcggc aacgatgagg cgttggcggc
    13261 ggaggcctat ctggcggcaa ggttggtctg tgccgatttg tcgcggaaag aaaccgtctt
    13321 cctcgcccgc ctgtcgcagg ctttgaaact ggatgacaat ctggtggaga gtttggaaag
    13381 gcaattgggg ttttgatgac acagccgggg agggaaaatc atcaaaaaac ggttattccg
    13441 accccggcct caaaacg
//
LOCUS       DAWGBY010000044        13379 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.044, whole genome shotgun sequence.
ACCESSION   DAWGBY010000044 DAWGBY010000000
VERSION     DAWGBY010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13379
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.044"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(76..1497)
                     /locus_tag="WHG62_001100"
     CDS             complement(76..1497)
                     /locus_tag="WHG62_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ1725219.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1855..2214)
                     /locus_tag="WHG62_001101"
     CDS             complement(1855..2214)
                     /locus_tag="WHG62_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ1725220.1"
                     /translation="MIRYLLIACGGISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2211..2816)
                     /locus_tag="WHG62_001102"
     CDS             complement(2211..2816)
                     /locus_tag="WHG62_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ1725221.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDKELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGIVQIAPFHPDFQFEGTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2863..3345)
                     /locus_tag="WHG62_001103"
     CDS             complement(2863..3345)
                     /locus_tag="WHG62_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ1725222.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3549..3646
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3855..4955
                     /gene="gcvT"
                     /locus_tag="WHG62_001104"
     CDS             3855..4955
                     /gene="gcvT"
                     /locus_tag="WHG62_001104"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ1725223.1"
                     /translation="MTALKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVNNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQQA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALVA
                     LKEKGVAVKQVGLLLDKGGILRAHMEVLTDKGQGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEVDVRVLKLPFVRNGQKQFD"
     gene            5117..5503
                     /gene="gcvH"
                     /locus_tag="WHG62_001105"
     CDS             5117..5503
                     /gene="gcvH"
                     /locus_tag="WHG62_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ1725224.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            5650..6897
                     /locus_tag="WHG62_001106"
     CDS             5650..6897
                     /locus_tag="WHG62_001106"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ1725225.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            7174..7599
                     /locus_tag="WHG62_001107"
                     /pseudo
     CDS             7174..7599
                     /locus_tag="WHG62_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            7605..8834
                     /locus_tag="WHG62_001108"
                     /pseudo
     CDS             7605..8834
                     /locus_tag="WHG62_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777561.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            8892..9511
                     /locus_tag="WHG62_001109"
                     /pseudo
     CDS             8892..9511
                     /locus_tag="WHG62_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231945.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            complement(9504..9605)
                     /locus_tag="WHG62_001110"
                     /pseudo
     CDS             complement(9504..9605)
                     /locus_tag="WHG62_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9601..9732
                     /locus_tag="WHG62_001111"
                     /pseudo
     CDS             9601..9732
                     /locus_tag="WHG62_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            9729..10223
                     /locus_tag="WHG62_001112"
     CDS             9729..10223
                     /locus_tag="WHG62_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ1725226.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(10311..11972)
                     /locus_tag="WHG62_001113"
     CDS             complement(10311..11972)
                     /locus_tag="WHG62_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ1725227.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GVGKDGGPTDSFQPGMELWAQQTLFAEGCRGSLSKQVIEQFKLDQNSEPQTYGLGIKE
                     IWEVPSEKHQPGLVMHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGFQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLEHLEEAEGFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFEWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIIE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(12102..12557)
                     /locus_tag="WHG62_001114"
     CDS             complement(12102..12557)
                     /locus_tag="WHG62_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ1725228.1"
                     /translation="MNNFHGQKLTEEDVLKKLDKEQMRASFEDMRRIMPDLGFEAKGY
                     ALSFEQLAQLQIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSMSRAQFLDAW
                     QTREGNLAGKILAVVPKGRDAGGDKAFFTRSPKRQTEFAIGQVKWWRAY"
BASE COUNT         3306 a         3390 c         3567 g         3116 t
ORIGIN      
        1 tgtcggaaag gaaaaatatt gatttgatta tgccggaatt taaaatgccg tctgaatgtt
       61 cagacggcat agcgtttaca gcagtttgaa aacgaaaaag ataagggtat gtacgatgaa
      121 gacgggtgtc aggaaggcga ccgaccacat catatagccg aagaaagtcg gcatcggtac
      181 gccgcgctgt tcggcaatgg ccttgaccat gaagttcggt gcgttgccga tgtaggtcag
      241 tgcgcccatg aataccgaac ccatagaaac cgccagcagc gaatgaaaca gggtacccgt
      301 catcaaggct tgggcatcgc cgcccgccat attgaaaaaa acgagataag tgggcgcgtt
      361 atccaagaat gccgacaata tgccgctcat ccaaaaatac atcacattaa tcggatgacc
      421 tgccgtatcg tgaaccagcg ataccacccc gcccagcgcg cctgcctcgc ctgctttcag
      481 aatgctcagg acgggaaaga tggtgatgaa gatgccgagg aagagtttgc ccacttcggc
      541 gatgggttca aagttgaatt cgttgcctgc gcggacttgt ttgggcgtga ttgccataga
      601 tacggcggtc aatgcaatca ggatgacatc gcggacgagg ttttgcaggg cgtaacggct
      661 gccgaggatt tcaaatcccg ggtgttcggg tttccaaagg ccggacatta gaaccgcgcc
      721 gaccacgccc gaaagcagga ggaagttcca tttgccgaag atggcgattt tttcgggttt
      781 ttcctgttgt gccggcgtat cttgtgcaat gctttcctgt ttgaagaaac ggttgtcgat
      841 gaaatagaag gcggtcaaca ggacagcggt gctgatcagg acgggggcga acatatgttt
      901 gaccgtccac atgaaatcta cgcctttgag gaagccgagg aagagtgggg ggtcgcccaa
      961 aggggtcaga ccgccgccga tgtttgcaac caggaaaatg aagaagatga cgatgtgtac
     1021 gcggcgggta cggttttggt tggctttcag cagcggacga atcatcagca ttgctgcgcc
     1081 ggtcgttccc atgatagagg caagtgccgt accgacggca agcagggcgg tgttgagctt
     1141 gggtgtgccg ttcaagtcgc cccaaaccaa aatgccgcct gaaatggtgt acagggcaag
     1201 cagcagcagg atgaaaggga tgtattcttc aacgagtgcg tgtgcgacgg tatggatacc
     1261 ggcggacgcg ccaaaaacca aactgaacgg gatgaggaag agcaatgtcc aaaaggcggt
     1321 gattttgccg taatggtgat gccaggtatg cgaaaaaaac aagggaccca atgcgataga
     1381 cagcaaaatc agggcaaagg gcaggctcca cagcaggttt aggtttgcgc cgtccaaatc
     1441 tgcggcgtaa accgatgcgg ggaaaagcat tagtgaaaac aggggtaggt ggcgcatcgt
     1501 gtttcctcga ttcaagcact gccttgcgcg gcgcgtggga gtgatacagg caccgtgccg
     1561 cccggacata ggcggactgt gctgcctgtt tgtttttgaa aaaagttttc cgattgattg
     1621 taaagtaaat aatcaggata aaccagtttc ccaaaccgga aggcggcggg aaggcggatt
     1681 gctgtgcttg ggaatatatg ttctttttga taaataattt tatttaaaac aaataaatat
     1741 atgtctttaa taaataatct atcgaaaacg aaaaatgaat ttattttaac atatatttgc
     1801 aatgaaacag gtttgccccc cgtttgtttg cccttatccc tttcagtacg gcattcaaga
     1861 ttcgggcctg cgccacatcc atatggcgac aagggaacaa aaaaccgatg aaaccgcccc
     1921 gacccaccag cgttggggaa actgccaaaa cattatcagg caggatgcgg tcatcatact
     1981 gatggcgaat attttggctt tgcgcggcac tgcgccgttt tgttcccagt tatgaaccat
     2041 cggaccgaaa tagcggtgcc ggtgcagcca gcggtgaaag cgcggggatg cctttgccca
     2101 gcaggcggcg gagagcagta cgaacggcgt ggtcggcaac agcggcagaa aaatgccgat
     2161 gattcccaac agcagggaga tgccgccgca ggcaattaaa agataacgta tcattttgaa
     2221 atatttttct tattgtgcgg ataagggcag gatgtgatac cgagttttgc ccagccttca
     2281 tgtcccattt tttccagcag ggcgatattg cgttcgaata ttgccgaagc gtcgggaaag
     2341 gcttgtgcgg ctttggcaat gctgtcttcg cggatgaggt gcagcgtcgg atagggagaa
     2401 cggttggtgt agttgccgat gtcgtctgaa tccgtgcctt caaattggaa atcgggatga
     2461 aacggagcga tttggacgat gccttccaag ccgttttcga caacggcggc atcggcaata
     2521 tcgagcatat cgttgaatac gtcgaaatcg gggaataggg tcgggtgaac cagcagggtg
     2581 gtttccagtt cggtggcggg tgtattgccc agtcgctgca gttctttgtc caagtcttcc
     2641 aaaaaaccgt caaggtgttt ggcttcgctg atcgcgatgc ggacaaggtt tttaacgtgg
     2701 ggggctttgg caaagggaca caggttcaga ccgatgacgg ctttttccaa ccattgtccg
     2761 gtgtgttcgg caacagcatc tttattttcg gaagtattga tattcattat tgtcatgtaa
     2821 atgtgtttgc agattgcacg tgcgggaaaa tcgggaaggg cactattcct tcagcaggtg
     2881 gttgagcggc agggaggtgg tgtgtttgat ttcttttaaa acaaagctcg attgcgcatc
     2941 ttgtacgccg tggtgggaca ggagcgtatc caaaacaaaa tgggaaaacg cgttcatatc
     3001 ggtaaaaaac gcctgaagca ggtagtcggt ttcccctgtc agggcgaagc agctcaagac
     3061 ttcaggccat tttcggaccg atgcggcaaa gtcttcccgc gcgtcttttg ctttgcggat
     3121 ggaaacgcgg ataaatgcct gaagccccag gttgacggat tccggagaca gcagcgcggc
     3181 atattggcgg acgatgccgg catcttccaa ctgcttcaga cggcgcaggc acggagaagg
     3241 cgaaagtgcg acacgttcgg acagttcgac attggtcagc ctgccgtttt cctggagaac
     3301 ctgtaagatt ttaatatcgg ttttgtctaa agtgagttgg ggcatatttg cgttccgttt
     3361 taaggaattc ggattgtctg tccgtatgtt tgcggcaatc cgcacagatg gagaccatat
     3421 taacatataa aaagttatac cgtcatccgg gacaaatttt gttttcggaa aatcatgtga
     3481 aaacagaggc ggtcggtttg catctctttt aagacggctt gcccaaaccg ccgattcaag
     3541 acataatcgg gaaatgtgca ggagagtgtt acacccaact acaatgtaac caccgaaggc
     3601 gcagacaccc ttaaatcgct caggtatcag ggactgcaca ttgaaacaaa caatctggag
     3661 agcggcgttg gaataacgtc caccgaaggg gagaaggccg tctgaaccac cattcagaca
     3721 accgcgcaaa gcagtgagca gactggtttg ccatcatgcg gatacggccg aaaatctcag
     3781 gttcaaggac agatagggtc atccgcgcat cttgtgcgga cggcatctga acaataaatc
     3841 cagagaagct gagaatgact gccctgaaaa ccaccccatt tcatcaagcc catcaagatg
     3901 caggcgcgaa gctggtagat tttgccggct gggagctgcc catccattat ggttcgcaaa
     3961 tcgccgaaca cgaagccgtg cgcaccgacg caggtatgtt tgacgtatcc catatgcttg
     4021 ttaccgacgt agcaggcgca aatgccaaag cctttttccg caaattgatt gccaacgatg
     4081 tcgccaaact cgcttttgtc ggcaaagccc tttattccgc tttgctcaac gacaacggcg
     4141 gcgtgattga cgacttaatc gtttaccgca ccaatgaagc cgaaacccaa taccgcatcg
     4201 tgtccaacgg agcgactcgc gaaaaagaca cggcgcaatt ccacaaagtc ggacaagagt
     4261 tcggcgttgc ctttaatccg cgctacgacc tcggcatgct cgccgtacaa ggcccgaaag
     4321 ccatcgagaa actcctgacc gtcaaacccg aatgggcaga tgtcgtcaac aacctcaaac
     4381 cgttccaagg cgcggatttg ggcaacgact ggtttgtcgc ccgcaccggc tataccggcg
     4441 aagacggcgt ggaagtcatc ctgcccggca ctgaagccgt cgcattcttc aaagccctgc
     4501 aacaagccgg cgtacagccc tgcggcctcg gcgcgcgcga taccctgcgc atggaagccg
     4561 gtatgaacct ctacggcaac gatatggacg acgataccag cccgctcgaa gcaggcatgg
     4621 gctggacggt tgacttgaaa gacgaaagcc gcgacttcgt cggtaaagcc gcattggtgg
     4681 cattgaaaga aaaaggcgtt gccgtcaaac aagtcggttt gctgctcgac aaaggcggca
     4741 tcctgcgcgc gcatatggaa gtgttgaccg acaaaggcca aggcgaaacc accagcggcg
     4801 tattctcgcc cagcctgaag caatccatcg ccatcgcccg cgtgccgaaa gactttgacg
     4861 gcgataccgc caaagttctg attcgcggca aagaagtgga cgtacgcgta ctgaagctgc
     4921 cgtttgtgcg caacggacag aaacagtttg attgatgcgg tttcagacgg cattttcatt
     4981 tcatatgccg tctgaaagca ggttttaatt gttgtccgat acggacgttt gtagaaagca
     5041 ttgaacaagg catctgtgga tattgattca tgcagatgcc gtctgaaaat aacccctatc
     5101 aatggagtat caaaccatga gcaacaacat cccggccgaa ctgaaatacg ttgccagcca
     5161 tgaatggctg cgccttgaag aagacggtac gattaccgtc ggcattaccc accacgcgca
     5221 agagctgttg ggcgacatcg tgttcgtcga gctgcccgaa gtcggcgcga accttgccgc
     5281 tgaagagcaa gccggtgtgg ttgagtctgt aaaagccgcg tccgacgtgt acgcaccgat
     5341 tgcaggcgaa gtcgttgccg tcaacgaaga tttgccaagt gctccggaaa ctgccaacag
     5401 cgattcttac ggcgcaggct ggttcttcaa aatcaaacct gtcaatcctg ccgattacga
     5461 cggtctgctg actgccgaac aatacgcggg cgaagtggac taaatctcta tcctgataat
     5521 gggatgactg atttgagaaa ctgcactttc agacggcaag gatgcgtttg gaagtgcagt
     5581 ttttgtctgt gtcttcaaag ttcagttagg ctataataac ggtctatatt catctttacc
     5641 gattttttca tgcaacttac cgctgtcgga ctcaatcatc aaaccgcacc tttaagcata
     5701 cgggaaaagc tggcgtttgc cgccgccgcc ctgcctaaag ccgtccgcaa tcttgcccga
     5761 agcaatgcgg caacggaggc ggtaatcctt tctacctgca accgcaccga gctttactgt
     5821 gtaggcgatt cggaagaaat catccgatgg cttgccgatt accacagttt gccgattgaa
     5881 gaaatccgtc cgtatctgta cgcgctggat atgcaggaaa ccgtgcgcca tgccttccgc
     5941 gttgcctgcg gcttggattc gatggtgttg ggcgagccgc agattttagg acagattaag
     6001 gatgcggtca gggttgctca agagcaggaa agtatgggta agaaactcaa tgccctgttc
     6061 caaaaaacct tttctgttgc taaagaggtc cgtaccgata ctgccgtcgg cgaaaactcg
     6121 gtttccatgg cttccgcttc cgtcaaattg gcggaacaga tttttcccga catcggcgat
     6181 ttgaatgtct tgtttatcgg cgcaggcgaa atgattgagc tggttgccac ttattttgcc
     6241 gccaaaagtc cccggctgat gacggttgcc aaccggacgc tggcgcgtgc acaggagttg
     6301 tgcgacaagc tcggtgtcaa cgccgaaccg tgcctgctgt ccgatctgcc tgccattctg
     6361 cacgattacg acgtagtggt ttcttcaacg gcaagccagt tgcccattgt cggcaaaggc
     6421 atggtggagc gtgcattgaa acaaaggcag agtatgccgt tgttcatgct tgatttggca
     6481 gtgccgcgtg acattgaagc ggaagtcggc gatttgaatg atgcctatct ttatacggtg
     6541 gacgatatgg tcaacatcgt ccaaagcggc aaggaggcaa ggcagaaggc cgccgccgcc
     6601 gccgaaacgc tggtatccga gaaggttgcc gaatttgtcc ggcagcagca gggcaggcag
     6661 agcgtcccct tgattaaagc cttgcgggac gagggcgaga aagcgcgcaa gcaggtgttg
     6721 gaaaatgcga tgaaacagct tgccaaaggc gcaacggcag aagaggtttt ggaacggctg
     6781 tccgtccaac tgaccaacaa gctgctgcat tcgccgaccc aaactttgaa taaggcgggg
     6841 gaagaagata aagatttggt tcatgccgtc gcgcagattt atcatttgga caaataacgg
     6901 tgcgccggaa aaggatgccg tctgaagggg tttcagacgg catatttttg tgctgtctga
     6961 caacatcgtg aaatcccaca ttatatcgat gtaatcacaa agtatagtgg attaacaaaa
     7021 atcaggacaa ggcgacgaag ccgcagacag tacagatagt acggcaaggc gaggcaacgc
     7081 tgtactggtt taaatttaat ccactatatt atcccgtatg cggattggtt ttaagatttg
     7141 taaatttgat ttgcatcaaa aaatcgccga tagatgattc atataatatc aatattaaag
     7201 agtatcggta tatcggggat agtcatgtcc tgtttttcaa tcaaacgtat gtccgcgttt
     7261 cgggcgcgga taacggcgtt ttttgccgcc tttgtctttt tgacggcggc actgcccgct
     7321 tatgcggagc gtctgcctga ttttctggcg aaaatacagc cttcggaaat ttttccgggt
     7381 gcggaccgtt acggcaagcc ggaaggtaag cctatggttg cccgcgttta caaaggcgat
     7441 gagcagttgg gcttggtcta tatcacaacc gatgtggtca atacgcgcgg ttattcgagc
     7501 aaaccgattg atacgctgat ggcgttggct aaagacggta cgatagccgg agcgaaattg
     7561 gttgatcacc atgagtcgat tatgctgatc ggtatcccgc atttgcccgc gcccgggcgg
     7621 gcgatacgct caaactggct tccggcgtat atcaaaccaa acttcacatc gacaaaccga
     7681 ttacgattga agggcctgcc gaccgttctg caaccatcga aggagacagg agcgggcgta
     7741 ccatagccgt acacgcgccg gacgtaacgc tccgcaacct gaccgttacc cgttccggta
     7801 tgagcctgcc tgcaatggat gccggtattt atctcgaaga aaccgccccg cgcgccctga
     7861 tcgaacacaa caatattttg gataattcgg tcggcgtata tctgcatggt tctgccgatg
     7921 cgatggtgcg cgagaataaa atcgtcggcg atgcgacttt gcgcgtgaac gagcgcggca
     7981 atggcgttac cgtttggaac gcgcccggcg cgcaggtcgt cggcaacgat atttccaaag
     8041 ggcgggacgg cattttttcc aataccagca cgcacaacac ctataaaaac aaccgcttca
     8101 gcgatttgcg tttcgccgtc cactatatgt acaccaacga cagcgaaatc agcggcaata
     8161 tttccgtggg caacaatatg ggctatgtgc tgatgttttc cgagcggctc aaagtgtttg
     8221 acaatatcgc cgtcggcagc cgcgatcagg gcattatgct caactatgtc aactattccg
     8281 atattcacga caacattatc aacaaggcag gcaagtgcgt atttgcctat aatgccaact
     8341 acgataaact tttcgccaat cattttgaaa actgccaaat cggcatacac tttaccgccg
     8401 ccatcgaagg cacgtccctg cacgacaatt ccttcatcaa caacgaaagc caggtcaaat
     8461 acgtcagcac gcgctttctc gactggagcg agggcggaca cggcaactat tggagcgaca
     8521 acagcgcgtt cgatttgaac ggcgacggct tcggcgacag cgcgtaccgg cccaacggca
     8581 tcatcgacca aatcatctgg cgcgcgcccg tatcgcgtct cttgatgaac agtcccgcaa
     8641 tcagcatcgt caaatgggcg caggcgcagt ttcccgccgt tctgcctggc ggcgtggtgg
     8701 acagcaaacc gctgatgaag ccttatgccc ccaaaattca aacccgttat caggcgatga
     8761 aggacgagtt gctcaaagaa gccgaaacgc ggcagtcgga atggggcagg gcggagaacg
     8821 gttctttgaa ctagtctgct tcagacggca tccggatcca aatgccgtct gaaaacacaa
     8881 aaggaacaac catgaccaca catcatgtcg aattgaggaa ggtaaccaaa cggtttgggg
     8941 cgcaaaaagc cgtcaaccaa gtcgatttgg ttttgaaggc aggagaaagc gtcgggcttg
     9001 ccggacacaa cggcgcgggc aagtccacca ttatgaagct gatactcggg ctgattaccc
     9061 cgaccgaagg cgaagtgatg cttttgggcg aacgtaccgg tagcaaagcg ggggtgcggc
     9121 ttcgcagcca aatcggctac ctgcccgaaa ccgttgcgct gcacccttcg ctgaccggca
     9181 tcgaaacgct ggatttttat gccaaactta aaaaacagcc gctcacgcag aaccgggggt
     9241 gcttgagcgt gtcggtattt cacaggcggc acaccgccgc gtcggcacct actcgaaagg
     9301 gatgcgccaa cgccttgcct tggcacaagc cctgctgggc gaacccaaag tcctgctgtt
     9361 tgacgaaccg acaaccggtc ttgaccctgc atcaaggcaa atgttttacg aagtcgtgcg
     9421 cgaactcaac gggcgcggcg cgaccgtatt gctcagcacc cacgcccttg ccgagttgga
     9481 cggacacgcc gaccgcatta tcgtggatta aatttaaacc agtacggcgt tacctcgcct
     9541 tgccgtacta tttgtactgt ctgcggcttc gttgccttgt cctgatttaa atttaatcca
     9601 ctatatgtgg gtatggcggg tttgagcgga caaatcagcc tgaccgtccc cgttttgctg
     9661 accgctcagg ttttatgggt tatcattccg cttgttttgg cagccggaat ttttagaaag
     9721 cgacaaatat gaaaaaaacc ctgttggcaa ttgttgccgt ttccgcctta agtgcctgcc
     9781 ggcaggcgga agagggaccg ccgcctttac cccggcagat tagcgaccgt tcggtcggac
     9841 actattgcag tatgaacctg accgaacaca acggccccaa agcccagatt ttcttgaacg
     9901 gcaaacccga tcagcccgtt tggttctcca ccatcaagca gatgttcggc tataccaagc
     9961 tgcccgaaga gcctaaaggc atccgcgtga tttacgttac cgatatgggc aatgttaccg
    10021 attggacgaa tcccaatgcc gacacggagt ggatggatgc gaaaaaagcc ttttacgtca
    10081 tcgacagcgg ctttatcggc ggtatgggtg cggaagacgc gctgccgttc ggcaacaagg
    10141 aacaggctga aaaatttgca aaggataaag gcggtaaggt tgtcggtttc gacgatatgc
    10201 ctgataccta tattttcaaa taatattgaa aaaaccggcc gaaactttaa aaacgagttt
    10261 cggtcggttt ttcttttctt gttcggtata gtgtcggcag gaaagaacct tcacatcccg
    10321 ccgtaattcg gcccgctcgc gccttcgggg caaatccaag tgatgttttg cgtcgggtct
    10381 ttgatgtcgc aggttttgca gtgcacgcag tttgccgcgt tgatttgcag gcgcggattg
    10441 ccgttttctt caataatttc gtacacaccc gccggacaat agcgcgtttc gggcgaggcg
    10501 tattctttat agttcacgtc tatcatcgtt tgcggattgt tcagcaccaa atggtcgggc
    10561 tggttttctt cgtgcgcgag attggcaagg aagacgctgc tcaagcggtc gaaggtcaac
    10621 acgccgtcgg gtttcggata atcaatcggc ttgcacgcgg cggctttttt gagctgctca
    10681 ttgtctttgc cgtgatgttt cagcgtccac ggggctttgc ctctgaaaat catctggtcg
    10741 atgccggtat aaagcgagcc gaggtaaacg ccccattcga atgacggacg gacgttacgc
    10801 gcggcgtaaa gctcttgata cagccagctt tgttcaaaac gttgctgata atccgccgcc
    10861 tctttgccgc tgtcgaaacc ctccgcttct tcaaggtgtt ccaacaaggg gaacacggct
    10921 tcggcggcga gcatggcgga tttcatcgcg gtatgaatgc ctttgatgcg cggcatattg
    10981 aggaaacccg ccgcgtcgcc gattaaaacg ccgcctttga acgagagctt cggcaaactt
    11041 tgaaaaccgc cttcaatcag cgaacgcgca ccgtaagcaa tgcggcggcc gccttcaaag
    11101 gttttgcgga tttcgggatg ggttttgaaa cgttggaact cttcaaacgg cgacagataa
    11161 ggattttgat agtccaaacc gaccacgaag ccgacggcga ctttgttgtc gtcgaaatgg
    11221 taaacaaacg cgccgccgta ggttttgctg tccagcggcc agcctgcgct gtgcatcacc
    11281 aagccgggtt gatgtttttc agacggcact tcccaaatct ctttaatgcc caagccgtaa
    11341 gtttgcggct cgctgttttg gtcgagcttg aattgttcga tgacttgctt ggaaagcgaa
    11401 ccccggcagc cttcggcaaa cagggtttgc tgcgcccaaa gctccatacc gggctggaaa
    11461 ctgtcggtcg gcccgccgtc tttgcccacg cccatattgc cggtcgcaat gcctttgacc
    11521 gaaccgtctt cgtgatacag cacttcggcg gcggcaaagc ccggataaat ttccacgccc
    11581 aaattttccg cctgctccgc caaccagcgc acgacttcgc ccaagctgac gatgtagttg
    11641 ccgtgattgt cgaaatttgg ggtaataggc agattgaacg cttttttctc agtcaggaac
    11701 aacactttgt cctgcgttac cgtacgcgtc agcggcgcgc ctttttcttt ccagtcggga
    11761 atcaactcat tcagcgcaat cggatcgata accgcgcccg ccagcgaatg tgcacccgcc
    11821 tccgaacctt tctccaccac gcaaacgctg atttcgcgcc cgttctgttc ggcaagctgc
    11881 ttgagtttga tggcggcgga caaacccgat gggcctgcgc cgacaatcac gacatcgtat
    11941 tgcatactgt cgcgggtgat ggattctgtc atggcggttc ctgtgtattt attattgaat
    12001 tgcaaatccg taattataca acgggaacat atagttacca aatacaacaa aggtcgtctg
    12061 aaaaccatat tttcggtttt cagacgacct ttgtcgaaat ttcaataagc acgccaccat
    12121 tttacctgtc cgatcgcaaa ctccgtctga cgtttcggac tgcgtgtgaa aaacgcctta
    12181 tccccgccgg catccctccc tttcggcaca accgccaaaa tcttacctgc caaatttccc
    12241 tcacgggttt gccaagcatc caaaaactgc gccctgctca ttgaaacatg acccagcgac
    12301 gggtcggcaa gcaaaaccgt attgccgtct ataccgcgca ataccgagaa atgatcatcc
    12361 ttgcggtatt tcagatacac gatgacgggg atttgcaact gtgcaagctg ctcgaaagac
    12421 agggcatagc ctttcgcctc aaaacccaaa tcaggcatga tgcgccgcat atcctcaaac
    12481 gacgcgcgca tctgctcctt atccagcttt ttcaacacgt cctcttccgt cagcttttgc
    12541 ccgtgaaaat tgttcaaaag ccgtcgccac cgaagccgcc ccgcaggaaa aatccaaatc
    12601 ctgctttaca atattgaaat cgcgcctttc tttccaactc tgcactttga tttttccata
    12661 agcaacagga ttatagtgga ttaaatttaa accagtacgg cgttgcctcg ccttgccgta
    12721 ctatctgtac tgtctgcggt ttcgtcgcct tgtcctgatt tttgttaatc cactataggt
    12781 ttccgtgcgg acgtgttcag attcccgcct tcgctggaat aacggcggag cagtttctgc
    12841 ttttccgata aatgaccgta acttaaaatc ccgtcatccc cacgaaagca aaaatcctgc
    12901 ctgtcggatt tcggtttttt tgggcgtttc gggaaactta taaatcgtca ttcccgcgca
    12961 ggcgggaatc cggtttgctc ggtttcggtt tttcgggcgt ttcgggaaac tgatgaatcg
    13021 tcattcccgc gcaggcggga atctagaacg cgggacggcg gcaatattca aaggttgtct
    13081 gaaaattcag aggttctaga ttcccacttt cgtgggaatg acgggatata ggtttcccta
    13141 cggacgtgtt cagattccca ctttcgcggg aatgacggcg gagcgatttc tgcttttccg
    13201 ataaatgacc gcaacctaaa acccatcctt cccgcaaaaa cagaaaaaca aaaacctaaa
    13261 atcccgtcat ccccacgata acagttgcgt aattgcgtag agtgggcttc agcccaacgt
    13321 tttttctttt tcggtcgttg attggtgggc tgaagcccac ccttgtatat cggaactcc
//
LOCUS       DAWGBY010000045        12966 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.045, whole genome shotgun sequence.
ACCESSION   DAWGBY010000045 DAWGBY010000000
VERSION     DAWGBY010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12966
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.045"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            28..1821
                     /gene="lepA"
                     /locus_tag="WHG62_001115"
     CDS             28..1821
                     /gene="lepA"
                     /locus_tag="WHG62_001115"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ1725229.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVDAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGIIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPASEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKNGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRKSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            1964..2983
                     /gene="lepB"
                     /locus_tag="WHG62_001116"
     CDS             1964..2983
                     /gene="lepB"
                     /locus_tag="WHG62_001116"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ1725230.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQLEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHDTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(3202..3351)
                     /locus_tag="WHG62_001117"
     CDS             complement(3202..3351)
                     /locus_tag="WHG62_001117"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725231.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(3397..4302)
                     /locus_tag="WHG62_001118"
     CDS             complement(3397..4302)
                     /locus_tag="WHG62_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ1725232.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLSFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            complement(4868..5800)
                     /gene="cysK"
                     /locus_tag="WHG62_001119"
     CDS             complement(4868..5800)
                     /gene="cysK"
                     /locus_tag="WHG62_001119"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ1725233.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(5994..6599)
                     /locus_tag="WHG62_001120"
     CDS             complement(5994..6599)
                     /locus_tag="WHG62_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725234.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIALWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(6596..7447)
                     /gene="dapF"
                     /locus_tag="WHG62_001121"
     CDS             complement(6596..7447)
                     /gene="dapF"
                     /locus_tag="WHG62_001121"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ1725235.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            7583..7879
                     /locus_tag="WHG62_001122"
     CDS             7583..7879
                     /locus_tag="WHG62_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725236.1"
                     /translation="MSRLFLLLFPWAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANRILIQDFNSTGNALGGFYVPDCRKSSLSAKNI"
     gene            7893..8561
                     /locus_tag="WHG62_001123"
     CDS             7893..8561
                     /locus_tag="WHG62_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ1725237.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(8634..10757)
                     /gene="pnp"
                     /locus_tag="WHG62_001124"
     CDS             complement(8634..10757)
                     /gene="pnp"
                     /locus_tag="WHG62_001124"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ1725238.1"
                     /translation="MMFDKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVA
                     VTTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRP
                     LFPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYING
                     VYVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAIN
                     AINEFADEVNPELWDWKAPETNEELVAKVREIAGETIKEAFKIRQKQARSAKLDEAWS
                     AVKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTG
                     VLPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEV
                     GRVGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCL
                     SLLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQ
                     MDIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKI
                     REVIGKGGETIRAITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGK
                     VYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEV
                     DDRGRVRLSIKALLDAPAREENAAE"
     gene            complement(10991..11854)
                     /locus_tag="WHG62_001125"
     CDS             complement(10991..11854)
                     /locus_tag="WHG62_001125"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ1725239.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKVLEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRAKAVRLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYEVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            12053..12916
                     /gene="rfbD"
                     /locus_tag="WHG62_001126"
     CDS             12053..12916
                     /gene="rfbD"
                     /locus_tag="WHG62_001126"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ1725240.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFVHISTDY
                     VFDGKSKKPYQESDFTNPANVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLSAAIIRLLQQSNPVRGIYHYVGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         3205 a         3648 c         3064 g         3049 t
ORIGIN      
        1 ctaccgttca gcattaaaaa caatccaatg aaaaatatcc gaaatttctc catcattgcc
       61 cacatcgacc acggcaaatc gacgcttgcc gaccgcttca tccaatattg cggcggtttg
      121 gatttgcgcg aaatgagtac gcaggtactc gattccatgg acatcgaaaa agagcgcggc
      181 attaccatta aagcgcaaac cgccgcgctc aactacaaag cacgcgacgg gcaggtgtat
      241 caactcaacc tgattgacac gccgggacac gtcgacttct cttacgaagt ttcccgttcg
      301 ctgtcggctt gcgaaggcgc gcttttggtc gttgacgcgt cgcagggcgt ggaagcgcaa
      361 accgtggcga actgttacac cgcgattgat ttgggcgtgg aggttgtgcc tgttttgaac
      421 aaaatcgacc tgcccgccgc cgaccccgaa cgcgtggagc aggaaattga agacatcatc
      481 ggcatcgatg cggtcgacgc ggtgcagtgt tccgccaaaa gcggcatcgg cgtggaagac
      541 gttttggaag aaatcgttgc caaaattcct gcgccgaccg gcgatgaaaa cgcgccgttg
      601 caagcggtaa ttgtcgattc gtggtttgac aactatgtcg gcgtggttat gctgatccgt
      661 gtgaaaaacg gcatcatcaa gctgaaagac aaagtgcgct ttatgagtac caaagcggaa
      721 acgcaggttg agcagttggg cgtattcaca ccgaaatcgg ttcagaaaca agaactcaaa
      781 gccggcgaag tgggcttttt gattactggt gtaaaagaat tgggacaggc gaaagtcggc
      841 gatacggtta ctttggttgc caaccctgcc tccgagccgc tgcccggttt ccaagaagtg
      901 caaagccaag tatttgccgg actttatccc gtagaaagcc acgactacga agctttgcgt
      961 gatgctttgg aaaaattaca gcttaacgac gcttcgctaa aattcgagcc tgaagtttcc
     1021 caagcattgg gcttcggctt ccgttgcggc ttcttgggtc tgttgcactt ggaaatcgta
     1081 caggaacgtt tggaacgcga gttcgacatg gatttgatta ccaccgcgcc gacggtggtt
     1141 tatgaagtcg tgttgaaaaa cggtgagaaa atcgaagttg aaaacccgtc caaactgccc
     1201 gacatcggca gcatcgaaac catactcgag ccgattatta ccgcgaccat cctcgtgccg
     1261 caggaatacg tcggcaacgt catgactttg tgtaaccaaa agcgcggcgt tcaggtcaat
     1321 atgcaatata tgggccgcca agtcatgctg acttacgatt tgcccatgaa cgaagtcgtc
     1381 atggacttct tcgacaaact caaatccact tcgcgcggtt atgcttcgtt ggactaccat
     1441 ttcaaagagt tccaaccgtc tgatttgatt aagctggata ttatggtcaa cggcgaaaaa
     1501 gtcgatgcct taagcctgat tgtgcaccgt aaaagcgcgg ttcaccgagg ccgcgagctg
     1561 gcatcgaaaa tgcgcgaact gattccgcgc caaatgttcg acattgccgt ccaagccgcc
     1621 atcggcagcc agattatcgc ccgcgaaaac gtcaaagcac tgcgtaaaaa cgtcttagcg
     1681 aaatgttacg gcggcgatat tacgcgtaag aaaaaactgc ttgaaaaaca aaaggcaggt
     1741 aaacgccgta tgaaacaagt gggcaatgtg gaaattccgc aaagcgcgtt cttggcgatt
     1801 ttgcaggtga gcgacaaata actctggcac acagggcggc gcgtcgggaa cacccctcaa
     1861 accgccctaa tttcaggggc acgcgcccgc aaacaaattt tgcaatttgc cgccttaaaa
     1921 cggttgcacg gacaggcggg tttttaagca ttaaggaaca acaatgaaca caatgctaat
     1981 gtcgggcgcg gctgccgcgc tgcttgccgg catcatcctt tatttcaaaa gcgacaagaa
     2041 gcggcaggaa aacggtgaat ggagttccgg cctcgaatac gcctatatcc tgacagcggt
     2101 cggcgtgttt gccgctttgt ccctgtttat gagctttacc gccgttttcc tgattttcgt
     2161 tgtattgtgc ggtacggctt ggggggtata caaataccgc ctgaagactc atcccgaaat
     2221 ctcggaaagc agccacttcg gcgattattt cggcagtttc ttccctaccg ttttggtatt
     2281 gtttctcatc cggtcgttta ttgccgaacc gttccaaatt ccatccagct ccatgcgccc
     2341 gggcctgatc aagggcgatt tcattttggt cggcaaattt tcctacggct tgcgcgtacc
     2401 cgttttaaac aatatattta tccccacagg caaaatcgaa cggggcgatg tcgttgtttt
     2461 taattatcct ctgcagctgg agatgaccta catcaagcgt attgtcggca ttccgggcga
     2521 tgtggtcgaa tatcgggata agattttgac ggtaaatggc aaacccactt ccgatattcc
     2581 taacggcaca taccgttatc ccgacgacac cgacccttcc gaaatccacg acacggatat
     2641 gttccgcagc ggtttggacg gcaaatcctt caatattctg aaaaaagaag gacagcctgc
     2701 cgtttccctg cccgtattgg gcaaatatac ctccgatatt atgtctgaaa acggatattc
     2761 catagagcaa agcggtttgg aacactgcca atatgccgac gacggcagcg gtttcgtgtg
     2821 caaagttccc gaaggacgct atttcgctat gggcgacaac cgcgacaaca gtgccgattc
     2881 gcgctactgg ggatttgtgg atgacaagct ggttgtcggc aaggcaatgt tcattttgat
     2941 gaacttcggc gatttcggca gggccggtac ggcaatccgt taggccggaa aattacgccg
     3001 gaacatcaaa aatgccatcc gaaccctgtt tcagacggca tttttatcat caaacgcctt
     3061 gtttccctgc cggcagcctc ggggataata tagtggatta aatttaatcc actatatttc
     3121 cgtttgtgtg gaaacccatc ccattgaata aagggcattt cgtccgactg acggtgtggg
     3181 cggcatatgg aaatacggac attattttag ttgcattgcc attcctgcgg aggcggcttt
     3241 tttgattctg cccgccccga tgccgtctga aagggcttca gacggcattt tccgctccgc
     3301 gccgttgctg gcgtgtttgg tcttgccggt tttgactgcc tgccagttca atcgtacgca
     3361 ggtttgccac ggcagaaaat ctgatgccgg acggagtcaa ggctcggact gctgtttcag
     3421 cgaaccgagg taaattgccg aaagcgtcag cgccacccct gcccactgca cgccttcaat
     3481 cggtttgccc aacccgaaat aatcgatgaa cagggcggca accggttcgg acaaaagcag
     3541 cagccccgtc agcgacaacg aaagcagcgg aatcgcatag gcaaccatcg cccacgcgaa
     3601 gcactgcatc accacgccgt acacaagcac caaaccggca tctttccaag tcgtcggata
     3661 aagcgcgcca ccgtccatca gcaatgccgg aacaaccaac gataccgcgc cgcccaaact
     3721 caaaatcatc attgaaggga aaagcgccac cgtctcgatt tcatgggttt tgcggacgaa
     3781 caccatcgac agggcgagca tcagtcccga taccaaaccg ctgacgaatc cccaaaccgc
     3841 attaccgttg tagccgaatt ccgcaccggc aatcatcgcc acgccggcaa ctgccgatat
     3901 taagcctgcc tttttcagcc cgctcaaacg ctcgccgaaa aagaaaacac cgattgccga
     3961 caaaaaaaag atttgcaggc tgttgagcag ggtggaaata cccggcccga ccgcgtgtat
     4021 gctttcgtgc cacaacgcca aatcgaaaga gagaaacacg cccgccgtca gggcatatcg
     4081 gacggttttc ctgttttttg ggaatttttg cctgaaaaac cgtgctaaaa accaaaatac
     4141 gaacaccgaa atcagcaacc gccaaaatgc gattgcatac gaaccgacgg ggacggatct
     4201 gacaatcaga ctgcccagac cgaacaccac gcaacccagc accagcaatg gtgcggcata
     4261 ttttttgccg ttaccgacca caatatcccc tcccttcccc atacggctgc cgcgccgacg
     4321 gcaagaatgc cgccattccg aaaatatgcc gtctgaagcc caaagccccg gctgcacccg
     4381 gacaaacggc tgattttacg ggcaggccga ctattttccg ttggggcaaa aaaccgtcct
     4441 gccagataaa acccgaatat agtggattaa caaaaaccag tacagcgttg cctcgcctta
     4501 gctcaaagag aacgattctc taaggtgctg aagcaccaag tgaatcggtt ccgtactata
     4561 gtggattaac aaaaaccagt acagcgttgc ctcgccttgc cgtactatct gtactgtctg
     4621 cggcttcatt gccttgtcct gatttttgtt aatccactat atctgtactg tctgcggctt
     4681 cgtcgccttg tcctgatttt tgttaatcca ctataaaaaa tatttccctc aagcgatgtg
     4741 gcggcaccaa cacctgatta aaacacaacc ggcgttttcg gcatatacgc aaaaacgcat
     4801 ttcccagcac ggcgttacac cgataccgaa aaatgcgtct gaatgtttcg acaatccgat
     4861 taaagcatta tgccaaatct gcaaaaagtg gcgtagagag atagcgttcg ccataagaag
     4921 gcagcagcac gactatcagc ttgccttcgt tttcaggctg tttggcaagc tgcaacgcac
     4981 tccaaaccgc cgcaccggaa gaaataccca ccaaaatgcc ttctttttcc gctattgcgc
     5041 gggcggtttc aaaagccgct tcgttcgaca ctttggtaat gctgtcgtaa attttggtat
     5101 tcaaaacggt cggaataaag cctgcgccga tgccttgaat cgggtgcggg cctttttcgc
     5161 cgccgctcaa tacgggtgaa gcttcaggct cgacggcaac cactttaact tcgggtttgt
     5221 attttttcaa cacttcgccc acgccggtaa tcgtaccgcc cgtgccgacg ccggcaacga
     5281 agacatcgac tttgccgtcc gtatcccgcc aaatttcctc ggcggttgtt ttgcggtgga
     5341 cttcggggtt tgcctcattg tcgaactggc gcggcataaa ataagtgtcg ggatgcgcgt
     5401 ccaccaagga tttcgctttg gcaatcgcgc ccgccatacc ttcggcggca ggggtcagaa
     5461 tcagctccgc accaaacgcg cgcaacagca ttttgcgctc cttactcatg ctttccggca
     5521 tggtaatcgc cagcttgtag ccgcgtgcgg cacataccat tgccaaaccg acacccgtat
     5581 tgccgctggt tgcttcgaca atgacggtgt ttttgttgat tttgcccgct ttttcggcac
     5641 cctcgatcat tgcttcggca atgcggtctt tgacgctgct gcctggattg aaaaattcca
     5701 gtttcacggc aacctccgcc ttcaaacctt cggtcagacg gttcagtttg accaaaggcg
     5761 tgttgccgat tagttcggtg atgctgtttg caattttcat cttctgctcc tgaataataa
     5821 ggtttcgaca gtaaggcgca atccccatag gcatcctgtc cgattgcagg ggatttgcgc
     5881 cgaaacataa acaaatttcg gatatggctt tatcctaaac ctatgccgcc taaaaaacca
     5941 atatccaaaa tttctttctt tataactttt tgttccgata cggccgcacc gtattatctt
     6001 ccaatttctg aaagcagcag caccagtacc gagacctgca tcaacgctgc cgtcaacccg
     6061 ccgagtcgca gctgcgagcc gccgaacgtt gacggcggct gccggtctat accgcagcgg
     6121 tggacatagg caaccgccat cagcacaaac tgcaacacga accaataaac cggcttcagc
     6181 gcataaagtt tgagcagtgc cgcaaacaca aacacttgaa ccgttcccga aaagcaataa
     6241 tgcaccaacg cacatattcc gacaaaagca agcgtcatcg atacattact gacggcaaaa
     6301 agcccgagca gcggatgttc ggggtctgcc tgccatccgt ttccatctgt tttccggttc
     6361 caatgcccga tgaaaaaaaa tatgctgccc aaagtcaggt aaaaatgggg gatgaacaag
     6421 ggcgcggcgc gggtcattcc ccatatgccg ggcatcagct ttgcccccaa aaccgatatg
     6481 ccgagccaca gcgcaatact cgcccaaaac cattgcaaca ttcctgcgcg gaatatcaga
     6541 aacagaaaaa ccgccgcata cagtaaggca gacaaaaaat ccaaatgcag caaaatcatg
     6601 aatacgccaa ctcgccttca aacacggttt ccgcagggcc ggtcatcatc acatcgccgc
     6661 cgcaggccca ttcgatatat aaagttccgc ccggcaaaat cacctctacc gttttccctt
     6721 catccaacaa ccccagacgg atacccgcca ccacagccgc acacgcgccc gtaccgcacg
     6781 cttgggtttc gcccacgccg cgctcgaaca cgcgcaaacg aatcgcggtt cggccgacaa
     6841 cctgcataaa gccgacattg acgcgttcgg gaaactgcct gtgcggttcg ataagcgaac
     6901 cggtttcgcg caccggcgcg cattccacgt catcgaccac aatcaccgca tggggattgc
     6961 ccatattgac gcagctgaca ggctgaatgc cggattcgag atgcaccccg taaatacagg
     7021 catcatcccc ctcgcccgat tcggggacaa acggtatttc agacggcata aacttcggtt
     7081 tgcccatatt gaccgtaacc ataccgttat cggacaattt cggaaaaata acgccatttg
     7141 ccgtttcaac acaaatttct ttcttatcgg tcaaaccctt gtctgcaaca aaacgggcaa
     7201 aacaacgcgc tccgttgccg cattgcccga cctcgctgcc gtcggcattg aaaatacggt
     7261 aacggaaatc cacgccttcg gtttccgaac gcccgaccac caaaagctgg tcgaagccca
     7321 cgccccggaa acggtccgcc catgccgcaa tcggcgcgtc ctcgggggta aaatcctgac
     7381 tgaccgcgtc aatcaccata aaatcgttgc ccaaaccgtg cattttggta aatttcaaag
     7441 tgttcatatt gttccgaaat cccgtatcgt ctgttgcttc cgaatccgaa atcccccgca
     7501 ccgaagggaa atgcttccat ctcccgccgt cgggagatta aaataagcat tatactgttt
     7561 gttacccctt acaagaaaca caatgtcccg cctgttcctg ctgcttttcc cttgggcaat
     7621 ccttgccgcc tgcacccgaa acataccggc aaacccggcc gtttcaaatt gcgcgcatct
     7681 tcaaaaccgc accatcctgt attttgacgc acacggcaaa cccgccgacg gcgcagtaaa
     7741 gggcggattt tacaaaatta tcgaaataca gggtgcaaac cgcatcctta ttcaagactt
     7801 taacagcacg ggcaatgccc tcggcggatt ctatgtgccg gactgccgga aatcatccct
     7861 ttcagcgaaa aatatctgac ttcaaactgc ctatgaacca cgacatcact ttcctcaccc
     7921 tgttcctact cggtttcttc ggcggaacgc actgcatcgg tatgtgcggc ggattaagca
     7981 gcgcgtttgc gctccaactc cccccgcata tcaaccgctt ttggctgatc ctgctgctta
     8041 acacaggacg ggtaagcagc tatacggcaa tcggcctgat actcggatta atcggacagg
     8101 tcggcgtttc actcgaccaa acccgcgtgc tgcagaatat tttatacacg gccgccaacc
     8161 tcctgctgct ctttttaggc ttatacttga gcggtatttc ttccttggcg gcaaaaatcg
     8221 agaaaatcgg caaaccgata tggcggaacc tgaacccgat actcaaccgg ctgttaccca
     8281 taaaatccat acccgcctgc cttgcggtcg gaatattatg gggctggctg ccgtgcggac
     8341 tggtttacag cgcgtcgctt tacgcgctgg gaagcggtag tgcggcaacg ggcgggttat
     8401 atatgcttgc ctttgcactg ggtacgctgc ccaatctttt ggcaatcggc attttttccc
     8461 tgcaactgaa aaaaatcatg caaaaccgat atatccgcct gtgtacggga ttatccgtat
     8521 cattatgggc attatggaaa cttgccgtcc tgtggctgta agccccattc attcccgata
     8581 cccgtaaaaa ataccgtctg aaacctgttc agacggcact ttcaccctaa gcgttactcg
     8641 gcggcatttt cctcacgggc aggcgcgtcc agcagggctt tgatggacag acggacacgg
     8701 cctctgtcgt ccacttccaa tgctttcacg ttcaccacct gaccgacttg caggtagtcg
     8761 ccgacattgc gtacgcgctc gtgggcgatt tggctgatgt gtaccaaacc gtctttgccc
     8821 ggcatcacac tgacaatcgc gccgacattg ttgtcgagga ttttcaccac agtgccttcg
     8881 tacactttgc ccacttccac ttcggcagta atctgctcga tgcgtttttt cgccgcatcg
     8941 ccggcttctt gagtggttgc ggcaatggta atcgtaccgt cttcggcaat attgatttcc
     9001 gtaccggttt cagcggtaat cgcacggatg gtttcaccgc ccttaccgat aacttcgcgg
     9061 attttgtctt ggttgatttt catcgtgaac aagcgtggcg cgtgtgcgga cagctcttgc
     9121 gggcccgcaa cggcggcttt catctgatcc aagatgtgca gacgcgcttc tttggcctgc
     9181 gccaaagcga tttgcataat ctctttggta atgccttgga ttttgatgtc catttgcagc
     9241 gcggtaacgc cttcggtcgt accagccact ttaaagtcca tatcgcccaa gtggtcttcg
     9301 tcgcccaaaa tgtcggtcag gacggcaaat ttgttgcctt ccagaatcag acccatcgcg
     9361 ataccggcaa cgtgtgcttt caaaggcacg ccggcggaca gcaggctcaa gcagccgccg
     9421 cagacggaag ccatagagga agagccgttg gattcggtaa tttcggagac cacgcgcatg
     9481 gtgtagctga aatcttcagg tttcggcaat acggccaaca atgcacgttt agccaaacgg
     9541 ccgtgaccga tttcacgacg ttttggcgca cctacgcgac ccacttcgcc ggtagagtat
     9601 ggaggaaagt tgtagtgcag catgaagcgg tcggtgtatt caccggacag cgcatcaatg
     9661 atttgctcgt cgcgtgaagt acccaaagtt gcaaccgcca aagcttgagt ttcgccacgg
     9721 gtaaacaatg cagaaccgtg cgtgcgcggc aatacgccgg tttgaatgtt cagcggacga
     9781 acagtgcggg tgtcgcgacc atcaatacgc ggttggccgt ctaaaatttg gctgcggaca
     9841 acatcggctt ccaagtgttt gaaaatgcct ttgatttcgt tggctgccaa agtgtcggtt
     9901 tcctcggtaa tcaaggcttc ttttacagca ctccaagctt cgtccaattt ggcagaacgc
     9961 gcttgttttt gacggatttt gaatgcttct ttaatggttt caccggcaat ttcgcgtact
    10021 tttgcaacca attcttcatt ggtttcaggt gctttccaat cccaaagttc cggattgact
    10081 tcgtcggcaa attcattgat tgcattgatg gcaacctgca tttgatcgtg gccgtaaacc
    10141 accgcgccca gcatcacgtc ttcgggcagg attttggctt cggattccac catcaacacg
    10201 gcttttgaag taccggcgac caccaagtcc aattgcgatt tcgccaattc ggctttagtc
    10261 gggttcaaaa cgtacacgcc gtttatataa cccacgcgtg ccgcaccaat cggaccggca
    10321 aacggtacgc cgctcaacac cagcgcggca gacgcgccca acattgcagg aatgtcggaa
    10381 tcgatttcgg gatcgacgga cacgaccatc gctacgattt ggatgtcgtg gtagaaacct
    10441 tcggggaaca gcggacgaat cgggcggtcg atcagacggc tggtcaggat ttctttttcg
    10501 ctttgtttgc cttcgcgttt gaagaaaccg ccggggattt tacctgcggc gtaagtgcgt
    10561 tccaaataat cgacggtcag ggggaagaag tcttggcctt ctttcacttc tttgttggtg
    10621 gtaacggcaa ccaaaaccac ggtgtcgccc atagagactt taacggcagc ggcggcttgg
    10681 cgggcaattt cgccggtttc caaagtaacg gtctgattac cgtattggaa ggtcttaacg
    10741 tgtttgtcga acatcattgt tcctttcaaa ataccgcact gctaaaacac taataatgca
    10801 cactaaaatc cgaatgtgca tagttagggt ttcagaccgt gcggcaggtt gtaaacaagc
    10861 tttcagacga catttcggac gctgaaagca attccggatt ataaaggcaa ccatccttaa
    10921 aatccagtat tgatacaata aaaaggccgt ctgaaccata tttctttcag acggccttca
    10981 aacttaaaaa tcaatcctga gtcagcaaag tcaatgcttc ccgatacttc tcgacagttt
    11041 tctgaatcac atcggcaggc actttcggcg caggggcttt tttgttccaa ccgctttgtt
    11101 ccagccagtc gcggacgaat tgtttgtcaa aagacggcgg attggtgccg acttcatatt
    11161 gatccgccgg ccagaagcgg ctcgaatcgg gagtcaatac ctcatccatc agcgtcagcg
    11221 taccgtttgt atccaaaccg aattcaaatt tggtatcgca aataataata ccgcgcgatt
    11281 tggcatattc cgccgcttcg gtgtaaagcc gaaccgcctt ggcgcgcact tcttccgcca
    11341 attctttgcc gataatgcgt ccgcattctt caaagctgat gttttcatcg tgatcgccga
    11401 ctgcggcttt ggtcgatggc gtaaaaatca cttcaggcag ttgttgcgct tcctgcatac
    11461 cttcgggcag ccgaataccg caaaccgagc cggttttttg ataatctttc caaccgctgc
    11521 ctgccagata accgcgcaca atcgcctcta ctttcaccgg agtgagcttt ttagccacga
    11581 cggcgcgttt ttctaaaact ttggcttcgt tttcaggcaa aacatcgtaa accgtttgac
    11641 cggtaaagtg gttgggcata atatgcgcca gttttttaaa ccaaaaattg gaaatctgcg
    11701 tcagaatctc ccctttgctc ggaatcgggt cgtccaaaat cacatcaaac gcggacaggc
    11761 ggtcggaagc gaccatcagc atacgtttat cgtcgatttc atataaatcg cgcacttttc
    11821 cagaatagat ctttaccaaa ccaatctcac tcatttcgcc ccccctgaaa atatcttgaa
    11881 aataccgacc cgacacccga caggtttgaa tcacaaaccg atattctaac cgaagtcggc
    11941 gcaaaacaat acccatggca caaaaagcca acccgtcaac cgtcggcaaa gttttggcac
    12001 tataataccg acagcaagtc ctacaataca ctttcaccaa aggaaatacc tcatgagaat
    12061 cctattgaca ggctcgaaaa gccaactggc acgctgcctg cgcgaccgtc ttccggaaga
    12121 ctgggaaacc attgcgacgg attccgcatc cctagacatt accgatgccg atgccgtctg
    12181 caacatggtc aaaagtttcc aacccgacgc tattgtcaac acggctgcct atactgccgt
    12241 cgacaaagcg gaaggcaatg cggcagcggc atttgccgtc aatgcttccg ccgtttacaa
    12301 ccttgccttg gcagcacatc gcgcccatgc ccgattcgtc cacatttcga ctgactatgt
    12361 ctttgatggt aaaagtaaaa aaccttacca ggaaagcgac tttaccaacc ctgccaatgt
    12421 atacggacaa tccaaaaccg caggcgagct gctcgcactg tctgccaatc ccgacagcct
    12481 tatcctgcgg acttcttggc tgtttagcga atacggggac aactttgtcc gcaccatgct
    12541 gaaccttgcg cgggaacgtt ccccgctgtc cgccgtccac aaccaaatcg gctgcccgac
    12601 ctatgccggc gacttgtccg ccgccatcat ccgcctgttg cagcagtcca atcccgttcg
    12661 cggcatttac cactacgtcg gcggcaaatc cgtatcctgg tacgaatttg cccaacatat
    12721 tttccaagcg gcatcgcaac agcagacatc cttccccgtt cccgaattga ctgccgtttc
    12781 agacaaggaa tatccgaccg ccgcccccag gcccgcatac agcattttgg actgccgcaa
    12841 aatcgaaaac gacttcagca tcaaaccgtc agactggcaa aaagcccttg cacaggtcgt
    12901 ttccaagctg ctctgatgcc gcccgcctct ccgtttccgc cgtcaagcac cgccttggcg
    12961 gttttc
//
LOCUS       DAWGBY010000046        12865 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.046, whole genome shotgun sequence.
ACCESSION   DAWGBY010000046 DAWGBY010000000
VERSION     DAWGBY010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12865
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.046"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(53..361)
                     /locus_tag="WHG62_001127"
     CDS             complement(53..361)
                     /locus_tag="WHG62_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725241.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHNHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(345..647)
                     /locus_tag="WHG62_001128"
     CDS             complement(345..647)
                     /locus_tag="WHG62_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ1725242.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLARGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR"
     gene            complement(721..3084)
                     /locus_tag="WHG62_001129"
     CDS             complement(721..3084)
                     /locus_tag="WHG62_001129"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ1725243.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVIAEVKSVEKHPDADRLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSVKGIAREMSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAARGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGQFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLSQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3120..3638)
                     /locus_tag="WHG62_001130"
     CDS             complement(3120..3638)
                     /locus_tag="WHG62_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725244.1"
                     /translation="MSEIINLTESGITFNLVKNNLFYIEPYIRKRRQEGIKTVEFIYL
                     QEDNLLFVEAKQSIPNQERSPERFDEYISEIYQKWCNALNVEILGILGREDIKETIMP
                     SAFSNLQWGSIEIKLLLVIPDVPLNYLGQLNELIKQEFNKKDTLRLISLWNISVEVIN
                     RDLAIQKGLASS"
     gene            complement(3645..4709)
                     /locus_tag="WHG62_001131"
     CDS             complement(3645..4709)
                     /locus_tag="WHG62_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ1725245.1"
                     /translation="MIKSFWLENFGPISLLKADNLGKINLIIAENSKGKTFILKALYS
                     VLKSHEEAHKGKNIRDFSEELRDKLYWTFQVEEIGDLVTRGKENPNERPLKLSMTLED
                     SSSVLFSFGRTTKKLIKPELYELSPRINANSIFLPPKEVLSLFDVIKKSEEEKRFGFD
                     ATYIDLVKALDIKPTKGRNYPEAAEARKDLEALFGGYVSYNDKKKAWVYEKDRQTFSI
                     NSTAEGVKKIGILDTLLGNRFLSPGSILFIDEPEANLHPKAINQFLEILFYLSKSKLG
                     IQIFMSTHSYFVIKKLCLLARKHSESIPVFMPGKEKEQTTWVQENLQNSMPDNEIIGE
                     SIRLFREEIGVLSPETAWIG"
     gene            complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WHG62_001132"
     CDS             complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WHG62_001132"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ1725246.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSGEIDIMGENGKWLEVGGCGM
                     VHPNVLRNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
     gene            complement(6224..6583)
                     /gene="rplT"
                     /locus_tag="WHG62_001133"
     CDS             complement(6224..6583)
                     /gene="rplT"
                     /locus_tag="WHG62_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ1725247.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(6596..6793)
                     /gene="rpmI"
                     /locus_tag="WHG62_001134"
     CDS             complement(6596..6793)
                     /gene="rpmI"
                     /locus_tag="WHG62_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ1725248.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(6940..7461)
                     /gene="infC"
                     /locus_tag="WHG62_001135"
     CDS             complement(6940..7461)
                     /gene="infC"
                     /locus_tag="WHG62_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ1725249.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(7479..9392)
                     /gene="thrS"
                     /locus_tag="WHG62_001136"
     CDS             complement(7479..9392)
                     /gene="thrS"
                     /locus_tag="WHG62_001136"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ1725250.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(9446..9522)
                     /locus_tag="WHG62_001137"
     tRNA            complement(9446..9522)
                     /locus_tag="WHG62_001137"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9486..9488),aa:Val,seq:gac)
     gene            9701..10816
                     /gene="tgt"
                     /locus_tag="WHG62_001138"
     CDS             9701..10816
                     /gene="tgt"
                     /locus_tag="WHG62_001138"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ1725251.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQAKKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEQFDFPGLAVGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            10826..11908
                     /locus_tag="WHG62_001139"
     CDS             10826..11908
                     /locus_tag="WHG62_001139"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ1725252.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            12100..12501
                     /locus_tag="WHG62_001140"
     CDS             12100..12501
                     /locus_tag="WHG62_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ1725253.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVTTYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(12564..12854)
                     /locus_tag="WHG62_001141"
     CDS             complement(12564..12854)
                     /locus_tag="WHG62_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725254.1"
                     /translation="MAKYFTETGIGVREHFDFFGEFVVSPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQESVECGRIDIGGFMLTAKEVDGDGNIGSMGLKVPR"
BASE COUNT         3263 a         3405 c         2859 g         3338 t
ORIGIN      
        1 attttttagc gtgtaaaaca aaaccggctg catacctgca accggcctca aatcagcaca
       61 attccttatc caaatcagcc aacagctctt tcagaccgtc tccgatttcc tgaagcgtaa
      121 ccggacggtt gccgtccgaa cccgattccg caccttctgc atacggtgca aacgtgctct
      181 gcaatttcaa cagtttcacc acatccaaac gggtgtagcg ttcgccgccg taaccgacaa
      241 ccacaccgtg attatgctgc cattgcgcaa aaccataggg gctgatttgc aacagtccgc
      301 acaactcgtc cagcgtgaaa tagcgttttg cgggaacctt caaatcaacg ttgtttgtca
      361 tagtaatgtt ccaccatgcc tttgagtttc tggctggcat ggaaagttac cacgcggcgg
      421 gcggtaatcg gcacttcctc gccggttttc ggattacgac cggggcgttg tggcttatcg
      481 cgcaactgga aatttccgaa accggaaatt ttgatttctt cgccgcgcgc caaagtgctg
      541 cggatttctt caaaaaagag ttcgacaatt tctttggcat cgtttttggt gacgttgctg
      601 actttgtcta ccaaaatatc ggccaattcg gctttagtga gagtcatatg attaccttct
      661 gttgtaacaa ttgtggatta ttaccaattt ttatttaaaa ttcaagcgaa tatttatttt
      721 ttaactgcga agccgcgccc ctgccgccgt tgccgcgcca atcagttttc cgataagcgg
      781 ctcgaccgcc tcatccgtca gcgtgttttc catatcctgc aaaatcactt tgaccgccac
      841 gctcttcatc ccttcgggca aacccgtgcc gcgatacacg tcaaacacgc tgatttcctg
      901 taccaacttg tttgccgcgc ctttcaagac aagcagcaaa tcatcatggc tcatagcttc
      961 cggcatcaca aacgccaaat cgcggcgcac cggctggaat ttcgatacgg cccgatagcg
     1021 cgttttcccg cattccaaca cggccgccat atcgatttca aataccagcg gcgcttgcga
     1081 caggtcgtat ttttgcagcc atttcggatg cagttcgccg acaaagccga tgactttgcc
     1141 gtctgaaacg atattggcgg cacgtccggg atgcagggcg ggatgtccgg ttttaacgaa
     1201 ctcgactgct ttgtttttca acagattttc cacgtccgcc ttgatgtcgt aaaaatctgc
     1261 attgcgcgtt ttcccgcccc attgttcggg cattgccgcg ccgtaccaca agccgccgat
     1321 gcgttcgttt tggacaaact ggccgtctga acctttgccg aacacgcggg cgatttcaaa
     1381 cacgcgcacg cggttttgtt tgcggttcag gttgttttgc aaaatttcca ccaagccgcc
     1441 gatgagtgtg gaacgcatca cggcatattg cgccgccaac gggttttgca ggcggatggg
     1501 gtcggcgttg gcggcaaaat cttgttccca ctgctcgtca acgaaggcat agctgaccac
     1561 ttcgcggtag ccgcgcgccg ccatttcgtt gtaaacggca aaacgcgggc ggcgtgtttc
     1621 gggcagttcc agcattttca gacggcctga cgtgtaatcg tcggggatgt tttcatagcc
     1681 gtaaacgcgt ccgatttctt caatcaaatc agcctcaatt tcgatgtcaa aacggaagct
     1741 cggcgcggta acgcggaagc cttccgccgt tttctcgggc tgcaggccca agtgttgcaa
     1801 aatggtttcc acctgttcgg caggaatgtc cacgcccaac acggttttca gacggcccaa
     1861 acgcaatccg acctgcttcg cttcgggcaa ttcgccttgc gcttccacca tttcgcctgc
     1921 cgcaccgccg caaatctgca acaccaattc ggtagcacgt tcaatggcat ccgcctgcaa
     1981 acggtaatcc acgccgcgct cgaagcggaa cgacgaatcc gaaccgaaac cgtattggcg
     2041 cgatttgccg gcgatgattt cgggcgcaaa ccaagccgct tccagcacga tattttgcgt
     2101 gccgtctgaa accgcgctcg ccgcgccgcc cattaagccc gccaaactca acacgccttt
     2161 ttcgtccgcc acgaccagcg tgttttcaga cagggaaacg gttttctcgt tcaggcattc
     2221 cagcgtttcc ccttcgcgcg cgcggcggat gtgcaggctg ccggaaagtt tgtcggcatc
     2281 aaaaacgtgc atcggctgac cgatttccag catcacataa ttgccgatgt ccaccagcgc
     2341 ggaaatactg cggatgccgc tgcgctccaa acgttgtttc atccaatcgg gagtagccgc
     2401 tttcgcattg acattttcaa taacgcggct gataaaacgg ccgcaatcgg caggcgcgtt
     2461 aatctgcacg ggctgttttc gactgcccgt gatcggcgcg gtatggattt cgggctgcct
     2521 gaacgcgcac cccgtcaatg cggacatttc gcgcgcaatg cccttaacac tcaagcaatc
     2581 agcgcggtta ggcgtaattt tcaacgtaaa cagcgtatcg tccaaatcca agtattcgcg
     2641 gatattggta ccgacgggcg catcttcagg cagaatgtgc aggccgttca caccgtcgtc
     2701 gggcagaccg agttcgtcgg tggaacacaa catcccgtcc gacaccacgc cgcgcatttt
     2761 ggtcggcttg attttgaaat tacccggcaa aacggcaccc ggcagcgaac acggcacttt
     2821 gatgcccgct ttcacattcg gcgcaccgca cacaatctgc accaacccgc ccgtacccgc
     2881 atcaactcgg gtaacgttca aacggtctgc atccggatgt ttttcaacgg atttcacttc
     2941 ggcaatcacc acgcccgcaa acgcaggcgc ggcagtttcg gcctcttcca cttccaagcc
     3001 ggacatcgtt aacagatgtt ccagcttatc ggaggaaagt tcggtatcgg cttgggtttt
     3061 cagccatgag taggagaatt gcatgttatg ttctcaatta actaattaac tttagatttt
     3121 caagagctag ctaaaccttt ttgaatggct aagtccctat taattacttc tacagaaatg
     3181 ttccataaag aaatcaaccg caaagtatct ttcttattaa attcttgctt tattaattca
     3241 ttcaattgcc caagataatt aagcggcaca tccgggataa ccagtaataa tttgatttct
     3301 atgctacccc attgcaaatt tgaaaaagca ctaggcataa ttgtttcttt gatatcttct
     3361 ctgcctaata ttcccaaaat ttcaacattt aatgcattac accatttttg ataaatctct
     3421 gaaatatatt catcaaaacg ctcaggagat ctttcttgat ttggaatact ttgttttgcc
     3481 tcaacaaata acaaattatc ttcttgcaga tagataaact ctactgtctt aataccttct
     3541 tgccttctct tccggatata tggttctata taaaacaggt tattttttac tagattaaaa
     3601 gttatacctg attcagtgag atttattatt tcactcataa aaacctaacc aatccatgct
     3661 gtttccggag ataaaacacc tatttcttct ctgaacaatc gaatagactc accaataatt
     3721 tcattatccg gcatgctatt ttgtaaattt tcctgcaccc aagtagtctg ttccttttct
     3781 ttgccaggca taaaaacagg aatactttca ctatgctttc tagctaataa acacagcttc
     3841 ttgataacaa aatatgaatg cgtactcata aaaatctgta ttcccaattt ggatttagat
     3901 aagtaaaaca gaatttctag aaattgatta attgctttcg gatgtagatt agcttctggc
     3961 tcatcaataa ataagattga tccaggactc aaaaaccgat ttcctaatag agtgtctaat
     4021 atcccaatct tttttacccc ctctgctgta gaattgatag agaaagtttg tctatctttt
     4081 tcatataccc atgccttctt tttatcattg tagctaacat aaccgccaaa caatgcttct
     4141 agatcctttc tagcttccgc tgcctcaggg taattcctcc cttttgttgg tttaatatcc
     4201 aatgctttta ccaaatcaat gtaagtagca tcaaaaccaa atctcttttc ttcctctgat
     4261 tttttaatta catcaaatag tgatagaact tctttgggtg gtaaaaaaat agagttagcg
     4321 tttattctgg gagaaagttc gtacagctcc ggtttaatta gctttttggt agttctacca
     4381 aaagaaaaca aaactgaaga actatcttct aaagtcatac ttaacttaag aggccgttcg
     4441 tttggatttt cttttcctct tgtaactaaa tcaccaattt cctctacttg gaacgtccaa
     4501 tatagcttat ctcgcaattc ctcagaaaaa tcacgaatat tctttccttt atgagcttcc
     4561 tcatgacttt ttaaaacact atataatgcc tttaaaataa aagttttccc tttgctattt
     4621 tctgcaataa ttaaatttat tttccctaaa ttatcagcct tcaataagct aatcggcccg
     4681 aaattttcaa gccaaaatga tttaatcata taatccccct aatatatatc aacaatattt
     4741 gtacaagaca cattgtgaaa agacagcaac cacagcacca tagtaaacgc atagcaggcg
     4801 gataatggag cgacatagcg tttcatgatt tagctttctg aggtaggcac aggctgcttt
     4861 tttcattttt aggcagccta cacaatcatt ttacaaactg cttcaaaaaa ttcaaatcgt
     4921 tatcaaaaaa caagcgcaaa tcgttcacgt tgtaacgcag catcgcgaaa cggtcgagac
     4981 cgataccgaa agcgaaaccg gtgtattttt cgggatcgat attcacattt ctcaacacgt
     5041 tgggatgcac cataccgcag ccgccgactt ccagccattt gccgttttcg cccataatgt
     5101 cgatttcgcc agacggttcc gtgaacggga agaaagacgg gcggaaacgt acttgcaaat
     5161 catcgcgttc aaagaagcga cggataaaat ccgtgaacac tgcttttaag tcggcaaaag
     5221 ttacgccctc ttctacccac aaaccttccg cctgatggaa cataggcgag tgcgtggcat
     5281 cgctgtccac acggtaaacg cggccggggg cgataatgcg gatgggcggc tcttttttat
     5341 cgagcatata gcggatttga atcggggaag tgtgcgtacg caaaacatca ccgttttcaa
     5401 cgtaaaacgt atcctgcatc gcacgggcag gatggtttgc agggatgttc agggcttgga
     5461 aattgtgaaa atcgtcttcg atttcaggcc cgtccgccac ttcgaaaccc attccgtgaa
     5521 agagttcgac cacacgttgc aaggtcaggg ttacgggatg caggctgccg ccttcctgag
     5581 cgcgtccggg cagggtaatg tcgagggctt cggcggcaag tcgggcttgc agcttggctt
     5641 cgttgagggc atcgcgtttg gcattaaaag ccgtctgaaa ccggtttttg cattcattga
     5701 tatgcgcacc tatggttttg cgctcttcag gcgacatttg ccccaaagtt ttcagaagtc
     5761 cggtcaactc gccggttttg ccaagataac gggctttgat ttgttctaga gcgttgaagt
     5821 cttgcgcagc ttctactgcg gcaatgcctt ctgcaacgat gcggtttaca ttttccataa
     5881 tatcaagtct gtcaattaat gatatgccac ctgaaacaac gaggccgcct gtatagcctg
     5941 acatatcaga ctcttcagac gaccttattt tcttcacggt caatccattg gataaatttt
     6001 ctgtatagtg gattaaattt aaaccagtac ggcgttgcct cgccttgccg tactatctgt
     6061 actgtctgcg gcttcgtcgc cttgtcctga tttaaattta atccactata ttttaacgca
     6121 aatttattta aaaaaataga ctttaaagaa agaaaatcaa tcacatagaa tttctgcaaa
     6181 caaagaaaaa aggaagccgc agcttccttt tcaatttttt ggattaagca gccaaagcag
     6241 ctttggcttt ttcaaccaat tgtgcaaaag cggctttatc gaacacggcc aaatcagcca
     6301 atactttgcg gtcgatttcg atagaggcgc gtttcagacc attcataaat ttgctgtaag
     6361 acaacccgtt ttcacgcgca cctgcattga tacggacaat ccacaattga cggaattggc
     6421 gtttgcgttg gcggcggtcg cggtatgcgt attggccggc tttcattacc gcctgcttgg
     6481 caacgcggta aacgttttta cgacggccgc gatagccttt ggctaacgcg aagatttttt
     6541 ggtgacgggc acgagcggta acaccgcgtt ttacgcgtgg catattctaa actccttaag
     6601 cgtagggtaa cattttagca acagaagcca aatcgcgatc atttaccata gaggtaccgc
     6661 gcagttggcg tttgtttttg gtggtctttt tagtcaagat gtggcgtttg aacgcatgag
     6721 cgcgtttcac accgccgtta cccagtactt taaagcgttt tttcgcgcta gacttggttt
     6781 tcattttagg catgggaaaa ctccattcgt tatcggataa ggcattaggg ggttttaaaa
     6841 catcggtttc aaacacttga acccacaata ccacggtttt ttgccgcaat tgaaaactta
     6901 ctccgaagcg gcaatcggag caagaggaga attatagctt tattttttct tcggcgcaat
     6961 catcattacc atttggcgac cttccatttt gggaaaggac tcgatttgcg ccacttcagc
     7021 caaatcttct tttacacgtt ccaaaagttg cgcgccaagt tgctggtgag ccatttcacg
     7081 accgcggaaa cgcaatgtca ctttgacttt atcgccgtcg gcaaggaagc ggttgatgtt
     7141 gcgcatcttg atttgataat cgccctcatc tgtacccgga cggaatttaa tttccttaat
     7201 ttgtacctgc ttttgatttt tcttggcttc gtcgcgcttc ttggcttgtt ggtatttgta
     7261 tttaccgtaa tccatcagtt tgcacacagg cggtttggcg gtaggggaaa tttccaccaa
     7321 atcgacatcc tgcccttcgg ccatagccaa agcttcacga actgaaacga caccaagctg
     7381 ttcgcctgac tcactgatta aacgcacttc tttggcggta atttcgccgt tgattcgtgc
     7441 ttcgcgttct tgagcgatga tgaatactcc tataaaaatt aatgattgac gagggcatca
     7501 gtgatttctt gctgcaattg cgcaatgaaa tcatccaaat ccaaagaacc caaatcttct
     7561 gctttgcggc gtaccgccac tttgttttcc tgcttctcct tatcgccgac aacgatttga
     7621 taagggaaac ggtattggct gttgtcgcgg attttgtaac cgattttttc gttacgcaaa
     7681 tccaactcgg cgcggaatcc tgccgcctgc aatttggcag ccacttcacg gcagtaatcc
     7741 gcttgatttt cggtgatatt cataatcacc atttgaaccg gcgccagcca taacgggaaa
     7801 gagcctgcat ggttctcaat cagaatgccg ataaaccgct ccaaagaacc taaaatggcg
     7861 cgatgcaaca taacaggccg cgcgcggtcg ttgttttcgg ttacatattc tgcatccaag
     7921 cgttccggca agacgaaatc cagttgtaat gtaccgcatt gccaagaacg acccaaggca
     7981 tctttgacgt gatattcgat tttaggcccg taaaatgcac cctcgcccgg caattcgccc
     8041 cattccacgc cgcaggcagt caatgcctcg cgcaaaccct gctctgcctt atcccacacg
     8101 tcatccgaac ctgcgcgttt ttcagggcga agagaaagct tgacggatac atcatggaaa
     8161 ccaaactgtt tgtagatgcg aaccaacaat tcattgaacg cacgggcctc gctgacgatt
     8221 tgatcttcgg tacagaaaat atgcgcatca tcctgcacga acccacgaac ccgcatcaga
     8281 ccatgcaatg caccgctcgg ctcgttgcgg tggcaggaac cgaattccgc caaacgcatc
     8341 ggcaaatctc gatacgaacg caaaccgttg ttaaaaattt gaacatgacc cggacagttc
     8401 atcggtttaa ccgcatattc gcgtttttcc gaactggtta cgaacatatt gtctttgtag
     8461 ttttcccagt gtccggattt ttcccaaaag gttttatcca tgatttgagg cgttttgacc
     8521 tctttataac cggcggcgtt cagctcttta cgcatatgct gttcaatcac ttgccacaaa
     8581 gcccagcctt taggatgcca aaacaccatg cccggtgctt cgtcttgcaa atggaacaga
     8641 tccaattgct tgccaagttt gcggtggtcg cgcttttcgg cttcttcgat acgttgaata
     8701 taggctttca actcgtcttt tgtcgcccaa gccgtaccgt atatgcgttg cagcatttca
     8761 ttgttgctgt cgccgcgcca gtatgcgccc gccaacttgg tcagtttgaa gtttttcagg
     8821 aaacgggtat tcggaacgtg cggtccgcgg cacatatcga catattcctg atgatgatac
     8881 atccccatcg cttccacttc gggcatatcg tcaatcaggc gcagtttgta ttcttcgccg
     8941 cgctcttgaa aaattttaat cgcctccgca cgcggagtca tgattttgac cacatcatag
     9001 tcttgggcaa tcaattcttt catacgcgct tcaatggcgg caacatcttc cggtgtaaac
     9061 ggtttttccg tggcgatgtc gtaataaaag ccctcttcaa tgacggggcc gataaccatt
     9121 tttgcattag gatagagttg cttgacggca tgcccgacaa gatgggcgca ggaatggcgg
     9181 atgatttcga tgccttcctg atctttcgga gtaatgattt gaacagcaga attttcaaca
     9241 atcgggtcgc acgcatcgac caatttgccg tttaccctgc ctgccaccgc cgccctcgcc
     9301 aaaccgacac cgatagacgc agcaatttga gccacggtaa cgggggattc gtattggcgg
     9361 actgagccgt ccggcaaggt aatgttcaac atcaaaaagc tccaaaacat taaaaaataa
     9421 cggcataaat gccgttatgg gaatttggta ggcacgattg gattcgaacc aacgaccccc
     9481 accatgtcaa ggtggtgctc taaccaactg agctacgtgc cttcaaagaa tttttgcatt
     9541 ttatcgggtc gttttaattt ttgcaagagg tatgtgcatt tctttatgca acattgtggc
     9601 aagatttggg gatgtcgtct gaaaaaccgt gggaattcat ttataatgcc gtcttttaaa
     9661 acatatttcg ccccctgtcg cccaactgac attcaatctt atgcttaaat ttactttaca
     9721 caaaaaagac ggatacgccc gacgcggcac gctggagttg aaccacggca aaattgaaac
     9781 gccggtattt atgcctgtcg gtacttacgg ctcggttaag gcgatgaacc cgcaaaacct
     9841 gcacgacatc aaggcgcaaa ttattttggg caacacttat catttgtggc tgcgtccggg
     9901 cttggaggtc gtcgaacagt ttggagggct tcacggcttt atcggctggg acaaaccgat
     9961 tttgaccgac tcgggcggtt ttcaggtttt ttctttgtcg gatatgcgca agctgacgga
    10021 agaaggctgt acgtttaaaa gcccgatcaa cggcgacaag ctgtttttat cgcctgaaat
    10081 ttccatgaaa atccaaacgg ttttgaactc ggacatcgcg atgcagctgg acgaatgcac
    10141 gccgggcgaa gcaacgcgcg aacaggcgaa aaaatcgctg caaatgagcc tgcgctgggc
    10201 ggaacggagc aaaaaagcct ttgaagattt gaaaaacccg aacgcgctgt tcggcatcgt
    10261 gcaaggcgcg atgtatgagg atttgcgcga agaatcgctg cgcggtttgg aacagtttga
    10321 ttttcccggc cttgccgtcg gcggcttgtc cgtcggcgaa cccaagcccg aaatgtaccg
    10381 tatgctgcgc gccgtcggtc cgattctgcc ggaacacaag ccgcattacc tgatgggcgt
    10441 aggcacgccg gaagacctcg tgtacggcgt ggcacacggc atcgatatgt tcgactgcgt
    10501 gatgcccacc cgcaatgcgc gcaacggctg gctgttcacc cgtttcggcg atttgaaaat
    10561 caaaaacgcc aaacacaagc tcgacaagcg tccgatagac gaaagctgca cctgctacgc
    10621 ctgccaaaac ttcagccgcg cctacctgca ccatctgcac cgcgccggcg aaatcttggg
    10681 cgcacagctc aacaccatcc acaacctgca tttctaccaa gtcattatgg cggaaatgcg
    10741 cgatgccata gaacaaggca aatttgccga ctggcaggcg cgattccacg aaaaccgtgc
    10801 tcgcggcaca gactgactcc cggcaatgcc gtctgaagcc gcttcagacg gcattttgcc
    10861 gctttaccct acccgcacta tttttcagaa accgatcatg cttccattcc ttccagaacc
    10921 ctccctttcc tatacgcaac aaaaccgtac cgccgttttg ctgttgaacc tcggcacgcc
    10981 cgacgcgccg accgcgcagg cggtacgacc ttatctgaag tcctttctga ccgaccggcg
    11041 cgtcgtcgaa ctgcccaaat ggctgtggta tcccattctg catggtctgg tactgacgtt
    11101 gcgccccaaa aaaagcgcgc acgcctatga aaaaatctgg tttaaggaag gttcgcccct
    11161 agaagtttac acagcacgcc aagctgccgc gcttgccgaa cgtatgcccg acctcatcgt
    11221 ccgccacgcc atgacctacg gcaatccttc ggtggcagac gtattgtcgg aactgaaggc
    11281 gcaaggcgcg ggcaggctgc tggttatccc gatgtacccg caatatgccg cttccagcag
    11341 cggcgcggca gtagataagg tgtgcgaaca attactgctg caacggaacc aaatgagcgt
    11401 ccgcaccgtt tcgcgctttt atgacgatac cggctacatt gatgcgatga aaaaccacat
    11461 cctccgatat tgggcggaac acggacgtgg gaaaaaactg atgttgagtt ttcacggcgt
    11521 accgcagaag cactacgacc tcggcgaccc ctatcccgac gagtgccgcc acaccgccaa
    11581 actgcttgcc gaagcactgg aactgaccga agaccaatat gtcgtatcgt tccaaagcca
    11641 attcggcagg gcaaaatggg ttacaccgag cacgcaggat ttgttcggca aactgcccaa
    11701 acagggggta accgagctgg acgtattctg cccgggcttt ttggcagact gtttggaaac
    11761 catggaagaa atcgccctga tggggcggga acagttttat gaagcaggcg gcaaaagcta
    11821 ccgctatatc ccctgcctca acgacaatcc cgactggata gacgcactcg tcgcacttgc
    11881 cgaagaaaac cttggcggct ggcgttgaaa ctgtttgacc catgtctaaa atgccgtctg
    11941 aacgccgtgt tcagacggca ttttcccgct actttagcgt atgatggcat ctatgccgga
    12001 caacaacatc aagtgcaacc ttactaccga ttcggcaaaa aaatctttca cccgctacgc
    12061 aaaatcaaca acaaggtttc aaacattaag gaaacaccaa tgaacacaac ccgactgccg
    12121 accgccctcg tcttgggctg cctctgcgcc gccgcttctg ccgccgacaa cagcatcatg
    12181 acaaaagggc aaaaagtgta cgaatccaac tgcgtcgcct gccacggcaa aaagggcgaa
    12241 ggccgcggaa ccatgtttcc gccgctctac cgctccgact tcatcatgaa aaaaccgcag
    12301 gtgctgctgc acagcatggt caaaggcatc aacggtacaa tcaaagtcaa cggcaaaacc
    12361 tacaacggat tcatgcccgc aaccgccatc agcgatgcgg acattgccgc cgtcaccact
    12421 tatatcatga acgcctttga caacggcggc ggaagcgtta ccgaaaaaga cgtaaaacag
    12481 gcaaaaggca aaaaaaacta aacagacaaa atgccgtctg aaaccggcaa tccggcttca
    12541 gacggcattc aaatcaaacc tttctaacgc ggtactttca gccccataga cccgatattg
    12601 ccgtccccgt caacctcctt cgcggtcagc ataaagccgc cgatgtcaat acggccgcac
    12661 tcgaccgact cctgactgtc ggaacgctta tcgaaaagct cggcaaggct caaaccctct
    12721 tcgcccgctt ccagcctcaa accgtaagca agtgccaaat cacccgaacg tgctgccggc
    12781 gaaacgacaa actcgccgaa aaaatcaaaa tgctcacgga caccgatacc cgtctcggta
    12841 aagtatttcg ccattttata gtgaa
//
LOCUS       DAWGBY010000047        12843 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.047, whole genome shotgun sequence.
ACCESSION   DAWGBY010000047 DAWGBY010000000
VERSION     DAWGBY010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.047"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(144..234)
                     /locus_tag="WHG62_001142"
     tRNA            complement(144..234)
                     /locus_tag="WHG62_001142"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(273..359)
                     /locus_tag="WHG62_001143"
     tRNA            complement(273..359)
                     /locus_tag="WHG62_001143"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(323..325),aa:Leu,seq:cag)
     gene            complement(396..482)
                     /locus_tag="WHG62_001144"
     tRNA            complement(396..482)
                     /locus_tag="WHG62_001144"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(446..448),aa:Leu,seq:cag)
     gene            571..2946
                     /gene="rnr"
                     /locus_tag="WHG62_001145"
     CDS             571..2946
                     /gene="rnr"
                     /locus_tag="WHG62_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ1725255.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLMPTGEGDFVLYERQMRGVMHGDIVTVRPVGIDRRGRCEGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKAKSSASVKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3285..4748)
                     /gene="guaB"
                     /locus_tag="WHG62_001146"
     CDS             complement(3285..4748)
                     /gene="guaB"
                     /locus_tag="WHG62_001146"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ1725256.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4895..7453)
                     /gene="glnD"
                     /locus_tag="WHG62_001147"
     CDS             complement(4895..7453)
                     /gene="glnD"
                     /locus_tag="WHG62_001147"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ1725257.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTADELAKKMNAQRNVPA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATNLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNANRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSTVAQKEDIQDPSVLDAFCKRVQTHERLSALYFLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NNFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQALLEQLA"
     gene            complement(7502..7822)
                     /locus_tag="WHG62_001148"
     CDS             complement(7502..7822)
                     /locus_tag="WHG62_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1725258.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            complement(8147..8620)
                     /gene="bfr"
                     /locus_tag="WHG62_001149"
     CDS             complement(8147..8620)
                     /gene="bfr"
                     /locus_tag="WHG62_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ1725259.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLEKEKEKHEALI
                     AAISVAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(8648..9112)
                     /gene="bfr"
                     /locus_tag="WHG62_001150"
     CDS             complement(8648..9112)
                     /gene="bfr"
                     /locus_tag="WHG62_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ1725260.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(9575..10558)
                     /gene="lipA"
                     /locus_tag="WHG62_001151"
     CDS             complement(9575..10558)
                     /gene="lipA"
                     /locus_tag="WHG62_001151"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ1725261.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPRNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYKKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(10551..11174)
                     /gene="lipB"
                     /locus_tag="WHG62_001152"
     CDS             complement(10551..11174)
                     /gene="lipB"
                     /locus_tag="WHG62_001152"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ1725262.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11176..11451)
                     /locus_tag="WHG62_001153"
     CDS             complement(11176..11451)
                     /locus_tag="WHG62_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ1725263.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            11636..12706
                     /locus_tag="WHG62_001154"
     CDS             11636..12706
                     /locus_tag="WHG62_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ1725264.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
BASE COUNT         2738 a         3060 c         3760 g         3285 t
ORIGIN      
        1 taccgcaaaa cataccataa aaaaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggga taatttatta tttggtgccc gggagaagac tcgaacttcc
      301 acacccatga ggataccagc acctgaagct ggcgcgtcta ccaattccgc cacccgggca
      361 atctaaaata ttgaaataaa gcaaagcatt tgatttggtg cccgggagaa gactcgaact
      421 tccacacccg tgaggatact agcacctgaa gctagcgcgt ctaccaattc cgccacccgg
      481 gctttgcttt atttgctgtt ttgcggtaca gtgtcctgcc gcaaagaagt cgctattata
      541 tagttcataa agagaatgtc aacagtccaa atgaataaaa atattaaatc tttaaattta
      601 cgggaaaaag acccgttttt aagtcgtgaa aaacagcgtt atgaacatcc tttgcccagt
      661 cgggaatgga taatcgaatt gttggagcgc aaaggtgtgc cttcaaaaat cgaatcgctt
      721 gcgcgcgagc tgtcgattac ggaagacgag tatgtctttt ttgaacgccg tctgaaggcg
      781 atggcgcggg acggtcaggt tttaatcaac cgtcggggcg cggtttgcgc ggcggacaaa
      841 ttggatttgg tcaaatgccg cgtcgaggcg cataaggacg gtttcggctt cgccgtaccg
      901 ctcatgccga cgggcgaagg agatttcgtt ttatacgaac gccagatgcg tggtgtcatg
      961 cacggcgaca ttgttaccgt ccgccctgtc ggcatagatc gcagggggcg gtgcgaaggg
     1021 acggttctgg atattgtcga acgcgcgcaa agcaaagttg tcggtcgttt ctatatggat
     1081 aggggcgtgg cgattttgga gccggaagac aagcgtctga accaaagcat cgtattggaa
     1141 ccggacggcg tggcgcgttt caaacctgaa tccggtcagg tcatcgtcgg cgaaattgag
     1201 gtttatcctg agcaaaaccg gccggcagtg gcaaaaatca tcgaagtttt gggcgattat
     1261 gccgacagcg gcatggagat tgaaattgcc gtgcgcaagc atcatttgcc gcaccaattc
     1321 agtgaagcgt gtgccaaagc cgtgaaaaaa attcccgacc atgtacgcaa aagcgatttg
     1381 aaaggccgcg tcgatttgcg cgacctgcct ttggtaacga ttgacggcga aacggctcga
     1441 gattttgacg atgcggtgtt tgccgaaaaa atcggacgca attaccgtct ggtcgtggcg
     1501 attgccgatg tcagccatta tgtccgcccc gatgacgcta tcgacacgga cgctcaggaa
     1561 cgcagcacca gtgtttactt cccgcgccgc gtgattccca tgttgccgga aaacctgtcc
     1621 aacggcatct gctcgctcaa tcctaatgtc gagcgtttgt gtatggtgtg cgatatggtc
     1681 atcacttacg cgggcaatat taaagaatac cgcttctacc ccgccgtgat gcgctctcat
     1741 gcccgcctga cctacaacca agtttggaaa tggctttcag gcggaatcgg gcatccgttc
     1801 aaagcccaaa tcgacacgct ttacaaactc ttcaaaatcc ttcagaaaaa gcgtttcgaa
     1861 cgcggggcgg tggagtttga cagcatcgaa acccaaatgc ttttcgacga caacggtaaa
     1921 attgaaaaaa tcgtccccgt tgtccgcaac gatgcccaca agctgattga agaatgtatg
     1981 ttggcggcaa acgtttgcgc agcggatttt ctgttgaaaa acaagcatac cgcattgttc
     2041 cgcaaccatt tggggcccac gcccgaaaaa ctcgccgcct tgcgcgagca gctcggtctg
     2101 ttggggcttc aacttggcgg cggcgacaac ccgtcgccga aagactatgc cgcgcttgcc
     2161 ggacagttca aaggcaggcc ggatgccgaa ttgctgcaag tcatgatgtt gcgctccatg
     2221 caacaggcgg tttacgaacc gcattgcgac ggacactttg gtcttgccta cgaagcatac
     2281 gcccacttca cctcgcccat ccgccgctat cccgacctga ccgtacaccg cgccatcaaa
     2341 gccgtgttga atcagcaaac ctacacgcca aaaaaaagct ggcaggcttt gggcgtgcat
     2401 acctcgttct gtgagcgccg tgccgacgac gccagccgcg acgtggaaaa ctggctgaaa
     2461 acctattata tgcgcgataa ggtcggcgaa gtattcgaag gtaaaatctc cggcatgacc
     2521 agttttggta tctttgtaac actggacggc atccacattg acggcttggt gcatatcagc
     2581 gatttgggcg aagactattt caacttccgc cccgaaatca tggcaatcga aggcgaacgc
     2641 agcggcatcc gtttcaacat gggggacagg gttgccgtcc gggtcgcccg tgccgatttg
     2701 gatgatggaa aaatcgattt tgtcctgatt gccgagggga gcggcagggg gcggaaagct
     2761 aaatcatccg cgtctgtcaa accggcaggg acggcgggga aagggaaacc gaaaaccgcc
     2821 gccgagaaaa aaacagcccg aggcggcaaa gtaaggggaa ggggcgcgtc tgccgccgca
     2881 gaatcgggga aaaaggcaaa gaaaccggtt ccgattaagg taaaaaaacg gaaaggcaaa
     2941 tcataatgct gacggggtgg cttggggagg gcggggcata ctttcccgaa gccgccgccc
     3001 gattttttga tatggcggcc ggcgcatcat ttcaggccaa tcgaaacgcc cgtattgaaa
     3061 gattgcgttt atttccaccg ccgttttgaa ggccggcggt attcggcaga cggggcgcaa
     3121 acggcgttca gacggcattt tcattctttc ggcgtgtccg tccgaattgc tttgcccgtc
     3181 cgcgcaatca gcccgtgcgg cttgccttga acggacaaaa aatgccgtct gaaacccgaa
     3241 aatcaggttt cagacggcat tttgccttga aaaggctgtt caaatcagcg gtggtagttc
     3301 ggtgcttctt tggtaatttg aacgtcgtga acgtgcgatt cgctcatacc tgcggaagtg
     3361 atttccacaa attctgcttt ttcgtgcatt tcggcaatat tggcgcaacc caaatacccc
     3421 atgctggagc gcagtccgcc ggtcagttgg tggatgatgt tcacaatcgg gcctttgtag
     3481 ggaacgcggc cttcgatgcc ttcggggacg tatttgtcgg tgctgtcggt tttgtcttgg
     3541 aagtagcggt cggcagaacc ttggctcatc gcgcccaagg aacccatacc gcgataggat
     3601 ttgtacgagc ggccttggta gagttcgatt tcgcccggcg cttcttccgt gcctgcaaac
     3661 ataccgccga gcatgacgct gtacgcgcct gcggcgaggg ctttggcgat gtcgccggag
     3721 aagcggatgc cgccgtcggc aatcagcgga acgcccgtgc ctttgagggc ttcggcaacg
     3781 ttgtgaatgg cggtcagttg cggcacgccg acacctgcca cgatacgggt ggtgcaaatc
     3841 gatcccggac cgataccgac tttgacggca tccgcgccgg cggcgaccaa atccaatgcg
     3901 gctttggcag tggcgatgtt gccgccgatg acttggatgt gcggataggt ttctttcacc
     3961 catttcacgc ggtcaatcac gccttggctg tgcccgtggg cagtatcgac gacaatcacg
     4021 tccacgccgg cttcgaccaa ggctttgacg cgctcttcgg tatcgccgcc ggtgccgact
     4081 gccgcaccga cgcgcagacg gccttcggag tctttgttgg cgttgggaaa ctcggtggtt
     4141 tttaaaatat ctttaacggt aatcagacct ttgagttcgt ctttttcgtt cagaaccaaa
     4201 acgcgctcga ctttgtgcgt gtgcatcagt tcgcgcgctt cgtctatgct tgtgccttcg
     4261 gggacggtaa ccagacgttc gcgcggggtc ataatggcgg aaacgggcaa atcgacgcgg
     4321 ttttcaaaac gcaggtcgcg gttggttacg atgccgacga ctttgccgtt ttcaacgacg
     4381 ggcaggccgg acattttgcg tttgcgctgc gcacgcattt ccaagacttc gcggatgagc
     4441 gtcgtcggtg caacggttac ggggtctttg accacgccgc tttcgtggcg tttcactttg
     4501 gaaacggcgc gcgcctgcat ttcgggcggc atgtttttat ggatgatgcc gatgccgcct
     4561 tcctgtgcca tcgaaatggc gaggcgcgcc tcggtaacag tgtccatcgc agcggaaagc
     4621 agggggaggt tgagtgtgat ttcgcgggtg agcttggttt gaagtttaac gtctcgcggc
     4681 agcacggtcg aatgtgcggg aaccaacaaa acatcgtcga aagtataggc tttttctacg
     4741 atacgcataa tgctcggtct ttcagtttgt gcaagatgca cggcattata gcacgttacc
     4801 ggcggcttga cagtttatat tgtttgcaat atcccccgcc ttcaggcggc atacggcgcg
     4861 gcggcggaat gccgtctgaa aaccggcagg gtgcttatgc caactgttcc agcaaagcct
     4921 gtttcaatga ggactggatt tttgggtttt tcaggtcggg gctaaaaacg gtaaaactgt
     4981 cttcggcgcg ttcatccagt gtggagattt tggcatagcg caggctgacg ttgtgggcga
     5041 aaaagacttc cgccatatcg gcgagcagga aggggcggtt gacggcggtg atttcgacgg
     5101 agtaccaatc ggggtagtct tcttcggggg taatggtgat gcttggcgcg atcggcatat
     5161 agcggctgcg gcggctgatg cggcggctat ggctggagat ttcggcaacg gtgtgtccgt
     5221 ggataaagtt gttgagttcg gcttcgagcg cgctttggat gtcggggtag tcttcgggag
     5281 cgtgctgcga ggggatttgc acgatgaagg tgtcgaggat gtagtcgtgt tcggtgataa
     5341 aggcgcgggc ggcgaggata tcgaagccgt ggcggctgaa aatgcggcag aggcgggcga
     5401 acaggcgcgg gccgttgggc ataaaaacca tgacttgaaa gctgtcgctt ttgggcagga
     5461 tgcggctgcg gacgatgggg gtttcaaagt cgtggactag gttggcggcg tgccacagga
     5521 tttcgcggga ctggtggcgg gcgaagtagg cggaaccgag cgcgttccat agttttttct
     5581 gctgtttttc ggggacggcg gcgcgggtga gtaagtcggc ggcttcctgc cggcggcggc
     5641 cgaagagggt gtgcgggttg ccgccgttgc ctgtaaggta gcgtccggcg gcatggaaga
     5701 ggctttccag caggctggcg cgccatgcgt tccacagctt gggattggtg ccgcgtatgt
     5761 cggaaatggt cagaaagtag agcgcgctga ggcgttcgtg ggtttggacg cgtttgcaga
     5821 aggcatcgag tacgctgggg tcttggatgt cttctttttg ggcgacggtg gacataagaa
     5881 gatggttttc aaccagccag gcgagcaggt cgctttcttc ttcggtcagg aagtggtcgg
     5941 cggcaaattg gcgcgcgtct gcgatgcctt gtatggcatg gtcgccgccg cgtcctttgg
     6001 cgatgtcatg gaaaaaggcg gcaaggtaga ggatgtcttg tttttcaaag gactgcatca
     6061 gtgcagaggc gtagggcagc tcgtggctgt gcatatccaa ggcaaggcgg cggacgttgc
     6121 ggacgacggt gaggatgtgg tcgtccacgg gatagatgtg gaacaggtcg tgctggagca
     6181 ggccgacgat tttttcccac gcgggcaggt agcgtcccaa tacgccgtag aggttgagga
     6241 agcgcagggt ttgggtcagt ccgttgccgt tgcggaaaaa gccggcgaag cggtggcgat
     6301 tttcagaatt ttggtagaag ctgcggttga ttttgcgcgt cgcgccccac catgcgcgca
     6361 gggtttgcgg ttcgagcgcg gtaatatcgt tgcgctgctg catgatttcg acgattttga
     6421 aaatgtgttc gggccgtctg aaaaaaatat cggtgtgccg cgcggcgatt tggttgttga
     6481 cttggatgta gtcgtcgtca atccgcaggg taacgcgcaa cggggtggag gaaacgcggc
     6541 tttgcagcat aggcgtgagg atgccgccca gttgtttgac ggttttaatc gcgcggtaaa
     6601 acacgcgcat cagttcttcg ctttggcggc ggaggttcaa gccttcataa cccatgcttt
     6661 cggcgacttg cggctgcaaa tcgaacagca ggcggtcttc ggcgcgattg gcgtttaaat
     6721 gcagatggat gcggatgtgg gcgaggcggc ggtagccgtg cgaaagcata ccggcttcgg
     6781 cacgcgtcaa aatccgctgt ttgagcaggt cgggcaggtt ggtcgccaag ccttgtgctt
     6841 tcgctatcca aagcagggtg tggatgtcgc gcagaccgcc cggacagctt ttgatgtttg
     6901 gttccaatac cgcccctgag ccttgcgatt tggcgtggcg gtgttccatc tccaccagtt
     6961 ttgcctcgac aaacgccggc acattgcgct gcgcgttcat ttttttcgcc agttcgtccg
     7021 ccgtttggcg gttgccaaac aaaaacctag cctctaaaaa cgctgtgtcc cccgtaatat
     7081 cattgcgcac gctttcacat agttcatcaa cgctgccgct ttttacagac ggcatcagtt
     7141 tgcagtccca cagggtttgg acaaaccggg caatctgttc ctgaatgccg tctgaaagcg
     7201 gggcagggga gacaaccgcc aaatccacgt ccgaacaggg atacagttcg ccgcgcccga
     7261 agccgcctac cgccatcagg cataacgcgc tgttttgaaa atactctgcc cacaatgccg
     7321 ccagtaaggt ttcgactgcc gccgtgtatt ctctgaaaaa taccgacacg cggttggctt
     7381 tcaaataatg cgcttcggcg gcatcgcgct gctgtttgaa ggtttccagt gctgaagaca
     7441 ggtttgcagg catttttatt ctttcgattg gcgggaaaaa gggaggcgga tggttcggcg
     7501 gtcaaatacc gctttcagac ggcatttgtc gggtatcggc ggaattggtc atcagcttca
     7561 accgttcctg cggcggcagc agcaactgat acgccgccac gcccaaagcc gccgccattt
     7621 tttcgatatt cgacagggcg atgttccagc gtttgcgctc gactgccgac acataagtcc
     7681 tgtccaaacc gcattgccgc gccaattctt cttgcgacca acccttgttc acgcggaaaa
     7741 gccgcatatt gtatgccaat accgcccgca aatcctgttc gtcaggcagt tcggcaggca
     7801 gagtcaattt gttgcccatc atttgcttcc aaataaatgg ttaaagttaa gcatttgctg
     7861 ttacggattt tacttcacat aaaagccaaa aaaaaggggt ggcggcagcc acacccaaac
     7921 acacacacat caagaggaaa gaggtaacat caagacagat tgggaaacag caaacaagca
     7981 atctagattt catatcggta ttatcaaaca aaaaccgtta tcgagtattg attcaaatca
     8041 attgagattt gattcgcaaa ccggtaaaga aaaacggcat acccgtttat acggatatgc
     8101 cgtctgatga tgcaggggac tgctgtattt ggcagtggtt tgtgttttag tcctcttgcg
     8161 ccgctgtttg caggtagttc ggcaaaccaa ttttgccgat tagttcctgc tgggtttcga
     8221 gccagtcgat gtgttcttcg ttggtgtctt tttgtttttc caacaaatca cggctgacat
     8281 aatcctgttg cgcttctgcc acggaaattg ccgcaatcaa tgcctcatgt ttttctttct
     8341 ctttttccaa atcgcaggcg atgatttctt cggtggactc gccaatcaga agcttgccca
     8401 gttcttgcag gttcggcaga ccttcgagga acagaatgcg ctcgatcaaa tcgtcggcag
     8461 ctttcatttc aacgatggac tgtttgaaga aatgttcgcc cagttcttca aagccccagt
     8521 ttttcaaaat acgggcgtga aggaaatatt ggttgatggt taccagcagc aagcctaagt
     8581 ttttgtttag ctcgcggata accagacggt cgcctttcat acggactcct tttattccga
     8641 atacggatta cagttggctt tggtagtagt tgccttcgcc aattaactcg atcaggcgaa
     8701 gctgctgttc cagccagtgg gcgtggtctt cttcggtatc tttcagttgg gcaaccatca
     8761 ggtcgcgcgt aacatagtct tgagcctctt cgcacagttt gatgcctttt ttcaacgcat
     8821 cacgtacttc atattcggtt tgcaggtcgg ctttgaggca ggaaaccacg tccgtgccga
     8881 tattcagttc ggcgcgtgcc attttcggcg tgccgcccag catcaggatg cggcggatga
     8941 agtcttcggc gtgtgtggtt tcttcttcca tctcgtgatt gagacgttca aaaagtttgg
     9001 tgtagcccca ttcggagtag aggcgggagt ggataaagta ttggtcgcgt gccgccagct
     9061 cgccagacag caattcgttc atataatcaa caacagcttg attgccttgc ataatatctc
     9121 tctttctgta acttggtttt cggtatgtct gaacagcatc tgtgtcgcta ttcgggatgc
     9181 gtgcattgta tgcaaaagct gtcggcatga caaattttct atttaaaata caaacaatta
     9241 tcaaaagaaa tagggcgtat tccccgatgc cttccaaatc agtatgctgt ttcttatcgg
     9301 tttttttgct gctaaaacta agaatccatc tcatccataa agaacattta cacttattaa
     9361 ccatagcaaa aaacaaatag agcacggttt tttatcaaaa tttataatga atcgttctca
     9421 ttaaccgaca gattcttttg agattatcgg attttgggaa taaattatgc cgtctgaggg
     9481 gctttcagac ggcatagata attaaagctg attaaacaac gcggcagaca gcagcgtagg
     9541 aaattatttt ttacttcgga acggtatttt gggtttaatg atgcccgcaa ccgccgtggc
     9601 tttccctcaa ggcttccgcc gcctgttcgt cggcgtggta gctggaacgc accatcgcgc
     9661 cgatggcggc attgctgaag cccagttcgt atgcttcttt ttcaaagatt ttgaactgct
     9721 cgggcgtaac gtagcgcaag acgggcaggt ggccgtctga aggttggagg tattgtccga
     9781 tggtaatcat ctcgatattg tgcgcccgca tatcgcgcat aatttcgcgc acgtcttcgt
     9841 ctgtttcgcc caagccgacc ataatgccgg attttgtggg aatatgcggc atcatttctt
     9901 tataacgttt taataagtct aaagaatgtt gataattggc gccggggcgg gcttttttgt
     9961 acaggctggg atgggtttcc aggttgtggt tcatcacgtc gggcggggtt tcggcaagga
    10021 ttttgagcgc gatgtccaag cggcctcgga agtcggggac gaggatttcg attttggtat
    10081 tcgggctggt ttcgcggatg gctttgatgc agtcggcgaa atgctgtgcg ccgccgtcgc
    10141 gcaggtcgtc tcggtcgacg gaggtgatga cgacgtaacg caggttcatg gctttgacgg
    10201 attcggcgag gtttctcggt tcgtcggggt cgagcatatt gggccgaccg tgtcccacgt
    10261 cgcagaacgg gcagcggcgg gtgcagatgt cgcccataat catgaaggtc gccgtgcctt
    10321 tgctgaagca ttcgccgatg ttggggcagg aggcttcctc gcaaacggtg tgcatttttt
    10381 gttcgcgcaa aatgtctttg atttcaaaga atttgcgcga tggaagtttg gcgcgtatcc
    10441 attcgggctt ttttaatttt tcctgaaggg ggacgacttt gatggggatg cgggcggttt
    10501 tgtccgcgcc tctgagtttg atgccgcgtt tggggtcgtc ggttttgatt tcactcattg
    10561 ttgtctgctt tcggtgtgaa ttgtgtttca aggtgtgcgg tgagtttggc ggcgacttcg
    10621 tccggcgtgg ggcagggttg gacaaaatcc gcgatttgcg tcatttccat accggcgtag
    10681 ccgcaggggt tgatgtgggt aaacgggctt aaatccatat tgacgttgag cgcaagcccg
    10741 tgatagacgg agccgttttt gatacgcagc cccagtgagg cgattttgcg ttctccgaca
    10801 taaacgccgg ggcgtttggg gtctgccgcc gcttcgatgc cgtattctgc caatgtggcg
    10861 atgatgctgt tttcaagcgc ggaaacgatg ttgcggacgc tggttttgcg ccgtttgaaa
    10921 tcaatcatcg tataaacgac caattgcccg ggcccgtgat aggtaatctg cccgccccgg
    10981 tcgatttgga cgacgggaat gtcgtcgcga atcagcaggt gttcgggttt tcccgccagt
    11041 ccttgtgtga acacgggcgg gtgttcgacg acccacagtt cgtcttcggt gtcagcattc
    11101 cgtccggcat taaaggtttt catcgcttca aaagtcggca gatattcgac caaacctttg
    11161 tgtatgattt tcatctcaaa gtaccacttt gaccagttcg tgcgaagtca gcgcgcggta
    11221 gatgttgtcc aattgttctt ggttttcaac ctttacctga acggtggcgc cagtatagtt
    11281 gcctttgctg ctcggacgcg tggtgatgtg gtgcgcctgc gtgtcggggg cgtggaggcg
    11341 gacggtgtcc aataccgcct gctcgaactc gggatgcacc gcgcccatta ctttcaatgg
    11401 gaaggtgcag ggaaattcga tgagggatgt tttgtttttt tgttcggtca tgatgtgctg
    11461 ccttgtcgtg tacggtatgc cgtctgaagg cgggtttgcc tttcagacgg catcggatgt
    11521 gcgttatttt agcctaaacc gcgataacag gctatcggga aggcggaggc ttttttgacg
    11581 gcacggcggt tctgctatac tggcgcacaa tattattttt agaagggtgg tttttatgta
    11641 tcggaggaaa gggcggggca tcaagccgtg gatgggtgcc ggtgcggcgt ttgccgcctt
    11701 ggtctggctg gttttcgcgc tcggcgatac tttgactccg tttgcggttg cggcggtgct
    11761 ggcgtatgta ttggaccctt tggtcgaatg gttgcagaaa aagggtttga accgtgcatc
    11821 cgcttcgatg tctgtgatgg tgttttcctt gattttgttg ttggcattat tgttgattat
    11881 cgtccctatg ctggtcgggc agttcaacaa tttggcatcg cgcctgcccc aattaatcgg
    11941 ttttatgcag aacacgctgc tgccgtggtt gaaaaataca atcggcggat atatggaaat
    12001 cgatcaggca tctattattg cgtggcttca ggcgcatacg ggcgagttga gcaacgcgct
    12061 taaggcgtgg tttcccgttt tgatgaggca gggcggcaat attgtcagca gtatcggcaa
    12121 cctactgctg ctgcccttgc tgctttatta tttcctgctg gattggcagc ggtggtcgtg
    12181 cggcatcgcc aaactggttc cgaggcgttt tgccggtgct tatacgcgca ttacgggtaa
    12241 tttgaacgag gtattgggcg aatttttgcg cgggcagctt ctggtgatgc tgattatggg
    12301 tttggtttac ggcttggggt tggtgctggt cgggctggat tcggggtttg caatcggtat
    12361 ggttgccggt attttggttt ttgttcccta tttgggcgcg tttacaggac tgctgctggc
    12421 aaccgtcgcc gccttgctcc agttcggttc gtggaacggc atcctatcgg tttgggcggt
    12481 ttttgccgta ggacagtttc tcgaaagttt tttcattacg ccgaaaatcg tgggagaccg
    12541 tatcgggctg tcgccgtttt gggttatctt ttccctgatg gcgttcggac agctgatggg
    12601 tttcgtcgga atgttggcag gattgccttt ggccgccgta accttggtct tgcttcgcga
    12661 gggcgtgcag aaatattttg ccggcagttt ttaccggggc aggtaggcgg ttccgaaaca
    12721 tatttgaagc gggatacaac cctgcccggg tttaaatata gtggattaac aaaaatcagg
    12781 acaaggcgac gaagccgcag acagtacaga tagtacggca aggcgaggca acgccgtact
    12841 ggt
//
LOCUS       DAWGBY010000048        12733 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.048, whole genome shotgun sequence.
ACCESSION   DAWGBY010000048 DAWGBY010000000
VERSION     DAWGBY010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.048"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     repeat_region   375..1796
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=573..608
                     /rpt_unit_seq="gttgtagctccctttctcatttcgcagtgctacaat"
     gene            complement(1860..2186)
                     /gene="cas2"
                     /locus_tag="WHG62_001155"
     CDS             complement(1860..2186)
                     /gene="cas2"
                     /locus_tag="WHG62_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEZ1725265.1"
                     /translation="MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLS
                     VYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNS
                     DQLLLF"
     gene            complement(2179..3093)
                     /gene="cas1"
                     /locus_tag="WHG62_001156"
     CDS             complement(2179..3093)
                     /gene="cas1"
                     /locus_tag="WHG62_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEZ1725266.1"
                     /translation="MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIEN
                     RETLITAPLLSALAKHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKK
                     QLWQHIVRQKILNQAFVADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALF
                     GEKFTRNDNNAVNAALNYTYAVLRAAVARALTLYGWLPALGLFHRSELNPFNLADDFI
                     EPLRPLADLTVIHLYEQGRLKTELTLGIKQHLIKILYYQTSIERQHFSTLAAIDKMIS
                     SFQAGVTDKNAKQLKLPEILPLKEYQYE"
     gene            complement(3160..6408)
                     /gene="cas9"
                     /locus_tag="WHG62_001157"
     CDS             complement(3160..6408)
                     /gene="cas9"
                     /locus_tag="WHG62_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEZ1725267.1"
                     /translation="MAAFKPNPINYILGLDIGIASVGWAMVEIDEEENPIRLIDLGVR
                     VFERAEVPKTGDSLAMARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGL
                     IKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLK
                     GVADNAHALQTGDFRTPAELALNKFEKECGHIRNQRGDYSHTFSRKDLQAELNLLFEK
                     QKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPAEPKAAKNTYTAER
                     FIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYAQARKLLGLEDTAFFKG
                     LRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSPELQDEIGTAFSLFKTD
                     EDITGRLKDRIQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYG
                     DHYGKKNTEEKIYLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETARE
                     VGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKC
                     LYSGKEINLVRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFN
                     GKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEEGFKERNLNDTRYVNRFLCQFVA
                     DHILLTGKGKRRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQK
                     ITRFVRYKEMNAFDGKTIDKETGEVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFE
                     EADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGQGHMETVKSAKRLDEG
                     VSVLRVPLTQLKLKDLEKMVNREREPKLYEALKARLEAHKDDPAKAFAEPFYKYDKAG
                     NRTQQVKAVRVEQVQKTGVWVRNHNGIADNATMVRVDVFEKGGKYYLVPIYSWQVAKG
                     ILPDRAVVQGKDEEDWQLIDDSFNFKFSLHPNDLVEVITKKARMFGYFASCHRGTGNI
                     NIRIHDLDHKIGKNGILEGIGVKTALSFQKYQIDELGKEIRPCRLKKRPPVR"
     gene            complement(6686..10120)
                     /gene="dnaE"
                     /locus_tag="WHG62_001158"
     CDS             complement(6686..10120)
                     /gene="dnaE"
                     /locus_tag="WHG62_001158"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ1725268.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     EAYVGKDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGMNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPDQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVRDKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMNNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQIEIMVSGQTLENCADYLKSDQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDIGGLVRLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            10654..10887
                     /locus_tag="WHG62_001159"
     CDS             10654..10887
                     /locus_tag="WHG62_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ1725269.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            10865..11068
                     /locus_tag="WHG62_001160"
     CDS             10865..11068
                     /locus_tag="WHG62_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725270.1"
                     /translation="MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            11173..11574
                     /locus_tag="WHG62_001161"
     CDS             11173..11574
                     /locus_tag="WHG62_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725271.1"
                     /translation="MAIYDLNEIVTSAALGMYKGKWQNMDFEQVLQDIVQETDFTYSW
                     EYGENWAIFCLNEKSVGMLCKQIPFAIIENEKLSQKIYQEYPWILTQQVYHFDTDKIL
                     LNKYVCKLTIGIMSAISQEPISLQDLYVDTV"
     gene            11882..12718
                     /locus_tag="WHG62_001162"
     CDS             11882..12718
                     /locus_tag="WHG62_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ1725272.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGVGIEVH
                     SGNCCKNDRLNYALLAERFGMLASAGSDFHRLNNFSGGILGACPELPENCRPVWEHFS
                     RH"
BASE COUNT         2833 a         3077 c         3282 g         3541 t
ORIGIN      
        1 tttgcaagat tttagtttaa tcatcaaaca gggaacagca aaaatccccg ctgcaacggg
       61 gatttttgtt cggctctcgc ctgtgtgatt aacttcacta ggagaagcta aaatgcttaa
      121 attccttatg cgtgggaaaa agttgctgct gtccgttgaa gtgaaccaca agttcatttt
      181 agcggttgct ttgctgttaa gtcaatgcag tagctaaccc gaccacaatc aaaaaaacgc
      241 aagttttccg cctactctgt gagtgggcgg ttttttctta tttcaaatct gtgacacaat
      301 atctgtcgcc tttcttgcca taattgcact gtgtctcaat gactttaacg cacgttcgct
      361 tatcgcaacg gctggttgta gcgcccattc tcatttcgca gtgctacaat gcggaacggg
      421 ttgacagact gaatttgagt gttgtagctc ccattctcat ttcgcagtgc tacaataatc
      481 agaccgactt tacaacgaag gtttgagttg tagctccctt tctcattttg cagtgctaca
      541 atacgtgagt ttgtctatga gttcgacggc gtgttgtagc tccctttctc atttcgcagt
      601 gctacaattg ctaccagcga caacaggcat tacgcccagt tgtagctccc tttctcattt
      661 cgcagtgcta caatccgacc gtgggaacga cggtatagtg gattgttgta gctccctttc
      721 tcatttcgca gtgctacaat taaaaagata ctcattctgc ctccgtatta gttgtagctc
      781 cctttctcat ttcgcagtgc tacaataacg gcaacccact aaattttgca aatgcggttg
      841 tagctccctt tctcatttcg cagtgctaca attaacgatt gaaaatgagt acgcattaag
      901 tagttgtagc tccctttctc atttcgcagt gctacaatga acacttgagc aatttaatac
      961 gcgaacaagt tgtagctccc tttctcattt cgcagtgcta caattgattc tcgcctatat
     1021 gaaacggaac agttgttgta gctccctttc tcatttcgca gtgctacaat tctatcttaa
     1081 tttctctttg ttcttcttta gttgtagctc cctttctcat ttcgcagtgc tacaatcatt
     1141 gcgcccattt tgtctatccg aacaatgttg tagctccctt tctcatttcg cagtgctaca
     1201 ataccaccgc cgcttatata gaaaagctgt aagttgtagc tccctttctc atttcgcagt
     1261 gctacaataa aaaagttgcg ggataagtta cagtttgagt tgtagctccc tttctcattt
     1321 cgcagtgcta caattaattg atttttaagg ttaatcagtt tttggttgta gctccctttc
     1381 tcatttcgca gtgctacaat ctattttcct gcacctacaa cccccgaacg gttgtagctc
     1441 cctttctcat ttcgcagtgc tacaatcttt ctgtgcgatg tattgaaaaa gctgaggttg
     1501 tagctccctt tctcatttcg cagtgctaca atatgctgga tacggcattg atgctgcaac
     1561 ttgttgtagc tccctttctc atttcgcagt gctacaattt gcaatccaag gcttcaaaat
     1621 ggcttggagt tgtagctccc tttctcattt cgcagtgcta caatcgcctg acctaatata
     1681 accatatgga aaaagttgta gctccctttc tcatttcgca gtgctacaat ataccgtatc
     1741 ctcgcaatca ggcttgaatg gttgtagctc cctttctcat ttcgcagtgc tacaatactt
     1801 cgacgggaaa tccttatttc ataagggttt cccgttttat ttgttatgaa aaaatgggct
     1861 taaaataaca ataattggtc tgaattgacc tttttttctt gggttttcag ctcgcccaac
     1921 agcagtttca tggcggcata ttgcttttct gttatctcca aacagcggat tgagccttct
     1981 tgcggaaggt ttgcacacag tctgttgtgg tgtttttgca acgaatcgcg gcctttgacg
     2041 atacggctgt atacggaaag ttgcagcatt tggtatccgt cttttaataa aaactggcgg
     2101 aattgattgg cggctttgcg ctttgccgcc gtgataaccg gtaggtcgaa gaagacgata
     2161 atcctcataa atttggcctc actcatattg gtattctttc aatggtagga tttcaggcag
     2221 tttcagttgt ttggcgtttt tatcggttac gccggcttga aatgacgaaa tcattttgtc
     2281 gatggcagcc aaggtgctga aatgttgccg ttcgatgctg gtttgatagt agaggatttt
     2341 gatgaggtgt tgtttgatgc cgagcgtcag ttcagttttc agacggcctt gttcgtacaa
     2401 atgtatcacg gtcaggtcgg ccaatgggcg taagggttcg ataaagtcat cggcgagatt
     2461 aaatggattg agttcacttc tatgaaacaa gcctaatgca ggtaaccaac cgtataaggt
     2521 cagggcgcgt gcaactgcgg cacggagtac ggcgtaggtg tagttcaatg cggcattgac
     2581 ggcgttgttg tcattacggg taaatttttc tccaaagagg gcttgaaagt agagggcggc
     2641 agcttgggct tcacggtttc ctgtatcgcc tgaacggact tcagatgcca aagtgcgcag
     2701 ccgtttggct gcaagatcat tgcctgtttc gtctgcgaca aatgcttggt tcaggatttt
     2761 ttggcggacg atatgttgcc agagttgctt ttttaagggt tcgcttatgt tcagttgcag
     2821 tttgaggatt ttaagttggc ggtgatattg ggcataaggc agccattgtc cgcagggcag
     2881 gaactgctcg tcgcaggtca gcagggttgc accatgcttg gctaaggctg ataggagcgg
     2941 ggcggtaatc agggtttcgc gattttcaat gatgataacg gcgatgtcct ctaatggtac
     3001 ggtgtgggac tcgccgtttt gttgaatcag cagttgccgg cgttgcaagg atagtttgcc
     3061 gccgttttga ataagcaggc tgcgccaagt catgtttttc cccttatttt tatataaaaa
     3121 atccctgctt caggcagtct gaaacaggga tagattaatt taacggacag gcgggcgttt
     3181 tttcagacgg catggtctga tttctttgcc cagttcgtca atttggtatt tttggaatga
     3241 aagggcggtt ttgacgccga taccttccag tattccattt ttgccaattt tatgatcaag
     3301 atcatgaatg cgtatattga tattacctgt gcctcgatgg cagctggcaa agtaaccaaa
     3361 cattctagct ttttttgtta taacctcgac taaatcatta gggtgtaatg agaatttaaa
     3421 gttgaaacta tcatcaataa gttgccaatc ttcttcatct tttccttgta caacagccct
     3481 atccggcaaa atccctttcg ctacctgcca actgtaaatt ggtacaagat aatatttacc
     3541 gcctttctca aacacatcta cacgcaccat ggttgcgttg tcggcaatac cgttatggtt
     3601 gcgcacccat acgccggttt tctgtacttg ctctacgcgt acggctttta cctgttgggt
     3661 gcggttgcct gctttatcgt atttgtaaaa cggctcggca aaggctttgg caggatcgtc
     3721 tttatgtgct tccagccgtg ctttcagtgc ttcgtatagc ttaggttcgc gctcccgatt
     3781 gaccattttt tccaagtctt tcagttttaa ctgtgttaac ggtacgcgca acacgctgac
     3841 gccttcgtcc agtcgtttgg cggatttgac ggtctccata tgcccttgcc cgctcatctt
     3901 ccgattgggc gcgcgtgaaa caaacagtgg cgtaacgtat tcgtgtacgg cttcggggcg
     3961 agatgataat ttttcggcaa gcaacgtgcg cagtttttct ggggtatcgg cttcttcgaa
     4021 ttcgggtttg ccgtccggtt tgccgaagac gcgaatcatg acttcttgtg cgaaaaattc
     4081 ccaaggttgt gggaagtgtg ttttttgatg cagcacttct cctgtttctt tgtctatggt
     4141 tttaccgtca aacgcgttca tctctttata gcgtacaaaa cgggtaattt tctgctgcat
     4201 ggcaacggtc gagcaggcaa cgacgacggc gtccaaggcg tgatggcggt cgttttccgc
     4261 acgcactttg cgcaatcccc aaaagccgcg caacagattg gtaatttgtc cgtttgaggc
     4321 aaagacacgt cttttccctt tacctgtcag caatatatgg tcggcaacaa attggcacag
     4381 gaaacggttg acgtagcgcg tgtcgttcaa gttgcgttct ttaaatcctt cttcatcgaa
     4441 tttttgcagc agaatccgtt gttttttact gcgcgggaaa cggctggttt cgacacgcgc
     4501 tttaaattcc tgccattcgc ggctgttgtc tttgccgttg aagtattcgt aaggggtttg
     4561 attgcctttg ttttggtttt cgctgcccaa taccagtact ttattgttga aactgtcgtc
     4621 ccatgtgcgc gagaacggca gggcatggtc gatttcgaca tagccttttt cgttcagacg
     4681 gactaagttg atttctttgc ccgaatacag gcatttgccg tgttgttgct cgtacaggcg
     4741 cagtttcaga atatctttgg atttgggttc gccgacaaaa ttggggaaat actctcggaa
     4801 tttggcggcg gctttttccc tgtctttgcg gttttcttct tggcgtttct caatttcttt
     4861 gcggtcttta aacgatttac ctacttccct tgcagtttca atatggatac gagctgggga
     4921 gccgtaacgg cgtaccacgc cgttaatgac cttacgtgct tgagataagg cgcgcaagac
     4981 gacggggttg cggatttcgt cggcgggaat cggcggcaga taaatctttt cttccgtatt
     5041 cttcttgccg taatggtctc cgtagatttc ggcgcaggct tcatcgtaac gtttgccttg
     5101 ttccattaga ggcacaattc ggcgcaatgc tttcaaggaa atttggacga acttatcgaa
     5161 gctgatgtgt ttcaacagcg cttctaagat ttcgggctgt atacggtctt tcagacggcc
     5221 tgtaatgtct tcatcggttt tgaacaggga gaatgccgtg ccgatttcgt cttgtaattc
     5281 gggagaaagg tttaatgggg attttttgtc tttcaatcct tctttttcca gtgcacggct
     5341 gatggcatgg taggccttca tttccatcaa tgttgaggct tcggcattgt ctttaccata
     5401 gcgcaagcct ttgaaaaagg cggtatcttc taaacccagc agcttacggg cttgtgcgta
     5461 agtcagtttg gattttctgt atggctcgtc cataagcgtg gcgcgttcgg tatcggtcaa
     5521 tggccgctcg ctgccttgct ctaaaatacg caggttgttc agcttggtca gccagatgaa
     5581 acgttcggct gtgtaggtgt ttttagcggc tttcggctct gccggttcga aggtgcaatg
     5641 ccccaacatt ttttgaacgg catcgccgga cagggcaggg cgttgcgtca tcagtagggt
     5701 ttcaatacct tctttaaggc cgcctgaaac atgcggattg ccgaattctt tttgtttttc
     5761 aaacagtaaa ttcagctccg cctgcaaatc tttgcggctg aacgtatgcg aataatcgcc
     5821 gcgttggttg cggatatggc cgcattcttt ctcaaattta tttaaagcca attcggccgg
     5881 tgtgcggaaa tcgcctgtct gtaaggcatg ggcattgtcg gctacgcctt tgagcaaagc
     5941 gccaagctct ttatcggcag tttcgccctc gttttttctt tgcgacaaat aaccgcggtg
     6001 tttgattaaa tgcaataaga ctgccgacca ctctaaaggc gtcagtttgc ggtctaatgc
     6061 ggctgcgcga agttgccatg gtgtattcgg taaggatttg atcaagccgt tttcgtcaaa
     6121 atcagcggct tgtaatacgc cttcgcgttt caataggcgg cgggcccgaa gcaggcgatg
     6181 ggcgcgacgg cgggtcaggc ggcggacact gcgcgccaaa cgccttgcca tggcaaggga
     6241 gtcgcctgtt ttcggtactt cggcacgctc aaatacgcgc acgcccaaat caatcaggcg
     6301 gatggggttt tcttcttcgt caatttctac catcgcccag ccgacggatg cgatgccgat
     6361 atcgaggccg aggatgtagt tgattggatt aggtttgaag gcagccattt attactccgt
     6421 aaacaacgtt gcaaataatg ataatatatc ttattgtctt atttatatac aaatagatta
     6481 ttgacttatc atctcacaac ggctagaatc ccaaacatat tgtcgcactg cgaaatgaga
     6541 accgttgcta caataaggcc gtctgaaaag atgtgccgca acgctctgcc ccttaaagct
     6601 tctgctttaa ggggcatcgt ttatttcggt taaaaaatgc cgtctgaaac cgattttggg
     6661 cttcagacgg catttatatt ttgggttacc agttgacgcg caccgaccgg ctgccgagca
     6721 atgtttccag ttcgccgaac aatgcggagc tcggtgtaac cgtccatttc ggcggcactt
     6781 gaagcctgcc cgacgctttt tcgttggcat acgacagttg cagcgggatg cgcggcgtgt
     6841 cgggcagttg gtgggcggcg agcagccgta ccagtccgcc gatgtcgtgg ccgggggcga
     6901 gggcgaggct gaggctgcgg gcgtagcgtt cgcgcgccat ttgcagggtc atgacttggt
     6961 ttgccatgat gcgtagtccg tcgccgccgc catagtcgtc gcggctgact ttggattcga
     7021 taatcagcac ttggtcggat ttgaggtagt cggcgcagtt ttccagcgtc tggccgctga
     7081 ccatgatttc aatctgcccg ctcaaatctt cgaggctgac gaaggcgatt ttgccgcgtt
     7141 tgcccatcat ggtgcgtacg gcggtaacaa acccggcgag gcgcacgctg tcttgcggtt
     7201 tgagtttcga cagtttctgc ggggcgattt ggcggacttc ttgggcatac gggccgaacg
     7261 ggtggccgga caggtaaaag ccgatgacgg ttttttcttc ggcgagtttt tccgattcgc
     7321 tccacatcgg cgcgtcaatg agccgcaccg gttcgatggc gtcttccatc atgtcgaaaa
     7381 gcccgccctg attggcgttg gcggcttttt ggtcggcgtt gttcatggcg aggtcgatgt
     7441 ttgccaagag catggcgcgg ttgggttcga tgctgtcgaa cgcgccgccg cgtatcaggg
     7501 cttcgagggt gcggcggttc atgtgttctt tgccgacgcg ctcgcagaag tccaacaggc
     7561 cggtaaactt gccgccgctt tgccgcgcgg cgatgatgga ttcgacggcg gcttcgcccg
     7621 tgcctttaat cgcgccgagt gcgtagcgga ttttcatgtc cggatacggc gtgaagcggt
     7681 agtcggattc gttgatgtcg ggcggcagga actcgatgcc gttggcacgg cagtcgtcgt
     7741 agaaatgctt gagctggtcg gtgttgtcca attcggacga catggtcgcc gccataaatt
     7801 cggcggggta gtgggctttg agccatgcgg tctggtagga aatcagggcg taggcggcgg
     7861 cgtgggattt gttgaaaccg tagccggcga atttttccat gtagttgaag atttcgtcgg
     7921 atttttcgcg cgaaatgcct tgttttgccg cgccttcggc gaagatttcg cggtgtttca
     7981 ccatttcttc gggttttttc ttacccatag cgcgacgcag caggtccgcg ccgccgagcg
     8041 agtagccgcc gataatttgc gccgcctgca tcacttgttc ctgatacacc ataatcccgt
     8101 aggtcggcgc gaggatgcct tcgagcagcg gatggatgta ttggaattcc tggcctttca
     8161 tgcgcgcgac gaagtcgggg atgttgtcca tcgggccggg gcggtagagc gatacgaagg
     8221 caatcagttc ttcaaacttg gtcgtgtgcg ccgttttcag catttttttc atgccggtcg
     8281 actcgaactg gaacacggcg gtggtgttcg catctcggaa gatttggtag gcggcttggt
     8341 cgtcgagcgg aatcttgccg acatcgatga tatcgccggt ggtgtttttg atgttgttct
     8401 gcgccatttc gataatggtc aggttacgca gacctaaaaa gtcgaatttc accaaaccca
     8461 cgtcttccac gtcgcccttg tcgtacatgg atacgggaga ggcggattca tccgcctgat
     8521 acacggggct gtaatcggaa atcttgcccg gcgcaatcaa cacgccgccc gcgtgcatac
     8581 ccagaccgcg cgtcaaatct tccagctttt tcgccagcgt aatgagttcg tccgcttctt
     8641 ccgcttcgat taattcctga atctgcggct ccgccttcat cgcgtcgtcc aaactcaggg
     8701 gtttgttggc ttccaacgga atcagcttgg acagtttgtc gcacagcata aacggcagct
     8761 ccaacacgcg ccccacgtcg cggatgaccg ctttggacga catcgtgccg aaggtaacaa
     8821 tctggctgac cgcctgagcg ccgtatttat cgcgtacata ttcgatcacg cggccgcggt
     8881 ttgcctgaca gaagtcaacg tcgaagtcgg gcatggagac gcgttcgggg tttaagaaac
     8941 gttcgaacag cagcgcgtat ttcagcgggt cgaggtcggt aattttcagc gaatacgcca
     9001 ccagcgaacc cgcgcccgaa ccgcgtcccg gcccgaccgg acagccgtgc gttttcgccc
     9061 agttgataaa gtcttgtacg ataaggaaat agccggggaa tttcatctgg atgatgatgt
     9121 tcagctcaaa atccaaacgt tcctgatatt ccggcatttt tgccgcacgc tccgcctcgt
     9181 cgggataaag ctgaaccatg cgttcctgca agcccttgtt tgagagtttg atgagatagt
     9241 catcgcgcga taaaccgtcg ggcgtgggga aaaggggcag gaagtttttg cccaatgtga
     9301 tgtgcaggtt gcagcgtttg gcgatttcca ccgtgttttc caaggcttcg ggcaagtcgg
     9361 cgaaacgctc cagcatcgtt tccggcggaa tgaaaaactg gtccggcgtg aaatcgcgcg
     9421 gacgtttttt gtccgtcaat acccagccgc ccgcgataca cacccgcgcc tcgtgcgcgt
     9481 tgaaatcgtc gcggttcata aactgcgtcg gatgcgtcgc caccaccggc aaacccagtt
     9541 cctccgccag cttcacgctg ccggaaacgc aagcctccca ttcggggcgt tcgggcaggc
     9601 gttgcagctc taaataaaac gcatcgggaa accatgccgc atatttcaac gccgccgcgc
     9661 gcgccgcgtc ttcattgccg ttcaacagat tcatgcccac ttcgccgtaa tgcgcgccgc
     9721 tcaaacaaat caagccgctg ttgtcgccgt tttccagcca ttcggggttg agttccgcat
     9781 gatggatatt gcggtctttg ccgacatagg cctctgtcaa aagctcgctc aaacgcagat
     9841 agcccgcatc gttgcggata atcagcatgg cacggaacgg cttgtcgggc gcattcggat
     9901 tgcctatcca cacgtccgcc gcgccgatgg gcttaatccc tgcgccgcgg caggctttat
     9961 agaatttcac caagccgaat tcgttcatca aatcgctgat gcccaaagca ggcaaaccgt
    10021 attcctgcgc tttggcaatc agttttttaa tccgcaccat accgtcggta atcgaaaact
    10081 cggtatgcag gcgcaggggg atgtaggtcg gctcggtcat ggcaaaatcg gcgtgaacaa
    10141 taaaaggcgt attgtagcag ggttgtcttt tagatggcgg tgtaggtaat gccgtttcag
    10201 attcagacgg catgacctgc aaatgttttt gagcttttac gacggcaaaa aaatgcctcc
    10261 taccgtgtgg tggaggcttc ccaaggagta ttgatagata taaagaacta tcaaactagt
    10321 tataaataac tatatacctt attcggacgg atggcaagca gttaaattaa ttttacgttc
    10381 aaacaggttt ttgatttcgt tttgatgccg atgaccagtg tatcgggcag ttcgtgtttg
    10441 aggatgtgca tcagcgtcaa tgcggattcg tcggggaaca ggatttgcag cctgctgttg
    10501 ggcaggattt ctttgatcgg atgacggcat atggggtttc agacggcatt tttacggaac
    10561 aggcggggcg ggatgtgctg cctgttttgc ggtaattttg ggtacggcgg cggcaggtgc
    10621 tacaataacg gcctctttct gcaagggaac attatggaag ccaccgtcta tctcgaagac
    10681 aacgaataca tcgccctgtg cgacctcttg aaattggccg gacttgccga aagcggcgga
    10741 caggcgaagg cgttgattgc cgaagggttg gtgtcgcgca acggcgaaac cgaaacccgt
    10801 aaaaccgcca aaatacgcgg cggcgaagtc atcgagtttg acggtgcgcg cttggaaatc
    10861 gccgatggat atgaccctga agcataaagc cgaagccctt ttgggcgagc cgcttttaga
    10921 cgaacccgtc cgacccgagt cgtgggaatg ctgcggcagc gactgcggcg aggcgtgtat
    10981 tcagacgatt tattgggcgg ataaggcccg ctacgacgcg caacggcgga aattgaaaga
    11041 agcgggttgg tcggacgatg ccgtctgaaa acggaaccaa catctactat taatgtgtat
    11101 agaggggaac ctaatgggca tactggtctc agtcctatac atgtctcacc tagaaattag
    11161 caaggaacat aaatggctat ttatgactta aacgaaatag taaccagtgc cgcattaggt
    11221 atgtataaag gtaaatggca aaacatggat tttgagcaag ttttacaaga tattgttcag
    11281 gaaacagatt ttacatactc ttgggaatat ggggaaaatt gggctatttt ctgtctaaac
    11341 gaaaagtctg ttggtatgtt atgtaaacag atacctttcg cgattataga gaatgaaaaa
    11401 ttatcacaga aaatatacca agaataccct tggatactaa ctcaacaagt ttatcatttt
    11461 gatacagata aaattttatt aaacaaatat gtatgcaaat taactattgg aataatgagt
    11521 gccatcagcc aagaacctat atctttacaa gatctttatg tagatactgt gtagatgtac
    11581 atagtgagaa ctcgctgttt gaaattgagt taggaattcg caatccaaaa ttggtacaag
    11641 agctagaaca acaattaatt gaagcatatg atttaatgga tacagcagga taactaacta
    11701 atgcaaacaa ataatgtacc catccccact ggctctatcc gcacattcgg gggttgggaa
    11761 tgacggcata gcggcttttc ctttgcattt gccatacacc tgttttttaa aatgaccgcc
    11821 gccgccacac cgcccgacaa tattgccccc cgaccttcat tcaccacaca tataacaccc
    11881 catgatagac ctgcactgcc attccaccgt ttccgacggt atgctttccc ccgccgaagt
    11941 cgtccgcctc gcgcatcaaa acggctgcac gctgctggcg ttgaccgacc acgaccacac
    12001 cggcggcatc gccgaagcgc gtgccgaagc cgacaggctc gatttgcgcc tgattaacgg
    12061 cgtggaaatc tccgtcactt ggcgcgggcg taccatacac gttgtcggtt tggatttcga
    12121 cgagcaggac gagaacctgc aaaacttgtt ggcgcaagtg cggcaaggcc gtctgaaacg
    12181 tcttgaagcc atcgccgcca agctggaaaa acgcggcatt tcgggcgcat acgacggcgc
    12241 gctcgcgctg gcggcaaaca aagaaatggt cagccgcaca cacgtcgccg agttcctcat
    12301 ccaagcggga catgtcaaaa acaagcagca ggcgttcacc aaatacttgg gcgacggcaa
    12361 atcctgcgcc gtccgacacg aatgggcgac gctggaagac tgcgtctccg ccgtcaacgg
    12421 cgcgggcggc atggcagtca tcgcccaccc catgcgctac gatttgtccg ccaccgccaa
    12481 gcgcaatctg tttgaagaat ttaaaaacct cggcggcgtg ggcatcgaag tccacagcgg
    12541 caactgctgc aaaaacgacc gcctcaacta cgcgcttttg gcagaacgct tcggtatgct
    12601 cgccagcgcg ggcagcgact tccaccgttt aaacaacttc agcggcggca tcctcggcgc
    12661 gtgtcccgag ctgccggaaa actgcaggcc ggtgtgggaa catttttccc ggcattgaat
    12721 gcggataaaa atg
//
LOCUS       DAWGBY010000049        12550 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.049, whole genome shotgun sequence.
ACCESSION   DAWGBY010000049 DAWGBY010000000
VERSION     DAWGBY010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12550
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.049"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(198..1049)
                     /locus_tag="WHG62_001163"
     CDS             complement(198..1049)
                     /locus_tag="WHG62_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ1725273.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPAALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1397..2911
                     /gene="katA"
                     /locus_tag="WHG62_001164"
     CDS             1397..2911
                     /gene="katA"
                     /locus_tag="WHG62_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ1725274.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            3962..4405
                     /locus_tag="WHG62_001165"
     CDS             3962..4405
                     /locus_tag="WHG62_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ1725275.1"
                     /translation="MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEAL
                     TLAEGQKTAVVEYYSNNGVFPKNNASAGVASASEIVGKYVAKVDVSGNTITSTMKTSG
                     VNKDISGATLVLEGAQKSGSFTWTCKAGSSNGVKDKFLPSSCRAK"
     gene            4819..5319
                     /locus_tag="WHG62_001166"
     CDS             4819..5319
                     /locus_tag="WHG62_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1725276.1"
                     /translation="MSNYRRDFTRGAHYFFTLALQDRTKDYLIRHIDRLRLAYRETKT
                     RYPFETAAICILPDHLHFIMRLPEGDHDYPIRIAYLKTRFSQLIPKECRAPNGSKTKK
                     REAGIWQRRFWEHLIRDEQDLNNHRDYIYFNPVKHGYAASVKEWRYSSFFKDVEKGIY
                     PLDWGG"
     gene            5783..6349
                     /locus_tag="WHG62_001167"
     CDS             5783..6349
                     /locus_tag="WHG62_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ1725277.1"
                     /translation="MGFYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGS
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMREGLSGKAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVMVAVGLAAGGALGGLF
                     GKRAEFAGGLVLIAIGTWTLLSHLGLIG"
     gene            complement(6783..8819)
                     /locus_tag="WHG62_001168"
     CDS             complement(6783..8819)
                     /locus_tag="WHG62_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ1725278.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVTDTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPKDSLAMFAAAAQSESKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDDGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLGLADLQPWDLG
                     YAGEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YDVLAQMSAHEETGVPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
     gene            complement(8907..9779)
                     /locus_tag="WHG62_001169"
     CDS             complement(8907..9779)
                     /locus_tag="WHG62_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ1725279.1"
                     /translation="MEIWNRLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            10049..12439
                     /gene="gyrB"
                     /locus_tag="WHG62_001170"
     CDS             10049..12439
                     /gene="gyrB"
                     /locus_tag="WHG62_001170"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ1725280.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLNV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDSRTIEGEELANTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
BASE COUNT         2950 a         3382 c         3475 g         2743 t
ORIGIN      
        1 cgtcattccc gcgaaagcgg gaatccaggt tcgtttagtt tcggtcattt ccgataaatt
       61 cttgcaactt tgcgtttcta gattcccact ttcgtgggaa tgacgggatg caggtttccg
      121 cgcggacgga ttcggcattc ccgctttcgc agaaatgccg gcttttggtt tgttgtcttt
      181 ataagattat tcggcaatta ttctgcggtt ttgcgtttgt gtgctgccgg aatctcaaag
      241 gattctctgt atttggcaat ggtgcggcga gaaacctcca tgccgcggaa agccagcagg
      301 ttggcgagcg cctcgtcaga atacggcgtg ggtgtggacg aggcaaaacc agcggcggga
      361 aagggattga gcgaagcaat gaggtcgagt gcggcttcga gtgtgccgct gtcggtttgg
      421 ggcaggcgtt tttttattcg cgcgagggtt tggctgcggt tgccgtcaat gctgtcgagg
      481 gcgtttcgga cgatatgcag ggcggcgggt ttggcagcac attcgcccga tctttctatc
      541 tgcagtatca gcgattcgtt caaatcggcg gcggccacgc ctgccgggtc gaattttttc
      601 aatgcggtca gggcttgttt cagcattgct tcatccaaca tccactccaa gggcgtatgg
      661 tcgaggatgt cttcgatgct gtcggtcaga taaccttgct cgtcaaggaa atcgatgagg
      721 atgtggacac aggcggattc ttggtcggaa agcgggtgtt cgcatacttg cgcgtgcagg
      781 tattgcttga aatcctgctc gccggcgatg ttggacagca tatcttcgcc ttcgtctccg
      841 ccgatttgac gggcaggcgc agtgtaatgg ctgaactcgg catcggaaaa ttcatccgtg
      901 tctttgcgtt cgagcagggg gttgtccgac agccagtttt cgacctcgcg ttcaagttcg
      961 atacccgaca tctgcaatac gcgcaaagat tgttgcagcc gctggttgag ctgctgggtc
     1021 tgtttgagct ttattccgag taaggtcatg ataatgtggg gaaaattgtt attttcagcc
     1081 tgtcggcgca aaaaatgccg caaagcgtca ttgcattata aatggtttta atgagcgggt
     1141 tcggattccg ttcgataaca aaaaacaaac gaaaatcaag aaccgattgc ttataataat
     1201 attaaatcga tttcatagtt ttaatagcga aaatcttggc gtatagtcgc atccatagtt
     1261 tttacaaaag ggaaataaaa tgtcgattca agaaatttat tgcaatcaag aaaccggtta
     1321 cgaatacgct ttccgccaaa tcgtactgta agccgtttac ccccatttga ccaacctgag
     1381 aaaaggaaca agagcgatga ctacctccaa atgccctgta acccatctga ccatgaacaa
     1441 cggcgcgcct gttgccgaca atcaaaacag cctgaccgcc ggtcctcgcg gccctctgct
     1501 ggcgcaggat ttgtggctga atgaaaaact cgccgacttc gtgcgcgaag tcatccccga
     1561 acgccgtatg cacgccaaag gttcgggcgc gttcggtacg tttaccgtaa cgcacgacat
     1621 caccaaatac acccgcgcca aaatcttcag cgaagtcggc aaaaaaaccg agatgttcgc
     1681 ccgtttcacc accgtggcag gcgaacgcgg cgcagccgat gcagaacgcg acatccgcgg
     1741 ttttgccttg aaattttata ccgaagaagg caactgggat gtggtcggca acaacacgcc
     1801 cgtgttcttc ctgcgcgacc cgcgtaagtt ccccgacctg aacaaagccg tcaaacgcga
     1861 cccgcgcacc aatatgcgct ctgccacaaa caactgggac ttctggacgc tgctgcccga
     1921 agcactgcac caagttacca tcgtgatgag cgaccgcggc atccccgccg gctaccgcca
     1981 tatgcacggc ttcggttcgc atacctacag cttctggaac gaagcaggcg agcgtttttg
     2041 ggtgaaattc catttccgca cccaacaagg cattaaaaac ctgaccaacg aagaagccgc
     2101 caaaatcatc gccgacgacc gcgaaagcca tcagcgcgac ttatacgaag ccatcgaacg
     2161 cggcgagttt ccgaaatgga cgatgtacat ccaagtcatg cctgaagcag acgcggaaaa
     2221 agtaccttat catccgtttg acttgaccaa agtttggccg aaaaaagact atccgctgat
     2281 tgaagtgggc gaattcgagt tgaaccgcaa tcccgaaaac ttcttcgccg atgtagaaca
     2341 atccgccttt gctccgagca accttgtgcc cggtatcggc gcgagccccg acaaaatgct
     2401 gcaagcgcgt ttgttcaatt acgccgacgc gcaacgctac cgcttgggcg tgaacttccg
     2461 ccaaatcccc gtcaatcgtc cgcgttgccc tgttcacagc aaccagcgcg acggacaagg
     2521 ccgagccgac ggcaactacg gcagcctgcc gcactacgaa cccaacagct tcggacaatg
     2581 gcagcagcag cccgacttcg ccgaaccgcc tttgaaaatc aacggcgacg cggcacactg
     2641 ggactaccgc caagatgatg acgactactt cagccaaccg cgcgccctgt tcaacctgat
     2701 gaacgacgcg cagaaacagg cattgttcgg caacaccgcc gccgcaatgg gcgacgcgcc
     2761 cgacttcatc aaataccgcc atatccgcaa ctgctaccgt tgcgatccgg catacggtga
     2821 aggcgtggca aaagccctcg gactgactgt cgaagacgca caagccgccc gcgcgaccga
     2881 ccccgcactc ggccagcccg gtttgctgta agggggcatt atgtggatgg aaattgaaga
     2941 aatcctgtcc cgcgccgtcc gctaccggaa ataaccgggc ataaaaatgc cgtctgaaac
     3001 attgtccgac cgtttcagac ggcattcccc catcccgccc cgccgtttca gcgggcgttt
     3061 tttattaaac gcaaaatatc ccgtcattcc cacgcaggcg ggaatctaga acgtaaaatc
     3121 taaagaaacc tttttcccca taagtttccg caccgacaga cctggattcc cgcctgcgcg
     3181 ggaatgacgg tttaggtatt tctgacgatt cagtaagccg tatcggactg tagaatgggc
     3241 tgtaaggtgg gcgtagggtg ggcttcagcc caccaactcc accaatccca ccaacccact
     3301 tttccgcgtc attcccacga aagtgggaat ctagaacgta aaatctaaag aaaccttttt
     3361 ccccgataag tttccgtgcc gacaggtctg gattcccacc tgcgcgggaa tgacggttta
     3421 ggtattcaca taaggcggat atgtaaggta gatgcatagg acgggcgata gggtggacgt
     3481 agggtgggct tcagcccacc aatcccacca ttccaccaac tccgccaatc ttaccggtgc
     3541 cggcaaaccg atgccgtctg aaggcggcgg aatcggcgga ggcggtgggc tgaagcccac
     3601 cctacagcca ccccccccca aaaaaaaaaa ccaaaaaaaa acccaatctg acaaaatctg
     3661 acaaaaaatg tcagccggaa actgacaaaa attgtcacaa ctgacaaaaa acgtcagccc
     3721 gccgcattat tccgccgcag gccgcgccgc gttgatataa aaaaatacca ataccaaaca
     3781 gacaaataaa aaaatattct gtaaaatgcc gagctgaacc ccgttttggc acgccgcttg
     3841 ctggaaagaa ggcgaaccga aacaaaaaag accacggtca aatacattac gggtttacgt
     3901 ttgcggcgga tgccgcaaat ttccaatcaa acttaaacat tttcaaacag gagtcatcca
     3961 aatgaaagca atccaaaaag gtttcactct gatcgagctg atgatcgtca tcgccatcgt
     4021 cggtatcttg gcagccgtcg ccctgcccgc ataccaagac tacaccgcgc gtgcccaaat
     4081 gtccgaagcc ctgactttgg cggaaggtca aaaaaccgca gtggtcgagt attattccaa
     4141 caacggcgtg ttcccgaaaa acaatgcttc tgcgggtgtt gccagtgctt ctgagattgt
     4201 aggtaagtat gtggctaagg tagacgtttc gggtaatacc attacgtcta caatgaaaac
     4261 ttccggtgta aacaaagata tcagcggagc aacccttgta ctggaaggcg cgcaaaaatc
     4321 tggctcgttc acgtggactt gtaaagcggg ttcttcaaat ggtgtgaaag acaaattcct
     4381 gccgtcttcc tgccgcgcca aataaggaca atgaccgggt ctgacccggc cgtgaaaaca
     4441 aatgccgccc gaaccgctcg ggcggcattt tctattcccc tttgccgctg tagggtgggc
     4501 ttcagcccac cattccacca atcccaccaa ctccaccaca tcaaggattt ttggtgaacc
     4561 gttgggattc ggcgggtttc gggtttcggc ggggattggc ggaatggttg gtttgggttg
     4621 ggtgggaatg gttggattgg cggaatggtg ggctgaagcc caccctacga aacaccctac
     4681 gaaacaccct acagcctaca catcagccct acgccctccc tacccatttc cctgcaaatc
     4741 ccctaaaaat cctcccgcac gccctgaaaa caaggaataa tacaggtttc cgcccatcgg
     4801 gctaaaaagg ggataaatat gtcaaattac cggagggact tcacgcgcgg ggcgcactat
     4861 tttttcacat tggctttgca agacaggacg aaggattacc tgatacggca tatcgacagg
     4921 ctgcgcctcg cctatcgtga aacgaaaaca cgttatccgt ttgaaacggc ggcaatttgt
     4981 attttgccgg atcacctgca tttcattatg cggctgccgg aaggcgacca cgattacccg
     5041 atacggattg catatttgaa aacccggttt tcccaactca tccccaaaga gtgccgcgcc
     5101 cccaacggga gtaaaacaaa aaaacgcgaa gccggcattt ggcagcgcag gttttgggaa
     5161 cacctgatcc gggacgaaca agatttaaac aaccaccggg attatattta tttcaacccc
     5221 gtgaaacacg ggtatgcggc gagtgtgaag gaatggcgtt attcttcctt cttcaaagac
     5281 gttgaaaaag gcatttaccc tttggattgg ggagggtaaa gctcccgccg ccgccaaaat
     5341 ccgcaggacg gacgcggggc agatgagtcg ggcgggacgt agggtgaggc gtaggtgcgt
     5401 agggtggatg tgtagggtgg gcttcagccc accaatccaa ccacctccgc caatccaacc
     5461 attcccacca acccaaacca accattccgc caatccccgc caaaaaccga aaccgccgaa
     5521 tcccgacggt ttgccaaaaa cccttgatgc ggtggaattg gcgggattgg atgagttggt
     5581 ttggcagaat tggtgggctg aagcccaccc tacagcccac cctacaaccc gccctaagtc
     5641 ccacctacgt tccatccgac gcatccgccc tacggttccg gattcccctg cgaaccgccc
     5701 cgcgcacgaa aactgcttta cgcggcgttt ttcgcgtttt gctgttttgc tataatccgc
     5761 cctttttaag gacgggtgcg gtatgggttt ttatgctttg ctcttgattg cgctggggat
     5821 gtcgatggat gcgtttgccg tcgcgctggc aaagggtgcg gcggtcagga tgcccccgcg
     5881 caaaattgca gcaacggctt tggtgttcgg ctcggttgag gcactcacgc cgctggcagg
     5941 ctgggtaggc ggtttttatg ccaaaccgtt tatcagcgaa tgggaccatt gggcggcttt
     6001 cgtcctgctg ggcgggctgg gtctgaaaat gatgcgcgaa gggctgtccg gcaaggcgga
     6061 agatgtgcgc gaaagcaaac gggaaagcct atggatgacg gttttgactg cttttggaac
     6121 cagtattgat tccatgatag tcggggtggg cttggcgttt atggaggtaa acatcgcctt
     6181 tgccgccgca atcatcggta tggcgacgac ggtgatggtg gcggtcgggc tggcggcggg
     6241 cggggcgttg ggcgggctgt ttgggaaacg tgcggagttt gccggcgggc tggtgctgat
     6301 cgccatcggc acttggacac tcttgtcgca cttggggctg atcgggtaag gactgccaaa
     6361 aaatgctgtc tgaagcgttg tttgaccgtt tcagacggca ttttttattt tttgggcgta
     6421 gggcgaatcc gtaaggtggg atgtaaggtg ggatgtaggg tgggcttcag cccaccaatc
     6481 ccaccacctc cgccgctccc gccaaatccg ccattcctcg ccgaaaaccg aaaccgccga
     6541 atcccgacgg tttgccaaaa acccttgatg cggtgggaat ggtgggaacg gtgggattgg
     6601 cggaggagat gggattggtg ggctgaagcc caccctacgc ccactgtttt tgattttttg
     6661 tttttgcgag aatggcggga ttttggtttg ctgtttttgt gaaaatgacg aaaccgcgca
     6721 aatgctgatg ccgtctgaaa cactgtttga ttgtttcaga cggcattttt tgttcacatc
     6781 gatcaagccg cgttgtcgaa gccgctgtgg cgcaagagtg cgtctatgct cggttcgcgt
     6841 ccgcggaagg ctttgaagga ttctgccgcg ctgcgcgatc cgccgacggc gaggatttcc
     6901 tgccaaaagc gtttgcctgt ggcggcgaca tcgtcgcttt cttcaaaggc ggcgtatgcg
     6961 tccgcgctca atacttccgc ccacgcgtag ctgtaatagc ctgcggaata gccgcctgcg
     7021 aagatgtggc cgaagctgtt ggcgaagcgg ttgtattcgg gcggtcggac gacggcgact
     7081 tctttgcgca cgctgtctaa aacctgttgc cagtttttca gacggccttc gtcgtcttcg
     7141 ctgtaaatca tcatatcaaa gagggcgaac tccatttggc ggacgaggaa cattccgcgt
     7201 tggaagtttt tggcggcgag cattttgtcg aagagttctt tcggcagggg aacgccggtt
     7261 tcttcgtggg cggacatttg tgccaagacg tcgtattccc agacgaaatt ttccataaac
     7321 tggctgggca gttcgaccgc gtcccattct acgccgttga tgccggatac gcccagttcg
     7381 tccacttggg taagcaggtg gtgcagcccg tgtccggttt cgtggaagag gatgaggatt
     7441 tcgtcgtggc tcaaacgcgc ttctctgccg ccgacgggcg gggcgaagtt gcagacgagg
     7501 taggcggtgg gcagttgcag cgtgccgtct gaaaaacggc ggcgaccttt gtagtcgttc
     7561 atccacgcgc cgccgcgttt gccttcgcgt gcgtacaaat ccatataaac gccgcctatg
     7621 gtttcgccgt tttgttgcaa ttcaaaatag cgcacgtctt tgtgccagac ggggacggtt
     7681 ttttcggtaa atccgatgcc gtagagtttt ttgatttggg cgaacagtcc gtttaatact
     7741 ttgccgacgg ggaagtattt tttgacttcg gtttcgctga atgcgtattt ggcttcgcgc
     7801 agtttttcgc cggcgtagcc caagtcccac ggttgcaaat cggcgagacc gaggctttcg
     7861 cgggcgaagg ctttgacttc ggcgaggtct ttttcggcgt agggtttggc gcggcgggcg
     7921 aggtcgtgca ggaagtttaa aacttgttcg ggcgtgtccg ccattttggt tgccagcgac
     7981 aattcggcgt agtttttgaa gccgagcagt ttggcggttt gcagggcgtt tgcgagcgtg
     8041 cggtcgatgt tggcggtgtt gtcgaatttg ccgtcgtctg acagttcgct ggcgcgggta
     8101 acgtaggcgc ggtagatttg ttcgcgcagt tcgcggttgt cggcgtattg gatgacggcg
     8161 aggtagtgcg gaatctgcaa gccgattttg tagcctgttt tgctttcgct ttgcgcggcg
     8221 gcggcaaaca tggcgagcga gtctttggga atgccggcaa gcggtgcggc atcgtcaaag
     8281 taaatgccga acgcgtcggt cgcgtctagg acgttttggg agaatttggc ggaaagttgc
     8341 gcgccttcgg tttgcagttt tgccagttct gcctgctgtt cgggcggcag ttccgcgccg
     8401 ctaaggacga aatcgcgcag gtcgtggttg agcttggttt tttgtgcggg ggagagggtg
     8461 tcgaattcgg gggaattttt gatggttttg aagcggttgt acagctcgat gtcttgtccg
     8521 atttcggtga agaagacggt gatttcgggc atcagttcgt tatagacggc gcgcagttcg
     8581 ggcgtatcgg tgacggagtt gaggtgcgac accacgcccc aaatcctgcc gacgcgttcg
     8641 gtgatgccgg tcaggggttc gacagtgttt gcccagccgg tgtgcgtttg ggctttgatg
     8701 gcggcgattt gttcgcgcgc ttcggcgatg gcggtttgca gggcgggttt gatgtcttcg
     8761 gttttgattt gatcaaaacg gggttcttcg cccaaatgga gcagtgcgtt gtcagtcata
     8821 agatgggttt cctttgcgtg ttgtgcttca gacagcatat cggcaatatg ccgtctgaag
     8881 ccggaaatgg ggtcggtcgg ggaaagttaa agtgtttcgg agccggcggg gtaatttaac
     8941 aggcggtatt gtacgcgcaa aaattcgtcc ataaccgcct gttggatttc cagccgcttt
     9001 gaaacggggg aggcgaagcg gacgatgatg cggtatgcct tgtcatcgta cggcacgcgg
     9061 gtaacgcgcg gtctggcggc gggcgtgata aacagttttt ccgcctgcac gttttccaaa
     9121 tgccgttgga tggcggggat gtagggcgcg cacaagggct cgagtacggc tttcagacgg
     9181 catacggctt catccgaatc caaatggatg gggacgggga tttcgaccgt atggatgaca
     9241 tagtcgccca aaatattgtc gcggcgcacg gggtggctca acaacaggct gttggggaaa
     9301 gaaacggtgg ttcccgcaag ctgtccgacc aaggggttcg gaccgacctg catcatcagc
     9361 gtgttcaaca ggttgatgtc gaccacgcgc ccgcgcaggc cgttgatttc gatatagtcg
     9421 ccgaccgagt attgctgggt ggcagacctt aaaatactgc ccgacagaca cataatcagt
     9481 tccttcgtcg ccacgacgac cgccgccgcc accgcaaaca tcgacaaagc cagcgtttgg
     9541 atttgcgccg accagataaa tgccagcgaa aacagcacca aaagcagcgt tatattgcgg
     9601 ctggcaacca aaaaccgccg cttgctttcg atgccgaaat ccggatgccg tttgaagtgg
     9661 atattcaaca gaagggcgcg cgccagcagc aaagccgcaa ccgccgccac ggattcgacc
     9721 gcctccgcac gtatcgggac ggcaccgagc caagtgtcca acctattcca tatttccatt
     9781 tccgcgcccc tgtccgaaaa gtatagggtg tagattttag tggcaaaaaa acgcttttgc
     9841 cactttacgg gaaaatcccc gacctgatgc cggaggcaaa cgtaccgttt catcttttcc
     9901 cggcggcaca ctgatgcgga taacgctgaa ttaggcggca aaatcggcta taatacacaa
     9961 ttatatatgc cgtcccgccc gctttttcca caaggtgcgg acttgttttg gcggcatcgc
    10021 aaaatctttt caaaatccgg caaaaaatat gactgaacaa aaacacgaag aatacggcgc
    10081 cgacagcatt caggtgctcg aaggcttgga agcggtacgc aaacgccccg gcatgtacat
    10141 cggcgacacg caggacggca gcggcctgca ccatatggtg ttcgaagtat tggacaacgc
    10201 cattgacgaa gcactcgccg gacattgcga caaaatcacg gtaacgatac acgccgacca
    10261 ttccgtcagc gtcgccgaca acgggcgcgg tatgcccacc ggcatccacc cgaaagaagg
    10321 acgctccgcc gccgaagtca tcatgaccgt attgcacgcg ggcggtaaat tcgacaacaa
    10381 cagctacaaa atctccggcg gcctgcacgg cgtgggcgtg tccgtcgtca acgcgctgtc
    10441 cgactgggta acgctgacca tctaccgcga cggcaaagaa cacttcgtcc gcttcgtgcg
    10501 cggcgaaacc gaagagccgc tgaacgttgt cggcgattcc gataaaaaag gcacgaccgt
    10561 gcgcttcctc gccagtacgg aaaccttcgg caacgtcgaa tacagcttcg acatccttgc
    10621 caaacgcatc cgcgaacttt cgttcctgaa caacggcgtg gacatcgaat tgaccgacga
    10681 gcgcgacggc aaacacgaaa gcttcgccct ttccggcggc gtggctggat tcgtgcaata
    10741 catgaaccgc aaaaaaacgc ccttgcacga aaaaatcttc tacgcgttcg gcgagaaaga
    10801 cggcatgagc gtcgaatgcg caatgcaatg gaacgacagc tatcaggaaa gcgtgcagtg
    10861 cttcaccaac aacatccctc agcgcgacgg cggtacgcac ctgaccgcgt tgcgccaagt
    10921 gatgacgcgc accatcaaca gctacatcga agccaacgaa gtcgccaaaa aagccaaagt
    10981 ggaaaccgcc ggcgacgata tgcgcgaagg tttgacctgc gtgttgtccg tcaaactgcc
    11041 cgaccccaaa ttttcgtccc aaaccaaaga caaactggtt tccggcgaaa tcggtcccgt
    11101 cgtcaacgaa gtcatcagcc aagccctgac cgacttcctc gaagaaaacc ctgccgaagc
    11161 caaaatcatc accggcaaaa tcgtcgatgc cgcccgcgcg cgcgaagccg cccgcaaagc
    11221 ccgcgaaatc acccgccgca aaggcgtgat ggacggtttg ggcctgccgg gcaaactcgc
    11281 cgactgccaa gaaaaagacc ccgcattgtc agaactttat ctggtcgagg gcgattctgc
    11341 aggcggttcc gccatgcagg ggcgcgaccg caaattccaa gcgattttgc cgcttaaggg
    11401 caagattttg aacgttgaaa aggcgcgctt tgaaaaaatg ctcgccagtc aggaagtagc
    11461 cgctttgatt accgcgttgg gcgcgggcat cggcaaggaa gaattcaatg ccgagaagct
    11521 gcgttaccac cgcatcatta tcatgaccga tgccgacgtg gacggcgcgc acatccgcac
    11581 cctacttttg accttcttct accgccaaat gcccgaactg gtcgagcgcg gctacatcta
    11641 tatcgcccag ccgcctttgt ataaagcgaa atacggcaaa caggagcgtt acctcaaaga
    11701 cgaactggaa aaagaccaat ggctgctcgg tttagccttg gaaaaagcca aaatcgtttc
    11761 agacagccgc accatcgaag gcgaagagct tgccaatacc gccaaacaat tcctgttggc
    11821 caaaaccgtc atcgaacagg aaagccgctt cgtagacgaa ctcgtcctgc gcgccatgct
    11881 acacgcgtcg cccattgatt tgacgtcgtc tgaaaacgcc gataaagccg ttgccgaact
    11941 ttccggtctg cttgacgaaa aagaagtcgc cctcgaacgc atcgaaggtc atgaaggaca
    12001 ccgattcatc aaaatcacgc gcaagctgca cggcaacgtc atggtcagct acatcgaacc
    12061 caagttcctc aacagcaaag cctaccaaac cctcacccaa accgccgccg cgctcaaagg
    12121 catggtcggc gagggtgcca agctttacaa aggcgaaaac gggtacgacg cggacagctt
    12181 tgaaaccgct ttggacatct tgatgagcgt tgcccaaaaa ggtatgtcca tccaacgata
    12241 caaaggcttg ggcgagatga accccgaaca gctgtgggaa accacgatgg atcccgccgt
    12301 gcgccgcctg ttgaaagtgc gcatcgaaga cgccatcgcc gccgacgaag tgttcgttac
    12361 gctgatgggc gacgaggtcg agccgcgccg tgcctttatc gaaaacaacg cgctgattgc
    12421 ccaaaatatc gacgcataag tgccgtttta aaaaaggaga cgggcatcgt gccgcgtctc
    12481 cttttggttt gtcaaacgga agccatgccg tctgaaaccg cctttcggag caaaaccatg
    12541 atcagcattt
//
LOCUS       DAWGBY010000050        12462 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.050, whole genome shotgun sequence.
ACCESSION   DAWGBY010000050 DAWGBY010000000
VERSION     DAWGBY010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12462
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.050"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(71..487)
                     /locus_tag="WHG62_001171"
     CDS             complement(71..487)
                     /locus_tag="WHG62_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725281.1"
                     /translation="MSGEKSENLPADEQQKMLQEFLELQKQDIAVKQKELESRKDEIQ
                     SHERIALATIEAQKQGEQQHGEIFKEVHKRRLNAVIAISFLIAAVLITALWRDKDSVA
                     IEIVKIGGAVALGYFAGINRGKAQTLEKQRREKDSD"
     gene            complement(484..675)
                     /locus_tag="WHG62_001172"
     CDS             complement(484..675)
                     /locus_tag="WHG62_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725282.1"
                     /translation="MNTVKEYTAVRERLLNAADYLEEVRKDRKTGNIASVEFVPPKIG
                     ARGYGKFKVRYKTLVAVDL"
     gene            complement(719..961)
                     /locus_tag="WHG62_001173"
     CDS             complement(719..961)
                     /locus_tag="WHG62_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725283.1"
                     /translation="MDTLKVNPFLNKIKEKCRLKTARMLFQTAFFVVGHQCPAICAAL
                     RLSRYGILVCIFRRNLPYIVLKYYTVVLYGFDFLEK"
     gene            1198..1365
                     /locus_tag="WHG62_001174"
     CDS             1198..1365
                     /locus_tag="WHG62_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725284.1"
                     /translation="MVDEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNIDFSQW
                     VKSIIKEKIKK"
     gene            1638..1823
                     /locus_tag="WHG62_001175"
     CDS             1638..1823
                     /locus_tag="WHG62_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725285.1"
                     /translation="MPDEKTLKAKQAEYQRKYDQKRLMKTVSFHLEREKELVDFMQKE
                     IPDFSNWVKSVMKEKMK"
     gene            2024..2224
                     /locus_tag="WHG62_001176"
     CDS             2024..2224
                     /locus_tag="WHG62_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725286.1"
                     /translation="MDSIKKAQEKYALKRVVKTVSFNSEKELDLIKFSENLDFSNWVK
                     SKIRGDMESEKFKKKAKKNIDK"
     gene            2356..2964
                     /locus_tag="WHG62_001177"
     CDS             2356..2964
                     /locus_tag="WHG62_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HEZ1725287.1"
                     /translation="MKDNFTMNTQLIPTVSGQLDNQTQALVDAHDLHKFLGVETPFSK
                     WIQRRIEEYGFTQALDFIGVDKIVRTEAGFFGQRDKTVQGYYLSLDMAKELCMVERND
                     KGRQARRYFIEMEKQAKALPDAVLYRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIG
                     KLLDMNPGAVSYRLKKLNDLGFLEYVPKPKMVVQQQSLGLEG"
     gene            2968..3183
                     /locus_tag="WHG62_001178"
     CDS             2968..3183
                     /locus_tag="WHG62_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725288.1"
                     /translation="MNTTYTLTFDQDSLKALNLLVFTLNHLKVLEMDMEGIEDGLSAV
                     IETASEKADKLSAAFYNAVYEQEEKAA"
     gene            complement(3344..3862)
                     /locus_tag="WHG62_001179"
     CDS             complement(3344..3862)
                     /locus_tag="WHG62_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HEZ1725289.1"
                     /translation="MAKTRIKQPAIEAAQDKTEVTAFIRQIGDLQREVKRLETEAGDK
                     KAAIEEEYAAQAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDAILNQKERFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
     gene            complement(3972..4139)
                     /locus_tag="WHG62_001180"
     CDS             complement(3972..4139)
                     /locus_tag="WHG62_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725290.1"
                     /translation="MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGMWKTAEAET
                     LAQAITLWEEV"
     gene            complement(4132..4305)
                     /locus_tag="WHG62_001181"
     CDS             complement(4132..4305)
                     /locus_tag="WHG62_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725291.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATKFMVKRNREQEVAEYQAQFEDKD
                     GKGRLKTEGNNDE"
     gene            complement(4414..4680)
                     /locus_tag="WHG62_001182"
     CDS             complement(4414..4680)
                     /locus_tag="WHG62_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725292.1"
                     /translation="MQVLKKVDWKMFVARSFWRWVPVGLTVGVWCFVAGMALHSCAKE
                     PEPVAKEPTKVEAMERQADLEVKVWEGQYESMSVEEKMKGIVYE"
     gene            complement(4770..5684)
                     /locus_tag="WHG62_001183"
     CDS             complement(4770..5684)
                     /locus_tag="WHG62_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEZ1725293.1"
                     /translation="MKQINQALQQKLVEFKEKSGMNQTQLARGIDTSPASISMYLNGT
                     YADKGGNYETIETKIEAFLEMEDSKARREELVLGFVSTKTTRRIAEVMRDAHEGGETV
                     VIYGQAGLGKTQSVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGRLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKHG
                     ELVQLYSRVSVALNLGESLPDDELFEIAKAALPDADEETLLELVKHSNGNTRRMSKLM
                     RGAVRTANKNGIKMQAGIVKKYSSLIIR"
     gene            complement(5720..7696)
                     /locus_tag="WHG62_001184"
     CDS             complement(5720..7696)
                     /locus_tag="WHG62_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1725294.1"
                     /translation="MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPIEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     DARCAVVAAVLGIKYQYGCSAKAAVAQFLGLLAESKLDAVTLGNLEKANDRSRTAKVG
                     ERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGI
                     IERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPGWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYSPKAYREMRLEQDGIAPDMLSA
                     EELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKDEVRVSYDLDDASAVNVFDMD
                     GKFITKAQADGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQAAVW
                     DELGHLGGNVIEAEYAVLPRTGTDDFVLFETDRS"
     gene            complement(7698..7949)
                     /locus_tag="WHG62_001185"
     CDS             complement(7698..7949)
                     /locus_tag="WHG62_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1725295.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            8182..8895
                     /locus_tag="WHG62_001186"
     CDS             8182..8895
                     /locus_tag="WHG62_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HEZ1725296.1"
                     /translation="MRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNAVSDD
                     LNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGKEHIT
                     LEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDKAETY
                     LRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFAVESLTEL
                     SNDDLQKTYAAVSTKKRKK"
     gene            9062..9274
                     /locus_tag="WHG62_001187"
     CDS             9062..9274
                     /locus_tag="WHG62_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1725297.1"
                     /translation="MNHAETEPRDGLYVLRIGNDLFVKRVQRIPGKLLVTSENPRYAP
                     FEIDLSNTQDDIAIIGRVEWYGRSID"
     gene            9496..10074
                     /locus_tag="WHG62_001188"
     CDS             9496..10074
                     /locus_tag="WHG62_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ1725298.1"
                     /translation="MFRHNGEILLSGINIKLKSGDSLLIRGPSGCGKTSLLRALAGLW
                     PFGSSGKVSHPPHQDILFLPQRPYTAQGSLRDAICYPAIDKQHPELIEAMNTCRLGYL
                     VDKLDKTDDWQHKLSPGELQRVAFVRALLSQPKIVLLDEATAALDEPAEAALYRALKQ
                     KLPDSIIISIGHRSTLNAFHNMRLDVGNVACG"
     gene            10179..10847
                     /gene="hda"
                     /locus_tag="WHG62_001189"
     CDS             10179..10847
                     /gene="hda"
                     /locus_tag="WHG62_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ1725299.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            10844..11512
                     /locus_tag="WHG62_001190"
     CDS             10844..11512
                     /locus_tag="WHG62_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ1725300.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLETGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLQSYGKTYFYSDSKNDLPLLRLVSEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
BASE COUNT         3364 a         3295 c         2510 g         3293 t
ORIGIN      
        1 aaaaatgccg tctgaaaacg agctttgcga gtttcgccaa aacgtttcag acgacctttt
       61 ttactacaat ctaatcactg tctttttcgc gccgttgctt ttccaaggtt tgcgctttac
      121 ctctgttgat tcctgcaaaa tatcccaaag ctaccgcccc gccgattttg acaatttcaa
      181 tagcgacgct gtccttatcg cgccataacg cagtaatcag cacggcggca atcagaaaag
      241 aaatagcaat cacggcattc agacggcgtt tgtgtacctc tttgaaaatc tcaccatgtt
      301 gctgttcacc ctgtttttgc gcttcgatgg tagccagtgc aatgcgttcg tgagattgga
      361 tttcgtcctt acggctttcc aactccttct gtttgactgc aatatcctgt ttttgaagtt
      421 ctaaaaactc ctgaagcatt ttctgctgct catcggccgg cagattctcg gatttttccc
      481 cgctcataaa tcaaccgcca ctaaggtttt gtaacggact ttgaatttgc cgtaaccccg
      541 agcccctatt ttcggcggca caaattccac ggacgcaata ttgcccgtct tacggtcttt
      601 acggacttct tccaaataat cggcagcatt gagcagccgt tcgcggactg ccgtatattc
      661 tttgacggta ttcatttttc aacctcgccc aaatagtgca aatattagca tatgggattt
      721 atttttcaag aaaatcaaat ccatataaaa caaccgtata atattttaat actatatatg
      781 gtaaatttct tctaaaaata cacactaaaa taccatatct tgataaccgc aacgccgcac
      841 aaatggcagg gcattgatgc ccgacaacaa aaaatgccgt ctgaaacagc attcgagctg
      901 ttttcagacg gcatttttct ttgattttgt tgaggaaagg gttgactttt aacgtgtcca
      961 cgtttataat tcaattcatc ggcgtagtga gggccgatac gggaaaagcc ccaccgaagc
     1021 ggggctcaac tgggagaaag aagatgaata aacgcactat tcaaattctc atcttggtcg
     1081 cagttttcat gttggcaagt gctaatgcct actaaagact gaccagctgg gggcggtcgc
     1141 cgctgtcccc agtcccaatc ttacaaaata cggtttaaaa aatcaaggag tttgcctatg
     1201 gttgatgaaa aactggcaga aaaccgaaag cgttacgagc agaaacgggt gattaagaaa
     1261 gtctcgttca atgccgaaac ggaaaaagaa cttttggaat atgcccaaaa tatcgatttt
     1321 tcccaatggg ttaaatcaat catcaaagaa aaaatcaaaa aatagcttga ctaaattcta
     1381 gaaatactag ataatacgcc tatctgataa agcaaagccc cgaagcggca acttcggggg
     1441 cttatcggat agaaaggagg cttgtggaaa tgacaaaact ggcgaaagtt gtttttttca
     1501 tcattctgct tttaagctgt agtccggctt actaagcaag ttgattaaac acaaggggtg
     1561 gcagaacacc gcgccccttt cgccaacctt tctgcaagcc attttactac aacgatttta
     1621 aaaatcaagg attgcctatg cctgatgaaa aaacgctaaa agcaaaacaa gctgaatatc
     1681 agcgaaagta tgaccaaaag cggctgatga aaacagtttc tttccatttg gaaagagaga
     1741 aagagttggt ggattttatg caaaaagaaa ttcccgactt ttcaaactgg gttaaatcag
     1801 tcatgaagga aaaaatgaaa taagaaaatt ccgccgatgg gaaaacatcg gcggaacagg
     1861 tggaaagcag agcagcaact ctctttatgt agggcatgaa aaaaggccgt ctgaaacagg
     1921 ttttaaaccc catttcagac ggctttttgt tgtaatacat cttgattaaa atggttttta
     1981 gtattaccat aatcgtgttt taaaacctat ttaaaggaag attatggact cgattaaaaa
     2041 ggctcaagaa aaatacgcac tcaagcgagt agtgaaaaca gtatcgttca attccgaaaa
     2101 agaacttgat ttaattaaat tttctgaaaa tttagatttt tcaaactggg taaaatcgaa
     2161 aattagagga gatatggaat cggaaaaatt caaaaaaaaa gcaaaaaaga atattgacaa
     2221 atagaattac cataatttaa aatttccata tcttgtgcaa cacaagatat ggaaatcccc
     2281 gataagtgac agcttatcgg ggatagtgga aaagcaacgt tagagcgttc ttttccttgt
     2341 catctcaacc ttgaaatgaa agataatttt accatgaata cccaactcat cccaactgtt
     2401 tcaggtcaat tggacaatca aacacaagca ctggttgatg ctcatgacct gcataagttc
     2461 ttaggtgtgg aaacaccatt ttctaaatgg attcagcgtc gcattgaaga atacggattt
     2521 acacaagccc ttgattttat cggcgtggac aaaattgtcc gcaccgaagc aggtttcttt
     2581 ggacagcgtg ataaaactgt tcaggggtat tatttatccc tcgacatggc aaaagagctg
     2641 tgcatggtgg agcgcaacga caaaggacgc caagcccgcc gatattttat cgaaatggag
     2701 aaacaggcaa aagccctgcc tgatgccgtg ctataccgca tcgatgcatt ggaagacgcc
     2761 tatttccaag ccgcgcccga aatgctcgcg ctgctgcgct accgcagtat gggcttgaac
     2821 ctgaccgaaa taggcaaact cttggacatg aaccccggcg cggtttccta ccgtctcaaa
     2881 aaactcaacg atttgggttt cttggaatat gtccccaagc ccaaaatggt ggtgcaacaa
     2941 cagtctttgg gattggaggg ttaagccatg aataccacct ataccctgac tttcgaccaa
     3001 gacagcctca aagccctgaa tctgctggtg ttcacactca accatctgaa agttttggag
     3061 atggacatgg aaggaatcga agacggtttg tctgccgtga ttgaaaccgc ctccgagaaa
     3121 gccgacaagc tgtccgccgc tttctacaac gccgtgtacg agcaggaaga gaaagcagcc
     3181 tgaatctagg gcatgaaaaa aggccgtctg aaacaggttt taaaccccgt ttcagacgac
     3241 ctttaaatca tgggttaaag cctatttgaa ccggctaggc aagctcctgc tccgtaggct
     3301 caatcacgtt tcaacacact gaattgaaat caggctgttg attttataga atttgttcgc
     3361 tcggctcaat cacaaaatcc tccacgccgc tcacaatctt aatccccggc acttggccgt
     3421 ctgaaaaacg ctctttttga ttcaggatgg cgtctttgtc gatttccttt ttagtgcgga
     3481 caaactcggc aaaggcggat ttttccgaga gccacgccaa gacggcggcc acgcccgtta
     3541 ccttgacgga tggcggacgg atgcgccatt taatcaggcc ggtagtaaag tccacggttt
     3601 tggttttacc gttttccgtc agctcgtcct tatgtgcctc gcagtatgcg gccacacgtt
     3661 cggtcaggct catgatttcg gcacacatcg gcgcggcttg ggcggcatat tcttcttcga
     3721 tggccgcttt tttgtctccg gcttcggttt ccaggcgttt gacttcgcgc tgcaagtcgc
     3781 cgatttggcg gataaatgca gtaacttccg ttttgtcttg tgccgcttcg atggcgggct
     3841 gtttgattcg ggttttagcc attttctctt cctttcaggt tgggtttaac atttcggctt
     3901 actcaagcct tgttcgcgtt cgtgcttggc aagtgcttca actttcgcgc ggtttctcaa
     3961 aaacttaaac atcacacttc ctcccataaa gttatcgcct gagccaaagt ttccgcctcg
     4021 gcagtcttcc acatcccgtc cggcgcacgc gctgcaatca caaagccttc gccgtccttc
     4081 ttcatgacca tcagctcgcc acggtcttcg agccattcga ttaaatcttt ttcattcatc
     4141 gttgtttcct tccgttttca gacgaccttt gccgtcctta tcttcaaact gcgcctgata
     4201 ttcggcgact tcctgctcgc ggtttcgctt caccataaac ttcgtcgcac gcctgcggtg
     4261 ttgtccccaa gcctgccaat ccgtattacg tcgtccgaaa ctcatttcac acatcctttc
     4321 acaatcgcct tatcgccata tttcgcgcgg atttccttta ccgcccgtgc caaagcctct
     4381 tttttcgccg cagggctcaa taaaattggc ttatcactca taaacaatcc ctttcatttt
     4441 ttcctcgacg ctcattgact cgtattgccc ttcccatacc ttgacctcca aatccgcctg
     4501 tctttccatc gcctcaacct tcgtcggctc tttcgcaacc ggttcgggtt ctttcgcgca
     4561 ggaatgcaac gccattcccg ccacaaaaca ccacacgccc accgtcaaac caaccggcac
     4621 ccaacgccaa aaagagcgcg ccacaaacat cttccaatca actttcttca aaacttgcat
     4681 tttgcgtttt ccttttaaaa caacaactta ttaaaatcat agggtaaaaa aatatatagc
     4741 cctgtcagag acttaccgtt tcagacggcc tatcggataa tcagggagct gtatttctta
     4801 acgataccgg cctgcatctt gataccgttc ttgttcgccg tgcgtaccgc gccgcgcatc
     4861 aatttactca tccggcgcgt attgccgtta ctatgtttaa ccagttccaa gagcgtttct
     4921 tcgtccgcat caggcaaagc cgctttcgca atctcaaaga gttcgtcatc cggcaaagat
     4981 tcgcccaaat tcagcgcaac agacacgcgg ctataaagtt gcaccagctc gccatgctta
     5041 ccgcgcaaat tcgcaaccag tcggggcata ccgctcaaca ccaaaccgca gcccgtttca
     5101 tcatgcagtc ggcggataat ctcaagggcg cgcaagggca ggttttccgc ttcatcgacc
     5161 acaatcagac ggcccgaatc gcgcaggcgg tcagatacag actcaaacaa atcattcagg
     5221 ctgcccatcg ccgatacctt cgccgccgtc gccaacttgc gcatcagtac caaagccgta
     5281 aagctcggat tagcctcaat caagatagcc gcagggtttt tctcgcagta gtttttgacc
     5341 gactgcgtct tgcccaaacc cgcctgaccg tagatcacca ccgtttcgcc gccttcgtgc
     5401 gcatcgcgca tcacttccgc gattcggcgt gtcgtcttag tcgatacaaa tcccaacacc
     5461 agctcttcac gtcgcgcctt actgtcctcc atctccaaaa acgcctcgat tttcgtctcg
     5521 atggtttcat aattgccgcc tttatcggca taagtgccgt tcagatacat actgatggag
     5581 gccggcgaag tatcgatacc gcgtgccagt tgggtttggt tcattcccga tttttcttta
     5641 aattcaacca gtttttgttg caatgcttga ttaatttgtt tcattttttt agtcctttta
     5701 aaagaggttt aaaaccgttt taacttctat ccgtctcaaa tagcacaaaa tcgtccgtgc
     5761 ccgttctcgg caataccgca tactccgcct cgatgacgtt tccgcccaaa tgtcccagct
     5821 cgtcccaaac cgcagcctgt tccagtgccg gattgacttc cgcgtttgca agcttgattg
     5881 cattttccgc ccgcttgatt ttgccttttc ggcgtttttc cgccagttgg tcgatacgag
     5941 ccgtcgggaa agcctcgcgg gtattgccgt cggcctgagc cttagtgata aacttgccgt
     6001 ccatatcaaa cacattgacc gccgaagcat cgtccaaatc gtagctgacc cgtacctcgt
     6061 ccttgtgata ctccgccagc tcggttgaga aataagagtt gttgaacaaa tccagccaac
     6121 cgcgctgtac ctttcgcact tcctgcggca taaacatcgt cgccagctct tccgccgaca
     6181 acatatccgg cgcaatcccg tcctgttcca gcctcatttc ccgataagcc ttcggcgaat
     6241 aatgcccgcc gtccggatgt cggggcagct cgccgtgcgg gcggttgttg tattcgtcga
     6301 tacacttgac cacatccgcg ataaaacgcg accagcccgg cagttttttc aaatatttct
     6361 gttgttcctc cgtcaaatcc ttgccttttt ccaaagcgtt aaacgcactt tccatcttgc
     6421 ggtacatcag gttcttggta ctgctgtcca tccccgcgcc cgcaaacgtc tcatactggc
     6481 gcgccatctc aatcagattg tctttccacc atcgctcgat gatgcctcgg ccttgcgggt
     6541 tgcccgcgat acccgtttca tgccggatac ccaatcggga cgtaataccc gtgatttcat
     6601 ggtctatcgt cttgccggtt tggccgccac cgttatccga gtagtagata atcggcaaac
     6661 caaagtgctt gaccccgata cgcagagcgt ccgataccgc cacacaactt tcagccaacg
     6721 agaccgaaaa cccgaccaca aaccgcgtac aaccatcaat aatcaccgtc acttccggct
     6781 taaacggcct gccatgtacc ggatgcgcca cctttgcctt aaagctatgg ccgtcgccga
     6841 tccaaacatc gttcggcttc aaagcccccc aatcacgttt cacataaggc agcagcgatt
     6901 tataagccgc ccccgttttc ctgccgcgct cctgcataat cagcgggagc ttgtcccaaa
     6961 cgcgccgcac catactcaag ttaggcacat cattgaccgg catattttcc gcttccgccc
     7021 actgcacaaa ccggcggtag ctgtgcgcca gtttcggagc cgaagggata ttgtgaaact
     7081 gcataaacat cggcaaccaa ccgtagctct caatcggctt gaccgccttc gtcgtcttcg
     7141 gagccaaagc aaccaaccgc tccgtcgcgt tttccgcttt caaataagca gaaatccagc
     7201 cgtctaaagt acgttcgcca acctttgccg tccggctgcg gtcattggcc ttttccaagt
     7261 tcccaagcgt gaccgcgtcc aatttacttt ctgccagcaa gcccaaaaac tgagccaccg
     7321 cagcctttgc agagcaaccg tattggtatt taatccccaa taccgccgcc accaccgcac
     7381 atcgcgcatc cgccaccgac cgttgtttct cgttcaacag cttggccgct tcagccagtg
     7441 cctgagccga catcgccgtc cccggtctga cttggggcaa cattttcggc atcttttccg
     7501 ccagctcgtc cgactgccgt ttcatgatgg ctgctcggat ttcaataggt agggcatatt
     7561 caacaccacc acccttacct tgacgccttc tcgtttgcca accatccctt tgcgcttttt
     7621 ttctcagccc tattactgtt cttggcatat ttggcaaccc aaaattaagc aggcttttga
     7681 gatccatata ttccatttca acccactccg agcatctctt tcaattcagc tatctttttg
     7741 tctcgacaat ctgttttctt gtaatgcgga aaaacttcaa ctaaatcttt ttgaatcact
     7801 ttcgcgattg cctccgcaat tcttttgctt cctcgtccat ttcttatgac ctcagaaaca
     7861 gattggttag ttacccctaa agccgaagcc aacattcttg ccgatatatt tttttcttct
     7921 aaggatttat agatttcgtt cgcttgcata atgcctccat gatagaatcc attacttact
     7981 taccttacag gctttaatgc ctgccttaac tgttacctgg atgatatacc caatatattt
     8041 ggtatactaa atatattggg tactattttg cggtgtttta tggaacgcat tgatttagca
     8101 ttgaatttag ttaaagagag aagccgactt ggatactctc gaaagaattt tgctgagcaa
     8161 actggatgca gtgcagaaag tttgagactg tatgaaagcg ggcaggtcaa cattcctgcg
     8221 gactttttac ttgctgctgt ccaattaggg gtggatattc aatttgtctt tacaggcatt
     8281 cattcggcaa atttaaatgc tgtttcagac gaccttaata aaaaattgga cgacgctatt
     8341 ggcaaatcaa acgttgagaa tcagattaac ggcaacgtca gtaacgctgt tatcgcctca
     8401 tctggttcgg ttgttcatca aattaatacc caaaatcacg tcatcagaac ccgtgtcgat
     8461 tcaaaacccg gcaaggaaca tataacgctt gagcaagctt caaagctgca acaacttgtt
     8521 aaacaagttg ccgcagcaga agagattgcc aaacggtcgc caaaatcaat ccgtgcaatt
     8581 tgggctagtc tgaatgctca ctgtaaagtt ccaagttaca aactaatcgc attgagcgat
     8641 tacgacaaag cagaaactta tctcagaaaa tggctgggta ggttgagcaa tacagcaaca
     8701 tcaaagaaca acgatcccga ctggcgaaaa aagaaatacg cttatatcaa attaaatgta
     8761 aaacaacttg agcttgaaga ttggttgaaa agttacctcg aaaaaaattt cgcagtagaa
     8821 agcctgactg aattaagtaa tgacgatttg caaaaaacat atgcagcagt atcgactaaa
     8881 aaacggaaaa aataggctta aacatgaaac tccgccttta aattcaagtt tcatgtttag
     8941 cttatggtct tcagatgttt tgttttttta gatgtatgat attaaaagat tttttcaaac
     9001 atggaactat tatacaagtt ccatgttcag tttctagtta aagcctttta taaacattct
     9061 aatcaaccac gccgaaaccg agccgcgcga cggcctatat gtcttgcgta taggcaatga
     9121 cctctttgtc aaacgtgtgc aacgtatacc gggcaaactg cttgtaacgt ctgaaaatcc
     9181 acgttacgca ccgtttgaaa tagatttgag taatacccaa gacgacatcg ccatcatagg
     9241 ccgtgttgag tggtatggcc ggagtattga ttaaatccat tttaaaaacc tcttaaaaca
     9301 gttttaaaaa ttccctaatc tcgtcagctt taaacagaaa accgcgcatt ccggcgcggt
     9361 tttgtgaaaa agctggcgta acttttccgg atacaaaaaa acgccgaaat ccacgtcttc
     9421 cgaagatttc agcgtttttt tactctattt gttccttgtg caaaaactaa cagtccccca
     9481 caggaaaacg tcgctctgtt ccgccacaac ggcgaaatcc tgttgagcgg catcaacatc
     9541 aaactcaaaa gcggcgattc cctgctgata cgcggcccga gcggttgcgg caaaacctcg
     9601 ctgctgcgcg cgctggctgg gctttggccg tttggcagca gcggcaaagt cagccatccg
     9661 ccgcatcaag acatcctctt cctgccgcaa cgtccgtaca cggcacaagg cagtctgcgc
     9721 gatgcgattt gttaccctgc catcgacaaa caacatccgg aactgatcga agccatgaat
     9781 acctgccgat taggttatct ggttgataaa ttagataaaa ccgatgactg gcaacacaaa
     9841 ctctccccag gcgaactgca acgtgttgcc ttcgtccgcg ccctactctc gcagcccaaa
     9901 atcgtcctgc tcgacgaagc caccgccgcc ttggacgaac cggccgaagc cgcgctctac
     9961 cgcgccttaa agcaaaaact gcccgacagc atcatcatca gcatcggaca ccgaagcacg
    10021 ctcaacgcgt tccacaatat gcgcctcgat gtcggcaacg ttgcctgcgg ttgaacgatg
    10081 ccgtctgaag ccgttttcag acggcatcgt tcaaattgga aaggcgcgcg aaaacaacgt
    10141 acaataaacc cgtttaccac ccctcggaat gccgaaccgt gaaccagctt attttcgact
    10201 ttgccgcaca cgactatccg agtttcgaca aattcctcgg cacggaaaac gcggaactgg
    10261 tctatgtcct ccgacacaaa cacggacagt ttatctatgt ctggggtgaa gaaggcgcgg
    10321 gcaaaagcca tcttttgcag gcgtgggtcg cacaggcgct cgaagccggc aaaaacgccg
    10381 cctatatcga tgccgcctcc atgccgctga ccgatgccgc gttcgaggcg gaatacctcg
    10441 ccgtcgatca agtcgaaaaa ctgggcaacg aagaacaagc cctgcttttt tccatcttca
    10501 accgcttccg caacagcggc aaaggctttt tgctgctcgg ttcggaatac acgccccagc
    10561 agcttgtcat ccgcgaagat ttgcggacgc gtatggcgta ctgcctcgtt tacgaagtca
    10621 aacccttaac cgaccaagaa aaaatcgacg cgctcgccag tatggcggcg gcacgccaag
    10681 taaccgtcga ttccgaaatt ttcgaatacc tgctcaaaca ctggcggcgc gatatggaca
    10741 gcctgatgat gatgctcgac acgctggaca actacgccgt cacaatgggc aaacgcatca
    10801 ccctgccgct tttgcgccag cttttgaaac aacaggaaac ccaatgaaaa acctcgccat
    10861 cttcgacctc gacaacaccc tcatcaacac cgattccgac cacgcctggc cgcaatacct
    10921 catcaaaaaa ggcttggttg acgctgccga aaccgaagcg caaaacgaaa aattctaccg
    10981 cgactaccaa aacggctgcc tcgacatcga cgcattcctc aaattccacc ttgccccgct
    11041 cgctcgttac agcaaagaag agctggcaga gtttcaccgc gaatttatgg cggaatacat
    11101 catcccccac atctcgccta tgcagcgtat gctggtgcag agccaccaaa tggcaggcga
    11161 cgaaaccctt gtgatttcct caaccaacga gttcatcatc acccccgtct gccacctttt
    11221 cggcatcacc aacatcatcg gcacacaact cgaaaccggt tctgacggcc gctacaccgg
    11281 caattacatc ggcacgccca gcctcaaaga aggcaaaatc acccgcctga accaatggct
    11341 tgccgaacgc ggcgaaacgc tccaaagcta cggcaaaacc tatttttaca gcgactccaa
    11401 aaacgacctg ccgctgctgc gccttgtcag cgaacccgtc gccgtcaacc ccgatgccga
    11461 gctggaaaaa gaagccaaag aaaaaggctg gccggttttg aatttcaaat gacgcaatgc
    11521 cgtctgaagc ccgattcggc gttcagacgg cattgaggct gaaatccaaa aaactcaaag
    11581 ccacaggaat ttatccggaa aaacaaaaaa cacaggaatt catcgggaaa aacaacaatc
    11641 tttccaccgt cattcccacg aaagtgggaa tcttaatccg tccgcacgga aacttatatt
    11701 tcgtcatttg cacccgacat aattcaatac tttattttgc aataaattaa cggatgctga
    11761 caaattagat tggattaatt accctattat ccatattggg ttatcgggtt gctaattgag
    11821 cagagcgtag caaaccataa agtgagtgtt tccacccact ctgcatttac tatgaagtgg
    11881 ttattaaata tgataatgag acctattaaa tttagtatgg taaatatgtt attatttatt
    11941 gttatatgta gttcattttt tgatctgctc gttcaattat gtacaatttt atttcatagc
    12001 caaaaaatat actttattac attattttta ttatttattt ttaattttgt tacaaaatct
    12061 atctatatgg caattattta tcctatttta tattttttta cgataaaaaa atattatcct
    12121 tactctagga aagtgataat tctattatca ttagcattat ctatatattt tagttttatg
    12181 gacttttact ttttttccat atattcagat aaccttagct atgaaacgga gcctttacat
    12241 ttatacatcc ctattattat taattttttc tcacttttag tttctaattt tattttatct
    12301 tttatcaaca agtaaatgta tatacaaact acaatccaaa agatcctaag caaaccacca
    12361 atcccacacc acccttaccg gttcaaatcc gcacaaaaac ccacatcccg tcattcccac
    12421 gaaagtggga atctaggacg tatagtggat taacaaaaat ca
//
LOCUS       DAWGBY010000051        12060 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.051, whole genome shotgun sequence.
ACCESSION   DAWGBY010000051 DAWGBY010000000
VERSION     DAWGBY010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12060
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.051"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..548)
                     /locus_tag="WHG62_001191"
     CDS             complement(<1..548)
                     /locus_tag="WHG62_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ1725301.1"
                     /translation="MFCTVSHLRRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQR
                     LKQQAADLGITHAVTFLGALQPEAVLDLMRNSDAFVLASRTETFGVVYIEALSQGLPV
                     IATRCGGAESIVSDGNGYLVPVDDDDALADALIKMYEHHSDFEPARLRENCLNEFGEN
                     AVIGRLIGIFRQAIAEYGKKIPV"
     gene            complement(580..963)
                     /locus_tag="WHG62_001192"
     CDS             complement(580..963)
                     /locus_tag="WHG62_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ1725302.1"
                     /translation="MYFFPRFPFIDIDCIRWVCAGLKAFKHYIRENGLPDLIHAHRMN
                     YAGILAQKISQKYGIPYVVTEHSSTITRGLIRPHQWQPMEKAAAHASALLAVSRHFAH
                     VLQHKYGCEWQYLPQHTGRNIQPTV"
     gene            1332..2036
                     /locus_tag="WHG62_001193"
     CDS             1332..2036
                     /locus_tag="WHG62_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ1725303.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNSFNRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASYGVEGTDSVA
                     PGVEEISISVNGTVQF"
     gene            complement(2101..2667)
                     /locus_tag="WHG62_001194"
     CDS             complement(2101..2667)
                     /locus_tag="WHG62_001194"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ1725304.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2733..3148)
                     /locus_tag="WHG62_001195"
                     /pseudo
     CDS             complement(2733..3148)
                     /locus_tag="WHG62_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3210..4109)
                     /gene="rdgC"
                     /locus_tag="WHG62_001196"
     CDS             complement(3210..4109)
                     /gene="rdgC"
                     /locus_tag="WHG62_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ1725305.1"
                     /translation="MWFKQISFYPLNKEKLPEADILADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4140..5597)
                     /gene="der"
                     /locus_tag="WHG62_001197"
     CDS             complement(4140..5597)
                     /gene="der"
                     /locus_tag="WHG62_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ1725306.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5751..6380)
                     /locus_tag="WHG62_001198"
     CDS             complement(5751..6380)
                     /locus_tag="WHG62_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ1725307.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFAVLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELAKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6381..7676)
                     /gene="hisS"
                     /locus_tag="WHG62_001199"
     CDS             complement(6381..7676)
                     /gene="hisS"
                     /locus_tag="WHG62_001199"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ1725308.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7803..8345)
                     /locus_tag="WHG62_001200"
     CDS             complement(7803..8345)
                     /locus_tag="WHG62_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ1725309.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVL
                     KKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFT
                     HHPKRQTEFAVGQIRQARAE"
     gene            complement(8517..8708)
                     /locus_tag="WHG62_001201"
     CDS             complement(8517..8708)
                     /locus_tag="WHG62_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725310.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIDSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(8741..9277)
                     /locus_tag="WHG62_001202"
     CDS             complement(8741..9277)
                     /locus_tag="WHG62_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725311.1"
                     /translation="MEKIIDSKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(9445..9645)
                     /locus_tag="WHG62_001203"
     CDS             complement(9445..9645)
                     /locus_tag="WHG62_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725312.1"
                     /translation="MQLICADWTGIGNFMKTFEKTCSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
     gene            complement(10075..10440)
                     /locus_tag="WHG62_001204"
     CDS             complement(10075..10440)
                     /locus_tag="WHG62_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725313.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFHIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(10422..10970)
                     /locus_tag="WHG62_001205"
     CDS             complement(10422..10970)
                     /locus_tag="WHG62_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725314.1"
                     /translation="MKKQITAAMMILTMIAAPAMANSMDNQIFENQVFHTRADAPMQL
                     AELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIP
                     GGVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPG
                     QGIGRHRPWESKSTDRSWKNRF"
     gene            complement(11133..11405)
                     /locus_tag="WHG62_001206"
     CDS             complement(11133..11405)
                     /locus_tag="WHG62_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725315.1"
                     /translation="MFAVIFFSTLGCILAWIRDIPKIKSKKILARSLYIIGIINVIIG
                     YVLIKNILVSVSDGGGIKYVAIYLSNLFFWTVLMYVLVKRLSKKPS"
BASE COUNT         3022 a         2859 c         2811 g         3368 t
ORIGIN      
        1 accggtattt tcttaccgta ttctgcgatt gcctgtcgga aaatgccgat caacctgcct
       61 ataacggcat tttcgccaaa ttcgttcaga cagttttccc taagtcgggc aggttcaaaa
      121 tcagagtggt gttcatacat tttgatgagt gcgtcggcaa gggcatcgtc gtcgtcaaca
      181 ggaaccaaat atccgttgcc gtctgaaaca atagattccg caccgccgca gcgtgtcgca
      241 atgacgggca atccttggga cagtgcttcg atatagacca cgccgaaggt ttcggtgcgg
      301 ctggcaagga cgaatgcgtc gctgttcctc atcaaatcca agactgcttc gggctgcaat
      361 gcgcccaaaa atgtaacggc atgggtaatg cccaagtctg ccgcctgctg tttcagccgc
      421 tgttcttcct gtccgctgcc gccgatgttc aggcgcagtt gcgggcattg tgccaacgcc
      481 cgggcaaagg cagtgagtag gacatcgtgt cctttgagac ggcgaaggtg cgagacggtg
      541 cagaacacga aatgcggttt gttgtttttt tctctttgtt caaacggtcg gttgaatatt
      601 ccgcccagta tgttggggga ggtactgcca ttcgcagccg tatttgtgtt gcaggacgtg
      661 tgcgaaatgg cggctgacag cgagcagtgc ggaggcgtgc gccgctgctt tttccatcgg
      721 ctgccattgg tggggacgga tcagaccgcg cgtgatggtg ctgctgtgtt ccgtgacgac
      781 ataggggatg ccgtattttt gggaaatttt ttgggcgagt atgccggcat agttcatgcg
      841 gtgggcgtga atcaggtcgg gcagcccgtt ttcgcggatg tagtgtttga aagctttcaa
      901 acccgcacac acccagcgga tgcagtcgat gtcgatgaac ggaaagcggg ggaagaaata
      961 tatgccgtgc catgcataga tgtccaaacc gctttgccga tattttgcaa aaccgtaagg
     1021 ccggtcagga tgcttgctgt ttctttccgc aagtagcgga acatcggtgc aagcacggcg
     1081 gttttgatgc ctttcctctg caatgccagt gcctgatttt gaaaaaaatc ccgtccacat
     1141 cctgttcgga ttgcggatac catgagggga tgacgaggac gtgcaagggt tcgggcatag
     1201 tgggattccg tatcggaaag gcggttatta taagacagac gcagaccgaa tatttaaatt
     1261 gttgccttac gctaatgcaa tttagcgcgc cgatatgcta gattggcggt tttatgagtg
     1321 aggatacgga tatgttgcgt tctattttgg cggcttccct attggcggta tcttttccgg
     1381 cagcggctga agcattgaat tacaatattg tcgaattttc cgaatcggcg ggtgtcgagg
     1441 tggctcagga tacaatgtcc gcacgtttcc aagtggcggc ggaaggacgg gacaaaaatg
     1501 ccgtcaatgc cgagtttgtt aaaaaattca acagttttaa cagaaaatcg aaaaacggca
     1561 gctttaaaac cgaattggta tcgcgcagtg cgatgccgcg ctaccagtac accaacggca
     1621 gacgcattca aacaggctgg gaggagcgtg cggaatttaa ggtcgagggt agggattttg
     1681 atgcgttgaa ccgttttatt gccgatgttc aggcagatgc cgcgttggaa tatacggatt
     1741 tccatgtgtc gcgcgaacgc cgcaacgagg tcatcgatca ggtcagcaag gatgccgttt
     1801 tgcgtttcaa ggcgcgtgcc gaaaagttgg cgggcgtttt gggtgcgtcc ggttataaaa
     1861 tcgtcaaatt gaatttggga cacatcggca gccatatcgc gggtggggga gctgctcagg
     1921 caaaaatgct tcgtgccatg ccgatggcgg caagttacgg cgtggagggt acggattccg
     1981 ttgcacctgg tgtggaggaa atcagcatca gcgtcaatgg gacggttcag ttctgatttg
     2041 aggtgaacgg taaatgccgt ctgaaacccg acgataaggg ttcagacggc attttgtgtt
     2101 tcaggctttg ggcagggtta cgccggtttg tcccatgtat ttgccgttgc ggtctttgta
     2161 tgaagtttcg cacacttcgt cgctctcgaa aaacaggact tgcgccacgc cttcgccggc
     2221 gtagattttg gcgggcaggg gggtggtgtt ggaaaattcg agggtaacgt agccttccca
     2281 ttccggttcg aacggggtaa cgttgacgat gatgccgcag cgtgcgtagg tcgatttgcc
     2341 caagcagacg gtcaggacgt tgcgcgggat gcggaaatat tcgaccgtgc gcgccagtgc
     2401 gaaggaattg ggcgggatga tgcagcagtc gtcttcaacg gtaacgaagt tttttgggtc
     2461 gaagtttttg ggatcgacga tggtgctgtt gatgttggtg aagattttaa attcgtttgc
     2521 gcagcggatg tcgtagccgt agctggacgt accgtaggag atgatgcgtt tgccgtcggc
     2581 ttctttgatt tggttcggct cgaaggggtc gatcatgccg aattcttcgc tcatgcggcg
     2641 tatccatttg tcggacttga tgctcataat gttttccttg tttcttgcag tgttcggaca
     2701 aagcattggg ggatgccgtc tgaaaacggg gcttatttgt ttttaggcag tttcacttct
     2761 ttaatcatgc cgttttcgca tttcataatg aagagggttt cgccgttttg cgagacggta
     2821 aatctgccgt gtgccaagcc ttttttgaac gtgcccgaga gtaccatgtt gcggaatttg
     2881 gtactgtcgg aattgaacgg ttcgataaat atttcgcggt tggcggcaac ggtataaacg
     2941 ccttgtccgt cgaatttgcc atttttaaac gaaccggtat agttgcgccc gtcttggcag
     3001 cgcatgtgcc tttgcctgaa ggaagcccgt cttttccgac tccgccttcg taggtgcagc
     3061 cgggttcttg ataggaagtc agaacggcgg ccgaagtggg gagggcgaac atcatggcgg
     3121 gcagtaggaa tgcgagatgt ttaagcataa gggttattcc attggatttt ggttgacggt
     3181 attttgtcgt gaaaaagccg tctgaaaaat caatcttgcc agccgcccaa ataggaaacc
     3241 agttcttcca acatggtgct gacggattcc gccatcagaa tttgcgaggc gaaggcaagg
     3301 ccggcggcat cgtcgccgtt gctttcggct tcttcctgca atacgtcgag gtattggatg
     3361 cgcttgagtg tgaagtcttg agtgaggata aaggcaattt gttcgcgcca caccaagccc
     3421 agttgggtaa cggttttacc gtttttgacg tgttgaacca cttcgtcggc ggttaaatct
     3481 tgtttggata ctttgacgac gggaacaata tcgcccgtac ctttgagttc gcaatcgctg
     3541 tctaattcaa aaccgccttc gcaatgccct tgcaacagcc agccggtcat caaggaagag
     3601 ggcgattgct tggtattcgg cagcgaggct tccaaaccgc ccaaagcttc gcgcagcttg
     3661 gtcaggatgt tttctgcttt ggcggaagcc gcgttattga cgagcaggta gccgtggcgg
     3721 gtgttaaaca ccgcttctgt acggctgctg cgggtaaacg ctcggggcag caggtcgtct
     3781 gtaatttgct ctttaagctc ttgtttttct ttgcgaccga cattgcgggc ttcattgttt
     3841 tggatttccg ctaccttctc ttccaaaata tcgcggatga cgccggcagg caggactttt
     3901 tcttcttttt tcagggcgac gcgcaaggta aagtcggcag ggaaaacgag ttcaggggag
     3961 aatgaaaccg gtgcggtaaa gccttcgctg aaccagtcta agccttggca atgggtaaat
     4021 tcagcttcag caagtttgtc ggcaagtatg tccgcctcag gcagcttttc tttgttgagc
     4081 ggataaaaac taatctgctt gaaccacata atgtttccta ttgtttgaaa tgtcgggaat
     4141 tatttgctga attgtttttt cacactgact ttggttttct tcttgaagcg gtttttctct
     4201 tctttgcggc cttcgcgttt ctcaatacgg ttgctcaggc tgacgcggcg cagcggtttt
     4261 ttcttcggtt tgtcttccgc attttcatac gggttttccg aaacattgta ttgaatccgc
     4321 aacggcgtgc cttgcaggtt gaaggctttg cggaacgttt gggtcagata gcgcgtatag
     4381 ctgtcggaaa tcgcgtgcag cgaattgccg tgtaccacaa ttacgggagg gttcatgccg
     4441 ccttggtggg cataacgcat tttcggacgc accaagccgg cacgcggcgg ttgctgacgc
     4501 tcgatcgcgc tttgtaatac gcgcgtgatt ttcggcgtcg gcatcttaat catcgccgcg
     4561 ttgtaggcag cctgaatgct gtcaaacaaa ccgtctatac cgcgctcttt caatgcggaa
     4621 ataaagtgga acttggcaaa atcgaggaaa tacagtttgc ggttgatatc gcgtttcact
     4681 tgctcgcgac gctcttcgct gatgccgtcc catttgttga cggcaaccac caaggcgcgg
     4741 cctgcttcca aagcaaaacc ggcaatcgtc gcatcttggt cggcgatgtc ctgctgcgcg
     4801 tccaatacca aaacagcgac gtttgccgct tcaaccgcct gcatcgcttt gataacggag
     4861 aatttttcta ctgcttcatc cactttgccg cgacggcgca cgcctgcggt atcgatgatg
     4921 gtaaacggtt tgccttcgcg ttcgaaatcg atgtggatgc tgtcgcgtgt cgtgcctgcc
     4981 atatcgaaag caatcacgcg ctcttcgccg aggatggcgt taaccagtgt ggatttgccg
     5041 acgttcggac ggccgatgac ggcaaagacg ggatgttttg catcggcttc ttcggcttcc
     5101 ggctctggga aggtttccaa aatatcttca atcagataat acacgccatc gccgtgcgca
     5161 cctgaaataa cataagggtc gcccaaagca agttcgtaga actcggcggc aagcacggcc
     5221 ctgttgccgc cttcgccttt gtttaccgcc agataaacag ggcgcgggct ttggcgcagg
     5281 cggtcggcaa tgattttgtc ttgcggggtc aggccggtac ggccgtccac caaaaacaca
     5341 accgcatcag cttcatcgac agcctgcaag gtttgttttg ccatttcgtg caaaatgccg
     5401 ctgtccacaa ccggctcgaa acctccggta tcgatgacca aataaggttt gctgccgact
     5461 ttgccgtgtc cgtaatggcg gtcgcgggtc aggccgggca ggtcgtgtac gagtgcgtct
     5521 ttggtgcgcg tcaaacggtt gaataaagta gatttgccga cgttagggcg gccgacaagc
     5581 gcgatggtgg gtttcattat tgggtctttc tgtgtcaagt gccgttcggg agaactgaac
     5641 acgagcaggt gtccgttgga cacggtaaat aggttcttca cggcaagagg ccataaagag
     5701 ggagggtaaa atgccgtctg ataaataatg gacagcattt cagacggcat ttatttcagc
     5761 gaatcaagtt tcatttgaac caattcgcga ccgacagaat cttgaggcat tttttctaaa
     5821 gcctgtccgt agttttttaa ggcttcctgg ctttttccct gtgcggcata gacatcgcct
     5881 ttggtttcca tcagcagggg ggcgaagtcc gcttcaaccg gcgtgtcgag cgcggcaagc
     5941 gcggcatcgt attttttttg ttgcaacaac acaacgccca gacgctgcgc cgccaacgcc
     6001 tgaatcaggc tgtctttttg gttggacaac acccatttca aatggccttc ggcaacatcg
     6061 taacgctgcg cgtcaaattc ggttgctgcc gccatcagcg tggcttgggc ggcggaaatg
     6121 gaatgggggt agctttgttg gagcttggcc aattcggcat tgatttcgct ttgcggggct
     6181 ttgttttgcg ccttttctac gatgtttgcc agcaccgccg cagcttcctg attttgggaa
     6241 gccgcacggt tttggtaaac cgtgtatccc aagtagccga gcgccgccaa aatcagcacg
     6301 gcaaacagcc atttgcccgt ggttttccaa aaatatttaa agttgtctaa ctcttgttgt
     6361 tcttcgagat gggctgccat ttatgcgttc ttccattgtt gtaaagtatg ggttaaatcc
     6421 tcggcggcga cagtttgctg accgtgtgcg ccgttcatgt ctttgagcgt aaccgtaccg
     6481 ttcgccagtt cgtcttgcgc gacaatcagg gcaaagcgcg cgccgctgtt gtcggctttt
     6541 ttcatttgcg ctttcaggct ttgatagccg gaatgctgca ttacattgaa accttgcgcg
     6601 cgcaaggctt gcgcgtattt catcacctgc aagtccgccc tttcgccttg gtgcattgca
     6661 tagacatcag gcgcagcgtt cacttccagc gagccgtatt cgctcaccaa aagcagcagc
     6721 cgttcgatgc ccatcgcaaa gccgatggac ggcgcaggtt tgccgccaag ttcctcaatc
     6781 aaaccatcgt aacggccgcc gccgcacaca gttgcctgcg cgccgagttt gtcggtcgtc
     6841 cactcaaaaa ccgtctgatt gtaataatcc aaaccgcgaa ccaagcgcgg attttcaata
     6901 tattggatac ccaaaccgtc caacatcgcc ttgaagcgtg catagtggtt ttgcgaagcc
     6961 tcgcccaaat aatccaccaa acgcggcgcg gcgttgcaga tttcctgcaa atcagggttt
     7021 ttcgtatcta aaacacgcaa aggattggtt ttcagacggc gtttgctgtc ttcgtccaat
     7081 ttatcttcat agcgtgtcaa atattcaacc aacgccgcac ggtgtgccgc tcgctcctca
     7141 cggttgccta agctgttgat ttccaaagtc aggtattcgc ggatacccaa tttttcccat
     7201 aagtcggcag acatcgcgat gatttccgca tcaatatccg gaccttcaaa acccaaagct
     7261 tcgataccga cctgatggaa ctgacgataa cggccttttt gcggacgctc gcggcggaac
     7321 atcggcccca tataccacag cttttgcggg ctattgtaca gaaggttgtg ttcgaccacc
     7381 gcacgcagac aagaagccgt accttcagga cgcaggctca aactcaaaga atcgtttgaa
     7441 tcggagaagg tgtacatttc cttgccgacc acatcggttt cttcgccgat ggagcggaca
     7501 aacaaaccgg tttgctcgac aatcggcgta cggatttgct gataaccgta agcgcgtgtc
     7561 cagcggccga ccgtatcttc aaacgcctgc caaaacgcag ccgtcagttt gaaatctttt
     7621 tgctcgacag gcagaaggtc gttcatgcct ttgacggatt ggattttttg tgccatttca
     7681 agtaagaatg cttaaatcaa attgcgggcg attatagcgg atttttaagg gcttgtgagg
     7741 atagagatgg tttgcggacg ggtaaaaatg ccgtctgaaa cagttttcag acggcatttg
     7801 acttactctg cacgtgcttg cctgatttgt ccgactgcaa actctgtctg ccgcttggga
     7861 tgatgtgtga aaaacaattt atttgaaatt gtctcggctt ttttcggcac gaccgccaaa
     7921 atcttacctg ccaaatttcc ctcacgggtt tgccaagcat ccaaaaactg cgccctgctc
     7981 attgaaacat gccccagcga cgggtcggca agcaaaaccg tattgccgtc tatcccgcgc
     8041 aataccgaga aatgatcatc cttgcggtat ttcagataca cgatgacggg gattttcaac
     8101 tgtgcgagct gctcgaaaga cagggcatag cctttcgctt caaaacccaa atctggcata
     8161 atgcgccgca tatcctcaaa cgacgcgcgc atctgctcct tatccagctt tttcaacact
     8221 tcttcttccg tcagcgtttg cccgtaaaaa ttgttcaaaa gcgtcgccac cgaagccgcc
     8281 ccacaggaaa aatccaaatc ctgctttaca atattgaaat cccgcctttc tttccaactc
     8341 tgcactttga tttttccgta aacaacagga ttatcgttaa acatcggtgc agcattcaaa
     8401 cgataagata aagaaacgac aacacacgcc aacagaaaaa catatttgaa cttcatcata
     8461 ttgtccacat aaagggcagc ctgaaaatct ttcaggctgc ccttgtcaaa ttattcctag
     8521 ctttcggctt ttttggcaaa ccaaacaatc cgattacccg cataatactt tccatttatt
     8581 gaaatccgac aagccgcgcc caaaaaatgc catgcactgt cgatttccgc agcaatcttt
     8641 gtaccgtttt cttcaaattc caaatattca cccaataata aacttgaaac agaacgcgtg
     8701 ggcagcaagt gcccacccta cgcttattca aataatttga ttaaataaag aataaagaaa
     8761 atgcatcagg aacaaaatta taatctgcca cctgactcac accgctttta aagtaagggg
     8821 catcaaaatc aaaaccgcaa aaaaaataat ttttgcattg atttttaata gatttaaaat
     8881 tcgaatatag tgtttctcca gatttaaaaa gtttatcttt atctatatat ttgatgcttt
     8941 ccctatccaa aataaatatt tcaaacatta aaaaatcatt acatgaccaa gccaaatcat
     9001 aaatttgatt caaatgggta tcataaagat aaaaataata aggtttggga acaggtaaaa
     9061 tatttaatgg aaaaggagga ctaattttct taatatctga tgactgatat ccatatcttt
     9121 ctatattctt aaaaatttca tctttcttaa gataacaaga cattctgaca atcacaacct
     9181 gttcatcgga tatattatct atttgcatgg cgcgtataac acgccatgcc tgattaaaat
     9241 tagtctccct taccttagaa tctattatct tttccaaaga tgaaaatgcc ccttatcttg
     9301 aactctccag ttagaacctg gaagtttcgt acctcttaaa tgtgtattaa tatttcttat
     9361 agtttcatta aaatgccacg cgctgccgat ttcaacggta attttcgtac cgctttcttc
     9421 aaattccagg tattccccca ttagctaacg caaagaagca gacgccattt cggcttcgtt
     9481 atgataaacc cgccttccgt tgatatagac ttccgcccct gtccgctcca aattccaaaa
     9541 attccgtact gaaatttcca tatcccgata ttgtgcagag catgtttttt cgaaggtttt
     9601 cataaaattt cctatacctg tccaatcggc acatatcaat tgcattatta catctcaata
     9661 cgataaatat ttcttaagtc aaaatgcaag cctgaccgta ccttaactgt caaaatttta
     9721 ttatttttta ttgattttaa aacaatttct gcaaaattct cttcgctttc tctctttttt
     9781 agaagcacat aagaaaaaat aaaacttccc cgattaaatt cataaatatg tttcaaccat
     9841 tcgcctcctc tttctgtaag acaagattca gtttcattct tccttattgt ataaatattt
     9901 ccttcacaaa atctgaaata aatccatctt atccataatt aaagaaaaag tttcacctcg
     9961 agattttgtc aacaattcgc aaggttgcga tgttgcaatc aaatagccga aagacatttt
    10021 ttacctcata catggtcgaa atcagtttct gttagttcag aatccatttt ttcgtcaaca
    10081 actgaatccg catttttgaa ttaacgtttt catcagctgc cgtttatcta aaccggcagg
    10141 ttcagtttca aaataagcct tatatgaaga ctgtaagcat ttcagaaaaa gatcatcaga
    10201 agacatatct gccgaatcaa atacaactgt tttgattttg gtacttaccc aaaacccttt
    10261 ttgctctttt tctactatat ggaaattcag aatatttcca accgaatcaa aagcacggta
    10321 aacatcatcc atcaaatcct gcggctctat tttcttttcc aattccgaca atccttgaaa
    10381 tatatccaaa gacacatctt caaatagaaa aaaaggagga gttagaagcg gtttttccat
    10441 gatctgtccg tagattttga ttcccaaggg cgatgacgac caattccctg tccaggcaaa
    10501 gtcttgcccg tattatccgt aactcgacga tgataatggg gaaattttcc aataggatga
    10561 cctgttctat taccgaaagg ggctatccgc atattattgc cgattttaat ctcacgtcca
    10621 tatttagcaa aggaaacaac ctttcctgcg gcacctacac caccaggaat tgcgcctaat
    10681 ccgccagcaa tagcaacatc tctaacagaa gctggtctgc ctgtcgttgc ataactaaaa
    10741 ccatgctgtg tccacatacc aatggcagca ccacccaaga tagccaatgg aagaaacgcc
    10801 ccctcagtct ccttcatctc cttctgagaa agctccgcca actgcatcgg cgcatctgcc
    10861 cgcgtatgga atacttggtt ttcaaatatc tgattgtcca tgctgtttgc catcgccgga
    10921 gcggcaatca ttgtcagaat catcatcgct gcggtaattt gttttttcat aataactcct
    10981 ttggattaca aggttggaaa atcaaagccc tgcttagaac gtatgttgca cacccaattt
    11041 caataggtaa atcagattgc aaatccagca atttgaatat tgtcattgtt ccgtgcaaaa
    11101 gggattttta ttgatgagtt gtgtactggg tttcagcttg gctttttaga taatcttttc
    11161 acaagaacat acatcaatac tgtccaaaaa aaaagatttg ataaatatat tgcaacatat
    11221 tttattccac ctccatccga aacagaaacc aatatatttt taattaatac atagccgatt
    11281 attacattta ttattcctat aatatataag gatcttgcca aaattttttt tgattttatt
    11341 ttaggaatat ctcttatcca tgctaaaata cagcccaatg tcgaaaagaa aataacagca
    11401 aacactacct tacctcctct cacttccaac caaaccgata gcaggtttgg ttggaagttg
    11461 gtttatttat tatttaacgg cgaatgtcag tgttcttacc cgtagaacct gcataaccag
    11521 ttatgccacc agcaacagtc cccactgcta cacctcgcat accattaatc agaattcttc
    11581 ctattttttc gaatccacta tttcttccaa agatgcagca aacgcaggtt gagcctagac
    11641 ccaatctacg tttgctgccg catctgatcc ctattgtttc ttatccttac atcttcctgc
    11701 cttgtcaatc aaataaagac agaagactat acaaaaactg accgacatac tgaaaatacc
    11761 tatccccttc catgcaatct ccgcaccatt gacccaatag attagactga gaaacaacaa
    11821 agccacagta taaatcaacg taaaaaatat tgcgtaaagc acaataaagg gaacttttat
    11881 ctcacggttg ttttttataa tatattcagc aacttgattt ccgaatatac ctgataaaaa
    11941 atatagtatt agatcatcca tttcgtttat cttctatgtt ttcccattgc ggcgctagaa
    12001 gactgattta atgctgcacc atgcaatata gtgaattaac aaaaaccagt acggcgttgc
//
LOCUS       DAWGBY010000052        12042 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.052, whole genome shotgun sequence.
ACCESSION   DAWGBY010000052 DAWGBY010000000
VERSION     DAWGBY010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12042
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.052"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(117..272)
                     /gene="rpmG"
                     /locus_tag="WHG62_001207"
     CDS             complement(117..272)
                     /gene="rpmG"
                     /locus_tag="WHG62_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ1725316.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(300..533)
                     /gene="rpmB"
                     /locus_tag="WHG62_001208"
     CDS             complement(300..533)
                     /gene="rpmB"
                     /locus_tag="WHG62_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ1725317.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(783..2309)
                     /gene="farB"
                     /locus_tag="WHG62_001209"
     CDS             complement(783..2309)
                     /gene="farB"
                     /locus_tag="WHG62_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ1725318.1"
                     /translation="MDYPPLKGAALAWITLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     ALVIFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     HGVSDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            complement(2333..3505)
                     /gene="farA"
                     /locus_tag="WHG62_001210"
     CDS             complement(2333..3505)
                     /gene="farA"
                     /locus_tag="WHG62_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ1725319.1"
                     /translation="MATHADETTIQNRQEANSAKVKRKRRLTALTLLFALAAVAAGSA
                     FFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVL
                     AYERAKNELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSA
                     EELAHARAAVSQAQAAVKAALAEEFSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQ
                     RTQIRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPA
                     ELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDV
                     DRHPLRIGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     gene            complement(3549..3908)
                     /locus_tag="WHG62_001211"
     CDS             complement(3549..3908)
                     /locus_tag="WHG62_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ1725320.1"
                     /translation="MINLELKAINLYDCAFEDFVPEIKDNFCVGIDLDIGTDDSDAAD
                     IFSVRICSPKWILHNCFQNQRVKWGAGMMIMNEFNHSVIKSEIEKILKECSKETWEKS
                     LTYLLRFFSWEFEDYQC"
     regulatory      4123..4167
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            4172..4645
                     /gene="queF"
                     /locus_tag="WHG62_001212"
     CDS             4172..4645
                     /gene="queF"
                     /locus_tag="WHG62_001212"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ1725321.1"
                     /translation="MSRNNEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            4722..5408
                     /locus_tag="WHG62_001213"
     CDS             4722..5408
                     /locus_tag="WHG62_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ1725322.1"
                     /translation="MYAFTDAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYIFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(5758..7050)
                     /locus_tag="WHG62_001214"
     CDS             complement(5758..7050)
                     /locus_tag="WHG62_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ1725323.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            7127..8095
                     /locus_tag="WHG62_001215"
     CDS             7127..8095
                     /locus_tag="WHG62_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725324.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSETVALATPVWQKMGMHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWFWDGTNGGAQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYASVLQQWEEHWFAP
                     IYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(8296..9762)
                     /locus_tag="WHG62_001216"
     CDS             complement(8296..9762)
                     /locus_tag="WHG62_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ1725325.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFDNRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWWQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(10004..12042)
                     /locus_tag="WHG62_001217"
                     /pseudo
     CDS             complement(10004..12042)
                     /locus_tag="WHG62_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         2772 a         3511 c         2911 g         2848 t
ORIGIN      
        1 tccttggcag acggtttgca gcagattcgc atacagcaga tgtttcaagc ggaaaagaaa
       61 cacgataaaa ataaaaaagc ctccgaacag tcggaggctt tgctttcaaa ctgaaattat
      121 ttcagtttgg tttctttgta cactacgtgt ttgcgggcaa ccggatcgaa ttttttgatt
      181 tccagtttgc cgggcatagt gcgtttgttt ttggtagtgg tgtagaagtg accagtacct
      241 gcactggatt ccagtttgat tttatcgcgc attgcagtaa tccttaataa gggtttaaat
      301 taagcttcac cgcgagcacg caaatcagcc aatacgacat caatgcctac tttgtcgatg
      361 gtacgcagag cggcgttaga aacgcgcagg cgaacccagc ggttttcact ttctacccaa
      421 aaacgacgtg attgcaagtt aggcaaaaaa cgacgtttgg ttttgttgtt ggcgtgtgat
      481 acgttgttgc cagacatcgg gcgcttaccg gtcactttgc aaactcgtgc catggtcagt
      541 ctccaaactt ctaaaatagt aaaacgtgat ttataccacg aaaaacagtg ttagttcaag
      601 tgttttagag aaaaacggct gttttacgcg gataatcctt ccgattgtcg catctgtgga
      661 acgtttgcag gtgcgaaaca gatggggcgc gattatagcg gatttcggga actgctgcat
      721 tcaaaatgcc gtccgaacat atttccagta ttttcagacg gcatttcaag ttttcaaatc
      781 cctcaatgtc caccgccgcc gccgttgtgg aacggcggtt ttgccagcca tatgacgggt
      841 atcatgataa tgaataacaa gctgcccgcc ataaagattt cgttcgagcc gataataaaa
      901 ccctgctggg taatggtatt gttgatgatg cctagggttt gaatgtcgga aacgccgtgc
      961 tgggacaaat gagcggccgt ttcgtgcaat gttgcggaat agggcgtgat gtgttcggca
     1021 aagcgtgtat ggtgcaacgc ttcgcgccgt tcccacaggg tgctgacgac ggatacgccg
     1081 acaccgccca tcagcacgcg caagaaattc gacaggctgc ctgcggcggc aatctgtccg
     1141 cccttcatgt gcgacagtgt gatggtggtc agcggcagga agaacatggc aacgcctgcc
     1201 ccctgccaaa actgcggcca gatgacgttg ccgatatcca tgtcggcata aaaatcggtg
     1261 cgccaataga aagtaaaggc aaaggtcagg aagctggcgg ttacgagcag gcgcatatcg
     1321 attttattgc cgaacctgcc gattaacgga gacaggaaga cgggcaggat gccgacgggt
     1381 gcggcggcaa gccccgccca cgtggaggta tagcccaggt tggtctgcaa cactaacggc
     1441 agcaaggtca gcgtccccat atacaccata aaacccaatg atgtggcaat tacgccgacg
     1501 gtaaaattcc gatctttaaa cagcgataaa tcgacaatcg gatatttttc tcccaattcc
     1561 caaacaataa aatacgacaa acacaccagt gcgactacgc ccaaggtaat gatttctcca
     1621 gaggcgaacc agtcgagttc cttacccctg tccagcatca tctgtaacgc gccgataccg
     1681 actaccatca atgtaagccc gacatagtcg gtcggcattt taacggtttc cgtttcccga
     1741 tatttcaaat gtttccatgt aatccatgcc gatatgatac cgatagggat attaatgaag
     1801 aaaatccaac cccaatgcca gtttccggaa atccaaccgc cgagtatcgg cccgagaaca
     1861 ggggcgacaa cgacggtcat tgcccacaat gccagtgcca gcgtccgttt tgcgggcgga
     1921 taggatgcca ttaacaggct ttgcgacagg ggaatcagcg gcccggcgat aaagccctgc
     1981 aagatgcgga aaattaccaa agcctgaagg ttgggcgcga tgccgcacag ccacgatgtg
     2041 atgacgaaac cgacagcggc ggcggtaaac agtttgacct cgccgatacg ttttgccaaa
     2101 aagcccgtta acggcacgga aacggcgttt gccacagcaa aagaagtaat gacccacgtc
     2161 ccctgagtgg ttgccgcacc gaggttgccg gcgataacgg gaacggcgac attggcgata
     2221 gtcgtatcta aaacttccat aaatacggca agccccaaag acagcgtaat ccatgccaat
     2281 gccgcaccct taagcggtgg ataatccatt gtgtcctccg tttcagacgg catcagggcg
     2341 cggattgccc gaggatttca tcgaccgtcc gatcgacttc cgaccagtcg gtactttcca
     2401 tttccggcaa tgccgcaccc ggcgtttttg aaacaggcgc gcctgcggcg gaagtatcca
     2461 ctttaaccgt catcgacaaa ccgatacgca acggatgcct gtccacatct tcgcggttca
     2521 gcacgatacg gacggggacg cgctgcacca ctttaatcca gttgcccgtt gcgttttgcg
     2581 ccggaatcag cgaaaacgcg ctgcccgtac ctgccgaaaa acctgccacc ctgccgcgat
     2641 aaacaatttg tttgccgtac aaatcggaca ccagctcggc aggctgtccg attttcatat
     2701 gccgcaactg cgtctcttta aaattggcat ccacccacac atccgacagc ggcaccaccg
     2761 ccatcagcgg cgcgcctgcc gccacctgct gcccgacctg caccgaacgc ttcgccacct
     2821 gaccgtccgc cggcgcgcgg atttgcgtcc gctgaaggtt caaccacgca tctttcaacc
     2881 tgccgattgc cgtctgaacc gccggctgtt cgcgcaaaga aacctgaccg cccaaagccg
     2941 cgcgtgccga aaattcttcc gccaaagccg ctttgaccgc cgcctgcgcc tgagacactg
     3001 ccgcacgggc gtgtgccagc tcttcggcgg acaccgcgcc cgattccgcc aaagcagacc
     3061 ggcggcgcaa atcatcctgt gcgcgtgcca aatccgcccg gcgcaaggca acctgcgccc
     3121 ccgcctgcga agtggcggca ttttgccggc ggttttgccg caccgcctga accagctcgt
     3181 tttttgcccg ctcgtaagcc agcacatcat tatcgtcgtc caataccgcc agcacgtcgc
     3241 cttttttcac ggcatccgta tcgtcgtgca aaaccttccg caccgtaccg cccttttgcg
     3301 gcgtaacctg aaccacgcgt ccggcaacat aagcgtcttc cgtttcctct tcgtgctgcc
     3361 accataaaaa aaacgccgac ccggcggcta cggcggcaag cgcgaacagc agcgtcaatg
     3421 ccgtcaggcg gcgtttgcgt ttgacttttg cgctattggc ttcttgtctg ttttgaattg
     3481 tcgtttcatc tgcatgtgtt gccattattc caattccaaa tacttctaat actatatttt
     3541 tgatttaatt agcactgata atcttcaaat tcccacgaaa aaaaacgaag taaataagtc
     3601 aatgactttt cccaagtttc ttttgaacat tctttaagaa ttttctcaat ttccgattta
     3661 ataacagaat gattaaattc attcataatc atcatacccg ctccccattt aaccctttga
     3721 ttttggaaac aattatgcaa aatccattta ggagagcata tgcgaacaga aaatatatct
     3781 gcagcatcac tatcatcagt tcctatgtct aaatcaattc ccacacaaaa attgtctttg
     3841 atttcgggaa cgaaatcttc aaaggcacaa tcgtaaagat tgatggcttt caattctagg
     3901 ttaatcattt tatattcaaa ataaataaaa ccaattaaag attggttagg attctatacc
     3961 ctggcaataa ctcaatcaag ttaatgattt agaatgaata ttcaaataaa ctgtatcagc
     4021 ccggcctcac agaactattt atatccacac atcaccgagt aaagcaatta cccatactaa
     4081 ccgaagaaaa ctacacaaat accgccactt atattacaat cgccgcccgt ggttcgaaaa
     4141 cctcccacat taaaaaacta aggaaaccct catgtcccgc aacaacgaag agctgcaagg
     4201 catctctctt ttgggcaatc aaaaaaccca atatccgacc ggctacgcgc ctgaaattct
     4261 cgaagcattc gacaacaaac atcccgacaa cgactatttc gtcaaattcg tctgtcccga
     4321 gttcaccagc ctctgcccca tgaccgggca gcccgacttc gccaccatct acatccgcta
     4381 cattccgcac atcaaaatgg tggaaagcaa atccctgaaa ctctacctct tcagcttccg
     4441 caaccacggc gattttcatg aagactgcgt caacatcatc atgaaagacc tcattgccct
     4501 gatggatccg aaatacatcg aagtattcgg cgagttcaca ccgcgcggcg gcatcgccat
     4561 tcatccgttt gccaactacg gcaaagcagg caccgagttt gaagcattgg cgcgtaaacg
     4621 cctgtttgag cacgacgcac aataaaccat ccttcccata tttcagacgg cattccttcg
     4681 atacgatatg ccgtctgaac gcctttccga aaggtttttt tatgtacgca tttaccgacg
     4741 cacagcaaca gaaggcactc ttctggctgg tgctttttca tatcctcatc atcgccgcca
     4801 gcaactatct ggtgcagttc cccttccaaa ttttcggcat ccacaccact tggggcgcat
     4861 tttcctttcc cttcatcttc cttgccaccg acctgaccgt ccgcattttc ggttcgcact
     4921 tggcacggcg gattatcttt tgggtgatgt tccccgccct tttgctttcc tacatctttt
     4981 ccgttttgtt ccacaacggc agttggacag gcttgggcgc actatccgaa ttcaacacct
     5041 ttgtcggacg catcgccttg gccagctttg ccgcctacgc gctcggacaa atccttgata
     5101 tttttgtgtt caacaaatta cgtcgtctga aagcgtggtg gattgcaccg accgcatcaa
     5161 ccgtcatcgg caatgcactg gacacgttag tgttttttgc cgttgccttc tatgcaagca
     5221 gcgatgaatt tatggcggca aactggcagg gcatcgcttt tgtcgattac ctgttcaaac
     5281 ttaccgtctg cggtctgttt ttcctgcccg cctacggcgt gattctgaat ctgctgacga
     5341 aaaaactgac gaccctgcaa accaaacagg cgcaagaccg ccccgcgccc tcgctgcaaa
     5401 atccgtaaca cagccctgcc gggaatcggg acggttgggt tttcttttat ttgcaaacac
     5461 tgtcggaacg gataaatccg gattcctacc tacttcgtca ttcccgcgaa agcgggaatc
     5521 cggtgcgttg ggtttcagtc atttccgata aactcctgcc gcgttgtatt tctagattcc
     5581 cgctttcgcg ggaatgacgg cggatgggtt tccgtgccgt ggtgtccgga ttcccgccgg
     5641 tacaggaatg acagcagtgc ttccttggct taattttatt ttaatcaact gcaaatgccg
     5701 tctgaaaacc tgtttacaga ttttcagacg gcattgtttt cgtcgccggt tcaaacttca
     5761 atccgattgc gacacggtaa ccggtatgcc gcgcaagcgc gcaagcagcg cgtccgcctt
     5821 ctgtttctgc gcggcaaacg ccgccttgtc cgcctgcgtc aattcgggtg tcggcaatgc
     5881 gactgaaaca ggattgacgg gctgcccatt gatgcgcgcc tcgtaatgca ggtgcggccc
     5941 cgtcgaacgc ccggtagaac cgacaaaacc gatgacctcg ccgccgcgca cattgccttg
     6001 tgcctgcgaa aacgcgctca agtgcgcgta cagcgtttcc acaccgttgg cgtggcgtat
     6061 catcaccgcg ttgccgtatc cgcccttccg gcctttaaag gtaatcacgc cgtcggcgga
     6121 agccctgacc ggcgttccct gcggtgcggc ataatcgatg cccgtgtgca gccgccaagt
     6181 gtgcaggatg gggtgcatgc ggtagccgaa cggcgaagaa atgcgcgtat agaccagcgg
     6241 ctcgatgttg aagccgcctt tttcctgcaa caccctgccg tcttcatcgt aataattgcc
     6301 gccccctcct ccttccttgt ccgaacggta atagaacgcc tgatgccttg tgccgccctt
     6361 gacgacttct gccgccagaa tatcgcccgc cgccacctgc tgcccgtgga aatacaggct
     6421 gtcgtacatc aggcgcacgg catcgccttc cttcaaaccg tcaaggctga agcggccggc
     6481 gaaaatcccg cttaaggatt cgcggatttc gacgggcact tccgcccgcg ccagcgaacc
     6541 gcgcgccgac gttttgacca cgaccgaacg cagcgtcggc aaaaccttca tatccgcctc
     6601 agaagccgac cgccgccata tgccgccttt cttttccaaa gcgaccagat tgcgctcgcc
     6661 gtcttcgtcg gtaaaaaact gcacttcgcg cgcgccgccg tcgccgccga ccaaaacatg
     6721 aaccgactgg tcggcacgca aatgccgcaa atcggcttcg ccgccatatt tttccgtgat
     6781 tcgggcaatc tcgtcccgcg ccatacccga acgcgccagc acgtccgcca gcgagtcgcc
     6841 cggctgcacc gcctcctgca cccaatatgc cgtctgaacg ccgctgccgc cccaagacag
     6901 cggcggcaga ttttgttcca cgcgctgcgg tctgacgcgt tccgtcctct ctgtcgaagc
     6961 aatgtatgcc gccgacacca aaataatcga aacggcaagc gcacgcagcg cgtatttccg
     7021 atgttttgcc gaaagtggga agacagccat attgttcctt tttgacggcg tttgcgccga
     7081 atcctctata atatccgccc gatccgcatt tgtcagacat caaacgatga aactcaccct
     7141 cgccctcccc tcgctcaatt tggatgaaga cgaaatccga atacctctat gcctgcccgc
     7201 cttcaacaaa atcctgcaat acggctcgct gcaccgccaa agctgcacgg cttcggcatt
     7261 ttacgcgcgt tatttgtggt gcggcagact ggcggaacgc gcggcgcaaa gcctgaatat
     7321 gccgtctgaa accgtcgcgc tcgccacgcc cgtctggcaa aagatgggga tgcatcaggc
     7381 aaatgtgctg acggcggaat atttggatgt cggtacggat gaagcggaac ggctctgccg
     7441 cgacctgtcg gcgttttacg gcgatattcc gtggcgtttc gttcccgtcc tgcccgaatt
     7501 atggctggtt tcccttcccc gcgcgtaccg ctggggcgcg aagcccgttt tggacttggg
     7561 cggactgttg ggtgcggacg atcaaccgga cggggaagac gcgttggaat ggctgcgcgt
     7621 ccaaaccgaa atccaaatgt ggctggcggc gcaccccgtc aaccataacc gcaagaaacg
     7681 cgggctgccc gaattgaacg gcttatggtt ttgggacggc acaaacggcg gcgcgcaagg
     7741 cggcacgctt ttcgccgata cggtttggag ccgtttccac cccgaccgcc gcgcattgcc
     7801 cgacaacttc cgcgcctatg aagaaacggc ggcacacctg cccgacacgc accatatcct
     7861 gtttatggac gatttgcgcc tgaccgccct gacaggggac agggagcggt atgcatcggt
     7921 tttacagcag tgggaagaac actggttcgc accgatctac gaagccgtcc gtaccggcaa
     7981 aatcaaacgg ctggacatca ccacggacgg acaacacggc ggtacgctga ccttcaaacc
     8041 cgccgacagg tggaaatttt ggcgcggcgc gaaaaccttt gacggaatct ggtgaacccg
     8101 cccgccgcaa ccgcgacaat gccgtctgaa gcccgaatcg ggtttcagac ggcattttac
     8161 ctcgcatcgc cgttatgccg gaaaaaccgg aatgcgtttc cgcacacgcg gcggcacgca
     8221 aagcaccgcc cgaaagccgc cgatgcccgc cgtgataccg ccgccggcag ggtttcctcc
     8281 gaaaaggaac agcaatcaga acgttttatt aaactcgaca aacgcccgat ttttctcgta
     8341 ttcgttgaac acatcgttac tccgcgtttc gcggtgcgac aacgtcaggc gcggcgtgat
     8401 gcctttgaaa tgcaatgccc ggtgccaaag gctcaaggat gtgttcaatt ctttatccct
     8461 gcgcctttcc cctttaaaac cgctgaaaaa gccgggtttt tcataatgcc gtttcgccgc
     8521 gccgaggcgc aacagcgaag acaggccgct gccgccccat tcctgccacc aggcaaagcg
     8581 caggccgtaa cggttgaaat tgtcgccccg gtcggcgggg ttgcgctcgc ggtaaaaatc
     8641 caaaccgccc atccaatatt ggcgcgcatt ccggtaaaac accagcgaat tggaaatttg
     8701 caaatgggta ttgtcggaac gcgcccggcg cgtattcttc aaacgccccc actccgccga
     8761 agacaacgtt tgccatttcg gggtttgcca acggttgaaa taaaggcgtg cgccgttggt
     8821 gtaagaataa gcgtcgttgc cgtaggtgcg gcgttcgtgg aacactgcca gcccggcatc
     8881 tttgcgccgg tcggcaaaac cgatgccgcc ggaaacgcct gccgtcatat cgttgaattt
     8941 cttattcccc ggataaaccc tgccggacac gtcgccgccc gccgtcgtgt accagccgtt
     9001 tttcagcgac cattttttct ccgcgccgag ccggtaattg accgccgtgc cgtccacctg
     9061 tttcgggaaa gtccatttgc cgtactgctg ccgtttcggg gcttggttga tattgtgttc
     9121 gcgggtaacg ctgaagccgc catttacctt ccacgcatcg cgttcgcgca atgccttgcg
     9181 gtacagctcg acctgctcca tcagctgcgg cggcaggttt tccgccttca ggcggtcgaa
     9241 ctggtctgcc gccgcctcgt tctgcctgtt gtcaaacaat gccgccgcca aacgcatacg
     9301 gacggcgggc gcgtcgggtt gggcggcaat caattcccgg taatgggaaa tcgcttcttt
     9361 caccctaccg tctgtctgcg ccaaaatccc ttgtgcataa agtgccaaca tcttatcctg
     9421 ctgcgcctgt tgtaggtaaa tcggcaaaat aacgcggata ccggcaatat tgtttgagac
     9481 cactgcggaa tacatcgcgc gggacagcaa ttcgggattt ttcagcaggg tttcgccgtc
     9541 aatctgcaaa acttttcctt tttcccgcac ctgccccggt accttctccc tgtcgattgg
     9601 tttgacctcc gcttcatgaa gcctgaactc gggacggctt ctcaaatccg gttcgcgcgg
     9661 tgtttcttcg gcatatgccg cgcttgccaa taaaggcagc agcagcatcc atctgtttcg
     9721 tgcaggcata aatgtcttcc cacaaaaata aaaaataacc attatcaacc ggcggattgt
     9781 atcagttttt tatgccgctg ttccaaaccc tgccgcccga tgccgcgaca atgccgtctg
     9841 aagctagaat cgggtttcaa acggcggcaa aaaaccggcg gttttccgcc ggtttcatca
     9901 tgatgccccg cccttcgggg cggcagggtt cggattggtt tgcagggcgg cgcgcggtgc
     9961 cgtgccggtg tgccgcctgt acgtcaaaac atttcccgac gcatcaaaac agccatttga
    10021 gcgacaatgc ggcttctttg tcgccgtccg tccttttgcc gtatccaatg cgtgcggaca
    10081 tatggccttt ccaaccggct tcaatgccga accgcccttc gagtgccgtc ctgcctgcca
    10141 gcgtctgttt ttcgccgtcc atttccacgc cgaaagattt tgacctgtgc aaaacattaa
    10201 aagcggcaaa aggctgaaga ttgacaccgt tacgcaaagc aaaacgggtt tttgcccgaa
    10261 tgccagcgcg gctttgccac tgaccgctgc cgagcagtcc gaccgccgtc ccctcgctgt
    10321 cggtaaagcc gccgtttacg cccaagtagg taaactgagc ctgcggttgc aggtaaaacc
    10381 gcacattatt gccttttccg acaacgcctt ccgccacaag cgcgttgtag ccgccttcga
    10441 cagaagccgt ccaacctttg gttttgtagc gttccgcacg gttttcatca ttgatgcgat
    10501 gtttgaaacg ttggtattgc aaccagccgt ccaaatacac acccgtttgt ttatcgcgca
    10561 actgatgcca cgcagcataa acacccccgc cataaccatg caaataactg cctgccgcac
    10621 cgcctttgcc gttgactgat gcgtgctggc cggccctgcc gcccatcacg ccgattgcca
    10681 gccggctgcc ttcattttgc cgtacaaaca cctcgccgcc gatttgcacg cctttgcgcc
    10741 gcccgtccgc agccgcgccg ccccgtatat tttgatgcga ccgaccgccg atgaagcgca
    10801 gccacaattt ttgacgggac ggatcggcgg catacacgtc gtcgcccctg tcggcggcac
    10861 gcagcccaaa caaagtattt gccgcataag cctgttgggc atataaaacc gcttccgcct
    10921 cggggatagc caaacgctgc acgcccaagc aaaatccgcc ttcgcattgc ttgagcaata
    10981 attcgtacag tccctgccgg taattttgtt taaacgcaaa cgaattaggg tctgcctttt
    11041 ccgccgcaat cagtttgcgc ccgtcgagcg ttttcagatt ttccggccgg cgttccaaaa
    11101 ccacgccgga ttgtccgctg actttttctt caaaggtcag ggcgggtttg tccgactccc
    11161 gcacgtcgta gccgaacagg aaatccgcac cgccctgata cgctttatgg acggtcagtt
    11221 tttcatcttt cgtgttcagg cggatgcggg cattatcgga agtttccagc atatggatgt
    11281 cggaatggcg gcgcggttcc caaagggaat ctttcagcgt catcttggtc agttccaaca
    11341 cctgtccggc gacgtgggat ttgttttcga ttttgacgtg cagtgtttta ttgaagatgt
    11401 tgtcgagatt agtctgtggt gtataaggag taagtacggc gtcttctatc aattgattaa
    11461 ttatattggg tcttttctgt ttaagtatat caaatgttcc tccaagctgt tttctataca
    11521 cttcctcaac tattttttta tttttttccc aatcttcggg tttcgtgtcg tacaaagcct
    11581 ttaattgctt cttaaccgcc tgctttaaat cagttccgta attctctgta acatatttct
    11641 taacaacggg catattatcg acggcgagga tgccgctatt gtagttttta cccgtaatat
    11701 tgatttcgtc atacccatat tcggatgaat tttgatcggt tttaccgctg gaaaaataat
    11761 gggaaacacc gtttaccggc ttgtctgaaa atgaaaaatc ggcagcatcg ccaatatttg
    11821 tagaacgagt atccgaaccg ggctgataac tgaaagcacc gaagcaatca aaagatatgc
    11881 tgcacgggcc gcgccaaacg tgggaatttc tgtcttccgc cgcttctaaa ataaatttgt
    11941 ttttaatctc ggcttctttg acgggatcgt acgcatccga acctcaaaca tatggcgtgc
    12001 aaaacagcga taaaacagat aatgttaata gattaacccg ac
//
LOCUS       DAWGBY010000053        11706 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.053, whole genome shotgun sequence.
ACCESSION   DAWGBY010000053 DAWGBY010000000
VERSION     DAWGBY010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11706
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.053"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            372..1676
                     /locus_tag="WHG62_001218"
     CDS             372..1676
                     /locus_tag="WHG62_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ1725326.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMV
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
     gene            complement(1921..3216)
                     /locus_tag="WHG62_001219"
     CDS             complement(1921..3216)
                     /locus_tag="WHG62_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ1725327.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKIDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDNTELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGAQIFEQSPMTRIEP
                     HQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFKPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVKIEYSWGGECDITANLVPHFGRLAPNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(3342..4229)
                     /locus_tag="WHG62_001220"
     CDS             complement(3342..4229)
                     /locus_tag="WHG62_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ1725328.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATRR
                     DREAAEAYRQEKLAAEKAH"
     gene            complement(4229..5194)
                     /locus_tag="WHG62_001221"
     CDS             complement(4229..5194)
                     /locus_tag="WHG62_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ1725329.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWSTLNPFGDGENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(5210..6334)
                     /gene="potA"
                     /locus_tag="WHG62_001222"
     CDS             complement(5210..6334)
                     /gene="potA"
                     /locus_tag="WHG62_001222"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725330.1"
                     /translation="MTATTASSTKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLSNG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(6529..6636)
                     /locus_tag="WHG62_001223"
                     /pseudo
     CDS             complement(6529..6636)
                     /locus_tag="WHG62_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(6715..6984)
                     /gene="rpsO"
                     /locus_tag="WHG62_001224"
     CDS             complement(6715..6984)
                     /gene="rpsO"
                     /locus_tag="WHG62_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ1725331.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(7206..8141)
                     /gene="secF"
                     /locus_tag="WHG62_001225"
     CDS             complement(7206..8141)
                     /gene="secF"
                     /locus_tag="WHG62_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ1725332.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(8145..9998)
                     /gene="secD"
                     /locus_tag="WHG62_001226"
     CDS             complement(8145..9998)
                     /gene="secD"
                     /locus_tag="WHG62_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ1725333.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPEILLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGSVWKPKAEMAGGKE"
     gene            complement(10210..10476)
                     /gene="yajC"
                     /locus_tag="WHG62_001227"
     CDS             complement(10210..10476)
                     /gene="yajC"
                     /locus_tag="WHG62_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ1725334.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            10604..>11706
                     /locus_tag="WHG62_001228"
     CDS             10604..>11706
                     /locus_tag="WHG62_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ1725335.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2917 a         3073 c         2978 g         2738 t
ORIGIN      
        1 tcctgatttt tgttaatcca ctatatttcc aattaaaaat ttttaatata ttaatcaata
       61 aattaatttt ataaaataaa aatattgtca acaatatttt gccttatcgc ccaaacctct
      121 gtatattttc ctacagtaaa ttgttgacaa tccatacgcc cacatatgcg ccgcctaagg
      181 ataaatcctc ccgccggaca acgggtgcaa gggatcggat gcgatatttc catattcaaa
      241 caagggattg gcggcacatc ggcaaaatcc ccgcgccgcc ccggtccggc agggcttgcg
      301 tccctcccgg acaagccccg accccgcctt tccgaaagac gggctcaacc attaaggaaa
      361 ctttaatcaa aatgaaaaaa cacatatggg cggcatcttt gctgccggca tccctatcgg
      421 cagaaccttt aaactggtgg aagccttatt ccgccgtcaa ttcgggcgat accgcctggg
      481 tgatgactgc ggctgccttg gtactgttga tgacgcttcc cgggctggct ttattctacg
      541 gcggtatggt gcggaaaaaa aacctgctct cgacgatgat gcacagcttt tccatcgcga
      601 cattggtggg aatcctttgg gtcgccgtcg gctattcttt agcgttcacg ccgggaaatg
      661 cctttatcgg cggtttgggg cgcgtatttt taagcgggat gcagatagac gctgccgcac
      721 agatgctgac cgtgtcgccc aatgcgccga ctgttcccga accggtattt atgttttttc
      781 agatgacgtt tgccattatt tcgaccgcca ttattaccgg cgcgtttgcc gaacggatga
      841 aatattcggc aatgatgctg ttttcgggca tatggttttt attggtttat gtgccgggcg
      901 cgcattgggt ctggggcggc ggctttatga gcaagggcgg cgtattggat tatgccggcg
      961 gtacggtggt gcacatcaat gccggtatcg cgggactcgt cgccgccttg gttttgggca
     1021 ggcgcatagg ctacgggcgc gaggcgatgc ctccgcacaa tatggcgatg acactgatcg
     1081 gcgcggcaat gttgtggttc ggctggttcg gctttaacgc cggatcggcg cttgcggcag
     1141 acgcggcggc gggtatggcg atggcggtaa cgcaggtgtc ggccgtattc ggcgcggcag
     1201 gctggcttgc ctgcgaaaaa atagcgggac acaaaccttc cgctttgggg ctggcttccg
     1261 gcgcggtttc cggtctggtc ggcatcaccc ctgccgccgg ctttaccggc ccgtcgggcg
     1321 cggccgccat cggtatattg actgccgccg cgtgctttgt gtccgtcacc gtcgtcaaac
     1381 acaaattgcg ttacgatgat tctttggacg ctttcggcat acacggattc ggcgggctgg
     1441 tgggcggaat attgaccggc atctttttcg acaaccgcat tttcggcggg gatgcggcag
     1501 tttggcagca gttgtggata caggtaaaag acgggttcgt tatggtggca tacagcgggc
     1561 taatgagttg ggcgattttg aaggtcgtgg ggaaaatctg cggcggcctg cgcgtcggca
     1621 aggatgtcga acgcgaaggt ttggatctga atatccacgg cgaacgcgtg gaataagggc
     1681 ggttatgccg tctgaagcct gaaaatcggg tttcagacgg catttttcac gtttgccgcc
     1741 gatggataaa catatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag
     1801 tacagatagt acggaaccga ttcacttagt gcttcagcac cttagagaat cgttttcttt
     1861 gagctaaggc gaggcaacgc cgtactggtt tttgttaatc cactatactg cctgcgacgc
     1921 ttaacggctg tctttccact gataatattt cgagccgagg aaagaaccga gtttgcgcaa
     1981 aaacggttgc aggataatat tcggctggcg caaccgctca aacggcttca gacggcattc
     2041 gtcccctaaa attgcttcgg caaccgccag acctgcaatg cctgttatcg ccatcccgtg
     2101 tccggaataa ccttgcgtat aaaaaacatt cggggctaaa cgtccgaaat gcgggacaag
     2161 gttggcggta atgtcgcact ccccgcccca cgaatattcg attttgacat cggcaagctg
     2221 cggaaaaact ttaagcatat cttggcggac aagctcggtc atacgcgcgg gattgtcgat
     2281 aaactcgtta tccttaccgc cgaaaagcag tctgccgtcc gcgctgaggc ggtaataatc
     2341 caaaatatgg cggttgtcgc atactgccat attgttgcgg ataagccctt ttgcacgcgc
     2401 gcccaagggt tcggtggcaa taataaaggt gctgacagca atcgccttgc gctccaaagg
     2461 cttgaatatc ggattcaaac cggcataagt attgacggcg tacaccagat ttttgcattc
     2521 gacgctgcct tcgggggtgt aaaccagcca accgttttga tgcggttcga tgcgcgtcat
     2581 cggggactgc tcgaaaatct gtgcgccggc ttcggcagcg gcgcgggcga tgcccaacgt
     2641 gtaattgagc ggatggagat gcccggacaa gggatcgaac tgtgcgcctt ggtacatatc
     2701 gctgtcaagc tgctgcttca gttcagtgtt atcccagagt tgataatgac tcgcaccgta
     2761 atgccgttgg gcgtgttcat gccactgctg caactcttcc caatgctgcg gacggacggc
     2821 aaccgtggca taaccgcgct gccaatcgca atcaatggca tgtttgcgga cgcgttcgtc
     2881 caccagttcg accgcctgca aagactgttg ccaaaaccat tgcgcctgct ccaagccgac
     2941 ctgtttttca atttccccca taccgcaggc gtaatcgctg ataacctgcc cgccactccg
     3001 tcccgacgcg ccgaaaccga tacgcgcggc ttccaacaca accgtttcat gtccctgctc
     3061 cgccaagggc aatgcagtgc acaaaccact caaaccgcca ccgatgatac aggtatcgat
     3121 tttcagacgg cattgaagtt tcggataaac agtatgagga ttaaccgaac tgaaataata
     3181 agaaggcaga tattcttgaa aatcagggcg aatcattatg tttactttat caggtatatt
     3241 ttcagacggc atgatatggt ttgccgtacc atgccgtctg aacgggaaat tactttaaga
     3301 aaacaggctg acctgataat gcggtcagcc tgccctgtcg gtcaatgcgc tttctcagca
     3361 gccagttttt cctggcggta ggcttctgcc gcttctcggt cacgcctggt tgcctgcctc
     3421 atcatccaat aattgacgat gatgaccaat gttccgatga tgccgattag gatggtcgcc
     3481 aagacattca tctgcggatc gagacccaac ttgattttgg agaaaatcac ctgcggcaat
     3541 gtggatgaac cggggccgga gaggaatgag gtaatcacca aatcatccaa agacagggta
     3601 atgccgagca gaaagcctga agcgatggca ggggcaatca aaggcaaagt gatgacaaaa
     3661 aagattttca gcggacgcgc gcccaaatcc attgcggctt cttcgagcga ttggtcaagc
     3721 tcaaccagac gcgaacggat aacaacggta atgtatgcca tgcacagcgt cgtatgtcct
     3781 aagaaaatag tgaaaaagcc acgatcgaag tagagatgtt gtaaccattc gctgccctgc
     3841 aaaaatatct gtacctgaat aatcagcagc agcatagaca gaccggtaat cacgtcgggc
     3901 atcaccatag gtgcggaaat cataccggcg aacaaggtac tgccgcgaaa acgtttaatc
     3961 cgcgccatcg catagcctgc cagcgtgccc aaaacgacgg cggcaagcga agacacaacg
     4021 gcaatccgca gcgacagcca agcggcttcc aagatggtgt cgttttccag caatgcgccg
     4081 taccacttgg tcgaaaagcc gccccaaacg gttaccagct tggattcgtt aaacgaatag
     4141 atgaccaaaa caaccagcgg gatatacaga aacgccagcg acagtgccaa catcagtttc
     4201 aagaaccaag ataatttgga tttctgcatt atttggctcc ttcttccaat tcgcggtttt
     4261 cataatgctg aaacagggca atcggcacga ccagcagcgc gaccatcacg acggcgacgg
     4321 cggaagccag cggccagttg ttttgatcga agaacgcctg ccacaagact ttaccaatca
     4381 tcaggttttc cgaaccgccg accagctcgg gaatgacgaa ctcgccgaca gcagggacga
     4441 aaaccagcat ggagcctgca ataatgccgg ttttcgacaa aggcagggta atcgtcaaga
     4501 acgatttgac cggccccgcg cccaaatcgg aagccgcttc aagcaggcgg ttgtcgagtt
     4561 tcaccagttg cgtgtatagc ggcagaatca taaacggcag ataggcgtaa accatcacca
     4621 aattgagcga aaaggcattg tagaacaaat ccaaaggctc gctgataata cccattttaa
     4681 tcaacaggtt gtttacaatg ccgttatgcc cgagcagacc catccacgca tagacgcgca
     4741 acaggaacga tgtccaaaag ggcagcataa tggcaagcag caaaccattg cggacagaag
     4801 gattggcacg agaaatcgca taggcggtcg gataaccgac caacagacaa attaccgtcg
     4861 tagtcagcgc agtcttaatt gaagaccaat aagtcatcag atagatattg ctgttttcac
     4921 cgtcgccgaa cggattgagc gtactccaaa aattttggaa gatgtctgca taattttggt
     4981 agctgacagc aatattcaga cgacccaaat cctcatctat cgtcgttaaa ggagtaaacg
     5041 gcgggatggc gatttcttgt tcggcaaagc tgattttcag cacgatggcg aacggaatca
     5101 gaaacagcac caaaagccaa atatacggta cggcaatcac cgcacgctgc cccggacggc
     5161 ggaacagttt gtttttcagt ttattaaggt tcattgcatt ccccttaaat caacggaaca
     5221 acggagtcgg ttggttttcc ggccagctga tatagacggt ttcgtcccaa gtcggcggtg
     5281 taatgttgcg cacataccag taaggggcgg ggacttggct cttgacgacg cgcccgttgg
     5341 agagtttgat atggtatatg gcgaagctgc ccaaataggc gatttctttt accgtgcctt
     5401 tcgcccagtt gtagtcgccc aaatattcgg gtttttcttt atataaatca atatcctctg
     5461 gtcgaatact aacccaaagg tcctgctcgc tcggaccacc caaaccgtgg tcgatgcgga
     5521 cgtggttttc caaaccttcg cattcgataa cggcatagtc ggcatgatct tcaatcacca
     5581 caccgtcaaa gatgttggtt tcgccgataa actcggcagt gaagcggctg ttgggatagt
     5641 cgtacacgtc gctgggtgtg ccgacttgct gcaactgacc gtcagacata atggcgatgc
     5701 gggtcgccat cgtcatcgcc tcttcttggt cgtgcgtaac cataatacag gttacgccga
     5761 cttgttccag cgtattgacc aactcaagct gggtttgttg gcgcagtttt ttgtccaatg
     5821 caccgagggg ctcatccagc agtagaattt tcggacgttt tgccagactg cgtgccaaag
     5881 caatgcgctg ctgctgaccg ccggacaatt ggtgcggttt gcgtttagca aatttggtca
     5941 tctgaaccag gcggagcatt tcttcgacgc gcgcggcgat ttcgccttta ggcattttgt
     6001 cctgtttcag accgaaggca atgttttgtt ctacggtcat atgcggaaaa agcgcgtaac
     6061 tttggaacat catattgatg gggcgatcat agggtgcaag tttggtaata tcctgaccat
     6121 caaggataat ttttccctga ttgggacttt ccatacccgc cagcatacgc agcagtgtag
     6181 attttccgct gccggaactg cccaaaaggg cgaagatttc gtgttgataa atgtccaagt
     6241 cgatgttatc gacagcgtaa ttgtcaccaa actttttcac caaaccttgg atttgcagat
     6301 aaggcttggt tgaagacgca gtggttgcgg tcataatggc aatactccaa taaaaagacg
     6361 agtaccggca aaacggatgt tcgaatgggt gataaaaagc tgtttgattg ctggcgggag
     6421 ttaaacgttt gatgccgtct gaaactcttg taaagcgcac gggcagcatg aaatggaaca
     6481 agattccaaa gaactttata ttatattagt ttatgcggtt ttcgggcaat atagtggatt
     6541 aaatttaaac cagtacagcg ttgccttgcc ttgccgtact atttgtactg tctgcggctt
     6601 cgtcgccttg tcctgattta aatttaatcc actataaata tggatttgag cttgtcggaa
     6661 agcaacagaa aagaaaacac cgcccatttt tctgggcggt gtcggaaagc gtaattattt
     6721 acgcagaccc aagcgggtaa tcaacgcgcg atacgtatcg ggctgggtac ggcgcaagta
     6781 ggccagcagg cggcggcgtt ggctgaccat tttcaacagg ccgcgacggc tgtggtggtc
     6841 tttggggttg gctttgaagt ggggggtcag gtcgttgatg cggaaagtca acagagcgac
     6901 ttgtacttcg gaagagccgg tgtcgccttc tttgcgttgg aaatctttaa cgatttgtgc
     6961 tttttgttct acggtcagtg ccataatgaa aactccaaaa tataagaatc cccataggga
     7021 ttcagacaag tttgccaagc ctgaagacaa cggcaaactc cctatgccca agataggaca
     7081 acgtggcatt atgacacaat tcccgcattt ctgcacaata ttttaagacc gtggaagtaa
     7141 ccgttaaaaa tgccgtctga agcattgtct gcttgagacg gcaatgttca gacggcatat
     7201 gcgcttcaaa ccacgatttc ttctttcttc ttcggttctt taccgatatt gtcgcggctc
     7261 aaaccgaaca ttagcagaag cgggctggca accaatacgg aagaataaat gccgaacacg
     7321 atgccaatgg tcaacgccat agaaaagccg tgcaaggccg caccgccgaa caccagcata
     7381 gaaacaacca tcgcctcggt cgaaccgtgg gtaatgatgg tgcggctcat cgttgcggta
     7441 atcgcgttgt cgatgacttc cggcacggca tgtccgcgca tcgccggctt gcggaagttt
     7501 tcacggatac ggtcgaagac gacgacggat tcgttcacag aatagcccaa tacggcaagg
     7561 atacccgcca agacggtcag cgaaaattcc cattggaaga aggcaaagca gccgagaata
     7621 atcacgatgt cgtgcatatt ggcgataatg gcagatacgg caaaacgcca ttcaaaacgc
     7681 atcgacaggt aaataatgat gccgataacg acaaaaccta aagccatcaa tccattactt
     7741 accaattcct caccgacttg cgggccgata aattcgactt ggcgcaaggt aacgtcggga
     7801 ctgtcttttt tcagcaaatc cataacctga ttggacaact gtgcggaagt aacaccttct
     7861 ttgttcggca ggcggatcat gatgtgtttg ttcgtaccca atgcctgaac ctgtacatca
     7921 cctattttca gcgtatcgag gcgttcgcgc atcttattga catccgcacc ctgctgatat
     7981 tggacttcca ttaccgtgcc gccggtaaat tcgacagaga aattcagacc tctggtaacc
     8041 aaaaagaata cggcggcaat aaaggtaacc aacgaaataa aggtcgtcag tttgccgtag
     8101 ctcataaacg gaatatcgcg tttgatttta aagagttcca tagcttactc cttgcctcct
     8161 gccatttcag ctttcggctt ccacaccgaa ccgatggaaa tattctgcaa tttgcgtctg
     8221 cgtccgtacc acagattgac caacgcacgg aatacgacga cggacgaata catcgaagtc
     8281 agaataccca aacagtgtac gaccgcaaaa ccgcgtaccg ggccggaacc gaataccaaa
     8341 agcgcgatac cggcaatcag cgaagtcagg ttggaatcga caatggtcgc ccatgcgtgt
     8401 tggaaaccga gattgattgc ctgctgcggc ggcacgccgg cacgcaattc ttcgcggata
     8461 cgttcgttaa tcaagacgtt ggagtcgatt gccataccca aagtcaacgc cagcgcggcc
     8521 atacccggta acgtcaacgt tgcctgcata gcagacaaaa taccgattag gaacagtatg
     8581 ttggcactca atgcaatggt agaaaagaaa cccatcagac gatagtaaac caccatgaat
     8641 gcagcaacga tggcaaaacc ccataaagtc gaatggaagc ctttttcgat gttctcctta
     8701 cccaaagacg gaccgatggt acgttcttcg acaatctgca tcggtgcggc aagagaaccg
     8761 gcacgcaaca gcaaagacgt atcattggct tcggctgtcg tcatgcttcc ggaaatttcc
     8821 acgcgtccgc ctgtaatggc agtacggata accggcgcgg ttacaacctc ggattttcct
     8881 tggtcgatca aaaccatcgc catgcgtttg ccgacatttg cggcagtcag ttcgccgaaa
     8941 atgctgccac ccgcgctgtc caagctcaga ctgacggcag gtgcgcccat ttggtcgaaa
     9001 ctcggttgcg catcgttgat gttgtctccc gtcagctcga cctgtttgct gatcagcaga
     9061 atttcgggac gatctccgcc gcttgaaagc agctcataac cgctcggcac gttgccttcc
     9121 aatgcctcgc gcaacttggc aggatcgtcc tccaccatac gcaattccaa agtcgcggta
     9181 cggccgatga tgtcttttgc cttggcagta tcctgaacgc ccggaagctg cacgacgata
     9241 cggtcggcac cggactgctg gatgacgggt tcggccacgc ccaactcgtt cacacggttg
     9301 tgcagggtag tgatgttctg tttgaccgca tcggaacgca ctttattgac cgcctcttcc
     9361 gaaagcgtca agacgatatt gctgccgtct gaattcagcg ttgcttcagg aaacagcttg
     9421 cgcaactgcg gcagagcctt ttgcacatca cctgcatcct gcaaagggac ggtcaggctg
     9481 tttccagcct gacgcaccgt gccgctgcgg attttttcgc ggcgcagttc gcggcggatg
     9541 tcgcccgaat aacgttcaaa cgttttctgc atcgccgctt tcatatcgac ctgcatggtg
     9601 aaatgcacgc cgccgcgcaa gtccaaaccc aaaaacatcg gattggcttt gattttcgcc
     9661 atccattcgg ggctgtccgc caacaggttg agcgcggtaa tatacccttc gcccaaagtg
     9721 ttttcgatga cgtcgcgcgc tttaagctgc gtttctgtgt ctttgaaacg cactttcagt
     9781 gaattgtcca caacaaacat cccgtcggtc tgaatacctg cgtttttcag cgcggcatcc
     9841 actttgaatt gagtctgttc gttgatgatg atggcttgtc ggttggtcga tacctgcacg
     9901 gcgggtgttt cgccgaatag gttgggcagc gaatacactg cggcaaccgc aatcgtgaac
     9961 acaatcagca gatatttcca taaaggataa cggttcatca ttgttcctta atggttggaa
    10021 ccccaccctt tcggtggtgt cggaatcggg ctatttcaga agaggcaaaa acccttccca
    10081 gccaggcaag accggaaggc ggcatcttga atatgccgcc ctgcgtgtcg gaacatggtc
    10141 aagccttcgg ttggaattca aaacaaagtg ccgcattcgg gctttccaga tgcggcttgt
    10201 cggcacaaat caatcgactt ttgcggcaat cgcattgcgt tctacttcga cctcgatttt
    10261 tgtaccctgt ccgatatcca cggtaaaaaa ctgttcgccg actctggtta ccttaccctt
    10321 gaaacctgcc gccaagacca ctttgtcgcc gactttcaag gcggcaagca ttgcctgatg
    10381 cgctttgaat ttcttttgct gcggacgcat gatcaggaag tagaacacca ccataatcaa
    10441 cactaaagga gcaaattgtg caacagcttg attcataatt tatccgttct ttctaatatg
    10501 gttgaaaatc gagaggggta tataataaca taagaccgta aacaatatat cgggtttgcc
    10561 gtccgtaccg accgtatacc gcagcctgcc cgtccacaaa cccatgtcct tgacccgcct
    10621 aatcttgaaa ttctatgcac tgttgcgcct ttttttgggc aaaaacgccc gcaccgcatg
    10681 gatttcgcat cccgcctgtg ccgggcacga acccggcgca aaccatcccg attcgcccga
    10741 ccgcatcctc tgcatcgagc aggcattgcg ccgcgccggt atttggcagc acctccaaac
    10801 catagaggcg gaagaaatca gcgatacgcg cctcgcactt gtccactcga gcaaatatct
    10861 gaaccgtttg gaatcttgcc tgccccaaaa aggcaagatt ttccgcctgg ataacgacac
    10921 tgcaatcagc acaggctcgc tgtctgccgc acactttgcc gccggttcgg cagttcaggc
    10981 agtcgacatg gtcatgaacc gtaaagcatg gcatgccttt tgcgccgccc gcccgcccgg
    11041 acaccatgcg ggcagcggca aagccggcgg attctgcctg ctgaacaacg ttgccgccgg
    11101 cgtcatgcat gccattgccg aataccgcct gaaacgcatt gccgtcatcg atttcgatgt
    11161 ccactacggc gacggtacgg cagaaatatt caaagacgat ccgcgcatcc tgtttttcaa
    11221 cctgtttgaa accgaccttt tccccttccc cgaaaacaac gatatgcccg acggcggcaa
    11281 tatggtgcac ctgcccttgc cgccgggaac gggcagccgc acattccgcg aagccgtccg
    11341 caggcagtgg ctgccccgac ttgccgcatt caaacccgaa ctggtgctgc tgtcggcagg
    11401 attcgacgca caccgtctgg acgaatcggg caggctcaac ctgcacgagg cggattttgc
    11461 ctggctgaca cacaaaatca ttcagacggc atcgggctgc cccggcaaaa tcgtatccgt
    11521 actcgaaggc ggctacaccc ttgaacctct ggcacaatct gctgccgagc atatccgcgt
    11581 gctggcaggg ctgggcaaat ccgatgccgc aaccgcctat cagaaaacac tggacccaac
    11641 aaaaaaacgg tttgccaaac cgaaaaccgg acaggtgcgc caacctaccc aatccgaccg
    11701 ttacga
//
LOCUS       DAWGBY010000054        11612 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.054, whole genome shotgun sequence.
ACCESSION   DAWGBY010000054 DAWGBY010000000
VERSION     DAWGBY010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11612
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.054"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(400..1446)
                     /gene="recA"
                     /locus_tag="WHG62_001229"
     CDS             complement(400..1446)
                     /gene="recA"
                     /locus_tag="WHG62_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ1725336.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEVANEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            1700..2464
                     /locus_tag="WHG62_001230"
     CDS             1700..2464
                     /locus_tag="WHG62_001230"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ1725337.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEILHHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRCAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2484..4499
                     /gene="rep"
                     /locus_tag="WHG62_001231"
     CDS             2484..4499
                     /gene="rep"
                     /locus_tag="WHG62_001231"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ1725338.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDNLKKSGAAD"
     gene            complement(4567..5625)
                     /gene="dinB"
                     /locus_tag="WHG62_001232"
     CDS             complement(4567..5625)
                     /gene="dinB"
                     /locus_tag="WHG62_001232"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ1725339.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
     gene            complement(5769..8858)
                     /locus_tag="WHG62_001233"
                     /pseudo
     CDS             complement(5769..8858)
                     /locus_tag="WHG62_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            9132..9911
                     /locus_tag="WHG62_001234"
     CDS             9132..9911
                     /locus_tag="WHG62_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ1725340.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYGHSFHFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(10111..11523)
                     /locus_tag="WHG62_001235"
     CDS             complement(10111..11523)
                     /locus_tag="WHG62_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ1725341.1"
                     /translation="MLFEFKENKMIVASRWPLLEKAFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEEWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDGMGVLACFDGGGAINYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFP
                     ALGRLHAHKVKAELVRHYGADCYVSAKNLLKTFTTVRFEKGSDGMLDAKTAALKNGVA
                     DNPPTGLFVNKKAARRALSLWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACG
                     RSDEQVLAFAHKLPVLDWGKMHEVEITETDPLTREKVVLHGMGGALEMDGGLWYFDKD
                     LPDVFKAKFKTDRKNIKEIG"
BASE COUNT         2833 a         3241 c         2819 g         2719 t
ORIGIN      
        1 ttcgcgggaa tgacggcata ttttttgcat ttgatataaa gggtcgtttg aattttgttc
       61 agcaagtgca aagtgttgca cataaaaggg cgcaggatag aggcaaagcg ggcgtaggtc
      121 gggctgtagc aactgtattt ttcaccccgt cgggcaaaaa tatagtggat taacaaaaac
      181 cagtacggcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggta ctgaagcacc
      241 aagtgaatcg gttccgtact atctgtactg tctgcggctt cgtcgccttg tcctgatttt
      301 tgttaatcca ctataccaaa actcaaatca agccgttcgg aggcggctca aaaaaacggt
      361 acttcgcagc agaagtaccg tttatcggga tttcaggttt tattcttcgg ggcgttcgcc
      421 gtcggtttcg tcctgcgtcc cttcggtgat gtgcatttct acgccgttga gggcgcggat
      481 ttttgcgtcg atttcattgg cgacttcggg attttccttc agccagacgc ggacgttgtc
      541 tttgccctga ccgattttcg cgccgttgta gctgtaccac gcgccggatt tgttgatgat
      601 gtcgtttttc acgccgatgt cgatcaattc gccttcccaa ctgatgcctt ctccgtagag
      661 gatgtcaaac tctgcctgac ggaacggggg ggcgactttg tttttgatga ctttgacgcg
      721 ggtttcgttg cccaatacct cttcgccttt tttgatggat ccggtgcggc ggatgtcgag
      781 gcggacggaa gaatagaatt tcagcgcgtt gccgccggtg gtggtttcgg ggctgccgaa
      841 cattacgccg atcttcatcc ggatttggtt gatgaacaca accagcgtgt tggttttttt
      901 gatgtgtccg gtcagtttgc gcaaagcctg gctcatcagg cgcgcctgca gtccgacatg
      961 gctgtccccc atatcgcctt cgatttcggc tttggggacg agtgcggcta cggaatcgac
     1021 gactaccata tctatgccgc ccgaacggac gagtgtgtcg cagatttcca aagcctgttc
     1081 gccggtatcg ggctgggaca ggtaaagctc ttcgactttt acgccgagtt tgcgggcgta
     1141 aacgggatcg aaggcgtgtt cggcatcgac aaaggcgcac acgccgccgt ttttctggca
     1201 ttgggcgacg gcttcgaggc agagggtggt tttgccggag gattctgggc cgaagatttc
     1261 gacgatgcgc ccgcgcggca gaccgccgac tccgagggcg aggtctaatc cgagcgatcc
     1321 ggtggaaatg acttcgaggt tttcttcctg ctggctgccg tccattttca tgatggcgcc
     1381 tttgccgaaa cttttttcga tttgcgccag tgcggcggca agtgctttgc ttttgtcgtc
     1441 tgacattggg gttactccgg aacaaatgcg gtatgtggga tgcggcgcaa cacgggctgc
     1501 ggcgcgggat gtgtatcgtt ttcccgatgt gcgggctatc ggtaatgctg cttcacgagg
     1561 ttgccattat cgcatatttc cttgcttgcc gatatgcggc aggacgcggc ggcttgtgcc
     1621 ggaatggaat ctggatgccg tctaaaaggc ggccggcttt gttataatgg cggctgtttt
     1681 ttctgtgtgt gcctgtttta tgtgttcctg ccttgttgtc aaaaataccg ttatcggaag
     1741 cggacgcacc aaaatcgccg tgccgcttgt cgcccgcgat gccgccgaac tttccgccgt
     1801 acttgagcaa atcaaaaata tgcccttcga tattgcggag ttccgcgccg actttttgga
     1861 atgcgcgggc agtatcggcg aaatattgca ccacacgcag accgtccgcg acgcgctgcc
     1921 cgacaagccg ctgctgttta cgttcagacg gcatggcgaa ggcggctcgt tcccgtgttc
     1981 ggacgattat tattttgaac tgctcgacgc gctgatcgaa agccgcctgc ccgacatcat
     2041 cgacatcgag ctgttttccg gcgaaaccgc cgtccggtgc gccgtggcaa atgctcaaaa
     2101 aaacggcatc gccgccctgc tctgcaatca tgagtttcac cgcacgccgc cgcaagaaga
     2161 aatcgtatgc cgtctgaaac agatggagga ctgcggcgcg gacatctgca aaattgcggt
     2221 gatgccgcaa agcgcggaag atgtgctgac tttgctttcc gccacgctca aagcgaaaga
     2281 gcttgccgcc aaaccgattg ttacgatgtc gatggggcag acgggggcgg tcagccggct
     2341 tgccggacag gtgttcggct caagcatcac gttcggttcg ggaacgcaaa actccgcgcc
     2401 ggggcaaatc ggcgtatccg ccctccgtgc gacactcgac tgcctcgaaa acggcgcaga
     2461 ctgatttcag acagcatcaa aacatgatga aactcaatcc ccaacagctc gaagccgtcc
     2521 gctacctcgg cggcccactg ctcgtccttg ccggtgcagg cagcggcaaa accggcgtga
     2581 ttactcaaaa aattaagcat ttgattgtca atgtcggcta cctgccgcat accgttgccg
     2641 caattacctt taccaacaaa gccgccgcgg aaatgcagga gcgcgtcgcc aaaatgctgc
     2701 ccaagtcgca aacgcgcggg ctgacaattt gcacgttcca ttctttgggc atgaagattt
     2761 tgcgcgaaga ggcgaaccat atcggttaca aaaaaaactt ctccattctc gattctaccg
     2821 acagcgcgaa aatcatcggc gaactcttag gcggtacggg caaagaagcc gtattcaagg
     2881 cgcagcacca gatttccttg tggaaaaacg atttaaaaac gcctgaagat gtcgttcaga
     2941 cggcatcgaa catttgggaa caacaaaccg cacgcgtgta tgcgagctat caggaaacct
     3001 tacaaagcta tcaggcagtg gacttcgacg acttgatccg cctgcctgcc gtgctgttgc
     3061 agcaaaacag cgaagtgcgc aacaaatggc agcggcggct gcgttatctg ctggttgacg
     3121 aatgccaaga tacgaatacc tgccaattta cgttgatgaa acttctgacc ggcgcggaag
     3181 gtatgtttac cgccgtcggc gacgacgacc agtccatcta cgcatggcgc ggcgcgaaca
     3241 tggaaaacct gcgcaaaatg caggaaaact atccgcagat gaaggtcatc aaactggagc
     3301 aaaactaccg ctccaccgcg cggattctca aaatcgccaa caaagtcatc gagaacaacc
     3361 ccaagctgtt caccaaaaaa ctttggtcga aattgggcga aggcgagccc gtcaaagtcg
     3421 ttgcctgcca aaacgagcag cacgaagccg actgggtcgt cagccaaatc gtcaaacaaa
     3481 aactcatcgg cggcgacaaa acccaatatg ccgatttcgc cgtgttgtac cggggaaagc
     3541 atcaggcgag gattttcgag gaagcattgc gcggcgcgcg catcccctac cgtctctccg
     3601 gcggacaaag ctttttcgac aaagccgaaa tcaaagacgt gttgtcttat gtgcggctgc
     3661 ttgccaaccc caacgacgat cccgcctttc tgcgtgccgt taccacgccc aaacgcggca
     3721 tcggcgatgt aacgctgggc aagctcaaca cttacgcgca cgaacacgaa tgcagcctgt
     3781 atgaagccgc gcaaaacgaa gaagccctcg ccacgctgaa caataccaac cgccaacacc
     3841 tgcaagcctt tatggatatg ttcggcagtt accgtgccaa agccgaaacc ggcgaagcgg
     3901 gcgagttcat caacagcctg ctcgaagaaa tcgactatga aaaccacctg cttgccagtg
     3961 aagaaggcaa agctggcgaa atcaaatggc gcaacgtcgg cgatttggta tcatggtttg
     4021 cgcgaaaagg cggggaagac ggcaaaaaca tcatcgaact cgcccaaacc gtcgccttga
     4081 tgacgctttt ggaaggaaaa gacgaagaag aaaccgatgc cgtctcgcta tccacgctac
     4141 acgccgccaa aggtttggag tatccgtatg ttttccttgt cggttgcgaa gaaggcgttt
     4201 tgccgcacaa cgacagcatc gaagaaggca acgtcgaaga agaacgccgc ctgatgtacg
     4261 tcggcatcac ccgcgccaaa cgccaactca cactgaccca ctgcgtcaaa cgcaaaaaac
     4321 aaggcacatg gcagttcccc gaacccagcc gattcataga cgaaatgccg caggaagatt
     4381 tgaaaatcct gggtcgcaaa ggcggcgaac cgattgtcag caaagaagaa ggcagacgca
     4441 accttgccga tataatcgga aggctcgaca acctaaaaaa aagcggcgcg gcggattaaa
     4501 ccggagccgc aatgccgtct gaaggcttca gacggcatat tttttggacg gcgcgcgtaa
     4561 agcggtttac gcccacaaat cctgctgctg gtttttcggc acaagatgcc ccacgccgat
     4621 accgataagg cggaacgcgt cttccgtctg cggcgggacg cgcgccatca acatttgcgc
     4681 agcctgcagc agagctgcgc agtcgggcaa tacggaggaa taagtcagtg tgcgcgtgat
     4741 gatgcggaaa tcgtaggtct tcagcttgag cgttacgctt tgggcttcga cgtttttgcg
     4801 cgtgatttgc cgccacaagt cttcggcaag atgggggagg tgtccggcag cctgctcgag
     4861 cggcaggtct tcgggcaggg taatttctgt ggagatttgg aggcgttcgc gttcggcttt
     4921 gacggggcgt tcgtccgtac cgcgcaccaa atcatagagg cggtatccgt agcgtccgaa
     4981 atggtttaag agttcgccgc gctcgaaacg gcgcaagtcg cccgccgtcc gcatacccag
     5041 cgactgcatt tttttcagcg ttaccttgcc cacgccgggg attttgccca aaggcagggt
     5101 ttccaaaaat gccatgactt tgtgcggcgg caacacaaac tgcccgttcg gcttgcgcca
     5161 gtccgacgcg attttcgcca gaaatttgtt cggcgcgatg cctgcggatg cagtcaaacc
     5221 tgtttccgca aaaatggcgg cacggatttc tttggcaact tcactggcgt aagggatgtt
     5281 tttgaaatta cgggtaacgt caagataggc ttcgtccagc gacaagggtt cgattaaatc
     5341 ggtataacgc ctgaatacgg cgtgaatctg cgcggaaacc tgacggtaca aatcgaaatg
     5401 cggcggcaca tacaccgctt gcggacacag ccttttcgcc gttgccaccg acatcgcgga
     5461 atgcagcccg aactgccgtg cctcatacga tgcggcgcaa atcaccgaac gcgcgccctc
     5521 ccacgcgacg accaccggcc gccctttcaa atgcggctgt tcgcgcagct ctaccgatgc
     5581 gtagaatgcg tccatgtcga tgtggataat tttgcgtgaa gacatcggct cttctgagga
     5641 taaaagggat attctactgc cggcatcggg caaattccaa atatacgccc cgataggcct
     5701 gcctccataa aaatgccgtc tgaaacatac cctgtttcag acggcatccg caaaactacg
     5761 gttttcaatt aaaactgcca atccagtttc atgctgacag tgcgcggctc tccatagaag
     5821 ttgtttgcgc cgcgcgtacg gttgtagttg ttctcaaaat aagtgcgtcc gtttaagttc
     5881 gtaccgatga ggctcaattt ggcgtgtttg cccaattcgt aacggacgaa accgtctatc
     5941 agcccgtagc cgccctgacg gatgttgtac aggctgcttg tgccgctttg tgcggacacg
     6001 ccgccgccga cggtcagccc cgtattcggt atatggaagc tcgttccgaa acggaatatg
     6061 tgcacgggtg tgaaattgct gaagttgtac gggtctgcac tggaattttt ggcaaggcgt
     6121 tcggcgttga cttcggctgc attcctatac ctgctcttgt tgtaggtgta acccgcaaag
     6181 actttccaat cttcgttcaa ctcacccgac aactcgaatt ccgcacccct gctgaccact
     6241 ttgcctatcg gtttggcaac ggtttggaac gacccctgct tgccgcctgc tccgggaaca
     6301 tagccaaaat cgacgaccgt gcggtttttc tgttcgagat aaaacaatgc gaacgaagca
     6361 ttcagccgtc cttgcaagaa cgcgcctttc cagcctacct catagtttgt gccgaccaaa
     6421 ggcggtaaaa cggttttggc actgacatcg acattatcct gctgtttgaa gattttggta
     6481 taacttccgt aaatactctg ttgcggtgtc aaatcatagg taatgcctgc atagggcgtc
     6541 aatttatgac cttgcatctt ggccgtgtaa tggtcctgat ccgccttaat gctcgatgcc
     6601 gtctgaaaat cgcttgccgg ctgcccatag cggacaggca tatctttggt ttgcgaggtt
     6661 tcatagcgcg tgtagtgcag cccgcccaaa aggtgcagtc ggccggttac gttgaaacgc
     6721 gtgctggcag tcagcgaatg ggttttgttg gtgttgaggt atttggcgta gttatacagc
     6781 gcaggaacat ggtcatcggc cactttaaca gttttccaaa ccggcaccgt accggaaaaa
     6841 ccggtaaaga caggcgagcc gtcgggattg gtctcctgaa tcttgttgcc tttttcgtcc
     6901 agctcatata catcgacata taccggtgtc cggctgccgc tgtattcgtc atagtaatac
     6961 acctgcttgc cttcggcatc gagcttgggc tcggttttta ttttcttggc attcctgcat
     7021 tcttcggcat aaacggtacg gttgcctttt tcatcgtacg cctgccaatc gggttcttta
     7081 tgccccctga ccaaaggaga agacaaatca ccgtccggct cctcctgaca acttcccgca
     7141 tacacgccgt gcgttgcccc tgtattcgga cgtactctgt ggcggcgttc gtagatttcc
     7201 agatattcgg aacgtatctt ttcatcgccg taggcatagc cgacaaagaa atcatgctcc
     7261 cgcccgaaca gcccatatgt gccggtcagg tcaagtttga ttccccattg gcggtcgtct
     7321 ttggtatgcc gcaacggcat ataactgtat cgtcggttgg cggtagcctt ccgattaaag
     7381 gaagagtcat acagactgtt tggaaaacgt tgtgccgcat tattaaagat gccctccttc
     7441 gcaagggctt tatcgacaaa ttccgccttg tcggcatcaa cgcccggatc cccccaagaa
     7501 ccttgacaga taaagtccag cgcgaaaggg gcactcatac actcgtcaaa accggctttg
     7561 cgttctgcgg cacggcggct gcgatactgt tcgaaagcag tattatcgaa acggttttta
     7621 acaaaatcgt ctttgcgctc acggtattcc ttggcggttt cgtcacgata tgctttcagt
     7681 ttctccaatg ccttatcttt cggctcgaac gggatgactt cgtttttttc ggtcaaaaag
     7741 cctaccgcat ccccccccga caaacccgcc gcatgttcgt ttttcagaaa aaactgcccc
     7801 accttcgcat cggattcatt cttggtataa gacacttcgg cattgagctg ccaaccgttg
     7861 tcaaacacat gtttgaaacc tgagaaaagg ttgtatttgt cggcacgcaa ccgcgaccaa
     7921 tcctccccca aataagtgtt gcgcggcagt tacaaaggcc ggttgcaggc aggcgttgaa
     7981 ctgaacgggg cagttttctg attctcacag ggcaaaataa tgcccgaaaa atcagggacc
     8041 tccctactct tctgatacat accgcccaaa gtaagcacac tgctgtcgcc cgcatcggct
     8101 tcagcaatgc cgtaaaccat atgtttcctg ccccaaacgc ggtctttaaa cgatttttta
     8161 tactcttccg cacccaccaa ccttccgcgt aaggtattcg ccttattcag gctgcctgaa
     8221 acatccaaca ctgcacgccg gctgccgcga tggtcgacgg tcagctctcc ggtatgtttg
     8281 aaagaagcgg taggtcgctt acggatcaaa ttgacggttc cacccggctc tgaattggat
     8341 tgggtcaacc ctgttgcacc ccgtacaact tcaatatggt cataaaccgc caaatcggta
     8401 ctcggagaca cgtcgatttt cgccgtatat cccgaacggc ctgcaacatt gacggtaata
     8461 ccgtcttcac caatctgatc aatatagaaa ccgcgtgaca aaaaccgcgt ctgcaagcct
     8521 gaatcgcgca caacgttgac acccgtcgtg tttttcattg cctcttcaag cgtatgcacc
     8581 gccttatcgt caaggcggct gcgcgtgatg acgctgaccg actgcggcgt atccttgccc
     8641 gcaatcctca tacctgtggc ggtggacatc cgatctatcg tataagaacg ggtcttttcg
     8701 gtcttgcccg acaaagcatg agagccgcgt acgttgaccg catccagact gacgatattg
     8761 ccgtctgaaa caggcacaac accgtctgca aaagaaccac cgtaagccga taacagcata
     8821 acggtcagaa ttttaagtga aaaatgattt tgattcatag agacctctgt aatatgcaag
     8881 tgtgcaaatc gtccaaaggc tctcacaact gttttgattt tttatattaa ttgaaaaaaa
     8941 gtaattctca attaaattta tagataggat tgtattccca ttttgacaaa aaacaaactg
     9001 ctccttaccg tttatttcaa aaaacgataa tattgtattg aaaaatatcc gaatttaaat
     9061 acagatcgtc aatgcggaaa aaaacaccca aattggctat aatcccgaca aacacactca
     9121 aggacaacaa catggcagcc tcgcccgaag caaaattcac tgaagaaaag attttgtggg
     9181 tcaaacacca cacgccgaaa ctcatcactt tcgccatcag ccgtcccgaa tcctaccgtt
     9241 ttaaagccgg acagttctcc cgactcggtt tctacgaagg ggaaggcttt atttggcgtg
     9301 cctactccat cgtttccgca gaatatgcag acacgctcga atattttgcc gtactcatcc
     9361 aagacggccc catgtcggcc cgtttcgcca aaatgcaaca gggcgacacc atcctgctcg
     9421 ataaaaatgc caccggcttc ctcctgcccg aacgcttccc cgacggcaag gatttggtga
     9481 tgctctgcac cggctccggc atcgccccct tcctttccat tctcgaacaa cctgaaatcc
     9541 gacagcgttt cgataccgtc aacctgatac attccgtatc ttttcccgaa gaattgattt
     9601 tcaacgaccg gctcgccgca ttgtccgaac atcccctggt aggcgaatac ggacactcgt
     9661 tccatttcgt ccctgttacc acccgtgccg ccaacccctc gggcttaagc ggaaaacgca
     9721 ttccggaact cttaaaaaac agcagcatcg aacaggcgct gcataccaag ttcaccccgg
     9781 aatccacacg gtttatgatt tgcggcaacc cggaaatggt caaagacact ttccaaacgc
     9841 tgctcgacat gggttacgcc atgcaccgca accgcattcc cggtcaaatc atgatggaaa
     9901 acggcttcta aaaaccaccc tgcttgtccg atgcctcgga cgggcaaacc ggcacgacac
     9961 gcaaaccgcg tcggcaaaaa tgccgtctga agccttcaga cggcattttc ggatacatac
    10021 aaacggcaac atattccaac ccaaaccgat taggcaatca atacgaacgg ctgtttacat
    10081 acttaccggc tttcaccaac cgatatcgat ttaaccgatt tccttaatat ttttcctgtc
    10141 cgttttaaac ttcgccttaa acacatccgg caaatcttta tcgaaatacc aaagcccgcc
    10201 atccatttcc aatgcgccgc ccattccatg cagaacgact ttttcccgcg ttaaaggatc
    10261 ggtttcggta atttccacct catgcatttt tccccaatcc aaaacaggca acttgtgtgc
    10321 aaacgccaaa acctgttcgt cagaacggcc acacgcctta tcgcatcggc ctgaaacata
    10381 tacgggacaa ggctcatcct ctgcataacc gtccggaagg ataccggctg cggcaggaca
    10441 caatccgtat gtttccgccc acaacgacaa agcccgtctc gctgcctttt tattgacaaa
    10501 taatccggta ggcggattgt ccgccacacc gtttttcaaa gccgctgttt tcgcatccaa
    10561 catgccgtct gaaccttttt caaacctgac ggtcgtaaat gttttaagca gatttttggc
    10621 agatacgtaa caatccgccc cataatgcct gaccaattcc gctttaacct tatgggcatg
    10681 cagcctgccc aatgcgggaa aaaaacggac tgcctccgta ttgcaccaat caaacgaggc
    10741 ttttccggaa tccaataaag ccgaaacctc gctatatacc cgttcaaacg taccgatata
    10801 atttattgct cccccgccgt cgaaacaggc aagcaccccc ataccgtcag gcaaaccgta
    10861 caactgttcc ctcaaccgtt cgggcagcgc ggcaggcagc ggtttcggat tcatcaaacg
    10921 gaaacactgc ctgatccact cctcgacccc gtgttccgac agactgtatt ccaaataatc
    10981 acacaatgcc gatacatccg ccatcgcacg atgcctgtct tccacaacaa tccccaacct
    11041 ttcgatgata ctgtctaggc tgtgcttgta aaattgcgga tacagacacc gggacagctg
    11101 cacactgcac aaagcaggcg atgaaaatcc gatacccgca cgatgaaact catgctttaa
    11161 aaacgtatag tcgaaacggc tgttatgtgc aaccagcaca caacccttca ataccgaaaa
    11221 caactcgccg gcaatctctg caaaaacagg cgcatcggca accatgccgt ctgaaatccc
    11281 cgtcagcccc gccacaaact gcggaatcgg tttttgagga ttaaccaacc actcatgcct
    11341 caccaccctt ccctgctcaa acttgaccaa agccacttcg gttaccctgt cttcatacag
    11401 attgccgccc gtcgattcca aatcgaccac ggcaaccggc attccaaacc gtaaaaacgc
    11461 cttttccagc aagggccaac gggaagcaac aatcatttta ttctctttaa attcaaacaa
    11521 caaaccgata ttttacactt ttaaggcatt tcatccaaca aaacaattga cagaatccga
    11581 tgattaccct aaaattcaaa tctttcttgc ag
//
LOCUS       DAWGBY010000055        11170 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.055, whole genome shotgun sequence.
ACCESSION   DAWGBY010000055 DAWGBY010000000
VERSION     DAWGBY010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11170
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.055"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            52..1005
                     /locus_tag="WHG62_001236"
     CDS             52..1005
                     /locus_tag="WHG62_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ1725342.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1122..1445)
                     /locus_tag="WHG62_001237"
     CDS             complement(1122..1445)
                     /locus_tag="WHG62_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725343.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1618..2979)
                     /locus_tag="WHG62_001238"
     CDS             complement(1618..2979)
                     /locus_tag="WHG62_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ1725344.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASQEQRTEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVEGT
                     DWE"
     gene            complement(3340..5040)
                     /gene="recJ"
                     /locus_tag="WHG62_001239"
     CDS             complement(3340..5040)
                     /gene="recJ"
                     /locus_tag="WHG62_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ1725345.1"
                     /translation="MSAKIQTRSVNTDVFNHLLTAGADPLIAQLCASRGVQSPAELDD
                     KLASLLPYQSLTNCEAAARRLADAVGRKEKILIVADYDADGATACSVGMSGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMALRAELRRRNYFSDGIKEP
                     NLGELLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDTEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQMTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAV
                     "
     gene            complement(5092..5826)
                     /locus_tag="WHG62_001240"
     CDS             complement(5092..5826)
                     /locus_tag="WHG62_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725346.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDKPADIAKLKQLGFEAVELDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPLFDTGCG
                     GRGTGFACGGSGCGRGCRPQMNSNAV"
     gene            complement(5873..6385)
                     /locus_tag="WHG62_001241"
     CDS             complement(5873..6385)
                     /locus_tag="WHG62_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ1725347.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAIVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPNADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MESQGGTGEA"
     gene            6539..7870
                     /gene="pmbA"
                     /locus_tag="WHG62_001242"
     CDS             6539..7870
                     /gene="pmbA"
                     /locus_tag="WHG62_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ1725348.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADACLMAKHIGDPDLYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(8167..8370)
                     /locus_tag="WHG62_001243"
     CDS             complement(8167..8370)
                     /locus_tag="WHG62_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ1725349.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8613..8915
                     /gene="clpS"
                     /locus_tag="WHG62_001244"
     CDS             8613..8915
                     /gene="clpS"
                     /locus_tag="WHG62_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ1725350.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8917..>11170
                     /gene="clpA"
                     /locus_tag="WHG62_001245"
     CDS             8917..>11170
                     /gene="clpA"
                     /locus_tag="WHG62_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ1725351.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDDEDGNDSDGLGREG
                     EEAEQKTGSLSDYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLVGEAG
                     VGKTALAEGLAHQIVNSDIPDALKDTEVYALDMGSLLAGTKYRGDFEARVKSVLKQLE
                     KIPQAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRTIFDK
                     DHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSARYINE
                     RFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETIIAKVARIPEKTVSHDDKQVL
                     QFLGRDLKNMVYGQENAIDALVAAVKMSRSGLGLPDKPIGSFLFSGPTGVGKTEVAKQ
                     LAYSMGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVLLLDE
                     IEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPGLGFTAKR
                     ERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPVIAKVVDKFLLQLEHQLLDKKVEAE
                     FTPALRKYLAEKGFDPQMGARPMNRLIQEKIRKPLADELLFGKLAEGGFVRIDWDAAK
                     EEAVLKFKKSK"
BASE COUNT         2665 a         3267 c         2814 g         2424 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgc
      361 accaagcgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatctcgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggt tttctgcccg gtgacctgac ccagaaagtc
      601 gatccctacc ttcgtccgct ttatgatgcc ctctatgacc tgatgggctt cgaccgtgtc
      661 accaagctga ttgaaaaagg tctgattgag attgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 ggcgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctttg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa atcgggcaga gaaaaacaga tacggaagcc aagctccgta
     1081 tccgtatccg tatccgtttc tttatccgtc caaccgatac atcaatcgaa ttttctgcat
     1141 cggattgcct catcttcgca aaacattgcc gaagtttcgc ggttgcacgc ctgacgcact
     1201 ttctgccgcg ccacgccttc attccgatcg cttgcctcaa acgtcttctg aaaaggcgta
     1261 acgctgcata catacatggt ggaatttgaa ccgaaaaggt cgattttgac ggtattgctg
     1321 ccgctttcca atacggcgac acggtgttcc aactgcgcca gacgtgcttc caaatcgccg
     1381 attctgtcgg caaatgcagg catggcggca cacgcggtca aaatgcccaa aatacatttt
     1441 ttcatcaatt tttccttgtt tcttgaaccc tacccacccg gacatccttt ttccgagagg
     1501 cagggtcaga ctttatttac ggggatgaat ccccttacaa atcaggataa tacatagaac
     1561 ggcactttat gcttcatccc atgtgttgaa acttcattgc tccttgtctg ttgaccctta
     1621 ttcccaatcc gttccctcaa ccttcggctt gggtttgcgc ctgcgacggc ggcgtttttt
     1681 cgcctgtcct tcgttttttt cgtgccgggc agcagcctcg tttttggtca tttccgtccg
     1741 ttgttcctgc gatgccgtct gaaacgccgt ccaccactcg gcaagggcgc ggtccgcatt
     1801 gccggtttcg gcgcgcaaga gcaggaaatc ataggcggca cggaaacgcg cctgtgcaaa
     1861 cagtttatgc ggacgtgcgc ctttgcggtt ctcaaactgc ggctgaaaca tccaaatttc
     1921 gcgcatcgtg gcggaaaagc gttgcggcac gccccaaccg cgttcgacgg tttcacgcat
     1981 cgtattgatt gcatcggaca gggcgggcgc aggtttcaaa ccctgttgca gattgctttt
     2041 ccaatggcgt tccaactcgg gccacatcag agccgccagt acaaaaccga ccgaaaccga
     2101 tttgtcagca cgcagccgct catcggtatt tttcagggca agcaccgtca tttttccggc
     2161 gatgccgtct gaaacgcgca aggcattgag cagcggatgg atgtcgtccg gtatgtcaaa
     2221 tccgttcaaa cgtttcagac actcgcgcgc gtgccctgaa aacagcagtt tcatgatttc
     2281 gtcaaacagc ctcgctaccg gttcgtgctt cagacggcat atcgattcgg caatcggtgc
     2341 ggtggtttct tccgacagct caaagcccaa tttgcccgac aggcggatgg cgcgcaaaat
     2401 cctgacaggg tcttcctgat agcgttcggc ggcatcgcca atcataacca gcctgcgggc
     2461 ggcaacatcg gcaatcccgt tgtggaaatc caaaatctct tctttttcag gatcgtaata
     2521 caaggcattg caggtaaaat cgcgccgcat cgcatcttct tcgatgctgc cgtaggtgtt
     2581 gtctttcatg attctgccgt gcgcgttctg atgaaccttc gcaccgccgc gaaacgtcgt
     2641 tacttcgata atctccgcac cgttcatcac atggacgatt tgaaaacgcc tgccgatgat
     2701 gcggctgcgg cggaagagtt tgtgcacctg ttcgggcgtg gcatcggttg cgacatcgaa
     2761 atctttgggt tcgatgccga gcagcagatc cctgaccgcg ccgccgacca cataagcctg
     2821 aaaccccgcc cctttcagac ggcgtatgac gttttcggcg gcaaagctca acatttcggc
     2881 acggatgttg tgtctttcgg caggaatgac cgttttactt tccgcttttt tactgctccg
     2941 accggaaggc agcatcttat tcaaccattt tttcagcata aatattctaa cccgaagagc
     3001 ggcatctcca cgggcaaccg tgttcagacg gcatcaggcg gtacgattcc gcaagatgcc
     3061 gtaaccataa acaaaaggcg tagaaactac gccgtccgaa tcacgccgcc ctcgcggcgg
     3121 cggcaacgcg ccattataac agattgccct ttaaaaaaat cagaccctgc ttttgtggcg
     3181 gagtctgaaa tttgatgcac cttatatatt gcgtccctaa gaagggatga ttaacaaaaa
     3241 ttaacgccct ttactttctt ttccgattgg gaacattccc gtcgtacaaa caggcaaatg
     3301 aaggaacaga aatcacattc aaacggcgtt ccgccgcctc tacaccgctt cccagtaatc
     3361 gatatacagc tgcaattcga gattgttgcg ccattcgttg gcaacggggc ggtaaaccgt
     3421 gcggatgtat tcggggatgt cttcgctgca acgccaaaac atcgcttcaa attcgcagcc
     3481 gtctttttgc agccagactt ttttgtgttt gccctccgcg cccaaaggtt gctggcggac
     3541 gacgtggaac tcgtcggtaa agctcggcgg cgcgaagccc tgcccccaaa cgtgacgggc
     3601 aaggttttgc gcctgttcca acgtgatgtc gcaggcgggc aggctgccgt cggtgatgaa
     3661 ggtttgcgac aaatcgtctt cgcacaccat ttcgcgcacg gcttcttcaa aggtcgtctg
     3721 aaacgcggga atgttgtgtt caagtatgct caaacccgcc gccatcgcgt gtccgccgaa
     3781 ttttaaaatc aaatcgggat ggcgtttgga caccaagtcc aaagcatcgc gcaagtgaag
     3841 attgggaatg gaacgccccg aaccgcgcac ttcaccgttg tcggcaggcg caaacacgat
     3901 ggtcggacga taaaaacggt ctttgaggcg gctggcaacg atgccgacca cgccttgatg
     3961 gaagtcgtcg cgatacgcca ccaaagtcat ctgacctgaa ggcagggttt caggaaaagc
     4021 attcagcgcg tcttgcagca tagactgctc gatttcgcga cgttcgatat tgaggttgtt
     4081 taactgcgcc gccagttcct gcgcctcggt atcatctcgc gccaacaggc aggcaatacc
     4141 gaccgacata tcgtccagcc gtccggcggc gttgatgcgc gggcccaacg caaaacccat
     4201 atcaaacggc tgcgccttgc gccaatcgcg ccgcgccact tcaaacaagg cgcggatacc
     4261 ggggcgcatt ttgccggagc gcatccgttt caaaccttgc gacacgagga tgcggttgtt
     4321 gtggtcgaga gggacgacat cggcaaccgt gccgagtgcg accaaatcca aaagttcgcc
     4381 cagattcggc tctttgatgc cgtctgaaaa ataattgcgg cggcgcaatt cggcacgcaa
     4441 agccatcaat acataaaaaa tcacgcccac gcccgccaag cttttgcttg gaaaaccgca
     4501 gcctttttgg ttcggattga cgatgatgca gtcgggcacg gtctcggcag gcagatggtg
     4561 gtcggtaacg atgacatcca aacccagagc ctgcgcgcgc gccacgcctg cgatgctggc
     4621 gataccgtta tcaaccgtaa tcagcaaatc cacaccttgc tctgccgcga tttcagccag
     4681 ctcgggcgtt aagccgtagc cgtgctcaaa gcggttgggc acaaggaaat ccactttcgc
     4741 ccccatcgcc gccaaaccgc tcataccgac ggaacacgcc gtcgcaccgt cggcatcata
     4801 gtcggcaaca atcaggattt tttccttgcg cccaaccgca tccgccaaac ggcgggcggc
     4861 ggcttcgcaa ttcgtcaacg attgataagg caggagggaa gcgagtttgt cgtccaattc
     4921 ggcaggactt tgcacaccgc gcgaagcaca aagctgggcg attaaaggat cggcaccggc
     4981 ggtgagcaaa tgattaaaaa cgtcggtatt gacggatcgg gtttggattt tggctgacat
     5041 gacgaggttt tttcaagata tgatgaggct gaaatgccgt ctgaaagctt ttcagacggc
     5101 attgctgttc atttgcgggc ggcatccacg accgcaccca gagccgccgc aggcaaagcc
     5161 agtaccgcgc ccgccgcatc cagtatcaaa aagggggggc gtatataaga tatttgcaaa
     5221 cagcttggat ttgtcggtat gtttttcagt aaccgtgtaa taaatatcgg caggcacact
     5281 ttgctcaaaa tgataatcgg cgttcagttt ttgcggcgtg gcgtagtatt tgcctttggc
     5341 ggatacgcag cgcgtgtaaa tagtccgatt gtcaagttcg accgcttcaa acccgagctg
     5401 tttcagcttg gcgatgtcgg caggcttgtc ggtatcgtag cgcaggcaaa ggccttcggt
     5461 actgaaattc tggctgccag gcgattcgag tttgaccggc agggcttggt ggcgagcata
     5521 gctcggggta tcctcaacta tttggaaggg tttgtccagc cctgccttca aaatgcccgt
     5581 cagcttcgcc gaatcttcgg gattgacgac gaaccagtat ttcccgccca tcatcaccag
     5641 actgcccttt tccaattggg cattgtcttt ggcaaccaca ccgaaggcgc ggatttgatc
     5701 cttgtcaacg tgtttatagg cggtcgtttg gctgaacggg tcgttcatgc cccacatcat
     5761 tgccgtacag ccgttcaaca tcaaggctgc cgccaaaacg gcggcggtcg ttttacggaa
     5821 caacatttta tcttccaatc agaatgacgg cggatgccgt ctgaaaatat gcctaggctt
     5881 cccctgttcc gccttggctt tccataacgg ttttcaactc ttgaaacagg gcgcggaaat
     5941 ttttcggcgg tttgttctgt tcctgttctt ttttggtatt gcggatgagc gtcctcagct
     6001 tgcccgcatc ggcgtttgga aaatcggaca taaactgcgt cagcgcgccg tcgtccgcca
     6061 gcagctccat ccgcgtccgc tccacacgtt gcaaaaaggc gttgtgcgcc gcatcgtcgc
     6121 cgcgcagctt ggcaagaaat gcctcgatgg gcgcgggatc ggtatcgcgc atcagtctgc
     6181 cgataaattg cgcctgccgc ttgagcgcgc cgttggatgt gattttttta taggtaacga
     6241 tggcttcgta caaatcttcg tccaagccga tttttttcaa cgtgtcgctt gagagcttgg
     6301 tcagctccat acccaaatcc tgcaaaccgt tcatctgctt tttcatttgg gttttgctga
     6361 cccattcgtc ttcttgttca aacatcttca ttctcaaatt ttatccgacg ggcgcatttt
     6421 aacagaatga ttccgcgttc agacggcatt ttgcaccgtc cgccctgcaa acggacgctt
     6481 ttgcccctgc cgcccgaaac ggttaaaatg ccgcaacgct ccaccaagaa agatttctat
     6541 gctgttcaac cacaccgctt ccgaacttct cgacctctgc cgccgcacgc tcgacttggc
     6601 aaaagcagcg ggcgcgaccg ccgccgaagc cgatttcagc gaatccatcg gacaaagcgt
     6661 cagcgtgcgg ctgggcgaaa tcgaacaaat cgagttccag caggacaagt cgctggacat
     6721 taccgtttac gtcggcaaac gcaaaggccg cgctggcacc gccgatttct ccgaacaagc
     6781 cctgcgcgac accgtccgcg ccgccgccga catcgcccgc cacaccgccg aagacggttg
     6841 cgccggactt gccgatgcct gtctgatggc aaaacacatc ggcgaccccg acctttacca
     6901 cgaatgggat ttggatacgg aagccgccgt cggcttggca aaacaatgcg aacaagccgc
     6961 cctgaacgag gatgagcgca tcgaaaactc cgaaggcgcg gcggtgcaaa ccggccatta
     7021 ccaatacgtt tacggcaaca cccacggttt tgccgcacac cggcaaggca cgcaccacag
     7081 catttcctgc agcgtcgttg ccgccgacga aaacggcatg cagcgcgact actggtacga
     7141 ttccgcctgc cgccatccgg atatggacag ccccgaaacc atcggtcaaa ccgccgcccg
     7201 ccgcactttg cgccgactcg gcagccgcag catcccgaca ggcagctacc ccgtcctctt
     7261 cgataccacc gtttcgggcg gtcttatcgg acacctcgtc ggcgcactct ccggcggcgc
     7321 gctctaccgc caaagcagtt tcctgatcga cagcatcggc aaaaaagtcc tgcccgattt
     7381 cctcaacctg cgcgaagaac cgcacatccc ccgctctttc cgcagcagct attttgatgc
     7441 ggaaggcgtt gccaccgcgc cgcgcttcgt gattcaaaac ggcattgtcg aaggctattt
     7501 cctcagcagt tacagcgcgc gcaaactcgg tatgcagacc acgggcaacg ccggcggcgc
     7561 gcacaacctg tatttgaacc atacgcacga aacgcaatcc gacctgctga aagaaatggg
     7621 gacgggattg ttggtaaccg aactgatggg acagggcgcg aacaccatta ccggtgacta
     7681 ctcgcgcggc gcggcgggtt tttgggtgga aaacggcgtg attgcctacc ccgtccacga
     7741 gattaccgta gccggacgct tgcaggatat gtaccgcgac attgtcggcg tggcggatga
     7801 cgctttgcgg cgttcgtcca acaaaatcgg ctcgattctg attgcgggga tgacggttgc
     7861 cggaagctga acgccctgcc gatgccgtct gaagacgaag gcagcacgtt ttgccccgtg
     7921 cctgcccgtt tgccgtttta tgccgcaccg ccttttgccg acaacattgc acattttttc
     7981 atcagcactg attttccctt atccgtcaaa atactaagcc acttgtccac aacagggtac
     8041 acacaagttc aggataaggc gtgcggggat tggggttttt ccgccgccgg caaaacggca
     8101 gacaaaaacg gcgggacatt gcctgtcccg ccgttttcaa atatacattt gaccgtacat
     8161 caggaattaa gcagcctgaa tgttggcggc ctgtttgcct ttagggccgg tggttacgtc
     8221 gaaagagaca cgttggcctt ctttcagggt tttgaaacct tccatattga ttgctgagaa
     8281 gtgagcgaac aaatcttcgc cgccttcatc aggcgtgatg aaaccaaaac ctttagcgtc
     8341 gttaaaccat tttacgatac cggttgccat tagaaacttc ctatactcaa aaattaacaa
     8401 aatcagcaaa acaaggcata cggcaaaccg agccgtctgg cgttccttcc agcttgatat
     8461 actcggcgga tgcccaatcc tgcttaaccg tctttttaca tttgttaaga caaaacgtca
     8521 agctatgttt tcaaaaaagt gggaaaatag gcaaaagtac cgaaaataca acaaaaatgc
     8581 cgtctgaacg cggctttcaa atgggacaca ctatgaccgc gcaacaccaa tccgacacgc
     8641 tcttgcaccg tctgaacacc ctgccgccga aacgttacgg cgttttccta ttgaacgacg
     8701 attacaccac gatggaattt gtcgttgaaa tcctgaccga aatcttcatg ctcggacaag
     8761 aacaggcggt agcggtaatg ctcttggttc atcacgaagg caaaggcctg tgcggcactt
     8821 acacgcgcga tattgcccaa accaaacagc aacaagtcat gcagcgggca aaagccgaag
     8881 ggcatccgct gcaatgtatt gtcgaggaga tttaatatgc ttgcacccga attggaacag
     8941 attttgcagc agctttaccg cgaggcgcgt aaggctcatt atgaatttat cagcctcgag
     9001 catctgcttt tggtactcat cgaagaagat gcctccgtgc cgaacgtctt aaaactatgc
     9061 ggcgcggatt tgaaagtggt gtccgaacag ctcgccgcca gcgttgccga aaacaccccc
     9121 ctgattcccg aacacctttt agacacggtc gaaacacggc ccacgctcgg cttccaacgc
     9181 gtgatgcaac gggcgatggt gcatacccag tctgccggaa aagccgcagt cgaaccgttg
     9241 gacgttttgg tcgcgctgat gagcgaaacc gacagccaca ccgtctattt cctcaagctg
     9301 caatcggtta cgcgttttga agttttgcgc tgtattgccc acggctcgcc cgatgacgag
     9361 gatggcaatg attcagacgg cctgggacgc gagggcgaag aagcggaaca aaaaaccggc
     9421 tccctttccg actacaccgt caacctcaac gccgaagtca aagccggccg tatcgaccct
     9481 ttgattggtc gcaaacacga aatggaacgg ctggtgcaaa tcctgtgccg ccgccgcaaa
     9541 aacaatccgc ttttggtcgg cgaagcaggt gtgggcaaaa ccgcgctggc ggaaggtttg
     9601 gcacatcaaa tcgtcaacag cgacattccc gacgcgctca aagataccga agtgtacgcg
     9661 ctggatatgg gttcgctgtt ggcgggcacg aaataccgcg gcgactttga agcgcgggtc
     9721 aaatccgtct tgaaacagct cgaaaaaatc ccgcaagcca ttttgtttat cgacgaaatc
     9781 cacaccatca tcggcgcggg cagcaccagc ggcggcacca tggacgcgtc caacctgctc
     9841 aaacccgcgc tggcaaaagg ttcgctgcgc tgcatcggcg caaccaccta cgacgaatac
     9901 cgcaccattt tcgacaaaga ccatgcctta agccgccgct tccaaaaaat cgacgtggtc
     9961 gaacccaccg tttccgaaac cgtacaaatc ctgcgcggct tgaagccgat gtttgaagcc
    10021 ttccaccaag tccgctatac gcaaggcgca ctcgaagccg ccgccgaact ctccgcacgc
    10081 tacatcaacg agcgtttcct gcccgacaaa gccatcgacg tgatggacga agcaggcgcg
    10141 gcgcaacgga ttctgcccaa atccaaacag aaaaaagtca tcggcaaagc gcaaatcgaa
    10201 accatcatcg ccaaagtcgc gcggattcca gaaaaaaccg tgtcgcacga cgacaaacag
    10261 gtgctgcaat tcctcggccg cgatttgaaa aacatggttt acggtcaaga aaacgccatc
    10321 gacgcgctgg ttgccgccgt caaaatgtcg cgttcgggct tgggactgcc cgacaaaccg
    10381 ataggcagct tcctcttctc cggtccgacc ggcgtcggta aaaccgaagt cgccaaacaa
    10441 cttgcctact cgatgggcgt accgctgcaa cgctttgata tgtccgaata catggaacgc
    10501 catgccgtat cgcgcctcat cggcgcgcct ccgggctatg tcggctttga acaaggcggc
    10561 cttttaaccg aagccgtcaa caaacagccg cactgcgtat tgctcttgga cgaaatcgaa
    10621 aaagcccacc ccgacatttt caacgtcctc ctgcaagtca tggacgcagg caaactgacc
    10681 gacaacaacg gcaagagtgc cgatttccgc aacgtcatcc tgattatgac caccaacgca
    10741 ggcgcggaaa gcctcagccg ccccggccta ggctttaccg ctaagcgcga acgcggcgac
    10801 gaaatgcagg ccatcaacaa gctcttcacg cccgaattcc gcaaccgctt ggatgcgatt
    10861 atcccgtttg cacccctgtc cgaacccgtc atcgccaaag tcgtggacaa attcctgctc
    10921 cagctcgaac accagcttct cgacaaaaaa gtcgaagccg aattcacgcc cgcattgcgc
    10981 aaatatctgg cggaaaaagg tttcgacccg caaatgggag cgcgcccaat gaaccgcctg
    11041 attcaggaaa aaatccgcaa accactcgcc gacgaactcc tgttcggcaa actcgccgaa
    11101 ggcggctttg tgcggataga ctgggatgcg gcaaaagaag aagccgtgtt gaaatttaag
    11161 aaaagcaagg
//
LOCUS       DAWGBY010000056        11078 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.056, whole genome shotgun sequence.
ACCESSION   DAWGBY010000056 DAWGBY010000000
VERSION     DAWGBY010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11078
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.056"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="WHG62_001246"
     CDS             complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="WHG62_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ1725352.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     VSEEMPVQEVLLDELPSEEPAKSVQAKTAADILAERMKNLPHEPRHTAGSASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1912..2046
                     /gene="rpmH"
                     /locus_tag="WHG62_001247"
     CDS             1912..2046
                     /gene="rpmH"
                     /locus_tag="WHG62_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ1725353.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2049..2414
                     /locus_tag="WHG62_001248"
     CDS             2049..2414
                     /locus_tag="WHG62_001248"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ1725354.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2480..2707
                     /gene="yidD"
                     /locus_tag="WHG62_001249"
     CDS             2480..2707
                     /gene="yidD"
                     /locus_tag="WHG62_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ1725355.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHGHDPVP"
     gene            2879..4516
                     /gene="yidC"
                     /locus_tag="WHG62_001250"
     CDS             2879..4516
                     /gene="yidC"
                     /locus_tag="WHG62_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ1725356.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKIYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCVAGDCSIDI
                     KRRNDKLYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4597..5310)
                     /locus_tag="WHG62_001251"
     CDS             complement(4597..5310)
                     /locus_tag="WHG62_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ1725357.1"
                     /translation="MVSPVLYLIPTPLGTPDTPCLLPHDQRAVVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHSETRLCTATDLTLPTQEIISQTVVQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(5369..5959)
                     /gene="maf"
                     /locus_tag="WHG62_001252"
     CDS             complement(5369..5959)
                     /gene="maf"
                     /locus_tag="WHG62_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ1725358.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPEALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEGL
                     GALLIERIESSDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            6107..6610
                     /locus_tag="WHG62_001253"
     CDS             6107..6610
                     /locus_tag="WHG62_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ1725359.1"
                     /translation="MSDPNLIDPEVFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNIKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGSNGTPEKADRDKPNPFAV
                     LAGLKSN"
     gene            6644..6823
                     /gene="rpmF"
                     /locus_tag="WHG62_001254"
     CDS             6644..6823
                     /gene="rpmF"
                     /locus_tag="WHG62_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ1725360.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            6998..7525
                     /locus_tag="WHG62_001255"
     CDS             6998..7525
                     /locus_tag="WHG62_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ1725361.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLKELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVDDWWINYPWDA
                     HDIDEHNRLAESSRG"
     gene            7615..8670
                     /gene="plsX"
                     /locus_tag="WHG62_001256"
     CDS             7615..8670
                     /gene="plsX"
                     /locus_tag="WHG62_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ1725362.1"
                     /translation="MITLAVDAMGGDQGLTVTVPGATAFLQAHPDVRLIMTGDEAQLR
                     QALNAAGAPMERIDICHTTQVVGMDEAPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            8806..9057
                     /locus_tag="WHG62_001257"
     CDS             8806..9057
                     /locus_tag="WHG62_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ1725363.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            9084..9500
                     /locus_tag="WHG62_001258"
     CDS             9084..9500
                     /locus_tag="WHG62_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725364.1"
                     /translation="MKTSTVVFGGFFMADNGERIQIPVLENPDIREINHFFSVSNFEK
                     KAGVLVFRIIPEPEFGHTELTVYFEKGYYLPMIQTILEDGDIEVKNLKTENYSGKARE
                     ILGDSYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            9520..9723
                     /locus_tag="WHG62_001259"
     CDS             9520..9723
                     /locus_tag="WHG62_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725365.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPVHGNLHLKTICIPNHTPI
                     PVSVICTLSVLGNHRFFAYNSRI"
     gene            9750..10712
                     /locus_tag="WHG62_001260"
     CDS             9750..10712
                     /locus_tag="WHG62_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ1725366.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDATGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10759..>11078
                     /locus_tag="WHG62_001261"
     CDS             10759..>11078
                     /locus_tag="WHG62_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEZ1725367.1"
                     /translation="MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLIL"
BASE COUNT         2855 a         3298 c         2576 g         2349 t
ORIGIN      
        1 ttaatccgct atatctttac ccttcggacg gcatgggcaa tatcatgtcg tctgaaaacg
       61 ttttccatca gttttgaatc agaatcagca gcttttcata atcctgagcc aattccggat
      121 cttcttcgcg cagtttcgcc actgccctga tgccgtgcat aacggtcgta tggtcgcgcc
      181 cgccgaacga atcgccgata gacggcaggc tcaaagtggt cagttctttg gtcaggctca
      241 tggcaacctg acgcggacgg gcaatgttgc gcgtgcgttt tttgccgagt acgtcgctga
      301 ttttgatgcg gtaatatttc gcaacggcat caataataat atcggcggta atgactttgt
      361 gcttctcggc aataatgtcc tgcaaagcgg tacgcgccaa atcgatgtcg atgacgggac
      421 ggttcataaa gcggctgctc gctccgacgc ggttgaacgc gccttcaagc tcacgcacgt
      481 tggaacggat cagattggca atgaacagcg cggcttcgtc ttcaatactg atgcccgccg
      541 cttccgcctt tttctgcaaa atggcgatac gcatttccaa ttcgggcggc tcgagttcca
      601 aagtcagtcc ccatgaaaaa cgggatttga ggcggtcgtc cataccttcg attttggcgg
      661 gtaaaacatc gcaagtgagg atgagctgtt ttttctcgtt atggaaatga ttgtacagat
      721 agaagaattc ctccatcgta cggtctttgc ctttgatgaa ctggatgtcg tcgataatca
      781 gcaggtcgta ttgcttgtat tgctgcttga acacgtcgta ggtattgttg cgaaccgcct
      841 tcataaagct gcggatatag tcgtccgaat gcatatagcg cactttggca tcgggacggt
      901 ttttcaacag ttcgttgccg accgcctgca caaggtgggt tttacccaaa cccgtactgc
      961 catagaggaa gaacgggtta taactctgtc ccggactttc cgcaatcgcc tgcgcggcag
     1021 ctgccgcaag gcggttgccc ttgccttcta ccaacgtatc aaatgtgtaa tccggagaca
     1081 ggttggtttg ttcgtaacgc gcctcttccg catcacgctg cgcatccgtc cgcgctttcg
     1141 caagtacctc cgattccgga cgggaagcag acccggcagt atggcgcggc tcatgcggga
     1201 ggtttttcat acgttccgcc aaaatatccg ccgccgtttt cgcctgtacg gatttggcag
     1261 gctcttcaga cggcagctcg tccaacagaa cctcctgcac gggcatttcc tccgacaccg
     1321 cgtgcaagga cggctcggca ggttcgacag caccttcaac cgccgccatc tcataacgca
     1381 cgccttctcc cggtttgaat acgaaggcgg aacggccggc agccaactct tccctcaccg
     1441 cttctatttt tccggcaaac tggctcttga gcatattgca ggcaaactgg ttcttgccgt
     1501 acaccaccca tacgccaccc tcctcaccga cggtaagggg cgcaatccat tgcgcaaact
     1561 gcccttgagg caacatatcg tgaagacggc ggaggcacag cggccaaaac tctgctaatg
     1621 tcatggatag gctcgaatcg gtaaaaatga aatcgaaaac aaagaaaata taatattttc
     1681 aaaaagaaaa caaatctgtt gaacgcacat cggttcaaaa cgcgactgcc cgattatacc
     1741 gactcacgaa tattttatcc acaacccgtg caaaaattta tccacagaaa ggcggcggaa
     1801 atccgcaggc aatcgggcaa tcttcctgca aagtttctat attgattgac aaaagcggca
     1861 aattggagtg taattcacgg tttatctatc taccgatttt taggaaacat catgaaacgc
     1921 acttatcaac cttccgttac caaacgcaaa cgcacccacg gcttcctggt gcgctccaaa
     1981 acacgcggcg gccgcgcagt attggccgca cgccgtgcca aaggccgcaa acgcctggcg
     2041 gtataatttt ggactaccgc ttcggaaggc agtaccgctt gttaaaaacg gatgattttt
     2101 catccgtttt tgcattcaga aaccgccgca gccgcgacct gctgcaagtt tcgcgttcaa
     2161 acggcaacgg gctggaccat ccccgcatcg gtctggtggt cggcaaaaaa accgccaaac
     2221 gcgccaacga acgaaattat atgaagcgcg tcatccgcga ctggttcaga ttgaacaaaa
     2281 accggctgcc gccgcaggat ttcgtcgtgc gcgtccgccg taaattcgac agggctaccg
     2341 caaaacaggc aagggcggaa ctggcacaac tcatgttcgg caaccccgca accggatgca
     2401 ggaaacaggc atgatcagaa cggtactctg caggcaaggt tcagacggca acgggtttcc
     2461 catactaagg aacatcccga tgaacttcct attgtccaaa ctcctgctgg gactgatacg
     2521 gttctaccaa tattgcatca gcccgctgat tccgccgcgc tgccgttata cgccgacctg
     2581 ttcgcaatac gcggtcgaag cggtcaaaaa atacggcgca ttcaaaggcg gccggctcgc
     2641 catcaagcgc attgcacgct gccacccttt cggcggacac ggacacggac acgaccccgt
     2701 cccctgaacc gccccgccgc ccgaactgca cgctttcctt ttatttccca tcggtttcta
     2761 tataatgccg tctgaaactt cgggctggcg gcacgaccgt cgggtatgaa gcccgccctt
     2821 attccccgtc tatcggaaca cgcaacctgc ggcatttccg accattcagg aaactcttat
     2881 ggattttaaa agactcacgg cgtttttcgc catcgcactg gtgattatga tcggatggga
     2941 aaagatgttc cccactccga agcccgtccc cgcgccccaa caggcagcac aacaacaggc
     3001 cgtaaccgct tccgccgaag ccgcgctcgc gcccgcaacg ccgattaccg taacgaccga
     3061 cacggttcaa gccgtcattg atgaaaaaag cggcgacctg cgccggctga ccctgctcaa
     3121 atacaaagca accggcgacg aaaataaacc gttcatcctg tttggcgacg gcaaagaata
     3181 cacctacgtc gcccaatccg aacttttgga cgcgcagggc aacaacattc taaaaggcat
     3241 cggctttagc gcaccgaaaa aacagtacag cttggaaggc gacaaagttg aagtccgcct
     3301 gagcgcgcct gaaacacgcg gtctgaaaat cgacaaaatt tatactttca ccaaaggcag
     3361 ctatctggtc aacgtccgct tcgacatcgc caacggcagc ggtcaaaccg ccaacctgag
     3421 cgcggactac cgcatcgtcc gcgaccacag cgaacccgag ggtcaaggtt actttaccca
     3481 ctcttacgtc ggtcctgttg tttatacccc tgaaggcaac ttccaaaaag tcagcttctc
     3541 cgacttggac gacgatgcca aatccggcaa atccgaggcc gaatacatcc gcaaaacccc
     3601 gaccggctgg ctcggtatga tcgaacacca ctttatgtcc gcttggattt tgcaacccaa
     3661 aggcggacaa agcgtttgcg tcgctggcga ctgcagcatc gacatcaaac gccgcaacga
     3721 caagctgtac agcgcaagcg tcagcgttcc ccttgccgcc atcccggccg gcgcgaaagc
     3781 cgaaaccgcc gtcaacctgt atgccggccc gcaaaccact tccgtcatcg caaacatcgc
     3841 cgacaacctg caactggcca aagactacgg caaagtacac tggttcgcct cccccctctt
     3901 ttggcttttg aaccaactgc acaacatcat cggcaactgg ggctgggcga ttatcgtttt
     3961 aaccatcatc gtcaaagccg tactgtatcc attgaccaac gcctcttacc gctctatggc
     4021 gaaaatgcgt gccgccgcac ccaaactgca agccatcaaa gagaaatacg gcgacgaccg
     4081 tatggcgcaa caacaggcga tgatgcagct ttacacagac gagaaaatca acccgctggg
     4141 cggctgcctg cctatgctgt tgcaaatccc cgtcttcatc ggattgtatt gggcattgtt
     4201 cgcctccgta gaattgcgcc aggcaccttg gctgggttgg attaccgacc tcagccgcgc
     4261 cgacccctac tacatcctgc ccatcattat ggcggcaacg atgttcgccc aaacttatct
     4321 gaacccgccg ccgaccgacc cgatgcaggc gaaaatgatg aaaatcatgc cgttggtttt
     4381 ctccgtcatg ttcttcttct tccctgccgg tctggtattg tactgggtag tcaacaacct
     4441 cctgaccatc gcccagcaat ggcacatcaa ccgcagcatc gaaaaacaac gcgcccaagg
     4501 cgaagtcgtt tcctaaatgc cgcagcatga aaaatgccgt ctgaaacctg ttcagacggc
     4561 atttttattg ttcaccccct atcggggcgg aaatcttcaa cctgcataca tcacaaaaat
     4621 cgtcgggcgt tttttcagat tgggcatttc ttttcttttt cgccactgca caaccgtctg
     4681 gctgatgatt tcctgagtcg gcaacgtcaa atccgtagcc gtacacaaac gcgtttcaga
     4741 atgcaggttt tccaccgcat ccgccaacaa cacatcgttg cgatacggcg tttcgataaa
     4801 cagctgcgtt tcattctgct ggcgcgaacg ttgttccaaa gccttcaaac tctgaatccg
     4861 ctcatttttt tcagacggca aataaccctt aaacgcaaag ttctgcccat tcgcacccga
     4921 agccatcagc gccagcaaca agctggacgg accgaccaaa ggccgtactt caaaaccgtg
     4981 tttatgcgcc aatgccacca aattcgcacc cggatcggca acagccgggc aacccgcctc
     5041 gctgacaatg cccatactgc gcccttcttg caaaggtttc agcaattccg gcaaagtctt
     5101 caaatccgtg tgttcgttca gcgtttgcaa attcagttcg cggataggca ttgtcacgcc
     5161 caaatgtttc aaatgcgcgc gcgccgtttt ttccgcttcc acgacaaaat ccgtcagccc
     5221 gacaaccgcc cgttgatcat gcggcaacag gcacggcgta tcgggcgtac ccaaaggcgt
     5281 aggaatcaaa tacaaaacag gagacaccat tccctcactc atcagttaaa aatgccgtct
     5341 gagcctttca gacggcataa acgggcagtt acagaacctc cacgccctca tttttcaaga
     5401 aatcgaccag acggaaaacc ggcaaaccga ttaaagcatt cggatcgctg ctttcaatcc
     5461 gttcgatcag cagcgcgccc aagccctcgc tcttcaacgc acacgagcaa taaaccgcat
     5521 caggctcgcg ctccaaatag cggaggatgt gcagctcgtc caacttcctc atcacgacca
     5581 ccgtcttatc gatatgccgc tgcatcctgc ccgtaaccgt atttagcaga acgaccgcgc
     5641 tgtaaaactc aatctccctg ccgctcaaat gcatcaacat cttttgcgca ttagcaaggt
     5701 tcatcggctt gccccactgc ctgccgtcgc accacgccac ctggtccgca ccgacaatca
     5761 acgcctctgg gaaacgcccg gtcaacgacc gcgccttacc ctcggcaagg cgcaatgccg
     5821 tctgaggggc ggattccccc aacatcggcg tttcgtcaaa atcgggggac gccgcctgaa
     5881 aggcaatgcc gagcctttcc atctgttcgc ggcggaaaac cgaactcgta cccaaaatca
     5941 aaggcagttc caaacccatc ccatcctcct taccgttgaa aacacgcccg aaggggcggt
     6001 aaaatccagc catgcgccga aacacgggta cccgccttcg gcgtaccgca acatttttct
     6061 taaaaatatt gacgttagaa catctaaatt atatcatatc tcgtttatgt cagaccctaa
     6121 tttgattgac ccagaagttt tcgccgccga agggcagaac ctgcaaggca gttttctgct
     6181 ggaagaattg gatgaacgcg tcagttcgca cgattatccc gccgacaggc agaccaaaat
     6241 atcgtttaca ctgaccggcg gtcgcgaccg gctgcaacgc ctgttcctcg acctgaacat
     6301 caaagccgat atgcccctga tttgccagag atgtatcaaa cccatgccgt tcatgcttga
     6361 tgaaagcagc cgtatcgtcc tgttttccaa cgaagagtcc ttggacgaat ccatgcttgc
     6421 cgacgaagaa ctcgaaggca tactgattga aaaagaactc gacgtgcgca cattggtaga
     6481 agaccaaatc ctgatgtcgc tccccttctc tccccggcac gaagactgcg gcagcaacgg
     6541 gacaccggaa aaagccgatc gggacaaacc aaaccccttc gccgttttgg caggtttgaa
     6601 aagcaattga ttaggacaca gtttatttat ccaggagctt gaaatggccg ttcaacaaaa
     6661 caaaaaatcc ccttccaaac gcggtatgca ccgttcgcac gacgcgctga ccgcgcccgc
     6721 actgtctgtc gacagcacaa ccggcgaagt acaccgcccg caccacattt cccccaacgg
     6781 tatgtaccgc ggccgcaaag tggtcaaagc caaaggcgaa taatccctat tcgactgact
     6841 gaaaaagcca gaacattgcc atgcaattac tggctttttt tgcattggac gcaccatccg
     6901 tccaaacttt cgccatacgt caacacacag gggcaaagcg ttccgtataa taacccgtga
     6961 aaatattcca aaagccccaa ccaccaagga aattccgatg aaacagaaaa tctggtacac
     7021 ctacgatgac atccaccgcg tcatcaaagc attggcagaa aaaatccgga acgccgacat
     7081 caaatacgat gccatgattg ccatcggcgg cggcggcttt attccggcac gtatgctgcg
     7141 ctgttttctg gaaattccga tttatgccgt aaccaccgcc tattacgaca gcgacaacga
     7201 aggacaggtt accgaagaag tcaaaaaagt ccaatggctc gaccccgttc ccgaagccct
     7261 gcggggcaaa aacgtactcg tcgtcgacga agtggacgac agccgcgtaa ccatggagtt
     7321 ctgcctgaaa gaactgctca aggaagactt cggtacgatc ggcgtcgccg tcctgcacga
     7381 aaaaatcaaa gccaaagcag gcaaaatccc cgaaggcatt ccctatttca gcggcatcac
     7441 cgtagacgac tggtggatta actatccgtg ggatgcacac gatatcgacg aacacaaccg
     7501 tcttgccgaa agcagccgag gctgaccctt tcagacggca tattttccga accgatgccg
     7561 tctgaagccc gcacgacccc tgccgcagac cgaaaaccca ccggagaaac ccctatgatt
     7621 acgttggccg tagatgccat gggcggcgac caaggactta ccgttaccgt acccggcgca
     7681 accgcattcc tccaagcaca ccccgatgtc cgcctgatta tgaccggcga cgaagcacag
     7741 ctccgccaag ccctgaacgc agcaggcgcg ccgatggaac gcatcgacat ctgccatacc
     7801 acccaagttg tcggcatgga cgaagccccg caatccgccc tgaaaaacaa aaaagactcc
     7861 tccatgcgcg tcgccatcaa ccaggttaaa gaaggcaaag cccaagccgc cgtatccgca
     7921 ggcaacacgg gcgcgctcat ggcaaccgca cgtttcgtcc tcaaaaccat tcccggcatc
     7981 gaacgccccg ccatcgccaa attccttcct tccgacaccg accacgttac cctcgccctc
     8041 gacctcggcg caaacgtcga ctgcacgccc gaacagctcg cccaatttgc cgttatcggc
     8101 agcgaactcg tccacgcact ccatcctcaa aaaggacagc cgcgtgtcgg gctggtcaac
     8161 gtcggcacgg aagacatcaa aggtacggac accgtcaaac aaacctacaa actgctgcaa
     8221 aacagcaaac tcaactttat cggcaacatc gaaagcaacg gcatcctgta cggcgaagca
     8281 gatgtcgtcg tcgccgacgg ctttgtcggc aacgtcatgc tcaaaaccat cgaaggcgcg
     8341 gtcaaattca tgagcggagc catccgccgc gaattccaaa gcaacctgtt caacaaactt
     8401 gccgccgttg ccgccctacc cgccctcaaa gggctgaaaa acaaactcga tccgcgcaaa
     8461 ttcaacgggg ccatcctgct cgggctgcgc ggcatcgtca tcaaaagcca cggcggcaca
     8521 gacgaaaccg gtttccgcta cgcactcgaa gaagcctacc acgaagccaa gtccgccggc
     8581 ctttccaaaa tcgaacaagg cgttgccgaa caactcgccg cactcgaaac tgccaaagcc
     8641 gtccaaaacg aaaatgtcgg cggtctgtaa cacacacgat gccgtctgaa cgcccccgcc
     8701 cctttcagac ggcatccgcc cgcaccaaac ctgcgggcgc ggacggcgat gcgcctgtcc
     8761 ggcacttccc aaatacttcc ctgtaaaata aggaatattt gaaaaatgaa gacattagaa
     8821 aaacggatga aagctctaga caaacggatg atgaagttcg gaaaatccct tgaaggcagg
     8881 cttgatgccc gtctgattga atccgcattg gattatattc attattcgga acgttttttg
     8941 gcttttgaaa tcctgtgtac ttatatcgaa gatttcgatg tccggctgac ggaacaagaa
     9001 tcccgggaaa tttcttttat caacaaggaa tttgagatag aaagcacgtc cgattaacca
     9061 ataaagccaa tgggttgata aacatgaaaa catcgacggt cgtttttggc ggatttttta
     9121 tggcagacaa cggagagcga atccaaatcc ccgttttgga aaatcctgac attagggaaa
     9181 tcaatcactt tttttccgta tcaaattttg agaaaaaagc cggcgtcctt gttttcagaa
     9241 tcatccccga gccggaattt ggccataccg aattaactgt ctattttgaa aaaggatatt
     9301 atttgccaat gattcaaaca attttagaag acggggatat tgaagtcaaa aaccttaaaa
     9361 cagaaaatta cagcgggaag gcaagggaaa tcttgggaga ttcctaccct attgagcata
     9421 tctctaaaaa tatttctaca attcaaaata taatttctga atttatgata caaaaacaaa
     9481 caccggcacc aataatttga tggaaaacca acaatcaaaa tgccgtctga agcatgtttg
     9541 gttttcagac ggcatttcct tcgcttaaaa cagcgtatcg gcaaccccgc cctgcctgtc
     9601 cacggcaatc tgcatctgaa aaccatctgt atcccaaacc acacccccat ccctgtttcc
     9661 gtcatttgca ccctgtccgt attgggcaat catcggtttt tcgcttacaa tagccgaatc
     9721 tgaaccaact ctctaaaaag gccgttccca tgcagtatgc aaaaatttcc ggcacgggca
     9781 gctatcttcc cgccaaccgc gtcagcaatg acgaccttgc ccaaaaggta gatacctctg
     9841 acgagtggat taccgcgcgt acgggcatca agttccgcca tattgcagcc gaaaatgaga
     9901 aaaccagcga tcttgccgcc gaagcagccc gccgcgcact ggatgcaacc ggattagaca
     9961 gcggcgaaat cgatttaatt attgtggcga cggcaacgcc agatatgcag tttccttcta
    10021 ccgccaccat cgtccaacaa aaattgggca tcaccaacgg ctgccccgcg tttgacgtac
    10081 aggcggtgtg tgcgggcttt atgtacgcgc tgaccacggc aaacgcctac attaaaagtg
    10141 gcatggcgaa aaacgcgctg gtcatcggcg cggaaacctt cagccgcatc gtcgattgga
    10201 acgaccgcac aacctgcgta ttgttcggcg acggcgcggg cgcggtggtt ttgagcgcgg
    10261 cagacaaacc gggcatcatc cacagcaaac tcaaagccga cggcaattat ctgaaactct
    10321 taaacgtccc cgggcaaatc gcctgcggca aagtttccgg ttcgccgtac atttcgatgg
    10381 acggtcccgg cgtgttcaag tttgccgtca aaatgctgtc caaaatcgcc gatgacgtta
    10441 tcgaagaagc aggttacacc gccgctcaaa tcgactggat cgtgccgcat caggcaaacc
    10501 gccgcattat cgaatcgacc gcgaaacatt taggtttgag tatggacaaa gtcgtcctga
    10561 ccgtccaaga ccacggcaac acgtccgccg cctcgattcc gctggctttg gatacaggca
    10621 tccgcagcgg acaaatcaaa cgcggtcaaa acctgctgct cgaaggcatc ggcggtggtt
    10681 tcgcgtgggg cgcggtgctg ttgcaatatt gaacccgatg ccgtctgaag caggttttca
    10741 gacggcattt cccatatcat gaagcggcag gctttcttca aactgatggc gtgtgcggca
    10801 tttctgtctg ccgtttcgct gcgcctcccc gtattgggcg cgtgttacgc aatattgtcc
    10861 ctctatgcgt ttgcacttta cggcatcgac aaacggcgtg ccgtgcgggg aaaacgccgc
    10921 attcccgaac accgcctgct gctgcctgcc ttgttcggcg gttgggcggg cgcatacttg
    10981 ggcagcagga tattcaggca taaaacggcg aaaaagcgtt ttgttgtgct gttccgtctg
    11041 actgtttcgg gcaatgtcct ggcgaccctc atcctgat
//
LOCUS       DAWGBY010000057        11071 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.057, whole genome shotgun sequence.
ACCESSION   DAWGBY010000057 DAWGBY010000000
VERSION     DAWGBY010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11071
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.057"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     regulatory      64..167
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            234..1460
                     /gene="cytX"
                     /locus_tag="WHG62_001262"
     CDS             234..1460
                     /gene="cytX"
                     /locus_tag="WHG62_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ1725368.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSVEVFASSGTNAAPAVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATL
                     TATLTYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDA
                     YSAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLI
                     ADFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPIMSAVAIATVL
                     VRLFFKKTQSLQRNPS"
     gene            1457..2557
                     /locus_tag="WHG62_001263"
     CDS             1457..2557
                     /locus_tag="WHG62_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ1725369.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGTRQGEHAVAYV
                     AAAMLAPAAEAVEATPEVIRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWHADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECVPEGLQAQYDWLIDCRGYGAKTVWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSRKRRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            2578..3195
                     /gene="thiE"
                     /locus_tag="WHG62_001264"
     CDS             2578..3195
                     /gene="thiE"
                     /locus_tag="WHG62_001264"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ1725370.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKALHGDE
                     LKREIARCVAACQGSRTQLFINDHWHEAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNAQAVLATGVSSLAVVRAVTEAENPEAVVKAFQALWDG"
     gene            3617..3811
                     /gene="thiS"
                     /locus_tag="WHG62_001265"
     CDS             3617..3811
                     /gene="thiS"
                     /locus_tag="WHG62_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEZ1725371.1"
                     /translation="MNIILNGEPAELHGTSVADLIAQTAPQKPFAVAVNTVFVPKGAY
                     AETVLNENDKIDIVRPVVGG"
     gene            4025..4813
                     /locus_tag="WHG62_001266"
     CDS             4025..4813
                     /locus_tag="WHG62_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ1725372.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     AGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(5576..6400)
                     /locus_tag="WHG62_001267"
     CDS             complement(5576..6400)
                     /locus_tag="WHG62_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ1725373.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAQAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADAEEIRKITSLYGKLNLKSCK"
     gene            complement(6513..8291)
                     /locus_tag="WHG62_001268"
     CDS             complement(6513..8291)
                     /locus_tag="WHG62_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ1725374.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            complement(8288..8794)
                     /gene="rfaE2"
                     /locus_tag="WHG62_001269"
     CDS             complement(8288..8794)
                     /gene="rfaE2"
                     /locus_tag="WHG62_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HEZ1725375.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGDALVLALNTDASVRRLGKGGDRPVNPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            complement(8930..9005)
                     /locus_tag="WHG62_001270"
     tRNA            complement(8930..9005)
                     /locus_tag="WHG62_001270"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8970..8972),aa:His,seq:gtg)
     gene            complement(9033..9109)
                     /locus_tag="WHG62_001271"
     tRNA            complement(9033..9109)
                     /locus_tag="WHG62_001271"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9073..9075),aa:Arg,seq:tct)
     gene            complement(9134..9211)
                     /locus_tag="WHG62_001272"
     tRNA            complement(9134..9211)
                     /locus_tag="WHG62_001272"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9174..9176),aa:Pro,seq:tgg)
     gene            9434..10288
                     /gene="folD"
                     /locus_tag="WHG62_001273"
     CDS             9434..10288
                     /gene="folD"
                     /locus_tag="WHG62_001273"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ1725376.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQNNLHTPCLAVVLVGGD
                     PASAVYVRNKKTSCQKCGIKSLSYELPESTSQEELLALVDRLNVDSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            complement(10350..10931)
                     /locus_tag="WHG62_001274"
     CDS             complement(10350..10931)
                     /locus_tag="WHG62_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ1725377.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
BASE COUNT         2470 a         3332 c         2919 g         2350 t
ORIGIN      
        1 atgcgccgtg ccgccgaaaa tgtaagaatt ttgccaacgc acgttgcttt gtgtaaactt
       61 aaagctttct tgtcggagtg ccgccgccgg gcggctgaga ttgcgaaagc agaatccgta
      121 gaacctgtcg gggtaatgcc tgcgtaggaa acaaaccgtc aaatgcctta tcgggcttcc
      181 gttccctttt ccgcacttcc ccgcccacct tccttctttt taaaggacgt catatgtcgg
      241 gcaatgcctc ctctccttca tcttccgccg ccatcgggct gatttggttc ggcgcggcgg
      301 tatcgattgc cgaaatcagc acgggtacgc tgcttgcgcc tttgggctgg caacgcggtc
      361 tggcggctct gcttttgggt catgccgtcg gcggcgcgct gttttttgcg gcggcgtata
      421 tcggcgcact gaccggacgc agctcgatgg aaagcgtgcg cctgtcgttc ggcaaacgcg
      481 gttcagtgct gttttccgtg gcgaatatgc tgcaactggc cggctggacg gcggtgatga
      541 tttacgccgg cgcaacggtc agctccgctt tgggcaaagt gttgtgggac ggcgaatctt
      601 ttgtctggtg ggcattggca aacggcgcgc tgattgtgct gtggctggtt ttcggcgcac
      661 gcaaaacagg cgggctgaaa accgtttcga tgctgctgat gctgcttgcc gtgttgtggt
      721 tgagcgtcga agtgttcgct tcgtccggca caaacgcagc ccccgccgtt tcagacggca
      781 tgagtttcgg aacggcagtc gagctgtccg ccgtgatgcc gctttcctgg ctgccgcttg
      841 ccgccgacta cacgcgccac gcgcgccgtc cgtttgcggc aaccctgacg gcaacgctta
      901 cctacacgct gacgggctgc tggatgtatg ccttgggttt ggcggcggct ctgtttacag
      961 gagaaaccga cgtggcgaaa atcctgttgg gcgcgggttt gggtgcggca ggcattttgg
     1021 cggtcgtcct ctccaccgtt accacaacgt ttctcgatgc ctattccgcc ggcgcgagtg
     1081 cgaacaacat ttccgcgcgt tttgcggaaa cacccgtcgc tgtcggcgtt accctgatcg
     1141 gcacggtgct tgccgtcatg ctgcccgtta ccgaatatga aaacttcctg ctgcttatcg
     1201 gctcggtatt tgcgccgatg gcggcggttt tgattgccga ctttttcgtc ttgaaacggc
     1261 gtgaggagat tgaaggcttt gactttgccg gactggttct gtggctggcg ggcttcatcc
     1321 tctaccgctt cctgctctcg tccggctggg aaagcagcat cggtctgacc gcccccataa
     1381 tgtctgccgt tgccattgcc accgtactgg tgcgcctttt ctttaaaaaa acccaatctt
     1441 tacaaaggaa cccgtcatga cccgtatcgc catcctcggt ggcggcctct cgggaaggct
     1501 aaccgcattg cagcttgcag aacaaggtta tcagattgca cttttcgaca aaggcacccg
     1561 ccaaggcgaa cacgccgtcg cttatgttgc cgccgccatg ctcgcgcctg cggcggaagc
     1621 ggtcgaagcc acgcctgaag tcatcaggct gggcaggcag agcattccgc tttggcgcgg
     1681 catccgatgc cgtctgaaca cgcacacgat gatgcaggaa aacggcagcc tgattgtgtg
     1741 gcacgggcag gacaagccat tatccagcga gttcgtccgc catctcaaac gcggcggcgt
     1801 agcggatgac gaaatcgtcc gttggcacgc cgacgacatc gccgaacgcg aaccgcaact
     1861 cggcggacgt ttttcagacg gcatctacct gccgaccgaa ggccagctcg acgggcggca
     1921 aatattgtct gcacttgccg acgctttgga cgaactgaac gtcccctgcc attgggaaca
     1981 cgaatgcgtc cccgaaggcc tgcaagccca atacgactgg ctgatcgact gccgcggcta
     2041 cggcgcaaaa accgtgtgga accaatcccc cgaacacacc agcaccttgc gtggcatacg
     2101 cggcgaagtg gcgcgggttt acacacccga aatcacgctc aaccgccccg tgcgcctgct
     2161 gcacccgcgt tatccgctct acatcgcccc gaaagaaaac cacgtcttcg tcatcggcgc
     2221 gacccaaatc gaaagcgaaa gccaagcccc cgccagcgtg cgttcagggt tggaactctt
     2281 gtccgcactc tatgccgtcc accccgcctt cggcgaagcc gacatcctcg aaatcgccac
     2341 cggcctgcgc cccacgctca accaccacaa ccccgaaatc cgctacagcc gcaaacgccg
     2401 cctcatcgaa atcaacggcc ttttccgcca cggtttcatg atctcccccg ccgtaaccgc
     2461 cgccgccgtc agattggcag tggcactgtt tgacggaaaa gacgcgcccg aacgtgatga
     2521 agaaagcggt ttggcgtata tccgaagaca agattaaagc cgtctgaaag gaaccccatg
     2581 accttcccgc cactcaaatc cccgctcaaa ttctacgccg tcgtccccac cgccgattgg
     2641 gtggggcgca tggtcaaagc aggtgccgac acggtgcaac tgcgctgcaa ggccctgcac
     2701 ggcgatgaat tgaaacgcga aatcgcccgc tgtgtcgccg cctgtcaggg cagccgtacg
     2761 cagcttttca tcaacgacca ctggcacgaa gcgatagaag caggcgcgta cggcgtgcat
     2821 ctcggacaag aagacatgga caccgccgac cttgccgcca tagccgccgc cggtttgcgc
     2881 ttgggtttga gtacgcactc cgttgccgaa ctcgaccgcg ccctgtccgt acaccctagc
     2941 tacgtcgcca gcggcgcgat tttcccgacc acgaccaagc aaatgcccac cgccccgcaa
     3001 ggcttggaca aactgtgcga gtatgtgaaa caggcaggcg gcacgcccgt cgtcgctatc
     3061 ggcggcatcg atttgaacaa tgcccaagcc gtactcgcca ccggcgtttc ctcactcgcc
     3121 gtcgtccgcg ccgtgaccga agcggaaaat cccgaagcgg tggttaaagc gtttcaggct
     3181 ttgtgggatg gataaaaccg aaagaagaaa attcaattgc cgtgtaggca aaacttagcc
     3241 cgttatcgca aacatactta actttaaatg tggcatatca tcaaattccg tcatttccgc
     3301 gcaagcggga atccgcctta aaacttgaga aaccatcatt tgaaaaacag tttccgaatt
     3361 tcaaaaatgg attcccgcct gcgcgggaat gacggcaact ggccggttgc gtatcaaaaa
     3421 ataaagtaat tcggctagat atagtggatt aacaaaaatc aggacaaggc gacgaagccg
     3481 cagacagtac aaatagtacg gaaccgattc acttggtgct tcagcacctt agagaatcgt
     3541 tttctttgag ctaaggcgag gcaacgccgt actggttttt gttaatccac tataaataca
     3601 gaaacatcga gaaaccatga acatcatctt aaacggcgaa cccgccgaac ttcacggcac
     3661 aagcgttgcc gacctcatcg cccaaaccgc gccgcaaaag ccctttgccg tggcggtcaa
     3721 caccgttttc gtccccaaag gcgcgtatgc ggaaacggtt ttaaacgaaa acgacaaaat
     3781 cgatatcgtg cggccggtgg tcggcggcta ggcggttttg ccttttcaga cgacccctgt
     3841 ccccaaaaca acgttatggt ggattaactt taaatcagga caaggcgacg aagccgcaga
     3901 cagtacggat agtacggaac cgattcactt agtgcttcag caccttagag aatcgttttc
     3961 tttgagctaa ggcgaggcaa cgccgtactg gtttttgtta atccactata caaaggaacc
     4021 cattatgctc accctatacg gagaaacttt cccttcgcgg ctgctgctcg gcacagccgc
     4081 ctacccgacc cctgaaatcc tcaaacaatc cgtccgaacc gcccggcccg cgatgattac
     4141 cgtctcgctg cgccgcgcgg gatgcggcgg cgaggcgcac ggtcaggggt tttggtcgct
     4201 gcttcaagaa accggcgttc ccgtcctgcc gaacacggca ggctgccaaa gtgtgcagga
     4261 agcggtaacg acggcgcaaa tggcgcgcga agtgtttgaa accgattgga ttaaactcga
     4321 actcatcggc gacgacgaca ccttgcagcc ggatgtgttc caacttgtcg aagcggcgga
     4381 aatcctgatt aaagacggct tcaaagtgct gccttattgc accgaagacc tgattgcctg
     4441 ccgccgcctg ctcgacgcgg gctgtcaggc gttaatgccg tgggcggccc cgatcggcac
     4501 gggtttgggc gcggttcatg cctacgcgtt gaacgtcctg cgcgaacgcc tgcccgacac
     4561 gccgctgatt atcgacgcgg gcttgggttt gccctcacag gcggcacaag tgatggaatg
     4621 gggctttgac ggcgtgcttt tgaacaccgc cgtttcccgc agcggcgatc cggtcaatat
     4681 ggcgcgcgct tttgcactcg ccgtcgaatc cggacggctg gcatttgaag ccggaccggt
     4741 cgaagcacgc gacaaagcgc aagccagcac gccgacagtc ggacaaccgt tttggcattc
     4801 ggcggaatat tgaaaaaggc ggcaaaaatg ccgtctgaag gcttcagacg gcatcgcggt
     4861 ccaaaacggc ggcggcctga aacggacaaa ccgccattcc ccagcatcac ggctttgtcg
     4921 gaaaaaatgg aaaaaccggc cgaaaaacct tgccgcccgt cccgatgccg caaccaacga
     4981 aacactcggc ctccacggtg tgcaggctgc cgcgcaagcc ctaaatacgg caatagaaga
     5041 agcgttttgt tgttgtttga atacacttaa aaatacctaa agccgtccgt aagccttcat
     5101 ccgcaacggt tttaccgctt ttgcatcccc gaatccacgc tcaaacaccc ccgaatgaca
     5161 accctgtccg cgccaaatcg gacggatgtt caaacacggc aggcttattt ccgtcaggca
     5221 cgaagccctc agctatgact gccgaccccg atttgtccga cacaatgaaa gtttgccgac
     5281 ccgaatcaca aacatcggcg gacaggttaa tttgtttatt tttcatcgta ttacaaaaaa
     5341 tccgcattta tttttaaatt tttattgata attattatta ttagcgtata atcaaaacca
     5401 ctcggaagtc gtccattccg aaccattaaa cactgtattc cctcacaatt cactttcaca
     5461 cttggagtcg gcatatacga gacatacatt ccctttttat atatcagata ctcaaaaccg
     5521 aaacgccaaa cccaccttcg cggtgggttt ggcgtttatc gtccggcttt cgcgcctatt
     5581 tgcaagactt gaggttcagt ttgccgtata gggacgtgat tttacgaatt tcttccgcat
     5641 cggcggcatt cacgccggta aacaaaaccg tcatacgcga cacgctcaaa gaatcgtcct
     5701 gcctgtcggc ttcggcaaag tgttcgacaa tatgcgcccc gccgaatccg gcgccggcaa
     5761 gccggttttg cagggcttgg gcgttttccc ggctgttgcc gacacccaaa ctcaatgcgc
     5821 cgtcaaacgg tatggggttg aaacctttgg cagacagctc cgccgcctga ttttcggcat
     5881 cggcggaaac gggcaggacg acgcggtagg ttttgtcggc aggtttggct tgggcggtgc
     5941 gtttttcgac gctcctgctg gcaacgtgcg accatttgcc caaaagtcct ttgatgcggt
     6001 ggtagtcatc ttcgtccatc gtgaggcttg cctgcgcggc gcataaggca tccgccgcgc
     6061 cgttttcgcg ttccgcctgc gccttttcgg cggcgagttt ttcgcggcgg gctttttctt
     6121 cacgctgttt tttctccctc agttttttct gttccgcttc tttcttcaag cgcaactgct
     6181 ccgcctgctc ttcggtcagg atgtcgcccg gtttgagcag tgccgccgta tcctccacgg
     6241 atgccgccgc attgtcggcg gcgggcgttg cggggggcgt gttttcgacg gcccggtttt
     6301 ccggcacgcc gcccgtcgct ttaacggcca atttatagcc caccgtgccg ccgaatacgg
     6361 caatattgag taccgccaaa agggtgaaga gccatttcat tagaatttcc tcaatgtttg
     6421 aaaccccgcc cgcctgggcg gcagtctgtc gggcggcaga atccggacgg attcggacgg
     6481 ataccgcccc gtgttgaaaa agggtgtatt ttttaagtat gttccgattc cccgccttcg
     6541 gcggcaatta ggttcagcag cccgtgaatg acgaggttgt ccgccacgcg cacggtattt
     6601 tccgccaaaa atgcaggcgg cagggcttcg gcaacttttg ccgcgccgcc gccggtaatg
     6661 atgacatcga caggcttgcc cgccccggtt ttttctttca aacgcccgtg catcatcata
     6721 accgagccgc aaaccgcatc catcatgccg ctggcgacgg cattgcccgt tgtggtcggg
     6781 aaaggataac gcttaccggc gtgccggttg aggttggcgg ttcggacggc gagcgattct
     6841 ttcatcaggt ggaaaccggg catgatggtt cccccgagat aatgtccgtc atcggtgagc
     6901 gcgtcaaccg ttaccgccgt gccgcaactg acgacgacgc aggcgttgcg gctgaagcgg
     6961 cggctgccca aggcgttgaa ccagcggtcg gaaccgtgtt cttcggggtg gcggtagtgg
     7021 ttgcgtatgc ccaaagcctg tgcggaagac ggcagccact cgatttttcg ggcgagctgt
     7081 tcctgcactt gtgccttttt gaattctccg cacacggcgc aaccgacgat gcggacattt
     7141 ccatccgcct tttccgccca ctccgcgccc aaaggcgaca aatcgcggta cggcgcgcta
     7201 ccgacggttg cgaacgtgcc gttttccacc cacgcccact tgagccggct gttgccgccg
     7261 tccaacagca gaaaacgttc cgaatcccgc cgcttcggca cggaaaccgg cctgtcgtcg
     7321 gaccgcaggc tgatttcgcc gctgacgacc gtctgtttgc cctctgccgt ttccaagtgc
     7381 aaaacgcctt gtccgtccac gcctttaacc gtgccttcga acacggtttc gccgtcgcgc
     7441 aacagcaata ccgccttgcc gtggtcgcgg ttggcagcct gatattccgc cacaaaaggc
     7501 gcaaatccgt cccgcgcata ttgcaacaac accgcgtcca gttccaccaa cagcgtttcc
     7561 agcagcacgg cggcatcggc attgccccgc cgcgatgccg tctgaaacag cgattgcacg
     7621 gaagcggcat tttctacttc cttgggcagg acaaaattga tgccgatacc gaccacggca
     7681 accgttttgc cgcccgtcct gaccgtttca atcagaatgc cgcccaattt gtcgcgtccg
     7741 acaaccaaat cattgggcca cttaatctgc acatccaaac ctaaacgcga caaggcgcgc
     7801 cgacacgcca ctgccgcaac aggcgacagc gaacccaact catactgcgg ccggtcaaac
     7861 acccagccaa aactgaacat cagacactcg cccaaacggt gcgaccactt ccgcccctgc
     7921 cgccccctgc ccttactttg caggtgggtc acacatatgg ttttgtgcgc cttgtccggc
     7981 gcaatccgcg ccaattccag tatctcgtcg ttgctggacg cgcactcgtg cttcaatgcc
     8041 gtctgaaaac ccgacctttc ccccagctcg cgcaaacctt cggcatcgaa aaccgccaat
     8101 gggcgcacca gccgccaata gccgtcgtgt tggcgcaaca gcccgcgtat gtgcgccggc
     8161 atctgctgcc aaaaaccgtt gagctgctgc ggcttcatat ccgccatacg cgccagttgc
     8221 gagacgtgtt gcggcaaacc gtcggcaagc tccgccaaca cccgccagtg cgaaagcttc
     8281 aaaaccgtca ttttccgccc tctgccgcac ggatttttgc caaagtcttc gttgtcgaag
     8341 tctggtgcag aaacggaatt gaaaacacct gaccgccgcg cgccaacgtt tctgccgcac
     8401 cgacaatctt atccgcagcc caatcgccgc ccttgaccaa aatctcaggt ttgaccgcct
     8461 caatcaacgc cgccggcgta tccccgtcaa accacgttac caaatccaca ctttccaaag
     8521 cggcggcaac ggcggcacgg ttctccaaag gattaaccgg gcggtcgccg cccttgccca
     8581 gacgccgcac cgaagcatcg gtattcaacg ccagcaccaa cgcgtccccc atcgaacgcg
     8641 cctgcgccag ataagtaacg tgccccctgt ggaggatgtc gaaacagccg ttggtaaaca
     8701 ccagcgggcg cggcaacaac gccaaacgcg ccgccaacgc ctcgggcgga cagattttcg
     8761 attcaaaatc agggacagac caagcgtcaa ccatcaaagc ctccgacaaa aaccataaaa
     8821 gacagaaaaa cccacatgat acagaagcat atgcgaaagg caaagccggc ggcgcggaca
     8881 gtacgcgcaa acgggaaaag acccgtaccg aaaagtacgg gcctttatct ggggtggctg
     8941 atggggctcg aacccacgac aaccggaatc acaatccggg gctctaccaa ctgagctaca
     9001 gccaccataa aaacggtttt caatcaaatt cttggcacgc ccgacaggaa tcgaacctgt
     9061 aacccccgac ttagaaggtc ggtgctctat ccggttgagc tacgggcgct catgccgatt
     9121 cgtgctgatt gattggtcgg ggcggtggga ttcgaactca cgaccctctg ctcccaaagc
     9181 agatgcgcta accgggctgc gctacgcccc gacttgaaga agcgaactat acaactcagg
     9241 gaaagatgcg tcaatattta ttttcaagac accaagatga aaaatatagt tttttgattt
     9301 gaaaaaatat ttaatccgtc caaacagccg tattttattt cagggcaaat ttattttcgg
     9361 catcctgctg taaaaacaaa cggaaaatgc gataattttc agcattttct acctgtttaa
     9421 caaaaggacg gatatgtcgg cacaactgat caatggtaaa gaagtttcgc aaaaacgcct
     9481 gcaggcggtt gccgaagcgg tggcgcaacg ccaacagaac aatctgcaca cgccttgcct
     9541 ggccgtggtt ttggtcggag gcgaccctgc cagcgcggtt tatgtccgca acaagaaaac
     9601 ctcctgccaa aaatgcggca tcaaatcact gtcttacgag ctgcccgaat caacatcgca
     9661 ggaagaactg ctggcactgg tcgaccgcct gaatgtcgat tccgaagtgg acggtattct
     9721 ggttcagctg ccactgccga agcacctcga cagccaggcg gttttggaac gtatttcgcc
     9781 ggataaggac gtggacggct tccatcctta caatgtcggc aggctggcgg tcaaaatgcc
     9841 gctgatgcgc ccgtgtacgc ccaagggcgt gatgacgctt ttggaggctt acggcatcga
     9901 tccgaagggg aaaaaagcgg tcgtggtcgg cgcgtcgaat atcgtcggcc gcccgcaggc
     9961 gttggaattg ctgctggcgc gcgcaacggt aacggtctgc cacagcgcaa ccgaaaatct
    10021 ggcagacgag gttgccggag ccgatatttt ggtggtcggc gtgggcattc cgaactttgt
    10081 caaaggcgaa tggatcaaac ccggcgcggt cgttatcgat gtgggcatca accgtttgga
    10141 cgacggcagc ctgtgcggcg acgtggaatt tgaaacggca aaagaacggg cggcgatgat
    10201 tacgcccgtt cccggcggcg tgggtccgat gacgattgcc acattgatgg aaaacaccct
    10261 gcacgcggct tcactgcacg atgcttgagc ggttctgaag ataaaaatgc cgtctgaaag
    10321 gctttcagac ggcattttgc cgtgtccgtt tatttgggca gcttgacgac aaccgtatcc
    10381 gccagtatgt cgtaaagcgt gcggcggtcg cgtttgacca taaagagcag gacaaagttg
    10441 gcaaggaatg ccagcaggtt gatggcgttt tctccgttgt cacctactgc aagaccgata
    10501 acggcggcaa taatggcaac caaaaccgac catgcgattt cgcgtaccaa aaccgtgccg
    10561 acaaaacccg gattacggcc gtcggttttc aacacacgga ttctcatgat tttcttaccc
    10621 aatgactgcc cgtcccggct catatagtag atttgaacga cggtataaac caaaatgccc
    10681 gccagtccta cccaaaagga agtcatgccc aaaagcagcc cgaatatttc ctcactgccg
    10741 ccaatcctgc cttcattctt gatggcgaaa gcaatcagtc cggcaaacgg caccaacaaa
    10801 accaaaaagg taaacaattg gttcagcagc gcggcaagta tccggtcgcc tgcgccggca
    10861 attccgactt caatttcctg cccgttgcgg ttgtcggatg ccgcgtcggt gtagtcgttt
    10921 ttttcttcca tatccgttcc tgataattgt tcttaactga ccccgattct accgccacga
    10981 caccgaaaac gccaatactt aaagaaatcc cgataaagaa ctttacattt tcccaatacg
    11041 gcgttaaaac gcttccttta cgccatacat a
//
LOCUS       DAWGBY010000058        11032 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.058, whole genome shotgun sequence.
ACCESSION   DAWGBY010000058 DAWGBY010000000
VERSION     DAWGBY010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.058"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            141..1538
                     /gene="aspA"
                     /locus_tag="WHG62_001275"
     CDS             141..1538
                     /gene="aspA"
                     /locus_tag="WHG62_001275"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ1725378.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGKLGAVKPESAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAINLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1610..2485)
                     /locus_tag="WHG62_001276"
     CDS             complement(1610..2485)
                     /locus_tag="WHG62_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ1725379.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWWLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(2487..3209)
                     /locus_tag="WHG62_001277"
     CDS             complement(2487..3209)
                     /locus_tag="WHG62_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEZ1725380.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3231..3710)
                     /gene="ybaK"
                     /locus_tag="WHG62_001278"
     CDS             complement(3231..3710)
                     /gene="ybaK"
                     /locus_tag="WHG62_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ1725381.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGNGLIVLMHGDKQISTRNLARHLGAKRIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3785..4147
                     /locus_tag="WHG62_001279"
     CDS             3785..4147
                     /locus_tag="WHG62_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ1725382.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            4182..5045
                     /locus_tag="WHG62_001280"
     CDS             4182..5045
                     /locus_tag="WHG62_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ1725383.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVDAEL
                     EASAEPLAAQQLNLAFATQQDSDGICSIALPHGGILRIAPETALPPYDAAAESAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLAADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELTAPNGSIFKA
                     VHPFFKTENAE"
     gene            5143..6102
                     /gene="ttcA"
                     /locus_tag="WHG62_001281"
     CDS             5143..6102
                     /gene="ttcA"
                     /locus_tag="WHG62_001281"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ1725384.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQSLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(6196..9135)
                     /locus_tag="WHG62_001282"
     CDS             complement(6196..9135)
                     /locus_tag="WHG62_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HEZ1725385.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRAADENPELLFAA
                     KQYSDNILKVQTQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFM
                     IVDEPHKFPTRDSAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSDGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDTMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIHAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLGLLNKLFLDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFADLFTAYLHENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYREFLEKLAQTAKIRMQTLHQAFYCIRNELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTNKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9148..10839)
                     /locus_tag="WHG62_001283"
     CDS             complement(9148..10839)
                     /locus_tag="WHG62_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ1725386.1"
                     /translation="MNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIRGD
                     NLEVLKHLKNAYTNSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELACLANIDEDEAAR
                     ILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVFGE
                     GNFIKDLIVNTSEGGGNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKKIVINDEL
                     YWIQEDAVREQFGKYGNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSYGKTIIGK
                     LRKVSDDFSKFHSILNIGNISKNLTKDGIRELEELFETGKGYSPFETPKPLDLLKRLV
                     LSATFKGNQTDLILDFFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARK
                     AGYPTIFDITKARIEKAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDL
                     PLNDELSEEQLQTLLTTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMNAGFTSAD
                     LLAFIRKLDDDADFNPNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNVVIRV"
BASE COUNT         2658 a         2933 c         2601 g         2840 t
ORIGIN      
        1 ccgaaaacaa cgtttcccgt tttcagacgg catacgatat ggacaatttc atccggccgg
       61 tatagtgttc gtcctgcggc ggcatctttc cgatggcgca ttttttcaat attaattatc
      121 cgacttacaa aggtaaaaac atgactgtcc gtatcgaaca cgatttattg ggcgaccgcg
      181 agattcccgc cgaagtgtat tggggcatcc acaccctgcg cgccattgaa aactttaaaa
      241 tctccacaca aaaaatttct gacgtgccgc agtttgtccg cagtatggtg atggtgaaaa
      301 aggcgacggc acaggcaaac ggtaagttgg gcgcggtcaa gcccgaaagc gccgccgcca
      361 ttgaaaaggc ttgcgacgaa gttctgctga acaaccgctg cctcgaccaa ttcccgtccg
      421 atgtgtatca gggcggtgcg ggtacttcgg tcaatatgaa caccaacgaa gtcatcgcca
      481 acctcgcatt ggaagtcttg ggatacgaaa aaggccgcta cgacatcgtc aatccgatgg
      541 atcacgtcaa tgccagccaa tcgaccaacg atgcctatcc cacgggcttc cgccttgccg
      601 tgtattacag catcggcgaa ttgctcgaca aactgactgt cctgaaaaac gcctttgccg
      661 ccaaagccga agaatttaaa gacgttttga aaatgggccg cacccagctt caagatgccg
      721 tgccgatgac tgccggccaa gaattccaat ctttccaagt gttgttggaa gaagaaatcc
      781 tcaacctcga ccgcacccgc caactgctgt tggaagtcaa tttgggcgca acggcaatcg
      841 gcacgggcgt gaacacgccc aaaggctacg ccgaactggt ggtcaaaaaa ctctccgaag
      901 tcagcggctt gccttgcaaa ctgaccgaaa acctgattga ggcgacctcc gactgcggcg
      961 catatgtgat ggtacacggc gcattgaagc gcacggcggt caaactctcc aaaatctgca
     1021 acgacttgcg cctgctctct tccggcccgc gtgccggctt gaaagaaatc aacctgcccg
     1081 aattacaggc cggttcttcc attatgcctg ccaaagtcaa tcccgtgatt cccgaagtgg
     1141 tcaaccaagt ctgcttcaaa gtcatcggca acgatacgac gattaccttc gccgccgaag
     1201 ccgggcaact gcaattaaac gtgatggagc cggtcatcgc ccaatgtatg tttgaaacca
     1261 tttccctctt gggcaatgca gcaatcaacc tgtccgacaa atgcgtcaaa ggcattacgg
     1321 tcaaccgcga aatatgcgag cgttacgttt tcaactccat cgggctggtt acttatctga
     1381 atccgtatat cggccaccac aacggcgatt tggtcggcaa aatctgcgcc caaaccggca
     1441 aaggcgtgcg cgaggttgtc ttggaacgcg ggctgttgag cgaagaagaa ctcaaccgca
     1501 tcctctctcc tgaaaacctg atgaaccccc atctgtaacg ttgcagacaa atgccgtctg
     1561 aagcagggat gctgcttcag acggcatttt gttatatcaa tcagccggat tatatgccga
     1621 acagtacctt gacttccccc caataaaaca ggcaggcgat agaacacagt gccaacacga
     1681 ttcccgccgt attgattgtg ttgatttttt ccttaaagaa caatgcgccc gaaagcgtac
     1741 ccaaaacaat cacgccgata ttcataccgg caaaaaccaa ggtcggatta tccttcatca
     1801 tttggtgcgc ggtgatgtag gttacgatat tcataaaatt caaaccgccc aagaatatgc
     1861 cgccgaccac actctcaaca cgccatctga ccgatttggc aaacaggcag gcaaacatca
     1921 gcacacccgc cagcacaaat gcaaccagca ggttgcccgc aaatgccgtt ccgcttttgg
     1981 caagctgttt gaacaggata tcgataatgc cgtaacctgc ccacacgccc agcagcaatg
     2041 ccgcctgccg ccacgcgctt cctgattttt tgccaccgct gtgtttccaa agcaggcaga
     2101 acagtgcggc aaatgcgagg cacagcccga ttagtctgcc ttcgctgagt ttttcgccaa
     2161 acagcgtcaa ggcggcaaca atcggcaaaa acagcgacaa acgctgcgcc gcgtcggatt
     2221 tgacgatacc ggcggattct acggatttgc ccataatgac aaatacggac ggcagcagca
     2281 cgcccaatgc ggcaaacagc caccatgtcg gcaaaaatgc gccgatattg ccgacatccg
     2341 gcttcaatac cagcagggtc agtatgaccg cgaccacata attgacggcg accgcctgcg
     2401 cgatgtcgat ttttttcttc cttgccattt tcagcaaaat ggaaaccgac acgctgaaca
     2461 cgatgctgat taacaggtaa gccatactat atccatttct cgggtgcaac cgccctgccg
     2521 ccgttgaagc ggataaagcc ggcgatgatg cggtagaaat accagacgtt cgttgcaata
     2581 ataatcagca cgccgatacc caaaagggca gtcagcgcac ccaaaatata aagccaaaat
     2641 gtgcgccaaa aggttttaat caggtattcg gtatgtgcgg catagacaat gctgtccaaa
     2701 ctgttccgtt tcatataggc gagaatcacg ccgactatgg gcatataggc gaaaatcacg
     2761 ccgactatgg gcatgaacag catgattgca cccaaaccga acaggatgta ggcggcgagg
     2821 acatagttgc gcccgcttcc gccgccggac ggttcgtaag tatggcacga acgtgatgcc
     2881 tgccgttcaa acgcctgtct gaacgcctgt tcgcggcgca tctgttcgcg gtaaaactgc
     2941 tccctgcgcg cctgttcgcg gcggaatgcc tcttcctgcc gcccgcgttc ctcatgccgt
     3001 ctgaaggacg cgtcgtattg catccgtttc gacaggtcgg aaagcgtatc gtaagcccgt
     3061 tggatttctt tgaacttttc ttccgcctgc ggattgcccg gattgcggtc gggatggtat
     3121 ttcattgcca gcttgcggta ggcgcgtttg atttcgtccg cccccgcctg cggcgacacg
     3181 cccaatacgg catacaaatc tttgtccata ttgttcctta tacttcccgg tcaaaccgcc
     3241 gcctgtattg ttttcgggtt caaaatattt aaatctccgg gacggatacc gataatgaac
     3301 ccgcgtttcc cgccgttgat atagatggtt tccaaatcca tcaccgactg ttcgacgtaa
     3361 atatccaatt ttgtccggat gccgaacggc gttgtgccgc cgaccagata gcccgtccac
     3421 ttgtttgcct gtgcgggcgt agcgggttcg atgcgtttcg cacccaaatg ccgagccaga
     3481 ttgcgcgtgg aaatctgttt gtcgccgtgc atcaagacaa tcagcccatt cccgttttca
     3541 tcttgcaaaa caatggtttt aatgaccaag tgttcgtctt tgccgaatag tcgggcaaac
     3601 tgcgccgtgc cgccgtgttc ctcataggca taggtaaaag gttcaaattc gatgccgttt
     3661 tcacgcaaaa cgcgcacggc aggtgttatc ggataagtgt gtttactcat ttttcgtcat
     3721 gcaaaacatg gaaatcggtc aagcgcaatg ttaccatata tcccctttat cgaaggaaac
     3781 cgatatggat atccgatatt tcggcacaac gccccgctat tccgaagccg tcggcgcaaa
     3841 cggcttgatt ttcctctctg gcatggttcc cgaaaacggt gaaacggctg ccgaacagac
     3901 tgccgacgtg cttgcccaaa tcgaccgctg gctggcggaa tgcggctcgg acaaagcgca
     3961 cgttttggat gcggtcatct atctgcgcga tatgggcgac tatgcggaaa tgaacggcgt
     4021 gtgggacgct tgggttgccg ccggcagaac gcccgcccgc gcctgcgtgg aagcgcggct
     4081 cgcccgtccg gagtggcgcg tcgaaatcaa aataaccgcc gtgaagagag acgcggcaac
     4141 tgcataaaca gatttcctta tattttcaga gtaggcaaat gatgaaaacc ttactgccct
     4201 ttttcggcgt ggtgcgcgtc agtggcgaag accgccaaac cttcctgcac ggacagcttt
     4261 ccaacgacat caataatctt cagaccgggc aggcgtgtta tgcgacttac aacacgccca
     4321 aaggccgcgt catcgccaat atgattgtcg tcaaccgagg cggcgatttg ctgctgatta
     4381 tggcgcaaga cctgcttgaa gcaaccgtca aacgcctgcg gatgtttgtg ttgcgtgcca
     4441 aagtcgtttt tgaaatcctt gaagattacg ccgtcgacgc ggaattggaa gcatccgccg
     4501 aaccgcttgc cgcgcaacaa ctcaaccttg cctttgccac acaacaagat tcagacggca
     4561 tctgctctat cgctctgcct catggcggca tccttcgcat cgcacccgaa accgccctgc
     4621 ccccttatga tgccgctgcc gaaagcgcgt ggcggctgca cgaaatccgc agcggttatc
     4681 cgtggatatg cgcggctacc aaagaaaccg ccgtcgccca aatgctcaac cagcacatca
     4741 tcggcggcgt acacttcaaa aaaggctgct atccgggaca ggaaatcatt gctcgtgccc
     4801 agtatcgggg gcaggtcaaa cgcggcttgg cggtattgtc gggaaattcg gccgtcgaag
     4861 caggaaccct gctggcggca gacggcgaag aggccggcat cgtactcgac agcgttcaag
     4921 attcggaaaa ctttaccgcc cttgccgtga ttaaattctc cgccgcacaa aaagaactga
     4981 ccgccccaaa cggcagtatc ttcaaagcgg ttcatccttt ctttaaaacc gaaaatgcag
     5041 aataatccct ctaatgccgt ctgaaccttt ttcagacggc attttaaaac cgcccctgtt
     5101 ttcggttaca atgccgcatc cccaattttt caaaccaccg ccatgtccaa aaaaaccaag
     5161 caagaactcg aaaacaacaa actcagtaaa cgcctgcgcc acgccgtcgg tgacgcgatt
     5221 aacgatttca acatgatcga gccgggcgac aaaatcatgg tctgtctctc cggtggcaaa
     5281 gacagctatg ccctcttgga catcctgcgc cggctccaag ccagcgcgcc gattgatttc
     5341 caactggttg ccgtcaatct cgaccaaaag cagccgggct tccccgaaga agtattgccg
     5401 acctatctcg aaagcatcgg cgtgccgtac aaaatcgtcg aagaagacac ttattccacc
     5461 gtcaaacgcg tgttggacga aggcaaaacg acttgttcgc tgtgcagccg cctgcgccgc
     5521 ggcatactct accgcaccgc aaaagaattg ggctgcacca aaatcgcctt gggacaccac
     5581 cgcgacgaca tcctcgccac cttgttttta aatatgtttt acggcggcaa actcaaagcc
     5641 atgccgccca agctggtgag cgacaacggc gaacacatcg tcatccgccc gctggcgtat
     5701 gtcaaagaaa aagacttaat caaatacgcc gaattgaaac aattcccgat tatcccgtgc
     5761 aacctctgcg gctcgcagcc caacctgcaa cgccaagtca tcggcgatat gctgcgcgat
     5821 tgggacaaac gctttcccgg ccgcatcgaa tcgatgtttt ccgccctgca aaacgtcgtc
     5881 ccttcccacc ttgccgatac cgaactcttc gactttgccg gattggaacg cggtcaaagc
     5941 ctgaaacacg gcggcgattt ggcgtttgac agcgaaaaaa tgcccgaacg tttttcagac
     6001 ggcagcgaag aagatgagag cgaaatcaaa atcgagccgc aaaaagccga acgcaaagtc
     6061 atcaacattc tggctaacaa gccgaaaacc tgcggcgcgt aaccccccgc cgtcaaaaat
     6121 gccgtctgaa gcccgtttgg cgtttcagac ggcattttaa aatcccgaag cagacggctt
     6181 ccaaacattt gtttctcagt gtccgttttc agaatgcccg cctgcgggca tattttgccc
     6241 gatcagttcg gctatcctct cgccgtcaaa ctgcgttttg aacaccacct tgatttcttt
     6301 ggaaatctcg gcaaacagct tttcggcatg tttgattttc cgctcttcgc tttttcgcaa
     6361 atcttccgcc ccgtcagtcc ctttggcttc aatcacaaag ttcaggatct cgccgctttt
     6421 ggttttcacg atataggcaa aatcgggcga atacgtgccg ccgccggcaa cagggatttt
     6481 gatggagttt ctcggtattt tggtaaatac ggttacgcct tcaatttggt tgttggcgac
     6541 attttcatgt tctatatccg aatcgtagaa aatctcgtcg aagagatagc cggcggcagg
     6601 ccggtgctcc gtatcttcaa atctgcccaa atctgctttt ttcaccgcgc gcggtttgcc
     6661 gtctttattg gtaaatttgg tcggatggat tttgctgccg acaagccggt aatccagttc
     6721 gaatttatgg aaggaatgat gaagcaaaaa ccggttgaag ccgtttttga tttgggcgat
     6781 ggtttgcata ttcaaaaaat cgccaatgtt cagttcgttg cggatgcagt aaaacgcctg
     6841 atgcaaagtc tgcatacgga tttttgccgt ttgtgccagt ttttccagaa actctcggta
     6901 agtcattgtg ttgaaacgga taaaatcttc atcttcaaaa ctgtctatgc ggcgggaaag
     6961 cataagcccg ttgttgatat aagcttcgtt taccgccgtg cgtatgcctg cctgtgggaa
     7021 tttggcagcg ttttcatgca aataggcggt aaataaatcg gcaaattcgg cttcatcctt
     7081 gattttatac tgcaaaacgg ctttatggtg aatcagctcc cacaaggctt tgagttcttc
     7141 atatttgcct tcgcgcatga tgatggtgtc tttgccttcg tctttggcgt tgctgacttt
     7201 gcctttgtcc aaacctttgg ggaaggcttc gggataggcg gcttttaatt tgtcatagcc
     7261 gtcttcggca aagttttcat tgtcgtcaat gatgccgtct aaaaacagtt tgtttaacaa
     7321 tcccagcggt ttgatatcgg ggtatttttg caatattttt tgtttcagct cttcggtaaa
     7381 ctttttggag atttcttcct gaaaagaatt atcgttgatt tcgccgacaa gctgcttcac
     7441 aaagtctttt tcgctgctat cgacaaaata attcagtttg tacggcacat cgcgcacccg
     7501 cgccatcagc tcgtttaccg gcaggcgcag gccgcgtccg acttcttgca gcttggaagt
     7561 cgtgctgccg ctggaacgca gtttgcaaat ctggaaaacg ttgggattgt cccagccttc
     7621 gcgcagcgtc catttggaaa aaataaagcg gcgcgggttg tccaaagaca acagtttttc
     7681 cttatcgtgc aggatttcat tgatttcctg ctcgattcta tcgtcgctgt ctgtattgtc
     7741 tttggaaaaa taaccgccgt ggcaggcgga tacatcgtcc aacgtctttt gcaggtaatc
     7801 gcggtaaaac gggtcgcttt ccgttttcag gcggcgtgcc gcttccgcgt gaatccagct
     7861 ttcaaattta tctttcaggc tgcctgaaag ctcgttgccg ctgcggtagc ccgcaatatc
     7921 atcaataaaa aacagcgtca gcggcttgat tttgggctgt ggcgcgcgtt ctgccaaaag
     7981 tgcgcgttcc agcttgaaat gttcggcaac cgcccgctgc atcatcgtat cctgcaccgt
     8041 ttgcgaatag gaataagggt tgatgacggc acccgttttc aactccaagc cgttgcttaa
     8101 caccaccacg gttttattca ttttgtcgat tttcaaatcc gaaatagccg gatggatttg
     8161 cgccaaatct tcgccttttg ccagtttgaa cgtctgcttt ttgtcctttt cgtttaattc
     8221 aaatttcgct tctttgccgt ccgacgacac cagttttacc gccgcatcca tgccgccctg
     8281 catttcttcc tgaaacacgc gcacgccttt gaccagcccg tcgttaaacg cgtctactgc
     8341 cgtcaaacgg taaagcaagt tgtaatattc atcgttaaat gttgcaccgt agcgcaaaat
     8401 atattgcggt tttaagcgtt tgatattgcc ccacgttttc gcgctatctc gggtcgggaa
     8461 tttatgcggt tcgtccacaa tcataaacgg gcgcacggca gccaatgcat caacgggatt
     8521 gtcaaacaaa tccttcaatg ccttgtcgcc cgtatcgttc atggacgacg aattaaccat
     8581 gcccgcgtta atcagcagca catgaatttc ctttttgttt tccgctttga caaattgctc
     8641 aatcgttatg ggcgcattgg actttttgcc cttattcttt ttcgcgcttt ccaccacata
     8701 ggttttcagg cgtacgcctt cataatcgcc gccgaaatcc tgttcaaaat gctctgccaa
     8761 agccttgctt tgcaaaaact gctgtgttcc cgccttaatg gacaaagtcg gcacgaccac
     8821 gataaatttg aacacgccca gccaacggtg cagctcgaac atggtttgtg tgtaggtata
     8881 ggttttgccc gtgcccgttt ccatggaaat atcaaggata ttttggtcgt ccgaacggtc
     8941 ggggaatcgg ccgtctatgc cgttttgggt ttgcactttc aggatattgt ctgagtattg
     9001 ttttgcagca aacaaaagtt cgggattttc gtctgccgcc cgatatttgg gcgttgcccc
     9061 gtcaaacacg cccaaaaccg ccgaaaccgc ccgcatttgg tgcggctggt ttttctcgta
     9121 attaaaaccg ctcatgaatt gcctccgtca aaccctgata accacattca actcaatctc
     9181 ttttttattg gcataaccgc gaaccgcctg gtcaagttcg tgctgcatgg cacttgccat
     9241 attgctgccg aatacaatca cgcggttggg attgaaatcc gcatcgtcgt ccagcttgcg
     9301 gataaacgcc aacaaatcgg cggaagtaaa accggcattc atcagataca gccgtttttc
     9361 gcacagatac gccgtgtaag cccctaaccg cacaggctca accggcgtgg tcagtgccgc
     9421 cccgtcatac agcgtccagg tggtcagaag cgtttgcagc tgttcttcgc ttaattcatc
     9481 gttaagcggc aaatccggtt gttcgggcga aaaatccttg tccggatgct gcctgaaatt
     9541 gtctgccgtt tgaaagattt tgaagcccga atcgcccgtg taatcgggat gttcgacgcg
     9601 gattttggcg gcggcttttt ctatgcgggc tttggtgatg tcgaagatgg tcgggtagcc
     9661 tgctttacgg gcttcggatt tttcagcggt tttttcggga agctgtacac agatatagcg
     9721 gcggttaccg ttttgtcctt cggcgttaag ctgcatcacg gcgtgggcgg ttgtgccgct
     9781 gcctgcgaag aagtctagga ttaggtcagt ttgatttccc ttgaaagttg cagaaagaac
     9841 taatcttttc aataaatcta atggttttgg tgtttcaaaa ggagaataac cttttccagt
     9901 ttcaaacaac tcttctaatt cacgaatacc atctttagta agatttttac ttatatttcc
     9961 aatatttaag atgctatgaa atttggaaaa atcatcggat acttttctaa gttttccaat
    10021 aattgttttc ccataagact tcggaattaa gatatattca ttattttcaa tatctttatc
    10081 aattttgttt ttaaactcaa ttccttttat ttcaataata tcttcgtaat gcaagttccc
    10141 atatttgcca aactgttcgc gaacggcatc ttcctgtatc caatataatt catcattgat
    10201 tacaattttt ttgccgcgta tatcttttgg tctttttaga ttgtcaaaat gagtaatatc
    10261 tttcgcataa actaaaacag tttcatgccc atttacaaca tattttgcat taccaccacc
    10321 ttctgatgta ttaacaatta aatctttaat aaaattccct tccccaaaca cttcatcaca
    10381 caacaatttc aactgcgccg cttcgttatc gtcaatcgag ataaaaatca cgccgtcgtc
    10441 ctttaacagt tcgcgggcga tatacaggcg cggatacata aaggtcaacc atgcactgtg
    10501 cgagtttgag cctttgtcgg tgaaatctaa aatccgcgcg gcttcgtctt cgtcaatatt
    10561 ggctaagcag gcaagttcgg ctggtgtgaa tttgcggtcg tcctgataga caaagccgtc
    10621 tgatccggtg ttgtagggcg ggtcgatgta aatcatcttc acgctgtttg tataggcgtt
    10681 ttttaagtgt ttcaacactt ctagattgtc gccacgaatc agcaggtttt ggctgcctgc
    10741 attttcgggc ttggcgttgt gcgtcttatc ttcacttatc agggtttcgg gcggcaggtt
    10801 gcgaagcagg cgggcatatg atttgcccag ccagttcatt tcgtaaaatt cgcgtccgat
    10861 gtcggtctgt ggcgcaattt cggcttgtaa tctgtcgata aggaaatttc cgtctgcgtc
    10921 aaaacaggcg ggaaacagtt ttttgagctg ttcgagttgg gtagagttgg cggtaatgcc
    10981 gtctgaagtg tagattgcct cggtgttcgc cccggctgtg tcgcttagat ca
//
LOCUS       DAWGBY010000059        10952 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.059, whole genome shotgun sequence.
ACCESSION   DAWGBY010000059 DAWGBY010000000
VERSION     DAWGBY010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10952
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.059"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            131..310
                     /locus_tag="WHG62_001284"
     CDS             131..310
                     /locus_tag="WHG62_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725387.1"
                     /translation="MFWYVIGFCAFVVALLSLWVNAGAFGMQEDDTPQSDYERRLGLG
                     AKLKNKNPDTDEKRQ"
     gene            complement(524..1525)
                     /locus_tag="WHG62_001285"
     CDS             complement(524..1525)
                     /locus_tag="WHG62_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ1725388.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSQSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEAYEPPAHWEWIRKIRDTVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRNILAEFEREMNT"
     gene            complement(1602..5435)
                     /locus_tag="WHG62_001286"
     CDS             complement(1602..5435)
                     /locus_tag="WHG62_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ1725389.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAADKAVGRFDSSFDETSQKRRQILARLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEFVELAGLDGKHPIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGRNIVNTKRLEIPSHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHESVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVQAAAEHICELARVRDGEGFIAISPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKERWDWLLANLDAPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTV
                     RGRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLNGVISGEHGI
                     GITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAIRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKNVPAKTPRSMLGIEDDKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLNGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5696..5792
                     /gene="ffs"
                     /locus_tag="WHG62_001287"
     ncRNA           5696..5792
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WHG62_001287"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5960..7651
                     /gene="dld"
                     /locus_tag="WHG62_001288"
     CDS             5960..7651
                     /gene="dld"
                     /locus_tag="WHG62_001288"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ1725390.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGRALAVV
                     RPGTILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            7783..7890
                     /locus_tag="WHG62_001289"
                     /pseudo
     CDS             7783..7890
                     /locus_tag="WHG62_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7946..8317
                     /locus_tag="WHG62_001290"
     CDS             7946..8317
                     /locus_tag="WHG62_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ1725391.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8472..9020
                     /locus_tag="WHG62_001291"
     CDS             8472..9020
                     /locus_tag="WHG62_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ1725392.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLAQTEINPELQAYA"
     gene            9155..10246
                     /locus_tag="WHG62_001292"
     CDS             9155..10246
                     /locus_tag="WHG62_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ1725393.1"
                     /translation="MNAQTLIANVAELVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDK
                     YLADILQGRVLAGTGMSNTVKHLAGIEKHNLQAERADGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANIVNAEVNRYLDDGYDSLKARLD
                     GAWAETERLAGLAWNNTPDTLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
     gene            10718..10888
                     /locus_tag="WHG62_001293"
     CDS             10718..10888
                     /locus_tag="WHG62_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEZ1725394.1"
                     /translation="MAQYMCGPCGWIYDEELGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2553 a         3007 c         2946 g         2446 t
ORIGIN      
        1 aggtctctat ttgtactgtc ttcggctcgc cgccttgtcc ttatttaaat ttaattcact
       61 atatttgccc gtgcgtttgt gataaattcg gcactgtatt tgatatgatt ttaacaaatc
      121 gggaggggca atgttttggt atgtgattgg cttttgcgcc tttgtcgtcg cgctgctgtc
      181 gctgtgggtc aatgccggcg cgttcggtat gcaggaagac gatactccgc aatcggatta
      241 tgaaaggcgt ttgggcttgg gtgcgaagct gaaaaacaaa aatccggata cggacgaaaa
      301 acggcaataa agacaacaaa tgccgtctga aaggttttca gacggcattt gctttggagc
      361 ggatatagtg gattaacaaa aatcaggaca cggcgacgaa gccgcagaca gtacaaatag
      421 tacgaaaccg attcacttgg tgcttcagca ccttagagaa tcgttctctt tgagctaagg
      481 cgaggcaacg ccgtaccggt ttttgttaat ccactataca tattcaagta ttcatttctc
      541 gctcaaattc agccaagatg ttccgaactt catccgcatc cttaaccgtt cggacgcggt
      601 caaacagcgt ttgcgccggg tcgaacgttt ttttcatcat gcccaaccat tgcttaagac
      661 gggcgatcgg gtatttattg tttgcctctt ttgtcaggca cagctcgaaa aactgccgta
      721 tccatttgga aacttcggca aaatccgtgt ctttgaccgg cccgccgttc tcgtattgct
      781 tgatttgccg cgccaaatcg gggcggatga ccgcgccgcg accgagcatc acgctgttgc
      841 agccgctgat tgttttgatg ccgatatagt cctgcaggct gaaaacgtcg ccgttggcgg
      901 taacgggaat attgacggta tctcggattt tccttatcca ttcccaatgc gccggcggtt
      961 cgtaagcctc ggctttggta cgcgcgtgta cggtcagtcc gcatgcgccc ccttcggcaa
     1021 tcgcacaggc gcattccaaa gcccggcttt tatcttcata gccgagccgc atttttgcgg
     1081 tgagcggaat atgtgcgggc aaacgtccgc gcagcgtttt gacgatgtgg aatatcagtt
     1141 ccggctcttt taaaaggatt gcgccgcctt tgtgtttgtt gacggtgggc gcggggcagc
     1201 cgaagttcaa atcgattttg ttcgcaccga agcggacggc ttccagcgca ttcgccgcca
     1261 tattgtccgc atcgctgccc aaaagttgga cggtgcaggg cgtgccggaa aacgttttgt
     1321 ttccgttggc gatttcgggg acatatttta accatatgga ttgggaatgc acggtatggg
     1381 taatgcgtac aaattcgctg acgcattcgt cgtagccgcc aatacgcgtc agcaggtcgc
     1441 gcatcacgtc atcgaccaga ccctgcatag gggcaaggat gattcgggtt ttttgtttgg
     1501 gttcggttgt ttgtccgtca atcatgattt gggtaggtat tgggtttaaa caatgccgtc
     1561 tgaaggcttt cggcgttcag acggcatttc cgtgtccgtt gttacagcaa tactttttcc
     1621 acgccgccgt tgttggcttt tttgacgaac tcgtccagcc agttttcgcc gaggatgtgt
     1681 ttcgccattt cgatgacgat gtagtcggca ggcatattgt tgtcgtcggc gtagcggctc
     1741 aaaccttgca ggcaggcggg gcaggaagtc agcattttga cgggttcgcc ctgcggcagc
     1801 tctttgaggt ttttctcgat ttcctcttgt ttgcggaact tgacctgagt ggcaatgtcg
     1861 ggccgtttga cggcgaacat accggactcg ccgcagcagc ggtcgcttaa gacgactttc
     1921 tgtcccatga ggctgcttgc catttgggtg gcgttcatgg ttttgatggg tgtgtggcag
     1981 gggtcgtggt agaggtattg ctgacctttc acgccgttca gtttcacgcc tttttcgagc
     2041 aggtattcgt ggatgtcgat gatgcggcag ccggggaaga tttcttcgaa gcggtatttt
     2101 tcgagctggt cgtagcaggt accgcaactg acgacgacgg ttttaatgtc gaggtagttg
     2161 agggtgtttg ccatacggtg gaaagccacg cggttgttgg tgctcatttc ttcggctttt
     2221 gccttattgc cgcccgcgtc ttgcggatag ccgcaacaca tatagccggg cggcaggacg
     2281 gtttgtacgc cgacgtgcca gagcatggct tggacggcaa gcccgatttg gctgaacagg
     2341 cgttccgaac cgcagcccgg gaagtagaac acggcctcgg catcttccgg cgcggcgggg
     2401 ttgcggatga tggggatgct tttgtcgtct tctatgccca gcatggagcg cggtgttttg
     2461 gcgggtacgt ttttgggcag ggggcggttg atgaaatgga taacctgttc tttaatcggg
     2521 gctttgccga cggttgcctt gggttcggct ttttgctttt tagtgccgat cggaagaagc
     2581 ttgccgattt tgtaggcaaa gttctgagct gggaagccgg tctgtatcat cgcggcgcga
     2641 agggctttga tggttttcgg gccggtggcg tttaggaatg ccatacccat tgaagctgca
     2701 ggcgcaaagc gtttatgacc ggaatcggca aggtagttgc ggatggctac ggttacgtcg
     2761 ccgaagtcga tattgacggg gcagggtttg acgcagcggt ggcacactgt gcagtggtcg
     2821 ccgatgtcca tcagttcttc aaaatgtttg acggaaacgc cgcgccgggt ttgctcttcg
     2881 tataagaagg cttcggtcag caagcctacg ccgaggattt tgttgcgcgg gctgtacagc
     2941 aggttggcac gcggaacgtg ggtggagcag acgggcttgc atttgccgca gcgcaggcag
     3001 tctttgacgg aatcggcaat cgtgccgagg tctgattttt ccataatcag cgattccgcg
     3061 cccaaaagct cgaaagacgg cgtgtaggcg ttgcgtaagt ccgagccttt catcagtttg
     3121 tgacggttga aggtgtgttt gggatcgact tggtttttgt agtcccaaaa cggctgcatt
     3181 tcttcgtcgc ttaaaaattc gagcttggta atgccgatgc cgtgttcgcc ggaaatcacg
     3241 ccgttaagcg aacgggcgat tttcataatg cgttccacag aacggtatgc cgtctgaagc
     3301 atttcggcat cgtctgaatt gacggggatg ttggtgtgga cgttgccgtc gccggcgtgc
     3361 atatgcaggg cgacaaagac tctgccgcgc acggttttgg cgtggatttt gcccaagcct
     3421 tggataattt tggtgtcggt tttgccgctg aagatttcag aaagcggctt cattacgtct
     3481 gctttgacag atacgcgcag gcggaaatct cggaatgcgg taaagcagct ttcattgtct
     3541 ttggcttcgg gcgcggcatg gacggctgcg ccatagcggg ctttgtagtc ggcaagcggc
     3601 gcgtccaaat tggcgagcaa ccagtcccaa cgttctttga cggcggcaac gtgggccaag
     3661 gcgtgtttgc cgcgttcgcc caaaagttcg gcggttggca ggtctgttcc cattttgtcg
     3721 atggggagtt taccggacag atattgctcc aatgcggcgc agagtttgag tttgttttgg
     3781 atggaaagct cgatgttgat gcgttcgatg ccgtctgaat actcaccgag cctttcgagt
     3841 gggattacca cgtcttcgtt gattttaaag gcgttggtgt gtttggcgat ggctgcggtg
     3901 cggctgcggt cgagccagaa ggttttgcgt gcttcgggag atatggcgat aaagccttcg
     3961 ccgtcgcgga cgcgggcgag ttcgcagatg tgttcggcgg ctgcctgtac ggctgcttcg
     4021 tcatcggaaa ccacgtctgc cagcaagacc attttcggcc ggcctttgcc tgccgctttg
     4081 gtggcataac cgacggcacg gacataacgc cagtctaaat gctccaaacc ggccagacgt
     4141 acgctttcat gggcaagcag gaaatcgcgg atttcgacaa tggacggcgt agcagtagcg
     4201 accgtaccga aaaactccat acacacggtg cgcgtgtatt tcggcatttt gtgcaatacg
     4261 aatgcgacgc cggtgatgat gccgtccgtg ccttcttttt gcacgccggg caggccgctc
     4321 aagaatttgt cggtaacatc tttgcccaaa ccgactttgc ggaatttgtg gctgggaatt
     4381 tccaaacgtt tggtattgac gatattgcgg ccgtctgaat ccagcgtatg tacgtcaaac
     4441 acggcggttt cttcatcgtg gattttgccg aaattgtggc gcacgcgctc gatacgcaac
     4501 cattcgcctt gagggttgac catctgccag taggcgaggt tgtccaacgc cgtcccccac
     4561 agcacggctt ttttaccgcc tgcgttcatt gctacattgc cgcccacgca ggacgcatcg
     4621 gcggaagtcg gatcgacggc gaacaccaaa cctgcctgat gcgcggtttc ttccacccgc
     4681 cgcgttacca cgcccgcgcc gcaatggata atcggatgtt tgccatccaa gcccgccagt
     4741 tcgacaaact ccacgccgcg atgtttgtcc agcttttcgg tattgatgac cgcgctcatt
     4801 gcgtccaaag gaatcgcgcc gccggtataa cccgtgccgc cgccgcgcgg gataataacc
     4861 aagtccaatt cgattaaagc gcgcaccaaa ggcgcaatct ctgcctcggt atcaggattg
     4921 acgacgacaa acggatactc cacgcgccag tcggtcgcat cggtaacgtg cgttacgcgc
     4981 gccagcccgt caaacataat attgtgcggc ttggtgattt tgctcaaacg cgccaaaatc
     5041 tgccgccgct tttggctggt ttcatcaaaa ctgctatcaa aacgcccgac cgctttgtcc
     5101 gccgccgcaa ccaagacatc cacttgccga ttgtcgtcgc ggcgtttgcg gatttcgttc
     5161 aggcggtggc gcatttcgcg taccaacgcg gcgcggcgtt tcggatgctc caacaagtca
     5221 tcgaccagat atggattgcg cacaactacc caaatatcgc ccaacacttc aaacagcatc
     5281 cgtgccgaac gtccggtttt acgctgtccg cgcaagtctt gcagaatctg ccacgcttcg
     5341 tcgcccagca ggcggatgac gatttcgcgg tcggtataag aagtatagtt atagggaatt
     5401 tctcgaatac gctgaggggc agtagtcgtg gtcatggtgt gtccgtgctt ggcagttttt
     5461 atttgaatgc cgtctgaaaa ttcggtttca ggcgagtttg aaaaggcgat aatgtagttc
     5521 aatttttgat atttttcaat gccgaaacag gaaataccct tatagaaaca aaataacgct
     5581 ttgagaaatt gttgacaata ttatcaaata taaattttag gtggtgtttc cggcgtatga
     5641 ccgtatcaaa acggttgagt ttttcagaaa acccgttata atgccgtttc tctgaggcgg
     5701 gtctccccgc atggcaaatc ggaacaccgg gtcaggggcg gaagccagca gcccactccg
     5761 gtgcgccagt gccgggggtt tggcccgccg ccctatttga aacgccggag ctttgatgtt
     5821 ccggcgttcc cgtatcgcac cgatgccgtc tgaaagccgt tcagacggca ttttctttac
     5881 tttgccataa cgtataacta caatgggaaa acaatttcaa tgtgcatatg cacctgccga
     5941 caattttaag gaaactgcca tgagcgcatc acaattactg tcaagactga cccaaaccgt
     6001 aggcgaaaaa tacatcatca ccgaccccgc gaagaccgaa caataccgcc aaggctaccg
     6061 cttcggcgag ggcagggcgt tggcggtggt gcgccctgga accattctgg aaatgtggaa
     6121 aattctgcag gcctgcgtcg aagcggacgt gattgtgatt acgcaggcgg cgaataccgg
     6181 tttgacgggc ggctcgaccc ccgacggcaa cgattacgac cgcgacatcg tgattgtgaa
     6241 caccatgcgg atgaacatca tccaaaccat caacaacaac gaacaagtcg tctgtctgcc
     6301 cggttcgacc ctgaaccagc ttgaattgct gctgaaacct ttggggcgcg aaccgcattc
     6361 ggtcatcggc tcatcctgta tcggcgcgtc cgtcttgggc ggcgtgtgca acaactccgg
     6421 cggcgcgttg gtacagcgcg gcccggccta caccgaaatg gcgttgttcg cccaaatcaa
     6481 cgaagaaggc aggttggaac tggtcaacca cttgggcata gacttgggcg acacgcccga
     6541 agaaatcctg accaacctgc aaggtcatca ttatcaaaac aaagacatca aacaagacgc
     6601 gggcaaagga cacgaccacg cctattgcga acacgtccgc caagtggacg aaccgaccgc
     6661 cgcgcgtttc aatgccgacc ccgcccgcca ttacgaagcc tcgggctgcg cgggcaaact
     6721 gatggttttt gccgtccgtt tggacacctt cccgcaagaa aaacaaaccg ccgtgttcta
     6781 catcggcacg aacgacatca acgagctgac cgacatccgc cgcgccgcct tgggcgaatt
     6841 tgaaagcctg cctgtttccg gcgaatacat ccaccgccac gctttcgata ttgccgacgt
     6901 gtacggcaaa gacacgtttt acgtcatcaa aaaattcggt acgcaccaac tgccgaaatt
     6961 atttgacttg aaggcgcgcg tggacaggtt cggcaaaaaa gccagcttcc tgcccaaaca
     7021 tttttccgac aaggccatgc agttcgtcag caaatacctg cccgaccacc tgcccaaatc
     7081 catgcgcgat taccgcgaca aatacgaaca ccacctgatt ctgaaaatgg gcgggaaagg
     7141 cgtggatgag gcgcgcgcgt tcttaaaaga atattttgca caccacagcg gcgcgttttt
     7201 cgagtgcaac gccgaagaaa cccaagccgc gatgctgcac cgtttcgccg tcgcctccgc
     7261 cgccatccgc taccgcgccg tgcatgatga cgaagtggaa gacttggtcg cgctcgacat
     7321 cgccctgcgc cgcgacgatc gcgactggtt tgaaaaactg ccgtcggaaa tcgacaataa
     7381 aatcatccat aaactctact atggacattt catgtgccac gttttccatc aggattacat
     7441 catcaaaaaa ggcaacgact gcatggcgtt ggaacacgaa atgctgcatc ttttagacca
     7501 acgcggcgcg caatatcccg ccgaacacaa cgtcggtcat ttgtatgaag ccaaacccgc
     7561 gctcaaacag ttttaccgca aacttgaccc gaccaacagc ttcaacccgg gcgtaggcaa
     7621 aaccagcaaa aagaaaaact gggcggaata agcgcgtccg ctttgaaggc aggcaatgcc
     7681 gtctgaaggc aaaacgccgt tcagacggca ttgtcgggtt tgaagttccc catcgggtaa
     7741 tcgctttcaa gccgtatgcc ggcacaggcg cgcgcgcctc ccaaatatag tggattaaat
     7801 ttaaatcagg acaaggcaac gaagccgcag acagtacaga tagtacggca aggcgaggta
     7861 acgccgtact ggtttaaatt taatccacta taaagtctga tcctaccttc ccaaagggca
     7921 gggtttcaac cgaaaaggaa acacgatgaa accatacaaa atctacaccc atcccgccct
     7981 gccgccccaa gccgtcaaac aaggctggtc gtggccgggc cttttgttcg gcacgctgtg
     8041 ggcgtgtttc aaaagaatgt ggggtttggg gctggggctg acgggcgcga tattcgtgct
     8101 ggcggtgttt gcccaactgg tttacggcga cacgcccgcc acagactcgg cgtttaacgt
     8161 attgggcttg gcggtttccg tctggttcgg cgcaaagggc aacagccttt atgcacgcca
     8221 ccttttatcg cgcggctata ccgaattgcc cgaaacggtt gaggcagcca atccccaagc
     8281 cgcattggcg caatatttcg ggcgcggggg ccgataagcg cgttttcttt tccatcatgc
     8341 cgtctgaaaa atgttcagac ggcatttctt ataacctttt gtttgcagca cataaccaat
     8401 cagtctttcc tattccgttc cgaaatgcat accatgcgcc cgtacccaat atttgcgaac
     8461 aaggaaagaa aatggcacgt ttaaccgtac acaccctcga aaccgccccc gaagccgcca
     8521 aagcgcgcgt cgaggcggta cttcaaaaca acggctttat ccccaacctt atcggcgtat
     8581 tatcaaacgc ccccgaagcc ttggcgtttt accaagaagt cggcaagctc aacgccgcca
     8641 acagcctgac cgctggcgaa gtcgaagtca tccagatcat cgccgcccgt accaaccaat
     8701 gcggtttttg cgtggcaggg cacaccaaac tcgcaaccct gaaaaaactc ctgtccgaac
     8761 aatccgtcaa agccgcgcgc gctttggcag caggcgaatt tgacgatgcc aaactcggcg
     8821 cgctcgccgc cttcacccaa gccgtaatgg cgaaaaaagg cgcggtatcc gatgacgaac
     8881 tcaaagcatt tttcgacgcg ggctacaacc agcagcaggc agttgaagtc gtgatgggcg
     8941 tagccttggc aaccctgtgc aactacgtca acaacctcgc ccaaaccgaa atcaaccccg
     9001 aattgcaggc ttacgcctga tacggcaaac cgcccgaata tcgggcggtt tttcaacccc
     9061 ccctcctcaa acaaaaacaa gccgccaagc ggcagggaaa gcagccgcgc atcaggcgcg
     9121 cccccgattc ccccgcaaac cttaaggaac aaagatgaac gcccaaaccc tgattgccaa
     9181 cgttgccgaa ctcgtcaaaa ccaagctcaa acccatagtg gacgacatcg accgcaaagg
     9241 atactacccc gaagcattta tgcgcgaact cggcgcaatc ggcggattcg gcgcagtcgg
     9301 gacagaagcc gaaggcggca acggcttagg cttggcaacg caaatcgccg ttttgcgcga
     9361 aatcggcaaa gaatgcggcg caacctcctt cagcgcgtgg tgtcaggcgg cttgcgcgtg
     9421 gtatctgcac caaacgccca accaagccgt caaagacaaa tacctcgccg acatcctgca
     9481 aggcagagta ttggcaggta ccggaatgtc caataccgtc aaacaccttg ccggcatcga
     9541 aaaacacaac cttcaagccg agcgcgcaga cggcggctac acagtcaacg gcgcgctgcc
     9601 gtgggtgtcc aacatcggcg aagaccacat ctgggcaaat accgcccaaa tcggcggcgg
     9661 ctacgtcatg tttatcaccg gcggacaatg ggaaggcgta agcctgcaaa actgccccga
     9721 attttgcgcc ctcgaaggta cgcgcacctt cagcctgaac ttcaaagacg tatttatccc
     9781 cgacgaagac atcatcgccg cgcccgaaca gtttgccgac tacatccaaa gcatcaaagc
     9841 aggtttcatc ctcctgcaaa tcggcatcgg cgcgggcgtg attgacggca gcctcggcat
     9901 catccgcctc gccaacatcg tcaacgccga agtcaaccgc tatctcgacg acggctacga
     9961 cagcctcaaa gcaaggttgg acggcgcatg ggcagaaacc gaacggctcg ccggtttggc
    10021 atggaacaac acgccggaca cattagcgac cctcaagctg cgcgaagccg ccgccgtact
    10081 ggcacttgcc gccgcccaat ccgccgccct gcattccggc gcaaaaggct acctgatgcg
    10141 cagtcccgcc caaaggcgcg tccgcgaagc aatgtttgtc gccatcgtaa cccccgcgat
    10201 caaacacctc cgaaaagaaa tagcggcaat cgaagccgca aaataaacag gcggaaaaaa
    10261 ccgaaacccc caccgcgtca ttcccgcgaa agcgggaatc cagcccccaa cgcaacagga
    10321 atccatcgga aaaaacagaa acccccaaac cgtcattccc gcaaaagcgg gaatccagcc
    10381 ccctaacgca acaggaatcc atcgaaaaaa ccgaaacctc caaaccgtca ttcccacgga
    10441 agtgggaatc cagtaaccga aaaaccacag gaatctatcg aaaaaaaccc caccccccaa
    10501 aaaaaccggg cggatacctc accatcctcc caaaccctga tttatagcgg atgaacaaaa
    10561 atcagggcaa ggcggcgaaa ccgcagacag tacaaatagt acgaaaccga ttcacttggt
    10621 gcttgagcac cttagagaat cgttctcttt gagctaaggc gaggcaacgc cgtaccggtt
    10681 tttgttcatc cgctatacaa aaaacaagga aacacaaatg gcgcaatata tgtgcggccc
    10741 ctgcggctgg atttacgatg aagaactcgg cgacccagaa cacggcatcc cccctgggac
    10801 aaagtttgaa gacattcccg acgactggaa atgccccgaa tgcggcgtag gtaaagaaga
    10861 tttctacctg ttggatttcg tgatatagcg gcagccgcac ccttagggaa aaccccgtca
    10921 tccggcgttc cgcctgcggc ggcagggaac gc
//
LOCUS       DAWGBY010000060        10793 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.060, whole genome shotgun sequence.
ACCESSION   DAWGBY010000060 DAWGBY010000000
VERSION     DAWGBY010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.060"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(109..1782)
                     /gene="recN"
                     /locus_tag="WHG62_001294"
     CDS             complement(109..1782)
                     /gene="recN"
                     /locus_tag="WHG62_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ1725395.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHSLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            complement(1966..2568)
                     /locus_tag="WHG62_001295"
     CDS             complement(1966..2568)
                     /locus_tag="WHG62_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ1725396.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLGLN
                     SLEELPPLTELGELVLPDLIEMQPTDEEEPETVPSDTLPN"
     gene            complement(2669..3610)
                     /gene="ylqF"
                     /locus_tag="WHG62_001296"
     CDS             complement(2669..3610)
                     /gene="ylqF"
                     /locus_tag="WHG62_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ1725397.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLGHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEEGGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            complement(3691..4545)
                     /gene="rapZ"
                     /locus_tag="WHG62_001297"
     CDS             complement(3691..4545)
                     /gene="rapZ"
                     /locus_tag="WHG62_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ1725398.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSDR"
     gene            complement(4526..5488)
                     /locus_tag="WHG62_001298"
     CDS             complement(4526..5488)
                     /locus_tag="WHG62_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ1725399.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQHNEDRPD"
     gene            complement(5490..5939)
                     /gene="ptsN"
                     /locus_tag="WHG62_001299"
     CDS             complement(5490..5939)
                     /gene="ptsN"
                     /locus_tag="WHG62_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ1725400.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            complement(6124..7014)
                     /gene="ubiA"
                     /locus_tag="WHG62_001300"
     CDS             complement(6124..7014)
                     /gene="ubiA"
                     /locus_tag="WHG62_001300"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ1725401.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVGKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVLPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            complement(7044..7520)
                     /locus_tag="WHG62_001301"
     CDS             complement(7044..7520)
                     /locus_tag="WHG62_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ1725402.1"
                     /translation="MEHLFGKWLPDLPAAISDGISLPMVRLLHTRSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDRIPVVEARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSVFEFAVAGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            complement(7535..8182)
                     /gene="bioD"
                     /locus_tag="WHG62_001302"
     CDS             complement(7535..8182)
                     /gene="bioD"
                     /locus_tag="WHG62_001302"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ1725403.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGVLAKQLLQQGKSVITQKPVQTGC
                     QNIADDIAVHRKIMGKPMQEADKQGLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QELAAQYEIVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLYSLVFNHIHDSRDAHIAQDSLNYLKCRLKADFSEAEWMELAKTDAV"
     gene            complement(8179..9480)
                     /gene="bioA"
                     /locus_tag="WHG62_001303"
     CDS             complement(8179..9480)
                     /gene="bioA"
                     /locus_tag="WHG62_001303"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ1725404.1"
                     /translation="MPSEHQHISSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQIKQMSHVMFGGLTHDPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPTSRFDDEWDGADLQPVRALFEADHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASIKLL
                     LSQDWQANIRRIESILKDRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     KGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            complement(9694..9933)
                     /locus_tag="WHG62_001304"
     CDS             complement(9694..9933)
                     /locus_tag="WHG62_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725405.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
     gene            complement(10193..10678)
                     /gene="fxsA"
                     /locus_tag="WHG62_001305"
     CDS             complement(10193..10678)
                     /gene="fxsA"
                     /locus_tag="WHG62_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ1725406.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAAGFAAGVL
                     MLRHTGLSGLLLASAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT         2545 a         2973 c         2676 g         2599 t
ORIGIN      
        1 gcacaatcac ttgttcaagt gattaagaaa gcgtgataat acggatttat ctgagttctg
       61 tctattgttt tagactttta tttttagtta ttttttaact gattgatttt aaaataaact
      121 atttttcgac gcaagttgca gcaattctgc cgcatgttgc cgcgtcgtat cggtaatgac
      181 ttctccgccc aacatacggg caacctcttc gatccgttgg atttcatcca atatactgat
      241 ttcgctgacg gtttgctctc cctcgctgtg cttgcgcacc cgccagtggt tttctccgca
      301 ggatgcgact tggggaaggt gggtaacggc aagcacctga tgttttctgc ccaacgcacg
      361 taatgccttg ccgaccattt cagccactcc ccctccaata ccggtatcga cctcatcaaa
      421 aatcagggtg ggaacttggg tatattggct ggcaacaacc tgtaaggcaa ggctgatacg
      481 cgccaattcg ccgccggagg caactttatt cagcggacgg ggcggattgc ctttgttggc
      541 ggcaacttga aattgaacct gctccaaact gtgtgccgtc ggcgacgagg gcaacaggac
      601 gatgtcgaaa cgtgcacctt tcatggcaag gtgttgcata tgctcggtcg tttcgccgct
      661 caaacgctct gccgcctgat ggcgcatggc agaaaggatg tgggcagctt cctgatattc
      721 ggcaaaattg tgggcaacat tatgctcgag cgcgtccaaa tcggcggcag cttgcaggct
      781 ttgcaggcgt tcttcgattt ctgccaactt ggcaggcaac tcttcaggct cgatccggta
      841 tttccgcgcc atccccatca gttcgcccat acgctgttcc tgtgccgcca attcattggg
      901 gttgatgtcg ctgcgacctg ccacatcgcg catattggca ctgatttcgc ccaattcggc
      961 ctcgatgctt gccaacatat tcaggctctc ggcaaagcgc ggctcgatgt tttgcagatt
     1021 ggccaatagt ttttgacatt gatagatatg gcgttggatg ccgttgtcgc cgtcaatctt
     1081 gcttccgact tcttcggcag cctgcaacag ctcggcagaa tgggcaaggc tgtcgtggct
     1141 ttggctgagg gcttcccatt cgccttgttt aatgtccaac tgattcaatt cgttaaactg
     1201 ccattccaga cgctcttgtt cgagtgcaat gttttctgcc tgttcctgcg cttcctgcaa
     1261 tgcttttttt gagtttgccc agttttgata aagctgcctg acggtttccg cctgcgccct
     1321 gctgcccgca aatgcgtcca acaattcgcg ctgagcggct tcctgattaa gcgaatgatg
     1381 ggcgttttgc ccgtggatgt cgataagctg gctgccgacg gctttgagtt gcgccaaggt
     1441 agcggcctga ttgttgataa agctgcggct tttgcctttg gcatcgataa tgcggcggat
     1501 actgagttct tcttctccgt cgtttaaaag cccctgttca tacaattctg cttttaaaac
     1561 aggtaaatgg gaaatatcaa acaacgccga caactgcgct tcttttgcgc cgctgcggac
     1621 ttggctgtaa tcggctttat cgcccaacag cagaccaatc gcatccaaag taatggactt
     1681 gcccgcgcca gtttctccgg tcaatacggt aaagccgctt tgaaaatcca gattcagatt
     1741 ttcgacaatg acaaaatcac gcaaagaaag tgttagaagc atcgtgagga ttccttagca
     1801 attctaccga caaaagcaat atcaacttta gatatacgaa ttataactaa gattttttaa
     1861 attaaaaata agtttttcct taatttttct tagtgcttgt ttttatctgc ttatttgttg
     1921 caatgccgtc tgaagcaatg tgcgtttcag acggcatttg gaatttcagt tgggcagggt
     1981 atcggacggt acggtttccg gctcttcttc atccgtaggc tgcatttcta tcaaatcggg
     2041 caaaaccagt tcgcccagtt cggtcagcgg cggcagttct tccaagctgt tcaaacccaa
     2101 atcgctgagg aacgttgccg ttgtcgccca caatgcgggt tttcccaatg tgtcccgatg
     2161 tccgatgact tcaatccacc cccgatcctg caaggtctgc atcacgttct gcgacaccgc
     2221 cacgccgcgt atgccctcga tgtcgccgcg cgttacgggc tgctggtagg cgataatcgc
     2281 cagtgtttcc atcacggcgc gggagtagcg cggcgcacgc tgttcttgca ggctgcccag
     2341 ccgctcgaat gccgtctgaa caatctgaaa acgccagccc tcttgcgtat gcaccagttg
     2401 caacgcccta tcctgccaac gcgttttcaa ctgcgccaac acatcaatca gtttgtcttg
     2461 cgacaacggc ggcacacaca gttcgcgcat agatttttcg gtcagcggtt cggtttgggt
     2521 cagcagtgcg gcttcaatca gcgcgtcggg agaaattttg tcggtcatac gggtatccgt
     2581 gctgaaacgg catgggtttg gatatgccgt ctgaaatcgg ttggagtaga gagaagctgc
     2641 ctgaaaaata tttttcagac ggcattcttt atgcttccga aggcttctgc cctttacgct
     2701 ctgcttttct ggcttcgcgt atggctttga gttcggcttc tttctgacgg gcttttttga
     2761 gccaagtttc ccattggttc ggcgtttcga gggtgattct gccgattttg ccttcacgga
     2821 agtcggtaag gatgttttcg gcggcttttt ggtagttgat ccgtccgccg ctgaggactg
     2881 cgccgcgttt tttggctatc cattcgagcc aaacgttttc gtcccagtgg ctgctggggt
     2941 ctttgtcggc ttggtagcgt tcttgcaaca tagggaggta gtggcggcgg aggtagtcta
     3001 aaagttcgag ggcgacttct tcttcgtcca acgcgttgcg tccgactgcg ccgccggcgg
     3061 caaggttgta gccgccttct tcgacgatga ttttcggcca cagcattccg ggggtgtcgt
     3121 agagccagaa gtcatcggcg aggaagaggc gttgttcggc tttggtgatg ccgggttcgt
     3181 tgccggtttt ggcggatttt ttgcctatca tgccgttgat gagggtggac ttgccaacgt
     3241 tggggatgcc gcagatgagg acgcgcaggg gtttatctat gccttgccgg tggggaatca
     3301 tcgcgcggca ggcttgggtg attttgccgt gtgcgccggt ttcggaggaa tcgagggcaa
     3361 tggcgcgcgt gtcggggcgg ctgttgtagt ggccaagcca gacctttgtg cgttcggggt
     3421 cggcaagatc ttgtttattt aggattttaa gtttgggttt gcctttggaa agctgggcaa
     3481 gcagggggtt ttcgctggag gcgggcatac gcgcgtccag catttcaatc accatatcaa
     3541 cgctttttgc acgctcggcg atggcttttt tcgccttgtt catatggccg ggaaaccatt
     3601 ggattgccat gtctgttctt tcttttcaat atttgaaatg ccgtctgaaa cggaggacgg
     3661 ggtttcagac ggcataatgg tttgacggaa ttagcggtct gacaggtttt gcgcctgtct
     3721 gtgccgtatc agcaattcat aacgcccttt caaccttcgg gcgagttttt cgacaatata
     3781 gaccgaacgg tgctgtcctc ccgtgcaacc gatggcgacg gtaacgtagc tcctgctttc
     3841 atcctccaaa cgcggtaacc aatgcgtaac aaacctttcg atgtcgtcaa ccatttcctg
     3901 cacaagcggc tgtccgtcca aataatccca aacgggcttg tccataccgg tgtaaggcct
     3961 caactcggga tcgtaatacg ggttgggcag actgcgcata tcgaacataa aatccgcgtt
     4021 gttcggcaca ccgtatttga acccgaagga ctccaaaatc accagcagcc cggtacgttc
     4081 gaccttcagc cactgccgga ctgcatggcg gagctgttgg gcattcatct tggaagtgtc
     4141 gatacaatag gcgatttctt taagcgggaa cagccattcc cgttctttct ttaagctttc
     4201 caacaaggtc atatcctgat tactcagagg gtggcctcgc ctggtttcgg aaaaccggcg
     4261 gaccaacacg ctttcttccg cctcgacaaa caaaacttca accctgtgcc ccagtccgcg
     4321 cagagaggca atctgttccc gcgcctgtcc gatgtctatg ccggaacgca catcgacgct
     4381 gaccgccaat tcggtttcgt ccgcacgctc gatatgatac gacaccagcg cgggcaacat
     4441 ttccaaaggc aaattgtcca cgcagaaata acccgaatct tccatttggc gcagtgcgac
     4501 ggacttgccc gaaccggaca ggccgctaat caggacgatc ttcattgtgt tgttcgtttt
     4561 ctttaagttg cgtctgatgg cgttccaaaa attcgcgcgt actgtcctta ccgcgcaact
     4621 gcaaaatgta attgcgtacc gccgcctcaa ccaaaacggc gaggttgcgt ccgacggcga
     4681 cgggcagcgt aaccgaacgg acgttgacgt tgaggatgga ttcggtttcg gtgcggatgc
     4741 tcaaccggtc aagctgcttc atatactcgt cgtccgcctc gactaaattg ataatgagtt
     4801 gcaggatttt tttggggcgg atggaagttt cgccgaaaat atggcggata ttgagtatcc
     4861 ccaagccgcg cacttccaaa aaatcgcgca gcataggcga acaacgccct tccagcgttt
     4921 ccgggccgat gcggaacagc tcgaccgcat cgtcggcaat caggctgtgg ccgcgcgaaa
     4981 tcagttccaa tgccaattcg ctcttaccca ggccggaatg cccggtaatc agcacgccga
     5041 tttcaaacac atcgagaaat acgccgtgtt tgacggacga tgccgccaag gtgcgttgca
     5101 ggtaaatccg caacacgtcc atcagatagg ggctttcgag tttggaagtc agcagtggaa
     5161 tatcgttttt atgacaatag tcgcgcagtc ccggggaaac cggcaagccg tttgccacaa
     5221 tgaccaaaga catagaaatg tcgaacaggt cgccgaactg ataacccgtt tcccccgatt
     5281 cgagacggtt cagatattcc gattccgcca aaccgaccac ttggatttgg ttggggtgga
     5341 tgaaattcag gtgtccgacc aaagcgagga cgggcttgtc cgcctctacg ccgatacggt
     5401 tgtccgcacc cgaattgccg gcggcccagg caagttgcag tttgtattgg ttgtcgtcaa
     5461 acagtcggcg gacggaaata ctgggcatat tattcttcag tcaggatggc gcgggcttct
     5521 tccgcagaag aaacggtcat cagcgattct ctgatgcttt tttgggaaaa cttgccggcc
     5581 agtttggaca atacctccaa atgctcgccc gttgcattct caggaaccag caagataaaa
     5641 accagggaaa ccggtttgcc gtccggtgcg tcaaatccga cgggttcgcg cgtgcggatg
     5701 aacgcgcccg tcgcctgctt cacgccggca tgacggccgt gcgggatggc aacgccctgc
     5761 cccaaaccgg tcgaaccgag tttttcacgg gcaaaaagac attcgaaaac atcagcatgg
     5821 gacaatgagg attcgcgttc caaaagcagg cctgcttcct caaacagcct ttttttactg
     5881 cccacctcca tatccaaaac aatatgggac aaaggcaaaa tttcgccgat aaggctcata
     5941 agcttctctt ttcagacatc gcaaaacaga aagattgtac cgactgccgg ggcaaatctc
     6001 aatcccgcat acggtacggg ctgacataac acagcgtttt aaaaacatat tttaacgctt
     6061 ttcggcacag atagaaatgc cgtccaaagc ggtttacggc tcttcagacg gcattgccct
     6121 gccttatttc gcgaaaaacg tatgggcaaa aatggcggta aaccacaccc aaccaattct
     6181 gttgtttgcc aaaaacgttt caaaacagat ttgccggacg cggcttttga tggcggcata
     6241 ttggcggtat tgcagcagca ggacgatggg gattgccgtc caatatgccc atgccgcacc
     6301 gataaccgca cccaatactg ccatcagcag ggtaaagcct ccgtgacaca gcataacggc
     6361 ggcgatgtcg taacgcccga acgtgacggc ggaggttttg atgccgattt tcaaatcgtc
     6421 ttctttgtcc gccattgcat aaaccgtgtc atacgccaga gtccataaca cattggcggc
     6481 aaagagtatc cacgcttgag gcagcacgtt tccggcaacg gcggcaaacg ccatcgggat
     6541 accgaaggaa aaggcaagcc cgagatagag ttggggaatc ggaaaaaaac gtttggtaaa
     6601 cgggtaagtc agcgcaagaa acagcgcggg caggctcatc agccaagtca gatgattcag
     6661 cggaatcagg cacaatgcgg caagcaggca caaaaatgcc gtcagcagca gcgcttcttt
     6721 ttttccgacc cgaccctgtg cgaacggacg gtttttggtg cgctcgacag caccgtcaaa
     6781 atcgcggtcg gcaaaatcgt tgatgacgca accggcactc cgcattaaaa acgtgccgat
     6841 tgtaaacgcc gccaataccg ccaaatcggg aatgccgtct gaagccagcc acaatgccca
     6901 gtaggtcggc cacagcaaaa gcagcgtccc aatgggcttg tccgcccgca tcaggcgcag
     6961 gtacacatcc aaacggtcgg acagtcgtaa aaataaaggg gatttaggat tcatattgcc
     7021 gcacagcttg aaaaaacggt attttatccg ataaagcgtt tcagttcggg cagaaaatac
     7081 tcggtcagca gcatttcctc gccgtgacgg gaaaaccgag aacgccgcgc ggcaaagtac
     7141 cgtccgcatc cttcgccggc aacggcaaac tcaaacaccg aacgcgcccc ttccaaatcg
     7201 gcttgaaaca gacgctcgcc caaaggacgc gtgccgcagt ccaaaatgtt ttgccaaaac
     7261 gccgaaccga tacggcattc gctccttgcc tcaacaacag ggatacggtc cagcttcaac
     7321 aaaacttcgc gcaccagcct ccctccgcat tccgtctcca attcgcccag tttcagcagt
     7381 tccaccgaaa atgtatgcgg caaggcgcgc aatgcggcgg tcagcgaccg ggtgtgcagc
     7441 agccgcacca tcggcaggct gatgccgtct gaaatggcgg cgggcaagtc gggcagccat
     7501 ttcccaaata ggtgttccat atttttccca atctttatac cgcgtctgtt tttgccaact
     7561 ccatccattc cgcttcggaa aaatcggctt tcagacggca tttcaagtag ttcaggctgt
     7621 cttgggcgat gtgtgcgtcg cggctgtcgt ggatgtggtt gaacacgagg ctgtacaagc
     7681 gaatgccgta ttgtttgagc gctgcgaaac tgagtaaagt gtggttgata ctgccaagcc
     7741 gtccgctggt aacgaggatg acgggatagc cttgctgacg gatataatca atggttaaca
     7801 ggttttccgt cagcggaacc atcaatccgc ccgcgccttc gaccaagacg atttcatatt
     7861 gcgccgccaa ttcttgtgtg gcggtgcgga ttttgtccaa gtccaaagcc ctgccgtcca
     7921 gacgggcggc gagatggggc gaagctggat aactgaagat ttcaggcatg gtcagccctt
     7981 gtttgtcggc ttcctgcatg ggtttaccca tgattttacg atggacggcg atgtcgtcgg
     8041 caatgttttg gcaaccggtt tgcacgggct tttgcgtaat cacgcttttg ccctgctgca
     8101 acaattgttt tgccaacacg ccggtggcga cggttttgcc gatgtccgtg tctatgccgc
     8161 tgacgaagta aacgcctttc atttgctgtg ttccttcaag atttgcacgg ttttgtcggc
     8221 aagtttggtc aaaacgccgt ctgaaatgat gtaaggcggc atcagataca ccaacctgcc
     8281 gaacgggcgc acccaaatgc ccttcgccac gcagtccgct tgaaaacgcg ccatatccac
     8341 gcctttatcc agctcgatca cgccgatggc acccaaaacg cgtacgtctt tcacgccgcg
     8401 aatgtcccat gcggctttca gacggtcttt taagatgctt tcaatgcggc ggatatttgc
     8461 ctgccaatct tgagacaaaa gcagtttgat cgaagcgcag gcaacggcac acgccagcgg
     8521 gtttgccata aatgtcgggc cgtgcataaa cacgcccgct tcgccgcgcg aaatcgtttc
     8581 ggtaactttt tgcgaagtga ttgctgccgc caacgtcata tagccgccgc tcaagccctt
     8641 gccgatacac ataatatccg gcacgacctc cgcgtgttcg caggcaaaca tcttgcccgt
     8701 gcgcccgaat ccggtagcga tttcgtcaaa aatcaacacg atatcaaatt cgtcgcacaa
     8761 atcacgcaat ccgcgaagat actgcggatg ataaaaatac atgccgcctg cgccctgcac
     8821 gaccggttcc aaaataaagg cggcaatatc cgcatgatcc gcttcaaaca aggcgcggac
     8881 aggctgcaaa tccgccccgt cccattcatc atcgaaacgg cttgtcgggt tatcgacaaa
     8941 ataacgctgc ggcaacgcgc tgccgaaaat atggtgcatc cccgtttccg gatcgcagac
     9001 ggacatcgcg ttccaagtat cgccgtgata cccgcggcgc accgtcgcga tattctgctt
     9061 cgccgtcaaa ccccgcgcct gctggtattg caccgccatt ttcaacgcga cttctaccga
     9121 aaccgaaccc gaatccgcat aaaaaatacg gtccagcccc tgcggcaaaa ttccgaccaa
     9181 caacttgccc agttccaccg caggatcgtg cgtcaaaccg ccaaacatta catgcgacat
     9241 ttgcttaatc tgcgtctcaa ccgcctgatt caaaacagga tgattgtaac cgtgtatcgc
     9301 acaccaccaa gacgacatcc cgtcaatcaa ccgcgtgccg tccgccaatt cgataaacac
     9361 cccttctgca cgtttgacag gataaacggg aagcggatcg gtcatggaag tatagggatg
     9421 aagcagatgg gtacggtcga aatcaagcaa tgatgatatg tgttgatgtt cagacggcat
     9481 aagtttctct cttttcttct tactgtattc aaacgcaaac gcgtattcta ctccgacaga
     9541 ccgtttccca cacctctcca tccgtttcgg gcgcaaaacc gcgaaacaaa tcgttccgca
     9601 acataagcgc acaccgtttc gcattcctca agcccgattg gaatcagacg gcccaacgcc
     9661 caataccgtt tcacgcagcc tccgcccaac gcttcaatca gtcatagaca aaacggcaat
     9721 ccatacgata cagatcatag caacagccat cgcaacagcg ttggcaaaat caggggactc
     9781 cgacataggc gcatagcatc tgccgatgca cggctcctca ttcggctcta tgaataccat
     9841 acccatcaca aaatccaccg ccaaaaccag gcacggcttc ttatacttat gatagatttc
     9901 caccatcctg ccccatatat cccaaacatt cataccgcat atcccgcagg caacaaattc
     9961 cgattgaagg ttacagccct attttatagt ggattaacaa aaatcaggac aaggcaacga
    10021 agccgcagac agtacaaata gtacggaacc gattcacttg gtgcttcagc accttagaga
    10081 atcgttctct ttgagctaag gcgaggtaac gccgtactgg tttttgttaa tccactatat
    10141 tttcaaaccg gaaaaatgcc gtctgaacct tcagacggca ttccattcac atttattcgt
    10201 cttttttgtg ttcgatggcg tttcgggaac gattgccgcc gtaaggctct tcaaccgtat
    10261 attccccctc gataatatcg tcatcgcggg aaaagccctc ttttctgccc gattggttca
    10321 tgttgaaaaa attttccgca cctcctgcct gcaacactgc acctccctta aacggcagca
    10381 gcagcaacac cgccaacacc gaggatacga atcccggact catcagacac accgccgcca
    10441 ccgtataacg gataggccac aacatctgat aaacggatac cctcccgccg cttctcattg
    10501 ccgcgctcgc caataaaaga ccggacagcc ccgtatgcct gagcatcagc acaccggcgg
    10561 caaaacctgc cgccatcaaa aacaacgtcc agccgccgcc caaccaatcg gcaacccaca
    10621 caatcgacat aatctccaaa aacagcagca ccaaaaaacc gataccgaaa aatctcattg
    10681 accgtcatcc ttatatttaa gtaaacagca aaccgcccga acaggactcc aagcgacctg
    10741 cctgtaaatg attacaaaac catgtgcttc aagccgaaac aatgtgaaat cac
//
LOCUS       DAWGBY010000061        10469 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.061, whole genome shotgun sequence.
ACCESSION   DAWGBY010000061 DAWGBY010000000
VERSION     DAWGBY010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10469
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.061"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(135..1352)
                     /locus_tag="WHG62_001306"
     CDS             complement(135..1352)
                     /locus_tag="WHG62_001306"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ1725407.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLTAGKVVIVAGFQGISSEGNISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAIADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1554..2282)
                     /gene="rph"
                     /locus_tag="WHG62_001307"
     CDS             complement(1554..2282)
                     /gene="rph"
                     /locus_tag="WHG62_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ1725408.1"
                     /translation="MPDYIRTSRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2364..2828)
                     /locus_tag="WHG62_001308"
     CDS             complement(2364..2828)
                     /locus_tag="WHG62_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ1725409.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNSARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3045..3821
                     /locus_tag="WHG62_001309"
     CDS             3045..3821
                     /locus_tag="WHG62_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ1725410.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERITQINPQCEVF
                     EIEDFVTEDNLAECFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKAKMRVPCVFSTENIVPPQSGAAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIAGKK"
     gene            4064..4918
                     /locus_tag="WHG62_001310"
     CDS             4064..4918
                     /locus_tag="WHG62_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ1725411.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            4959..6167
                     /gene="pncB"
                     /locus_tag="WHG62_001311"
     CDS             4959..6167
                     /gene="pncB"
                     /locus_tag="WHG62_001311"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ1725412.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDDPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLAFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6259..7977
                     /gene="argS"
                     /locus_tag="WHG62_001312"
     CDS             6259..7977
                     /gene="argS"
                     /locus_tag="WHG62_001312"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ1725413.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIADSPIVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQAVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDANAPTVLTEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            8516..9934
                     /locus_tag="WHG62_001313"
     CDS             8516..9934
                     /locus_tag="WHG62_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ1725414.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2420 a         3064 c         2631 g         2354 t
ORIGIN      
        1 ttaatccact ataaatttaa tccactatat tttttgttcc aaagtcaaaa tatgccgtcc
       61 gaacattcgg gcggcagaca aaacggcact gcccgataaa ggcagtgccg ttgtccgttt
      121 caaaccgtga aacatcagcc caaattaaag gctttatgca ataccctggt tgccagttcc
      181 atgtattttt catcaatcaa tacggaaact ttgatttcgg aggtggaaat catttggatg
      241 ttgataccct cttcggcgag cgtgcggaag attttggcgg ctacaccgac gtgcgaacgc
      301 atacccaaac cgactgcgga gactttgcat acggtgtcgt cgccatcaat agaagccgcg
      361 ccgatactgt cttggcgttc cgacaggatt tccaaagtct gcttgtaatc gccgcgcggt
      421 acggtaaagg aaaaatcggt tgtgccttcg ctgccgacat tttggataat catatcgact
      481 tcgatgttgg catcggcgat cgcgcctaaa atctgatagg caacgccggg tttgtcgggt
      541 acgccgcgca cgttgatgcg ggcttggttt ttatcgaatg cgataccggt tacggcagct
      601 ctttccatgt tgtcgtcctc ttcaaaggta attaaggtgc cgttgccgcc gtcttgcagg
      661 ctgctcagta cgcgcaggcg cactttgtac tttccggcga attctactga acggatttgc
      721 aagactttcg agccgaggct tgccaattcg atcatttctt caaatgtaac cgtatccatg
      781 cggcgcgctt cgggtacgac gcgcggatcg gtggtgtaca cgccgtccac gtcggtatag
      841 atttggcatt cgtccgcttt gagggctgcg gcgagcgcaa cggcggaagt gtcggaaccg
      901 ccgcgtccga gcgtggaaat attaccttca ctgctgatgc cttggaagcc ggcaacgatg
      961 acgactttgc cggcggtaag gtcggcacgc attttttcgt catcaatgct ttcgatgcgg
     1021 gctttggtgt gggcggtatc ggttttgagg gcgacctgcc agcctgtgta gcttttggca
     1081 tccacgccga tgtctttcaa tgccatcgcc aaaaggccga tggttacttg ttcgccggtg
     1141 gacaaaacca cgtccaattc gcgcggatcg ggatgctcct gcatttcgtg cgccaacgcg
     1201 accaggcggt tggtttcacc gctcatggcg gatacgacga cgacaatgtc gtgtccttcg
     1261 gcgcgggctt tggcgacacg tttggccacg tttttaatgc gttcgggcga gcctacggat
     1321 gtgccgccgt atttgtgtac gattaacgcc atgtttcgtg ctttcttgtg tgggattggt
     1381 cgggcagcat ggtttgctgg aaaagcggct attattacta ttttttacat gaagttcaag
     1441 aacggactgc gctttcccgc ctgccgtttg acagcggtca gcgaaaaacc tgttctttca
     1501 gattgttgac aaaatgccgt ctgaacggtt ttcagacggc atccggacga caatcaggcg
     1561 gcggacaacg cattttgctg gtgttgcagc agttcgccta tgcctttttg cgccagtgca
     1621 accagtttgc ccaattcgtc caaactgaac ggcgcgtctt ccgccgtacc ttggatttcg
     1681 atgatttttc ccgatgcggt catgacgata ttcacatcac tgtcgcaacc ggagtcttcg
     1741 ggataatcca aatccaaaag cggcacgccg ttcactacgc ctactgacac agcggcaacg
     1801 gcttcgcgga tggggttttc actcaaaatg ccgtctgaaa ccagtttgcc gacggcgatt
     1861 tgcagcgcga caaacgcacc ggtaatcgaa gccgtgcgcg taccgccatc tgcctgaatc
     1921 acatcgcagt caatcaagat ttgtcgttcg ccgagttttt ccatatccac gaccgcgcgt
     1981 agcgaacgcc cgataaggcg ttggatttct tgtgtgcgcc cggactgttt gcccgccgaa
     2041 gcttcgcggc gcatccggga agcagttgag gcaggcagca tcccgtattc tgcggttacc
     2101 cagccttggt ttttgccgcg caaaaacggt gggacatttt cgtctatgga agcggtacaa
     2161 atcactttgg tattaccgca ttcaataagg cacgaaccgt ccgtatgcgg caggaaatga
     2221 ggggtgattt tgatatcgcg caggctgtcg gcggcgcgtg aggtgcggat gtaatcaggc
     2281 atactgccct cccgttaaaa acagataaat taaaaagcct taaatatgaa aaatcacatt
     2341 taaggccttc aaactgaaaa tttctacgcc tcttcggctt tgctgcggat aatcaaaagc
     2401 ggcaggtggc tttggcgcat taccgtttcg gcaaaactgc ccattaaaag gtgcatcagc
     2461 ccggtacgtc cgtgcgtacc caacaccagc aagtcggcac cgttttcatc ggcataatca
     2521 accaaatcct gcgccatttc acgcgcaccc ttattggcaa ccagcaggtg tttgacggta
     2581 ttttccacac ccagttcccg ggcggtgcgc tcggcggcat ccaaaacttc gttgccttgc
     2641 gcgacggcgg cggcttcgta gctttcgtgt tgcaaaaatt cgggggcgag cgccatatat
     2701 tcggcaggat tggcaacgtg caccaaagtc aggcgcgcgc tgttgactcc tgcaagctcg
     2761 gcggcatgtt tcagggcatt gatggacgtt tcactgccgt caacggcaac gaccagatgt
     2821 ttgtacatat cgtattctcc ttttgcaccg cctcgcggtg ccctcttgtc ggatgggcgc
     2881 agggacagtt tgcgccgttt cattatagac ccgccgtcgg gctttataca acagccgaac
     2941 agcccgaccg ctttccagta taatatgccg cttccgtgca gtcaggcatt ttttgccggc
     3001 tttcgttcac tttttgattt gacgcaatct tgcaggattc gaccatgtcc gacaacgctt
     3061 tgacctcttc gcgacgcttc ggcggcatcg ccagactcta cggagactct gccttggcgc
     3121 acttttcaca ggcacacgtc tgcgtagtcg gcgtgggcgg tgtcggctcg tgggcggtcg
     3181 aggctttggc gcggacgggc atcggacgtt tgactttgat tgatttggac aacgttgccg
     3241 aatcgaatgt caaccgccag ctgcacgccc taaccggcga cttcggcaaa gcaaaagtta
     3301 ccgccttgcg cgaacgcatt acacaaatca atccgcaatg cgaagtgttt gaaattgaag
     3361 atttcgttac cgaagacaat ttggcggaat gcttcggaaa aggttttgat ttcgtcattg
     3421 acgcgatcga ccaagtgcgc gtcaaagcgg caatggcggc ttattttgtg gaacgcaaac
     3481 aaccgtttgt cctcagcggc ggcgcaggcg gacagaaaaa tcccgcccta attcaaaccg
     3541 ccgatttgag ccgcgtaacc cacgacccgc tgcttgccaa cctgcgctac accttgcgga
     3601 aacgctacgg cttcagccgc gatacgaaag ccaaaatgcg cgtgccgtgc gtgttctcaa
     3661 ccgaaaatat cgtgccgccg caatcgggcg cggcgtgttc tgccgatgcc gcaccacagg
     3721 gcttgtcgtg cgccggctac ggtgcaagca tgctcgttac cgcttcgttc gggctatatt
     3781 gcgcacaggc ggcggtggaa cacatcgcag gcaaaaaata aaatgccgtc tgaaacagga
     3841 ttcagacggc atttgaacaa acgcggcaat caagctgtcg gttcagaaaa accaacatcg
     3901 gcacgcctaa aaccgtattc acaacctgct ccttttcaaa acatttgcat ttaaaagccg
     3961 ttataatgcc gtctgaacat ctgcccgacc acattatgcg tgaatgtcgg cagattgttt
     4021 tcttttgtaa acttatatta aaatccactt accgattcac gccatgccgc ccatccctgc
     4081 cccatctgca ccatccgagc acactgtcgc atgggtattc ggccaacccg ttaccgattt
     4141 gccccaggat ttgtttattc cgcccgatgc attgaaagtc gtattgggca gcttccaagg
     4201 ccctttggat ctactgctgt atctgatccg caaacagaat atcgacgtac tggatattcc
     4261 gatggtgaag attaccgagc agtatctgca ctacatcgcc caaatagaaa cctatcagtt
     4321 tgatttggcg gcggaatatc ttttgatggc agcaatgctg attgaaatca aatcgcgcct
     4381 gctgctgccg cgtaccgaaa ccgtcgaaga cgaagaagcc gacccgcgtg ccgagttggt
     4441 gcgccgcctg ctggcttacg aacagatgaa gctggcggcg cagggtttgg acgcgctgcc
     4501 ccgagccgga cgggatttcg cgtgggctta cctgccgctg gaaattgccg tcgaagccaa
     4561 gctgcccgaa gtctatatta ccgacttgac gcaagcgtgg ctgggtattt tgtctcgggc
     4621 aaaacacacg cgcagccacg aagtaatcaa agaaaccatc tccgtgcgcg cgcaaatgac
     4681 ggcaatcctg cgccgtttga acggacacgg gatatgcagg tttcacgacc tgttcaatcc
     4741 cgaacagggc gcggcttacg tggtcgtcaa cttcatcgca ctgttggagc ttgccaaaga
     4801 aggtttggtc ggaatcgtac aggaagtcgg tttcggagaa atccgaatca gcctcaatca
     4861 tgagggggca cattcagacg gcatttccgg cacacggggc gggcgcgatg tgttctaata
     4921 cgccccaagc cgccaccaaa aatcgggaga cacgccatat gaccggcatc atacattcgc
     4981 tgcttgacac cgacctctac aaattcacta tgctgcaagt ggttctgcac cagtttccgc
     5041 agacgcacag cctttacgaa ttccgctgcc gcaacgcctc gaccgtctat ccgcttgccg
     5101 acatcaagga agacttggaa gccgaactcg acgcgctctg ccggctgcgc ttcacccacg
     5161 acgaactcgg ctatctgcgc tccctgcgtt tcatcaaaag cgactttgtc gattatctcg
     5221 aactcttcca gctccaacgc cgctttgtcg aaatcggcac agacgataaa gaccgtctga
     5281 acatccgtat cgaaggtccg atgatacagg cgatgttttt tgaaatcttc atcctcgcca
     5341 ttgtcaacga actttacttc cgccggctgg aaacccctgc cgttatcgaa gaaggtgaac
     5401 gccggcttca agccaaagcc gcgcgcctca aagaaatcgc cgccgcacaa aaccccgacg
     5461 atccgccctt cctgatttcc gacttcggca cgcgccgccg ctacaagctc gcgtggcagg
     5521 aacacgtcat ccgcaccctg ctcgaagccg ccccaagcat cgtgcgcggc accagcaatg
     5581 tctttctcgc caaaaaactc ggcatcaccc ccatcggcac catggcgcac gagttcctgc
     5641 aggcattcca ggccctcgac gtacgcctgc ggaatttcca aaaggccgcg ctcgaaagct
     5701 gggtgcacga ataccggggc gatttgggcg ttgccctgac cgacgtggtc ggtatggatg
     5761 ccttcctgcg cgatttcgac ctctatttcg ccaaactttt cgacgggctg cgccacgaca
     5821 gcggcgaccc ttacgtttgg ggcgacaaag cctacgccca ctatcaaaag ctcaaaatcg
     5881 acagccgcac caaaatgctg gccttctccg acgggctgga catcgaacgc tcttgggcat
     5941 tacaccaata tttcaaagac cgcttcaaaa ccggcttcgg catcggcacc aacctcacca
     6001 acgatatggg gcatacgccc ttgaatatcg tcttaaaact ggtcgaatgc aacgggcagt
     6061 ccgtcgccaa gctgtccgac tctccgggca aaaccatgac caacaacagc accttcctcg
     6121 cctacctgcg ccaagtgttc gacgtacccg aacccgaaac gccgtaaacc ggcagaaaaa
     6181 gcgcacaatt cctgtttctg ccgcataaaa tcttttaaaa taccgcctga tttgaattta
     6241 accgaaagac cgaacttcat gaacctacat caaaccgtcg aacacgaagc cgccgccgcc
     6301 tttgccgccg caggcatcgc cgacagccct attgttttgc agccgaccaa aaacgccgaa
     6361 cacggcgatt tccaaatcaa cggcgtgatg ggtgcggcga aaaaagccaa acaaaacccg
     6421 cgcgagttgg cgcaaaaggt cgccgacgca ttggcaggca acgccgtcat cgaaagcgcg
     6481 gaagtcgccg gtcccggttt tatcaacctg cgcctgcgcc ccgaatttct cgcgcaaaac
     6541 attcagacgg ccttgaacga cgcacgtttc ggcgtggcaa aaaccgacaa accgcaaacc
     6601 gtcgttatcg actattcttc gcccaatctg gcgaaggaaa tgcacgtcgg ccacctgcgt
     6661 tccagcatca tcggcgacag catttcgcgc gtgttagaat ttatgggcaa taccgttatc
     6721 cgtcaaaacc acgtcggcga ctggggtacg cagtttggca tgttggtcgc ttatttggtc
     6781 gagcagcaaa aagacaatgc cgcattcgag ctggcggatt tggagcagtt ttaccgcgcc
     6841 gccaaagtgc gctttgacga agaccccgcc tttgccgaca ccgcgcgcga atacgttgtg
     6901 aagctgcaag gcggcgatga aaccgttttg gcattgtgga aacagtttgt cgatatttcg
     6961 ctctcgcacg cccaagccgt ttacgacacg ctgggcttga agctgcgccc tgaagacgtg
     7021 gcaggcgaat cgaaatacaa cgacgatttg caagccgtgg tcgatgattt ggttcaaaaa
     7081 ggcttggcgg tcgaagacga cggcgcgaaa gtcgtgttct tggacgagtt taaaaacaaa
     7141 gaaggcgaac ccgccgcatt tatcgtgcaa aaacaaggcg gcggcttcct ttatgcttcc
     7201 accgatttgg cgtgtctgcg ctaccgtgtc ggcacgcttc atgccgaccg cctgctgtac
     7261 gtcgtcgacc accgccaagc cctgcacttt gagcaactct ttaccacttc acgcaaagcc
     7321 ggctatctgc cggaaaacgt cggcgcggca tttgtcggct tcggcacgat gatgggcaaa
     7381 gacggcaaac cgttcaaaac acgcagcggc gacaccgtga aactggtcga tctgctgacc
     7441 gaagccgtcg aacgcgccac cgctttggtg aaagaaaaaa atcccgaatt gggtgcggac
     7501 gaagccgcta aaatcggcaa aaccgtcggc atcggctcaa tcaaatacgc cgatttgagc
     7561 aaaaaccgca ccagcgatta tgtgttcgac tgggacgcca tgctctcgtt tgaaggcaac
     7621 accgccccct atctgcaata cgcctacacc cgcgtgcaaa gcgtgttccg caaagcaggc
     7681 gaatgggatg caaatgcgcc aaccgttttg accgaaccgc tggaaaaaca gcttgccgcc
     7741 gagctgctga aatttgaaga cgtactgcaa agcgtggcgg acacggcgta tccgcactac
     7801 ctcgccgcct acctctatca aattgcgacc ctgttcagcc gcttctacga agcctgtccg
     7861 atactcaaag ccgaaggcgc aagccgcaac agccgcctgc aactggcgaa gctgaccggc
     7921 gacacgctga aacaaggctt ggatttgctg ggcatcgatg tgttggacgt aatgtaaaac
     7981 cgcaccgccc gattgcggac aacagcccca ccatccttat ccgaatctga aaaaagcggc
     8041 gcgatacacc gtatccgccg cccctcccaa aatgcgaaac aaacaaacgc caagcaagca
     8101 agcaagcaag caagcaagca agcaaaaaat tataaccccc cttactgccg acgcacgcac
     8161 tttccgcgcg gcgcattccc cttttcccgc ccctcaaacc cgccttttct tcaggcaggg
     8221 tttcagccca cctcctttcc ctgttttcct ttccccgaca cgcatgcgcg ccccctgccg
     8281 caccgtgccg cattttcgcg cccggacggc atcgttccgc catccggttc tctgttttaa
     8341 atacccctgt ttcagaaaga aatgcagatg tttcaacaca caggacgaca cataaagcac
     8401 cgccctatgt gttgccctga tttggaaggg gttacgcctc ccaaataaag tctgatcctg
     8461 ccgccccgaa ggacagatgt ccgagtggcg aagtttcaac cgaaaaggaa atacgatgaa
     8521 tattcacacc ctgctctcca aacaatggac gctgccgcca ttcctgccga aacggctgct
     8581 gctgtccctg ctgatactgc ttgcccccaa tgcggtgttt tgggttttgg cactgctgac
     8641 cgccaccgcc cgcccgattg tcaatttgga ctatcttccc gccgcgctgc tgatcgccct
     8701 gccttggcgt ttcgtcaaaa ttgccggcgt attggcgttt tggctggcgg ttttgtttga
     8761 cgggctgatg atggtgatcc aactcttccc ttttatggat ctcatcggcg ccatcaacct
     8821 cgtccccttc atcctgaccg cccccgcccc ttatcagata atgaccgggc tgttgctgct
     8881 gtatatgctg gcgatgccgt ttgtgttgca gaaagccgcc gccaaaaccg acttccggca
     8941 cattgccgtc tgcgccgccg ttgtggcggc agccggctat ttcaccggcc atttgagtta
     9001 ctacgaccgg ggtcggatgg ccaatatctt cggcgcaaac aacttctact acgccaaaag
     9061 tcaggcgatg ctctacaccg tcagccagaa tgccgacttt attaccgccg gcctggtcga
     9121 tcccgtcttc ctccccttgg gcaatcaaca gcgtgccgcc acgcatctga acgagccgaa
     9181 atctcaaaaa atcctcttta tcgtcgccga atcttggggg ctgccggcca atcccgaact
     9241 tcaaaacgcc acttttgcca aactgctggc gcaaaaagac cgtttttcag tttgggaaag
     9301 cggcagtttt ccctttatcg gcgcgacggt cgaaggcgaa atgcgcgaac tgtgcgccta
     9361 cggcggtttg cgcgggttcg cactgcgccg cgcgcccgac gaaaaatttg cccgctgcct
     9421 ccccaaccgt ttgaaacaag aaggttacgc cacctttgcg atgcacggcg cgggcagttc
     9481 gctttacgac cgcttcagct ggtatccgag ggcgggcttt caagaaatca aaaccgccga
     9541 aaacctgatc ggtaaaaaaa cctgtgccat tttcggcggc gtgtgcgaca gcgagctgtt
     9601 cggcgaagtg tcggcatttt tcaaaaaaca cgacaaggga ctgttttact ggatgacgct
     9661 gaccagccac gccgactatc ccgaatccga cattttcaac cacaggctca aatgcaccga
     9721 atacggcctg cccgccgaaa ccgacctctg ccgcaatttc agcctgcaca cccaattctt
     9781 cgaccaactg gcggatttaa tccaacgccc cgaaatgaaa ggcacggaag tcatcatcgt
     9841 cggcgaccat ccgccgcccg tcggcaacct caatgaaacc ttccgctacc tcaaacaggg
     9901 gcacgtcgcc tggctgcact tcaaaatcaa ataacaacaa tgccgtctga acgcaccaac
     9961 agccttcaga cggcattttg cagacagacc gacccttcaa gcccactttt ttcatcatct
    10021 ccgataaatt gctttgtata gtggattaac aaaaaccagt acggcgttgc ctcgccttag
    10081 ctcaaagaga acgattctct aaggtactga agcaccaagt gaatcggttc cgtactattt
    10141 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccgccat aaagaccgtc
    10201 gggcatctgc agccgtcatt cccgcgcagg cgggaatcca gaacgtggaa tctaaagaaa
    10261 ccgttttacc cgataagttt ccgcaccgac agacctagat tcccgcctgc gcgggaatga
    10321 cggctcatac atcacccaaa aaattgaaac caaacagatg ggattccctc ttgcgtgagg
    10381 ctgacagatg ccgtctgaaa gactttcaga cggcatagct ttttctcttt gaatttatag
    10441 tggattaaca aaaatcagga caaggcggc
//
LOCUS       DAWGBY010000062         9912 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.062, whole genome shotgun sequence.
ACCESSION   DAWGBY010000062 DAWGBY010000000
VERSION     DAWGBY010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9912
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.062"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            41..196
                     /locus_tag="WHG62_001314"
     CDS             41..196
                     /locus_tag="WHG62_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725415.1"
                     /translation="MHKLCLATSRSDDFIRKTAASGTISNRPTEDGILSTRPAAHAAE
                     EPPYQAS"
     gene            205..1254
                     /locus_tag="WHG62_001315"
     CDS             205..1254
                     /locus_tag="WHG62_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ1725416.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKDETDKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRIGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(1323..2864)
                     /locus_tag="WHG62_001316"
     CDS             complement(1323..2864)
                     /locus_tag="WHG62_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ1725417.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(3475..4830)
                     /locus_tag="WHG62_001317"
     CDS             complement(3475..4830)
                     /locus_tag="WHG62_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ1725418.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIVGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPTRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            5027..5848
                     /gene="nadE"
                     /locus_tag="WHG62_001318"
     CDS             5027..5848
                     /gene="nadE"
                     /locus_tag="WHG62_001318"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ1725419.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGVHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGMYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(5918..6391)
                     /locus_tag="WHG62_001319"
     CDS             complement(5918..6391)
                     /locus_tag="WHG62_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ1725420.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPIGVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            6689..7021
                     /gene="trxA"
                     /locus_tag="WHG62_001320"
     CDS             6689..7021
                     /gene="trxA"
                     /locus_tag="WHG62_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ1725421.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(7074..8021)
                     /locus_tag="WHG62_001321"
     CDS             complement(7074..8021)
                     /locus_tag="WHG62_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ1725422.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            8349..9737
                     /locus_tag="WHG62_001322"
     CDS             8349..9737
                     /locus_tag="WHG62_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ1725423.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGWRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGKSERRYKDR"
BASE COUNT         2424 a         2740 c         2600 g         2148 t
ORIGIN      
        1 ttgaaagatt ctacccccgc acgcaaaccg atttcaaccg ttgcacaaac tttgcctcgc
       61 cacaagccgc agcgacgatt tcatccgcaa aaccgccgca tcaggtacaa tatcgaaccg
      121 tccgactgag gacggcattt tatcaacccg tcctgccgca cacgccgcag aagaaccgcc
      181 ttatcaggcg agttaggaaa aatgatgtcc aaacagccca ccagcaaacg ccaatggcgc
      241 gacggcgcag ccccgtctgc caagaaaacc gccaaaccgt tcaaaagcaa agcccgtccc
      301 aaagacgaaa cggacaaaac cgcatcccaa ccttacggac aaaaagcttc agacggcatc
      361 aaacctcaaa acctccccaa acagcgcgcc gccaaagcca aaaaactcgt cgtccgcaat
      421 cccaaccaaa aaattatgga acacgcgcgc gatttaaaag aacgccgcag cgacctatcg
      481 cgcatggaac ccgaacgcct gcaaaaagtg cttgccgcgt ccggcgtcgg ctcgcgccgc
      541 gaaatggaag aatggatcaa caacggctgg gtaacggtca acggcaaaac cgctcaactg
      601 ggcgacaaag tcacccccga cgaccacgtt accgtcaaag gcagcatcat caaactcaaa
      661 tgggccgacc gcctgccgcg catcatccta tattacaaac aagaaggcga aatcgtttcc
      721 cgcgacgacc cgcaaggccg cgtcagcata ttcgaccgcc tgccgcaggc cgccagcagc
      781 cgctgggtcg ccatcggacg cttggacatc aacaccagcg gacttctgat tctcaccacc
      841 tccggcgaac tcgtccaacg tttcgcccac cccagcttcg aagtcgaacg cgaatacgcc
      901 gtgcgcgtac tgggcgggct gaccggcgaa caaatgcgcg tcctcaccga agaaggcgtg
      961 atgctcgaag acggcttggc aaaagtcgaa cgcatccgcg aacaaggcgg cgaaggcgcg
     1021 aacaaatggt acaacgtcgt gattaaagaa ggccgcaacc gcgaagtgcg ccgcattttt
     1081 gaaagccaag gactcaccgt cagccgcctc gtgcgcatcg gcttcggtcc catcggactg
     1141 cccaaccgcc tcaaacgcgg gcagttctac gaactcaacc ccgccgaagt cgccaacatc
     1201 atcaaatggg cggacatgct gctgccgggc gaacgccgcc gcaaaaaagc ctaaacccgc
     1261 caaaacacaa aaatgccgtc tgaaacatct gctgtttcag acggcatttt attcgggcgt
     1321 tttcaggaga aaaggtcgag tgctttgaca aagaccatca ccacgccgta ggcgagcggt
     1381 atgacggcca atgcccaacg ccaccagacc gatatgccgc cgccggaaac tttttcgccc
     1441 acaaggtaag cgtcggatat ggcggtttcg tcgtcggggt tgccgctgtg tgcggcggtt
     1501 ttgatgtctt tttcgtggtg tttttcgtgt acggatttga cggcgaggtt gcacaacaaa
     1561 ccgataatca gcaggcacgc catgatgtac atggttacgc tgtatgcctg tgccgccggt
     1621 atgccgctgt cgatttggct ttggcgtatg taattgacca gtaccgggcc gatgacggcg
     1681 gcggttgacc aggccagcag gatgcgtccg tgaatcgcgc cgacctgata ggtgccgaac
     1741 aggtctttca ggtaggcggg aatggcggca aatccgccgc cgtacatgga aataatcacg
     1801 caaaagccga tgatgaacag ggctttgctg ccgccctcgc cgatggaggg aacggcgaaa
     1861 tacagcagcg agccgagtac gaagaagatg gtgtaggtgt ttttgcgtcc gattttgtcg
     1921 gaaacgctcg accacaaaaa gcgtccgccc atgttaaaca ggctcaggag gctgacgaag
     1981 cctgccgccg cacctgcgcc gactgctgcc tgcctgccta tggaggtttc ggaaaagagt
     2041 tcctgaatca tcacggatgc ctgacccaat acgccgatgc cggcggttac gttcaggcac
     2101 aatacccaga acaacagcca aaactgcggc gttttcatgg cttgggacac gttgacatga
     2161 ttactgctga ccagcttgtt ttgcgttttc ggcgcggtat agccttcagg tttccagccg
     2221 tcggcaggta cgcggatggt aaacgcgccg aacatcatca gtgcgaggta aagcaggccc
     2281 aatacggcaa aggtttcggc aaccccgacc gaagcggcgt ttgaaaaggc gttcatcagt
     2341 gatacggaaa gcggagaggc cagcattgcg ccgccgccga aacccataat cgccaaaccg
     2401 gtcgccatac ccggcttgtc gggaaaccat ttcatcagtg tggaaaccgg cccgatgtag
     2461 cctaagccta agcctacgcc gccgatgacg ccgttgccca aatagagcag gaagaggttg
     2521 tgcgtacgca cgccgaatgc ggatacgaag aagcccaggc tgaaacagca ggcggcggca
     2581 aatatggctt tgcgcggacc tacccgttcc atccatgtgc cgaacagggc agccgacgcg
     2641 cccagcatcg cgagtgcgat actaaaaatc caacctacgg tcgtcagctt ccaatctccg
     2701 gccgccgatt cggttatgcc gataagtttg gtcagcggcg cgttgaatac ggaataggcg
     2761 taaatctgcc cgatggcaag gtgcaccgcc aatgctgcgg gcggtacgag ccaacggttg
     2821 aaacccggct tggcaatgct tgcctcacgg tctaaaaact tcataacatc ctctttctgt
     2881 cagttgaaaa ataaaatttc atttgctcaa tggaaactta ttgaaaatta taaaaaaata
     2941 tcgggtcagg tttttatccg ccccaagatg cgccgtctga aacatttcgg gtgtacggaa
     3001 aggtttctgt tttttccgac aaattcctgc ggcttttcgc ttccggattc ccgcttttgc
     3061 gggaatgacg aattaaagat tatcttaagg tcaagggact ggattcccgc ttttgcggga
     3121 atgacggcgg cgggttgctg ttttttattt ataaatttct gtaactttgg atttcagcca
     3181 tcttcaataa attatcgaaa cgtatcaatc gtcattcccg cgcaggcggg aatccatcca
     3241 gttcgttcga tttcggtttt ttaagtttcg agtaacttct gactcgtcat tcccgcgtag
     3301 gcgggaatcc ggttttttga gtttcagtca tttctaatac attcccacca cttttcgctt
     3361 ccggactccc gctttttcag gaatgacgaa ttaaagatta tcttaaggtc aagggactgg
     3421 actcccgctt ttgcgggaat gacggcggag ggggagcggt ttttccgatt gggtttaaat
     3481 gcaatcgaac aaatcctgct gcccttgttc tttgcttacg cgcacgtcgg tttcgccgtc
     3541 ggcgaaggta atgtgcagct tctgcccctg cttcaaaaca tcggcgttgc ggatgacttg
     3601 tccgcgtgtg tttttgacga cggaaaagcc gcgctccaga atgtgctgcg gcgaaacggc
     3661 ttcgagcaat gcggcttggg cggtcaggct ttggcggcgg tgggtaagca gttggctgaa
     3721 ggcggcgggc aatgccgtct gaaggcggac gatgttgttt ttgcaaacgg aaacatcagg
     3781 acggtaatgt tgcagggctt gggtttggcg ttcaaaacgg gcggtgtggg cacggaggtt
     3841 ttgcttcata gagtaagaca gcgtttgcgc cagcttgccg attgaagcgc gctgctcatc
     3901 aagtttttgg cgcggatgac ggatttgccg cgcaagccag tcgagttttt ggctggcatc
     3961 gaaatagcgt tgttccaaaa cggttttcag acggccttgc gcctgagcga gacgatgtag
     4021 cgattcttgg cggttggggc tgaccagctc cgccgcaccg gtcggcgtgg gcgcgcgcac
     4081 gtcggcgaca aaatcggcaa gcgtaaaatc ggtttcgtgt cccacgccac tgacgacggg
     4141 aaccgtgcag gcttcgattg cgcgcacgac cggttcttcg ttaaacgccc acaagtcttc
     4201 aatgctgccg ccgccgcgac agacaatcaa cacgtcgcat tcggcgcgtt gcgaggcggt
     4261 tttaatcgct tgggcaattt gtaactcgct gcctgcgcct tgaacaggtg tcggataaac
     4321 gataacggga atttcgggcg cgcggcgttt caaggtggta acgacatcgc gcaatgccgc
     4381 tgctgccagg ctggtgacga tgccgataca ttgcggacgg gtaggcaacg gctttttgcg
     4441 ttccgccgca aacgcgcctt ccgcctgcaa ctgtgccttc aaccgctcgt aggcttcgta
     4501 aagctgcccc aaacctttga gccgcacctc attcacggta atttgaaatt cgccccgcgc
     4561 ctcgtaaata ctgatttttc ctgatacttc gatatggtcg ccttctttca aaggcttcgc
     4621 caaacgcgcc gccgcacctt tgaacatcgc gcaacgcacc tgcgcgcggc tgtctttgag
     4681 cgagaaataa taatgtccgc tggcggcacg ggtcaggttg gacacttcgc ccacaatcca
     4741 caggccggca aggtggtttt ccaaaagact tttggcaaat gcgttcaact cggaaacgga
     4801 caacacgtca gaatgaaaaa aatcagacat agaatcaatc aaataataaa aaatatgaat
     4861 atgttttgaa gcctaaggcg gtattagtcc gcctaaattg tcaacaatat tataacacgc
     4921 gccatcttgc cgcccgcctt ttcccgtatg acttttttaa gcggggaatg ggaaaaatat
     4981 tcatcaaccc gccctcaatc tattcaaatt acaccgccga caagctatga tgcggatatt
     5041 ttcgacagga ggaaaaatgg atacgcaggc agttatcaca catattgtcc gatggttgga
     5101 cgaatacgcc gcccgggcaa atgcaaaagg gtttgtcgtg ggcgtttccg gcggcatcga
     5161 ttccgccgtc gtctccgcac tcgccgcccg caccggccgc accacgctgc ttctggatat
     5221 gccgatacgc caacaccccg accagcttga gcgggcaagg ctgcacatcc gcaatctgca
     5281 acggcaatat gccaatgtaa gcgcacaaac ggtcgatctg accgacacct tccagacctt
     5341 tgaacaaacc gtcggcgttc atcagacggc atttgacaat cagccgcttt ccctcgccaa
     5401 cgccagaagc cgcctgcgta tgctgaccct gtactactac gggcagatac acggactact
     5461 ggttacgggg acaggtaaca aaattgaaga tttcggtgta ggatttttta ccaaatacgg
     5521 cgacggcggc gtggacatca gcccgattgc cgacctgacc aaaacccagg tttaccggct
     5581 tgccgaagca ttgggcgtgg acgaggcgat tcaaaaagcc ccgccgaccg acggcctgtg
     5641 ggatacggaa cgcaccgacg aggaacagat gggcgcgagc tatcccgaac tggagtgggc
     5701 aatgggcatg tacggcacgc gcaaacccga agattttgaa gggcggcagc gcgaagttct
     5761 ggaaatctat acgcggctgc accgcgcgat gcagcacaaa atcaacccga ttcccgtgtg
     5821 ccgcattccg cccgaattgt tgggctgaaa cgtggaaatg ccgtctgaaa cggaaaaccg
     5881 tatttcagac ggcatggaaa tatccgactc ctatccctta agaatcgagt acgcgggcaa
     5941 acaaaatatc gttttccaaa tgaatgtggt cgttcaaatc ctccaccatt tctttcgcca
     6001 gcgcgtaaag ccgcgtccag cttccgcaag ccccttctgg cggttggaaa ttgtcggtca
     6061 gctctttgag ccgtgcgatg gcgcggtcgt gttcttcatg ttcgtgcatc atcacgccga
     6121 tgggcatcgc cgcaccgcgt ccgacaccct gattaatcat cggaaacagc atccgctcct
     6181 ccttcatcat atgcatcagc agttcgttct gcatataggc aagcagcccg gcaatttctg
     6241 ccggaaaggt atcggcatgg acttgggcca ctttctgcgc cagcggcacc aattcttcaa
     6301 attgtgcgcg gtggacattg tggtagcgtt gcaggatatg atcgacggtt gcaccaaagg
     6361 gggcggtctc ccaaacggaa aaatcagtca tcgcagtgtt ccttttacag ggtttcgggt
     6421 ttggttttga acattcatac tttaagaatc aattcaaacg gagcatacac cgcccgcgcg
     6481 cttctgtaca gcctcaaacg tattccttac attttgataa taaaagtaat tttcagaaat
     6541 aaaatactgt ccgaaccgtt ttttagaatt tgcaaaggcg attggggcgg tacagaaaaa
     6601 ctattatccc gcccgcccac ttgaaatttt tatgcccaag ccctatcctg cacgctatcg
     6661 tgccaatccc aaccgaaaag gaaaaataat gagcagcgaa ttgattgtac acaccagcga
     6721 tgccgctttt gaaaaagacg ttttaaatgc agatatcccc gtcctgctgg acttttgggc
     6781 tccgtggtgc ggcccctgca aaatgattgc cccgattttg gacgacattg ccgccgaatt
     6841 tgaaggccgt ctgaaagtgg tcaaaatcaa catcgacgac aacgaagcca ccccgtcccg
     6901 tttcggcgtg cgcggcattc cgaccctgat ggtgttcaaa aacggcgaag tcgtcgccac
     6961 caaagtcggc gcattggcaa aaggtcagct gaccgccttt gtcgaagcct ctatcgcctg
     7021 ataaagcgca atcgaaaaag ccgccggaag attccggcgg ctttttcgca cccttaagat
     7081 ttgtggcgga tttcccagca cctatggatt tttttgttgc ggaaatcttc gggaacggat
     7141 tgtttggaaa tgtctttgac ggcgtattgt tccgatacca agtcgtctaa gacgaagctg
     7201 cgcaggttgt tggaaaagta caaaatgccg tctgaagcga gcagcttcac cgcgccgtca
     7261 atcagctttt tgtggtcgcg ctggatgtcg aggatgtcgg acattttctt gctgttggaa
     7321 aaactgggcg ggtccatcac aatgaggtcg aaccgcctgc cttccccata tgccgtctga
     7381 agatattgga acacgtcggc gcggacgatt ttatgccgtt ccgtatcgat gccgttcaat
     7441 tcaaaattgc gtctcgccca atcgagataa gtgttagaca aatcgacagt ttcgctggat
     7501 gccgcgccgc cggtggcggc atagacagtg aagctgccgg tgtaggaaaa caggtttaaa
     7561 aaacgtttgc ccgccgccgt ttcgccgact tttttgcgcg tgtttcgatg atccaaaaaa
     7621 agccccgtat ccaaatactt atcaaggttg acccaaaact tgcggccgtt ttcggtgatg
     7681 acgaaatcgt cgcccgcctt gccggttttt tcgtattgct gcaaaccttt ttggcgttcg
     7741 cggcgtttga ggcggatttg ttcgggcgca aaaccggtaa cgaaggcgac ggcttccaag
     7801 acttcggcaa gccacgcttc gtattcttcg ggccgcatca gccagccggt atcgtattcc
     7861 tgaaggtgga ttcgatcgcc gtaaacatcg gcggcaaagg ggaattgggg gatgtcgcgg
     7921 tcgtaaatgc gccaggcttc gatgccgttg cgtttcgccc atttcataag gtgtttgatg
     7981 tttttgccca agcggttggc aaacggtgtg atgtcggtca ttggtttcag gcggaataaa
     8041 gtggaaaacg gcaattttac tgtaattaac gcccgattgc ttgaccgttt cgggcaaacc
     8101 ctataccatc caccgcttat cttgtcatac gaagccatcg ccttccaacc taaaccgccc
     8161 ttacgggcgc gtttcttctg ttgctttgat tttgcaaagc gtatctgtgc aggttgccgt
     8221 cgatgtaaac cacaagcaag ccgcttgcga caaccctgta acttcacatt ccccgtatcg
     8281 ttacccttcc ctgcttcagg ccgtctgaac ctttcggacg cgggcgttgt tgtcttccaa
     8341 ggatagccat gtctattaaa tttgccgatt tgaaccttga taaaaacatt ttgtccgccg
     8401 tcagcagcga gggttacgaa agcccgacgc cgattcaggc gcaggcgatt ccgtttgctt
     8461 tggaaggccg cgacatcatg gcttcggcgc aaaccggctc cggcaaaacc gccgcctttc
     8521 tgttaccgac tttgcagcga ctgaccaaac gcagcgaaaa accgggcaaa ggcccacgtg
     8581 ctttggtgtt gaccccgacc cgcgaattgg cggctcaagt cgagaaaaac gcgctggcgt
     8641 atgccaaaaa tatgcgttgg ttccgtaccg tcagcatcgt cggcggcgca tcgttcggct
     8701 accaaacccg cgccctgagc aaaccggtcg atctgattgt cgccacgccg ggccgcctga
     8761 tggacttgat gcaaagcggc aaagtcgatt ttgaacgttt ggaagtgctg attctggacg
     8821 aagccgaccg tatgttggat atgggcttta tcgacgacat cgaaaccatc gtggaagcaa
     8881 cgccgagcga ccgtcagact ttattgttct ccgccacttg ggacggcgcg gtcggcaaac
     8941 tggcacgcaa actgaccaaa gaccctgaaa tcatcgaagt cgaacgcgtg gacgaccaag
     9001 gcaaaatcga agaacaactg ctgtactgcg acgatatgcg ccacaaaaac cgcctgctcg
     9061 accacatcct gcgtgatgcc aacatcgacc aatgcgtgat tttcacgtcc accaaagcca
     9121 tgaccgaagt catcgcggat gaattgtacg aaaaaggttt cgccgccaac tgcctgcacg
     9181 gcgatatgcc gcaaggctgg cgtaaccgca cgctgatgga cttgcgcaaa ggccgctgca
     9241 aaattttggt tgccaccgat gtagccgcac gcggtatcga cgtaccgacc attacccacg
     9301 ttatcaacta cgacctgccg aaacaggcgg aagactacgt ccaccgcatc gggcgcaccg
     9361 gccgcgcagg ccgcacgggt attgcgatta cgtttgccga agtgaacgaa tacgtcaaag
     9421 tccacaaaat cgaaaaatac attaaccgaa aactgcccga actgaccatc gagggcatgg
     9481 aaccgacccg caaacgcaaa tccgcaggcg gcaagccgaa aggcaaaggc ggctggggcg
     9541 atcgtaaatc cggcggttgg cgcggcgatc ataaaccggg caaagaaggc ttcggcggca
     9601 aaacgcgcgg cgaaggtttc aagaaagaag gctttaagaa agacggtttc aaaaaaaccg
     9661 gcgaaggctt caaaggcaaa cgtaaagccg gcgattcttt tgcaggcaaa agcgaacgcc
     9721 gttacaaaga ccgctaagcc ccaacctgcc tcataaacca atgccgtctg aaaccgattt
     9781 cgagtttcag acggcatttt tgcaatgttt caacaccgcc cggctttgat acccaaagga
     9841 ttaatctgca atatagtgga ttaacaaaaa ccagtaccgc gttgcctcgc cttagctcaa
     9901 agagaacgat tc
//
LOCUS       DAWGBY010000063         9852 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.063, whole genome shotgun sequence.
ACCESSION   DAWGBY010000063 DAWGBY010000000
VERSION     DAWGBY010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9852
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.063"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..486
                     /locus_tag="WHG62_001323"
     CDS             <1..486
                     /locus_tag="WHG62_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ1725424.1"
                     /translation="WNNNKYSVNIKKGRETRDNREELKTENQENGSFHAASSLGLSAI
                     YDFKLNDKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPKGKNLKGGPVSLQHSSQP
                     AYHESNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYH
                     F"
     gene            complement(460..669)
                     /locus_tag="WHG62_001324"
     CDS             complement(460..669)
                     /locus_tag="WHG62_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725425.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKYA
                     GKGLMPSEGSDGIGIGESEVVAHAQ"
     gene            complement(687..1244)
                     /locus_tag="WHG62_001325"
     CDS             complement(687..1244)
                     /locus_tag="WHG62_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ1725426.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(1320..2954)
                     /locus_tag="WHG62_001326"
     CDS             complement(1320..2954)
                     /locus_tag="WHG62_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ1725427.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPVGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(3028..3360)
                     /locus_tag="WHG62_001327"
     CDS             complement(3028..3360)
                     /locus_tag="WHG62_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725428.1"
                     /translation="MSRCCLKRLQTASAVSAFSGGVLGCGVKLCCRRLSVLFNPGVML
                     FVPDCPVGGAAGFFQYEMLCPFFWQGRLQTGSNLAYDVFMSAGRLNGGRNPPHSRRFL
                     ALLCSVAL"
     gene            complement(3360..4466)
                     /gene="serC"
                     /locus_tag="WHG62_001328"
     CDS             complement(3360..4466)
                     /gene="serC"
                     /locus_tag="WHG62_001328"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ1725429.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHINRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4831..5262
                     /gene="rimP"
                     /locus_tag="WHG62_001329"
     CDS             4831..5262
                     /gene="rimP"
                     /locus_tag="WHG62_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ1725430.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            5290..6792
                     /gene="nusA"
                     /locus_tag="WHG62_001330"
     CDS             5290..6792
                     /gene="nusA"
                     /locus_tag="WHG62_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ1725431.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDYLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6804..9692
                     /gene="infB"
                     /locus_tag="WHG62_001331"
     CDS             6804..9692
                     /gene="infB"
                     /locus_tag="WHG62_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ1725432.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARSL"
BASE COUNT         2645 a         2837 c         2491 g         1879 t
ORIGIN      
        1 tggaacaaca ataaatattc cgtcaacata aaaaagggga gagaaacccg ggacaatagg
       61 gaagaactga agacggaaaa tcaggaaaac ggcagcttcc acgccgcttc ttctctcggc
      121 ttatccgcca tttacgattt caaactcaac gataaattca aaccctatat cggcgcgcgc
      181 gtcgcctacg gacacgttaa acatcaagtt cattcggtgg aaacaaaaac cacgactgtt
      241 acctctaaac caaaaggaaa aaatctaaag ggaggacctg tctcattaca gcattccagc
      301 caacctgcct atcacgaaag caacagtatc agcagcttgg gtcttggtgt catcgccggt
      361 gtcggtttcg acatcacgcc caagctgacc ttggacaccg gataccgcta ccacaactgg
      421 ggacgcttgg aaaacacccg cttcaaaacc cacgaagtct cattgggcgt gcgctaccac
      481 ttctgattcc ccgataccga tgccgtctga accttcagac ggcatgagac ctttgcctgc
      541 gtacttggta cgctggtcgc ctccgaacat ggcgcgacac ccgacatttc cgccgaacgc
      601 atcgggcgtt tcatgaatcc ggtttaaaac gcatggaaaa atgccgtctg aaagcctttc
      661 agacggcatt tcgcttgaga ttccgtttac caatggctga caaacgcttc caaatcggta
      721 ttcttgggct tatgcacttc ctctgtcggc gtgccgacca tcatcagccc gatgatttta
      781 tccttatccg cacatccgaa agcctcacgc aacagggggc tgttgaccca catccccgta
      841 atccagacat tgtcgaaacc ttgcgccgtt gccgccagtt gcagcgcata cgccgcacaa
      901 cccgccgtca gcatctgctc ccattccggt ttcggcttag gcacatcgcg gttcggcgca
      961 aacgttaccc cgataaccat cggcgccata ttgcccactt tttcagcctt tttcatcgca
     1021 tcgtcgccga aattcaattc ggcaaccgtt tgcttcaaca catcgcgaaa acgttgcaat
     1081 cctacctcgc cttgaatcac ggtaaaacgg aaggggcgca tattgccgtg atcgggaact
     1141 tgggttgccg cctgaaatat ttgttccaac tccgccgcat cgggggcggg gtgcttcagc
     1201 tttttggaag atcggcggtt cgtcaataat tttaaagcat ccatatcgtt atactccggt
     1261 catcggtcgg gtgttcggac acatatgccg tccgaaggct tcagacggca tatccggcat
     1321 cagcgcggac ggcggcaggc tgccaatata tccatttcct tccgataggt ttggctattg
     1381 gaaatgtcca tcagccccaa taccgtgctg aaatagtggt cgtgcgaata ttcgttttcc
     1441 gccgcttttt gtttgaggca ttggaaatct atgcccccgt gttggcggaa ggctttggaa
     1501 aaccacataa ccatcgggat atgcgtctgc ccggaaggcg cgatggcgta aggcgcggcg
     1561 tgcaggtaca tcccgttttc gcccaaactt tcgccgtggt cggaaacata atgcaccacg
     1621 ctttccaaat cgtcgcggtt ttcaagtttg cggataacct tgtcgataaa ctggtccaca
     1681 tacaaaaccg tattgtcgta agtgttgacc agcgtggcgc gggtgcattt gttgatttcg
     1741 ttggtgtcgc aggtcggcgt gaatttgcgt tcggcttcgg tatagcgttc gtaatacgtc
     1801 ggcccgtggc tgccgatggt atgcaggatt aaaaccgcgt ctttatcgtt tttgttgagg
     1861 acttcgtcga acttagtcag caggatattg tcgagacact cgccgttgcg gcagtattcg
     1921 ggcaggttga gcgaggtaac gtcggtattc ggcactttgc cgcacacgcc cttgcagccg
     1981 gaatcgtttt ccaaccaagt aacttccacg ccggcgcgct gcacgatgtc cagcaggttg
     2041 tcttggtgtt cggctttgat ttcgtcataa tccgtgcggt cgaaggttga gaacatacac
     2101 ggcagggagt gcgcggtcga tgtgccgcag cttctgacct gcgggaaatt gacaatttca
     2161 tcgccgcgcg cggcaagcag cggcgtagtt tggcggctgt aaccgttcaa accccagttg
     2221 gcggcacgcg tggtctcgcc cacgaccagc accacgaaac ggcgcaggct gccgaccggc
     2281 cggttttgca cgaccgccat atccaattgc gtataaggaa tattggaacg cttccaatct
     2341 ttgtatttcg acacgcccgc gccgatgaaa ttagacggca caatcagatg ggttactgat
     2401 ttattgttgc ggaaaaacga ggcgtaatcc tgatattgca acattgcgat gcccaacgcg
     2461 cacaaaaagg aaacggcggc aagcacaagg cgtgtcaaaa gctccttata ccaaacgcgg
     2521 tatttaacct tgacggcgat atacgccagc gcgggcaata cgcccaaaca tacaatccac
     2581 agcacatagc ccggcgtaat caggcgcgcg ctttcggcag ccgtagtttg caagacatta
     2641 ttcaacatcg acttgttgaa atagatattg aaaaatattt cttggtaaga caccgccgca
     2701 ctgataacca atatcaacgg aatcaatacc ttatgcacga aaggcagggc aatgacgtga
     2761 aaaacgaaat tacttaaaaa aaacagcacc accggcatcg tatagaggaa gatatccgcc
     2821 ccggtgccgt taaaaggatg aagctcgaca actttggcaa aaaaggcgta attcaatacc
     2881 agcgaggaat acagggaaag gaaggcaatc agcgcggaag agccgagctt cggcctcagg
     2941 ttcggtttta tcatttggaa tgtgtcggat aagggttgga aaaggcatcc ggcatttgga
     3001 atccggatta ttgaaaaaga ttcttaatta taaggcaacg gagcaaagca gggcaagaaa
     3061 acggcggctg tgcggggggt tccgcccgcc attcaaacgt ccggcagaca taaaaacatc
     3121 gtaagcaaga ttcgaaccgg tctgcaaccg cccctgccag aaaaacgggc aaagcatttc
     3181 atattggaaa aacccggccg cgccgccgac gggacagtcc ggcacaaaca gcatcacgcc
     3241 cggattgaaa aggacggata gccgccggca gcacagtttt accccgcatc ccaaaacgcc
     3301 gccggagaac gccgaaacag ccgatgccgt ctgaagccgc ttcagacaac atcgggacat
     3361 caaccgtaac gccgttggaa atcgcgcata aaatctgcca aagcccgcac gccttcgagc
     3421 ggcatcgcat tgtagatgct ggcgcgcatc ccgccgacag acttatagcc cttcaacagg
     3481 cacaagccct gcaattcggc ttccagcaca aaacggcggt caagctcctc atcccccgtt
     3541 tggaacacga cattcatttt agaacgcgca ttcggacgga tacggttgat ataaaaaccg
     3601 ccactgccgt ctatcgtctc atacaaggtt tgcgccttca gccgattgac cgcttcaatt
     3661 tttttcacac cgccctgcgc ctgcagccag cggaacacca gccccgacat ataaatcgcg
     3721 taagttgacg gcgtgttgta cataccgtcg cggttgatgt gcgaacggta gttgaacaca
     3781 tcgggaatat cgttcggaca acgctcgagc aaatcctcac gcacaatcac caccgtaacc
     3841 cctgccggcc cgatgttttt ctgtgcgcct gcgtaaatca gtccgtagtc ggcaacatca
     3901 aactcgcgcg acaaaatctc gctggacata tcgcacacca gcggcggcat gccttctgaa
     3961 aggcgcggca cttcacggta ttgcagcccg ttgaccgttt cattgacggc aaaatggaca
     4021 aacgccgaat cgggtgcaac atcccacgtt tccacaggcg gcaggtcgag atagtcgaac
     4081 tgctcgccgc catgcgccgc caaacggatt tccgtatcgg tcaaacggct catctgttca
     4141 taagcgatac ggctccagtt gcccgttacc accgcgtcgg cagtgcggaa accgtgtgcc
     4201 agattcatgg ctgccatatt aaattgggtt gttgctccgc cctgcagaaa caatatctta
     4261 tagttgtcag gcactttcaa aagctgcctc aaatcctgtt ccgcatgatg caggatgctc
     4321 aaaaacattt ccgaacggtg gctcatcgcc atcacgggaa aacccgtacc gttgtagtcc
     4381 aacatttcct gccgcgccgt ttccaacacg gcttcgggca atacggcagg gccggcggaa
     4441 aaattgtaaa tcggataaag agacatgatg cagccttgat tctgaacaat aacccgcccg
     4501 attttaggct ggcagcaggc tttgtgcaag gatggaaaat acctgtcctc cgcccgattc
     4561 catgccgccc gaacacggaa aacaacatca atatattgat ttacaaacat aaaaatcatg
     4621 ctagcgacaa atagatacat ttgttttgtc aacaatattc acgatttccc attacaaacc
     4681 tcccttacac ccgctttttt ccgtcccaaa aacacaaaat aaatcaacac tttcatttct
     4741 ccgcaaaagc ggttataatt acgccgattt ttcaactttg acgaaaaatg gccacggggc
     4801 cattttttta ttatgtacat agggagcagc atggatattc aaaccatcct cgaaaaaacc
     4861 ctgcccggcc tgggctacga actggtcgat ttcgaactga ccgcgcaagg aacattgcgc
     4921 gtgttcatcg acaaagaagg cggcattacc gtcgaagact gcgcaaccgt cagcaaccat
     4981 ttgagccgcg tcttcatggt ggaagacatc gactacaaaa acctggaaat ttccagcccc
     5041 ggactcgacc gccccttgaa aaaagccgcc gacttcgtgc gctttgccgg tcagaatgcc
     5101 aaaatcaaaa cccgcctgcc gatagacggt cagaaaaact ttatcggtaa aatcgaaggc
     5161 tgcgaaaacg ataccgttac cgtatccttc gacggcaaaa ccgtacaaat cgaattgggc
     5221 aacatcgaca aagcccgcct gcgccccgaa ttcaaattct aaaacacaac aatattggag
     5281 atgttcaaaa tgagtcgtga aatgttacag ctggcagaag cactggcaag cgaaaaaaac
     5341 gttgatgcgg aagtcgtctt ccaagcactg gaattcgccc tgtctaccgc cgccaagaaa
     5401 aaggcagacc gcgaacacat ggacgtgcgc gtccaaatca accgcgacac cggcgaatac
     5461 caaaccttcc gccgctggct gattgtcgcc gatgaagact atacctatcc cgatgtcgaa
     5521 aaaaccatcg aggaaatcca agaggaaatt cccggcacta ccatccaaat cggcgaatac
     5581 tacgaagagc agctgcccaa cgaaggcttc ggccgccaag ccgcgcaaac cgccaaacaa
     5641 atcatcctgc aacgcatccg cgatgccgag cgcgagcaga atctgaacga gtttctcgcc
     5701 gtcaaagaag acatcgtgtc cggcacggtc aaacgcgtcg aacgccacgg catcatcgtc
     5761 gaagtcgttg ccggcaaact ggacgcgctg attccgcgcg accaaatgat tccgcgcgaa
     5821 aacttccgca gcggcgaccg catccgcgcc ctcttcctgc gcgtcgaaga aatcggcaac
     5881 accggccgca aacaagtcat cctgagccgt acttccggcg atttcctcgt caaactgtac
     5941 gccaatgaag tacctgaaat tgcagacggc atgcttgaaa tccgtgctgt cgcccgcgac
     6001 ccgggccagc gtgccaaagt cgccgtcaaa gccaacgacc agcgcatcga tccgcaaggc
     6061 acctgtatcg gcgttcgcgg ttcgcgtgtc aatgccgtca gcaatgaatt gtccggcgag
     6121 cgcatcgacg ttgtcctttg gtcgcccgag cctgcccaat tcgtcatgag cgcgctctca
     6181 cccgccgaag tcagccgcat cgtcatcgac gaagacaaac acgccgtcga tgtcatcgtt
     6241 gccgaagacc agctcgcgct cgccatcgga cgcggcggtc aaaacgtgcg ccttgcttcc
     6301 gacctgaccg gctggcagct caacatcatg acctctgcag aagcagacga gcgcaatgcg
     6361 gcagaagatg ccgccatccg ccgcctgttt atggattact tgaacgtgga cgaagaaacc
     6421 gccgacgtac tggttcagga aggttttgca accttggaag aagtcgccta tgttcctgcc
     6481 gccgaactgc ttgccattga aggatttgac gaagaaatcg tcgatatgct ccgcaaccgc
     6541 gcccgcgatg ccatcctgac catggcgatt gccgccgaag aaaaactggg cgaagtgtcc
     6601 gacgatatgc gcaacctcga aggcatagat gccgatatgc tccgcagcct tgccgaagca
     6661 ggcattacca cccgcgacga cttggcagag cttgctgtgg acgaactgat tgaaatcacc
     6721 ggtgtaaacg aagaaaccgc aaaagccgtc atcctgaccg cacgcgaaca ctggtttacc
     6781 gaagacaaat aaagggggta cagatgagta acacaaccgt agaacaattt gccgccgagc
     6841 tgaaacgccc cgtcgaagac ctgttgaaac agttgaaaga agccggcgtc agcaaaaaca
     6901 gcggcagcga ttccctgacg ctggacgaca aacagcttct gaacgcctac ctgaccaaga
     6961 aaaacggcag caacggcggc accatcagca tccgccgcac caaaaccgaa gtcagcaccg
     7021 ttgacggcgt aaaagtcgaa acacgcaaac gcggacgcac tgtcaacatt ccttctgccg
     7081 aagaattggc agcacaggta aaagccgccc aaacccaagc cgcacctgtc cggccggagc
     7141 agacggcaga agacgcggca aaagcccgag ccgaagctgc cgcacgtgca gaagcccgtg
     7201 ccaaggcaga agcggaagcg gcaaaactga aagcggcaaa agcaggcaac aaagccaaac
     7261 ctgccgcgca gaaacccacc gaagcaaaag ccgaaaccgc acctgttgcg gcggaaacca
     7321 aacccgccga agaaagcaaa gcggaaaaag cccaagccga caaaatgccg tctaaaaaac
     7381 ccgccgagcc caaagaaaaa gccgccaagc cgaaacacga gcgaaacggc aaaggcaaag
     7441 atgccaaaaa accggcgaaa cctgccgcac ctgccgtgcc gcaacccgtg gtcagcgcag
     7501 aagaacaggc gcaacgcgat gaagaagcac gccgtgccgc cgcacttcgc gcccaccagg
     7561 aagccctgtt gaaagagaaa caggaacgcc aggcacgccg cgaagccatg aaacaacagg
     7621 cagaacaaca ggcaaaaacc gcacaggaag ccaaaaccgg cagacagcgt cccgccaaac
     7681 ctgccgagaa accgcaggca gccgcgccgg ccgtcgaaaa caagcctgtc aatccggcaa
     7741 aagcgaaaaa agaagaccgc cgcaaccgcg atgacgaagg tcaaggccgc aacgccaaag
     7801 gcaaaggcgg aaaaggcggg cgcgaccgca acaatgcacg caacggcgac gacgagcgcg
     7861 tacgcggcag caaaaaaggc aaaaaactca aactcgagcc gaatcaacac gccttccaag
     7921 caccgaccga acccgtcgtt catgaagttt tggttcccga aaccattacc gttgccgatt
     7981 tggcgcacaa aatggcggtc aaaggcgtgg aagtggtcaa agccctgatg aagatgggca
     8041 tgatggttac catcaaccaa tccatcgacc aagacaccgc cctgattgtg gtggaagaac
     8101 tcggccacat cggcaaacct gccgcagccg acgaccctga agcattcttg gacgagggcg
     8161 cggaagcagt ggaagccgaa gcattgccgc gtccgcccgt cgttaccgtg atgggccacg
     8221 tcgaccacgg caaaacctcg ctgctggact acatccgccg taccaaagtg gtacagggcg
     8281 aagcgggcgg cattacgcag cacatcggcg cgtaccacgt tgaaacccct cgcggcgtga
     8341 ttaccttctt ggacaccccg ggccacgaag cctttaccgc tatgcgcgca cgcggtgcga
     8401 aagcaaccga catcgtgatt cttgtggtcg ccgccgacga cggcgtgatg ccgcaaacca
     8461 tcgaagcgat tgcccacgcc aaagcggcag gcgtaccgat ggtggttgcc gtcaacaaaa
     8521 tcgataaaga agccgccaac ccagagcgta tccgccaaga gctgaccgca cacgaagtcg
     8581 tgcctgacga atggggcggc gatgtacagt ttatcgacgt ttccgctaaa aaaggcctga
     8641 acatcgatgc attgctcgag gcagtcttgc tcgaagccga agttttggaa ctgaccgcac
     8701 ctgtcgatgc gcccgccaaa ggcatcatcg tcgaggcgcg cttggacaaa ggccgcggcg
     8761 cggttgccac attgctggtt caaagcggca cgctgaaaaa aggcgatatg ctgctggccg
     8821 gtacggcatt cggcaaaatc cgcgcgatgg tcgatgaaaa cggcaaatcc attaccgaag
     8881 ccggtccgtc catccccgtc gaaatcctcg gcttgtccga cgtaccgaat gcgggtgaag
     8941 acgcgatggt attggcggac gagaaaaaag cgcgcgaaat cgccctcttc cgccaaggca
     9001 aataccgcga cgtgcgcctt gccaaacagc aggcggcgaa gctggaaaat atgttcaaca
     9061 atatgggcga aacccaggcc caatctttgt cggtcatcat caaggcagac gtgcagggct
     9121 cttacgaggc tttggcgggc agcctgaaaa aactgtccac agacgaagtg aaagtgaacg
     9181 tgttgcacag cggcgtgggc ggcattaccg aatcggatgt caaccttgcc atcgcttcgg
     9241 gcgcattcat tatcggcttt aacgtgcgtg cagatgcctc ttcgcgcaaa cttgccgaaa
     9301 atgaaaacgt ggaaatccgc tactacaaca tcatctacga tgccatcgac gacgtgaagg
     9361 cggcgatgag cggtatgctt tccccggaag agaaagaaca ggttaccggt acggtcgaaa
     9421 tccgtcaggt catctccgtt tccaaagtcg gcaacattgc aggctgtatg gttaccgacg
     9481 gcgtggtcaa acgcgattcc catgtccgcc tcatccgcaa caacgtggtt atccacacgg
     9541 gcgaactggc ttcgttgaaa cgctataaag acgatgtaaa agaagtccgc atgggcttcg
     9601 agtgcggtct gatgctcaaa ggctacaacg aaatcatgga aggcgaccaa ctggaatgct
     9661 tcgacatcgt cgaagttgcc cgcagcctgt aattcctttg caaataaaat gccgtctgaa
     9721 gcgttcagac ggcaacgaaa cgggttctgt atcatacaga acccgttttt tgtcgcaaat
     9781 cggcttcaga cagccctctt gccttatccc gatttgaatc tgacttgcca tacaaacagg
     9841 cttcagacgg ca
//
LOCUS       DAWGBY010000064         9769 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.064, whole genome shotgun sequence.
ACCESSION   DAWGBY010000064 DAWGBY010000000
VERSION     DAWGBY010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9769
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.064"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(314..547)
                     /locus_tag="WHG62_001332"
     CDS             complement(314..547)
                     /locus_tag="WHG62_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ1725433.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(713..913)
                     /locus_tag="WHG62_001333"
     CDS             complement(713..913)
                     /locus_tag="WHG62_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ1725434.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1085..1960)
                     /gene="xerD"
                     /locus_tag="WHG62_001334"
     CDS             complement(1085..1960)
                     /gene="xerD"
                     /locus_tag="WHG62_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ1725435.1"
                     /translation="MEEGLIDRLLETLWLDRRLNQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFSSVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYAGRAGIGHISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2012..2452)
                     /locus_tag="WHG62_001335"
     CDS             complement(2012..2452)
                     /locus_tag="WHG62_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ1725436.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            2773..3711
                     /locus_tag="WHG62_001336"
     CDS             2773..3711
                     /locus_tag="WHG62_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ1725437.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3840..4133
                     /gene="hfq"
                     /locus_tag="WHG62_001337"
     CDS             3840..4133
                     /gene="hfq"
                     /locus_tag="WHG62_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ1725438.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            4218..4784
                     /locus_tag="WHG62_001338"
     CDS             4218..4784
                     /locus_tag="WHG62_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ1725439.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAVGQWAKNLPQE
                     QFAVLRYGFTNRKNSPPYLLAFEKLRQK"
     gene            4838..5212
                     /locus_tag="WHG62_001339"
     CDS             4838..5212
                     /locus_tag="WHG62_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ1725440.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRVFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            5222..5716
                     /gene="folK"
                     /locus_tag="WHG62_001340"
     CDS             5222..5716
                     /gene="folK"
                     /locus_tag="WHG62_001340"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ1725441.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLHQTSSLY
                     ATAPVGYDDQPDFVNAVCTVSTDMDSISLLSLLNRIEADFGRKRSFRNAPRTLDLDII
                     DFDGISSDDPRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKQLGNQGIRL
                     LPDR"
     gene            complement(5842..6321)
                     /locus_tag="WHG62_001341"
     CDS             complement(5842..6321)
                     /locus_tag="WHG62_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ1725442.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRGLRLSWVGSARELDRKDSAYKRALSALSRKM
                     GRCKDKLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(6541..7278)
                     /gene="ubiE"
                     /locus_tag="WHG62_001342"
     CDS             complement(6541..7278)
                     /gene="ubiE"
                     /locus_tag="WHG62_001342"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ1725443.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINMAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7321..7689)
                     /locus_tag="WHG62_001343"
     CDS             complement(7321..7689)
                     /locus_tag="WHG62_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ1725444.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7809..9428
                     /gene="mnmC"
                     /locus_tag="WHG62_001344"
     CDS             7809..9428
                     /gene="mnmC"
                     /locus_tag="WHG62_001344"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ1725445.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRIEQQRNHELGLQKHHNHLYRSITSAEAEKIAGIPLSVPYDHPSCGLYWQHGVW
                     LNPPAFVRALLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSSC
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAQLSPALAESLFAANPIPQKHQGHAAMRCDSPDHLPLVGAL
                     GDIAAMQQTYAKLALDKNYRIDAPCPYLPNAYANTAHGTRGLATAPICAAAVAAEILG
                     LPHPLSKRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(9425..9574)
                     /locus_tag="WHG62_001345"
     CDS             complement(9425..9574)
                     /locus_tag="WHG62_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725446.1"
                     /translation="MDSKGNLLGIPYSLFWEENVMGVFDILPSGLVCLFEYDFLWSGR
                     HAAKA"
BASE COUNT         2607 a         2984 c         1963 g         2215 t
ORIGIN      
        1 tctaccgatt acacaaccac atatcatctt tacacaatca tgcttccatc aacagcaaaa
       61 catgatatga ttgctgctaa taacatctca caataaattt tctaattttt attgaaaaaa
      121 tcaataaata agaattctcc caaccgacaa ataaaataaa gaaagggtca atatgcaaca
      181 tcgaagaaga ctagcaattt accaagcatc caaacgtgct tcctttaccg gcaggtcatc
      241 agccccgcaa aaacgtaaag aacgttaatt tgaaaaaaat gccgtctgaa gtcctgcttc
      301 agacggcatt tttttaccgt tcgagaaact gtttcaacct gtcctcatcc aaaaaccagt
      361 ggcagatttc ctcatctccc gccaacaaaa cgggaaccag ctcattgtat ttttcttcca
      421 aaacaggatt ttcatccaca tcgaccactt ccagcccgaa cccgtattca ttttgaaaag
      481 gtttgagtgc atcgcgcatt ttgtggcaca agctgcaata ttcacgaaac atcaaggtca
      541 atttcatccg cgtttcctta tctgtcaatt tgcacacgcc aaagccttag acgcagcaga
      601 atcatggtct atttgggaaa aaacaatgtt ttcaaggaag atgatactca agtcctgcca
      661 aaaacagcaa aaatgccgtc tgaacagttc agacggcatt tccaaaaccg ttttacgctt
      721 gaacgttgat acccgccgta accgtcggtt gcgcattgtg cgccgtcaga aacgaagcgg
      781 caagctcccc gcagcagccg cagcagctcg ctacgcccaa ttgcgactgc aaatcgccca
      841 ttgtggtcgc gccggcggcg atggtttcct tgatttgatg gtcggtaacg gcattgcaga
      901 tgcagacaaa cattttgtgc tccgtgtgtt ctcaaactat cgtaccgata gcggctttta
      961 ttatcgtatg cgaatataaa taaaaacggt tcgcattgca aggtcggtat acacggtttg
     1021 tcttggtaat tttttatcaa gtttgcattt tcgattgatt tcttattaaa ccaaagtaga
     1081 agcctcagtt tcgggaatgg tgttccttca ctacaccctg caaccatacg ttggcaacat
     1141 gggtataaat ctgcgtcgta ttcaaatcgg catgtcccaa catatcctga accacgcgca
     1201 aatccaatcc gtgctgcacc aagtgcgtgg cgaaggcgtg gcgcaggctg tgcgggctga
     1261 tgtgcccgat gcctgcccta cctgcatatt ctttgacaat catccatgcc aactgacggg
     1321 aaatgcccgt ctttttctga ctgacaaaca atgcgtcgca attcctgcct ttcagcagaa
     1381 gtgggcgtgc ctccgtataa tagcgttcca cccaatacgc cgactcctgc cccatcggga
     1441 ccatcctctg cttgtcgccc ttgcccagcg cggtaataca gcccctgtcc aaatccacac
     1501 tgctgaagtt cagcccgacc gcctcgctga cgcgcaagcc ggtcgcgtac atcaattcga
     1561 gcagggcctt gtcccgcaaa ccgtgcggcg tgtcggtatc cggggcggca agcagtcggg
     1621 aaatctgctg ctcggtgatc agggtcggaa tattcttgtc gattttgggc ggtttcagca
     1681 aacgggtggg attgtccgtc cttatgcctt cacgctccat ccatatatac aggcgtttgc
     1741 atgccgataa tgcgcgcgcc tgcgaactcc gttgctctcc gtcaacataa accgccgccg
     1801 ccaaatccgc ttcgtccgca tccttcagca ttctgcccga ttgggacagg cggcgggcga
     1861 ttttttccaa atcgcgccgg taaccgttta aagtattctg attgagccgc ctgtccaacc
     1921 acagcgtttc aagcagcctg tcgatcaaac cttcttccat accgttccaa acaaatgccg
     1981 tctgaatctt cttcagacgg catggttcac attatcggga aagcgtttcc aatacttcct
     2041 gcgcgtgacc cgccactttg actttccgcc attcatgggc gatttctcca tccttattca
     2101 agacgaacgt actgcgctcg atacctaacg actctttccc gtacagtttc ttcaatttga
     2161 tgacatcaaa caggcggcac actgtttcat ccttgtcgct caacagctcg aaccggaaac
     2221 cctgcttggc gcaaaaattc tgatgcgcct ttacgccgtc gcgggaaata ccgaccacgg
     2281 tataacccaa tgcctcaaac tgttccaaac gcgcattgaa atccaagcct tccgtcgtac
     2341 agcccggcgt actgtctttc ggataaaaat acacgaccaa aggcagatgt tctgccgaat
     2401 gaaaatccgc accgctgctc gaaggcaggg taaattcata tttcacatcc atagtcctac
     2461 tcccgatatt cccattattc aaaacggcac gcagaggcac cgccgcaatt gccaaaccaa
     2521 ccccgattct accgccccaa aggacaagga ttcaaccgcc ggaaacatcc aaaccgacac
     2581 acgacggcat gaaaaatatc catgtcaaac cacaaaatat gttccgattt aaaaacagaa
     2641 tgttataaaa cccaatcccc aaaacacaac aagaccgccc gcctacgggc agtctcctgt
     2701 cagacgacat actttacaga tggctgtttt ttcaacaaaa taacgccaat actcaaaaat
     2761 atggaatcaa aaatgtccat ccatactctg aaacgcctgc cctcatcgct gctgctcggt
     2821 ctctgccttt ccctgccgtc agcccacctt tttgccgaca acgacatttt agggcaattt
     2881 ttagaacaga acatgcttac ctcctccgat ccgatagaaa tattcgccga aagcacgata
     2941 caccccacca acacccaagc cattacaggc ggtctgattc tctcctcaca gtctgccctg
     3001 gtcgtcaaca acaaaaccgg acagatactg tatcagaaaa acgccgacag gattatgccc
     3061 atcgcctcca tttccaaact gatgagcgcg atggtcgttt tggatgcaaa cttggacatg
     3121 aacgaaaccg ttaccattac gcccgacgaa atcgaccgca tcaaagggac cggcagccgt
     3181 cttgccatag gtacggcact tacacgcaaa gaactgctgc acctgagcct gatgagcagc
     3241 gaaaaccgcg ccacccatgc attgggcaga acctaccccg gcggcatggg cgcatttgtc
     3301 gccgccatga accgcaaagc ccaaagcctc ggtatgtacg gcagccgctt ttacgaaccg
     3361 accggactca acttccaaaa cgtttctacc gccaaagact tgagccttat ggtcaacgcc
     3421 gccgcccaat atccgcaaat ccgcaccaac tcgacttcca actacgcctc ggtacagacc
     3481 aaaaacgggc agcagaacta caaaaactcc aatgccctgg tcagagaagg catgtggaac
     3541 atcgaattgc agaaaaccgg ctacatacgc gaagcaggca ggtctatggt tgtcaaagcc
     3601 aacattcaaa atcaacccgt taccatcgta ttgctgaact cgcccacatc cgccacacgc
     3661 gtcaacgacg cccgcaaaat cgaatcgtgg atgctgcagc aacgctcctg acatacaaat
     3721 gcccggcgga aaaccgccca aacacaaaaa aaattggtaa tttttcctat tcaaggctac
     3781 aattcgacac gcacagggca tctgcccgat ttcacaatca taatagcgga gttaaaaata
     3841 tgacagctaa aggacaaatg ttgcaagatc ccttcctgaa cgccctgcgt aaagagcatg
     3901 ttccggtttc gatttactta gttaacggta tcaaattaca aggtcaggtt gagtctttcg
     3961 atcaatacgt tgttctcctg agaaacactt ccgtcaccca aatggtttac aaacacgcca
     4021 tttccaccat cgtaccggca cgctccgtca acctacaaca tgaaaacaga ccccaagccg
     4081 caccgacttc gaccctcgtc caagtggaaa ccgtccagca gcctgccgaa taatccgcac
     4141 gaagcatgac gtgtcatatc tttcaatacc ttaccggaca acggtaaggt atttttattt
     4201 tcagacagca tttaaaaatg ttattgcaaa acatccttcc attcgcccat tgccttttgc
     4261 ggaaggcact tcccgaaggc ggcaatgctt tggacggcac cgccggcaac ggacacgaca
     4321 cccttttcct cgcacaaacc gcaggcatcc gggggaaagt gtgggcattc gacatccagc
     4381 cgcaagccct gagccgcact cgatgccgtc tgaaagaagc gagatacgag aatgtgcaac
     4441 tcatcttaga cggacacgaa aacctgaaac aatatgtttc agaaccacta aatgccgcca
     4501 ttttcaactt tggctggctg cccggcggag ataaaagcct taccacccgc acggaaacca
     4561 gcattgccgc cctttctgcc accttatccc tactgaaaga aaacggtatg cttattgccg
     4621 tcctctatcc gggacacgaa aacggcaaac aggaggcaga agccgtcgga caatgggcaa
     4681 aaaacctgcc tcaagaacag tttgccgttt tacgttacgg ctttaccaac cggaaaaaca
     4741 gcccacccta tctgttggca tttgaaaaac tgcgtcaaaa ataactgttt gcggtaaaat
     4801 aagccgattc taacccttat tttgatacga gccgaccatg cagtatctga ttgtcaaata
     4861 cagccatcaa atcttcgtta ccatcaccat tttggtattc aacatccgtg ttttcctact
     4921 ttggaaaaat ccagaaaagc ccttggtcgg cttttggaag gcactgcccc accttaacga
     4981 caccatgctg ctgtttacgg gattgtggct gatgaagatt acccatttct ccccgttcaa
     5041 cgcaccatgg ctcggcacaa aaatcctgct tctgctcgcc tatatcgcat tgggtatgat
     5101 gatgatgcgc gcccgtccgc gttcgaccaa gttctacacc gtttacctgc tcgccatgtg
     5161 ttgcgtcgcc tgcatcgttt accttgccaa aaccaaagtc ctgcctttct gaaacaccgt
     5221 tatgaacaac agacattttg ccgtcatcgc cctgggcagt aatcttgaaa accctgccca
     5281 acaggtacgc gccgcattgg acacgctgtc gtcccatccc gatattcggc ttcatcaaac
     5341 ctcgtccctg tatgccaccg cccctgtcgg ctatgacgac cagcccgact ttgtcaatgc
     5401 cgtctgcacc gtttccaccg atatggacag catctcgctg ctctccttgc tcaaccgtat
     5461 cgaggcggat ttcgggcgca aacgcagttt ccgaaacgcg ccgcgcacat tggatttgga
     5521 cattatcgac tttgacggca tctccagcga cgacccccgc ctcaccctgc cgcatccgcg
     5581 cgcacacgaa cgcagtttcg tcatacgccc tttggcagaa atcctccctg attttgtttt
     5641 aggcaaacac ggaaaagttg ccgaattgtc aaaacaactg ggcaatcaag gtatccgtct
     5701 tttaccggac aggtaattcc gcacacagat gccgtctgaa agcctttcag acggcatttt
     5761 taccctgccg ccaatctgta cgcaaaaaaa atcgcccctt gaaaaagggg cgcaaaagga
     5821 acacaaacca ctaccaaaac tttaaatctg caacactgcc tgccgcatac tgtatccgac
     5881 aggatataaa gccctcacca aatcgtttcg agaaatccaa acttcttcat cgccgacaga
     5941 aaacctgcct ttctccggca ccagctccaa caaaaacggc tgaaccgccg tatgcagctt
     6001 gtctttacac cgccccatct ttctggacaa cgcggacagg gcgcgtttgt aggcactatc
     6061 cttgcggtca agctcccgcg cactgccgac ccagctcaaa cgcaggccgc ggctttcatc
     6121 ctcaatcagc aaaatgcctg ttttgacttc ccccacctcg ggctcgcatg aaagcgcaat
     6181 ataatatttg ccgtcgatgt tgacatacgc cgcttcatgc acctgacagt tgcagccgga
     6241 agtggcaagc agcgaataaa cagagtcccg atgcagtttc aaaatatcaa gggaaatctg
     6301 tttgaaaata ctttccggca tttttccctc ctttcgtctg ctgcgttgtt tactggattg
     6361 actgcattat acagacatct cccaatcttg caaatgataa ttgttcctat tttttaaaaa
     6421 atttataaat tattgataga tatgtgaatt aattttaaga tttaaaatct ctttctcaaa
     6481 aaaacacaaa aatgccgtct gaaacgtgtt cagacggcat tggctgcaca ggcaatccgt
     6541 ttaaaatttc acgcccttat gcagcgcaac gatccccgca ctcatattat gatagtccac
     6601 actgtcaaat ccggcatcca gcatcatttg ctttaaagtt tcctgatcgg ggtgcatacg
     6661 gatggattcg gcgagatact ggtagctgtc cgcatctttg gcaatcagtt tgcccatgac
     6721 cggcagcagc ttgaacgaat agaaatcata cgcgccttcg agcggcttgt agattttgga
     6781 aaactccaac accagcaacg tgccgccagg tttcaaaaca cgatacatct ctttcagcgc
     6841 ggcatcttta tgcgtcatgt tccgcaagcc gaacgccacg gaaactaagt tgaaataatt
     6901 gtcagggaaa ggcagttttt ccgcatcggc aagcgacacg ggcaaaatca tgccttcgtt
     6961 caacagacgg tcgcgcccga cggtcagcat agaggaatta atatcggtca gccaaacctc
     7021 gccttccttg ccgacccgtt tcgcccaacc gcgcgacaaa tcgcccgtac cgcccgcaat
     7081 gtccaacact ttatcgcctt ttttcaggtg cgccatgttg atggtgaaat gcttccacac
     7141 cctgtgcagc cctgccgaca tgacatcatt cataatgtcg tagtttttgg cgacggagtg
     7201 gaacacttcc gccactttgc cggctttttc atcttcgttg accgtgctaa acccgaaatg
     7261 cgttttttgt ccgcccatat tctaaccacc tccctgatac cgccctacgg catcccaaac
     7321 ttaacaatct gattgctttt caaaacgcga cgcgcccgcc gccgccaatt tgtccaaata
     7381 ttcctgccac atcgcatcgt atccgtatgc cagtctgtgc agatacgccc aatcgtaaag
     7441 accgctgtcg tgcccgtccg aaaaactgat tttcagcgcg tactgtccga caggctgcaa
     7501 atccgtaatt tgcacatctg ccttaccggt ctgcaaaaca tcctgtccca caccgtgtcc
     7561 gcgcacttcc gcactcggcg aatagacgcg taaaaattcg gcaggcagat ttttaggttc
     7621 gtccccataa gtcaaaacca acacggtacg gtttttcaac aaacggattt caacaggaat
     7681 attattcaaa aaacacctcg gttcggcata caatatccgg caggcgcagg cgtgccttca
     7741 aacggcgcgt attttaacag ctttatcccg ataccgatat tcaaacccac actttaaacg
     7801 gcattgatat ggacaatctc gtatgggacg gcgttcccga catccgcaca ctcgaccaaa
     7861 ccatccgcaa acacgcacac ccgctcaacc tgattgtctg cctccccgat aatcagattc
     7921 ccgattttca aaccgcacaa gatgcttcgg acgcggaatg ccgtctgaag caccgtttgg
     7981 atcaggcaac gcagtgcctc cagttcgaca gcatcaacct catcgaacac atcctgcccg
     8041 atgtccgctt ctggctggtt cccccttcac gcacccgccg cctgcacgaa cacttccacc
     8101 acatttcctg gcagaccgaa gccatcccgc aaaccgaaag caaacccgac aaaccctggt
     8161 ttgcacttcc acaaacatcc gaacggcaaa aaccggaaca catcctcgtt atcggcgcgg
     8221 gcatatccgg cgcggcaacc gcccacgcct tagcatcaca cggcatttcc gttaccgtat
     8281 tggaagcccg aaaagccgcc caagccgcca gcggcaaccg ccaagggctg ctctacgcca
     8341 aaatctcgcc gcacgacacc gaacaaaccg aactgctgct tgccggctac ggctacacca
     8401 aacgcctgct cggacacatc ctgcccgaat ccgaaacctg gggcggcaac ggcatcatcc
     8461 acctcaatta cagccgcatc gaacaacaac gcaatcacga attgggtttg caaaaacacc
     8521 ataaccacct ctaccgcagc atcacgtctg cagaagccga aaaaatcgcc ggtatcccac
     8581 tgtccgtccc atacgaccac ccttcatgcg gactctactg gcaacacggc gtatggctca
     8641 atccacccgc attcgtccgc gccctcctca accatccgct cattggacta cacgaagaca
     8701 caccgttaac cgacatttcc cacgacgggg aaaagtggat tgcaagcacg ccaaacggca
     8761 tattttccgc cacacacatc atctactgca ccggcgcgca cagctcctgc ctgcccgaaa
     8821 ccaacctcgc cgccctgcct ctcaggcaaa tacgcggaca aaccggcctc acaccatcca
     8881 ccccgttttc cgaacaactg cgttgcgccg tttcaggcga aagctacatc agcccgtcgt
     8941 ggcacggact gcactgctac ggcgcgagtt ttattcccaa cagcagccat accggatgga
     9001 acgaagccga agaagcctca aaccgccaag cattggcaca gcttagcccc gccctcgccg
     9061 aatcattgtt tgccgccaac ccaatccccc aaaaacacca agggcacgcc gccatgcgct
     9121 gcgacagccc cgaccacctt cccctagtcg gcgcactcgg cgacattgcc gctatgcaac
     9181 aaacttacgc caaactcgcg ctggacaaaa actatcgcat cgacgccccc tgcccgtacc
     9241 tgcccaatgc ctacgccaac accgcccacg gcacacgcgg gcttgccacc gcccccatct
     9301 gcgccgccgc cgttgcagcc gaaatcctag gcttgcccca tcccctctca aaacgcctgc
     9361 gccacgccct acaccccaac cgcaccatca tccgcgccat cgtcagaagg aaggatctaa
     9421 ccccttaagc ctttgccgca tgccgtcccg accacagaaa atcatattca aataaacata
     9481 ccaatcctga cggtaaaata tcgaaaacac ccataacgtt ttcttcccaa aataaggagt
     9541 aaggaatgcc taacaaattg cctttgctgt ccaagatgaa tattccgtaa cattcgaaga
     9601 cttccttaac cctgccagcc gtttcggttt ctgtaccccc tgttagataa ggaaggaatg
     9661 aaaaagccct gttgattgta tgaagtaaag ggcgttaatt tttgttaatc ttcccttctc
     9721 aggaactcaa tatataagga tgttaatttt tatttccctt ctcgaggac
//
LOCUS       DAWGBY010000065         9716 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.065, whole genome shotgun sequence.
ACCESSION   DAWGBY010000065 DAWGBY010000000
VERSION     DAWGBY010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9716
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.065"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(121..4290)
                     /locus_tag="WHG62_001346"
     CDS             complement(121..4290)
                     /locus_tag="WHG62_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ1725447.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISLFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGAAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRINPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTLWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNINRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4345..6192)
                     /locus_tag="WHG62_001347"
     CDS             complement(4345..6192)
                     /locus_tag="WHG62_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ1725448.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAS
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKAYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDIDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGAFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNANVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6722..7951
                     /gene="sstT"
                     /locus_tag="WHG62_001348"
     CDS             6722..7951
                     /gene="sstT"
                     /locus_tag="WHG62_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ1725449.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGSGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8063..9343
                     /locus_tag="WHG62_001349"
     CDS             8063..9343
                     /locus_tag="WHG62_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ1725450.1"
                     /translation="MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNAGNTAAQGTNQAENNQVGGSQNPAPSSNPNATNGGNFGRVDLANGVLIDGPSQNI
                     TLTHCKSDSCNGDNLLSEEAPSKSEFEQLSDEDKIKKYKKDGEKFTGLVADRLQMKGT
                     NQYIIFYKPKTTSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNI
                     FAPEGNYRYLTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHTENGRSYP
                     TKGRFAAKVDFGSKSVDGIIDSGDDLHMGKQKFKAAIDGNGFKGTWTENGGGDVSGRF
                     YGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9420..9635)
                     /locus_tag="WHG62_001350"
     CDS             complement(9420..9635)
                     /locus_tag="WHG62_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725451.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9628..>9716)
                     /locus_tag="WHG62_001351"
     CDS             complement(9628..>9716)
                     /locus_tag="WHG62_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ1725452.1"
                     /translation="VTMEKDLRRMLLFFKREAYVVILERDRV"
BASE COUNT         1951 a         2482 c         3004 g         2279 t
ORIGIN      
        1 tcctgatttt tgttaattca ctatatcgat tctgttccct tgcaggcgga cggcggcggc
       61 ggacggtgga aaagcaggtt ttcaaatgtc cggtttggcg gcgcgccgtc tgaaaaccgc
      121 ttattttcct ttgctgtttc cggcggagtc ttttttgtcc gaaccggaga agcggtcgaa
      181 acgtatggtg tatgtcagct cgccgcccga cgaacggctg ccgatacggg caaccgcctg
      241 tatggcgcgg gtcagccggt aaatcagttt gacggactgt tccgcgctgg agatgctgta
      301 ttcgtagccg atgtagagtt tgccggtcag ttgtttgccg acggtcagca cctgttcggc
      361 ggggttgagt tcgccggttt gcgcgttgcg gctgcgcttg ctggtaaagc ccaaatcatc
      421 caccagcccg atgcggtcgt tgatttgccc ggcaagcagc gcgcctgcgg ctgcggacag
      481 ggcggcattg tcgccgctgc tgccgctgcc ggcgcggttg aggatgagcc aagagagctt
      541 gtctttttca ctcatcggtt cgtttgccgt cagcgtaatg cgcgggctgt tgaggctgcc
      601 caatatttcc acgcccgcac cgacggggga aaggcggcgt tcggcgcgga tgttgaggtt
      661 ggggtcgttg agcgggccga caaaggagac cgtgcctttg gtaatgtcca aatcctgccc
      721 gtatgcctta taacgccctt tgatgacgcg gaccgtgccc acgccccgca cgcttccgcc
      781 cgattgggcg gtcagggtca gtttgccgcc tatggtaacg tccgcgccgt agccggcgaa
      841 gcggatgccg tcattgaggt ctaaagtcag gttcatattg acggggagcg gtgccgccgc
      901 ctctttttta acttcgccta atacgacgac atcgtcgccg acggacggca tcgaggattt
      961 ttgcgaaccg aacagcccct gatccgtttt aatcatcccg gtaacggata tgcctttttg
     1021 cggcgaatag cgcaggcggg tgttgccgga aaccgtcagg cggcggttag ggcgggacag
     1081 gatgcggtat ttgtcgaaca ccgcgccgat atcgacatcg ggtccgctgt tttccatacc
     1141 gaccgtgccg gagagttccg ccgttccttc gtgccggaat ttcaggctgt cgattaccca
     1201 ttttctgccc gcgatatgcg aacgcagcga gccgttgtcc aagatgatgc cttgggtttg
     1261 gttgcggtaa tagagcttgt cgccgttgat gctgccgccc aagtgcgggt cggcgatgct
     1321 gccgccgagg gttacggcgg cattcaggct gcctttgacg gtttgtccga cgggcaggaa
     1381 gttgcggaat acttcggcat cggcaacggt caggttgagc ctgccgccca aaggcgcggt
     1441 atcgaaagag cggctttgcc cgacggtgat gttgccgttg attttcccgt agttgctgct
     1501 gccgttgacg gcggcattga cggacggaga gccgacccgt ccgccgattt gcgcggcggc
     1561 attcaggctg ccggtaatgt tttgcgcggc ggcgggcaga aagggcttca atgtgcccaa
     1621 gtcgggaagg gaggcggtaa tcctgccgcc gagcggtgca tttgccatat tgccgccgaa
     1681 ggcgttgccg atgtccaaat cggcgttaat ccgcccgaaa cgtgcgccgc cgtcaagcag
     1741 gattccgata cggtcgtttt gaaagcgcgt tttcagggaa aatgcgttca aacccaaagc
     1801 ctgcccgccg ggcaatacgg catcgccgct ttgccgattg atattgaggt agccgcgcgc
     1861 gttgcgcccg taggcgacat cccagtcgcc gtttaaaacc agattgtgtt cgaagggcgg
     1921 tttgaagaaa ttgtgcaact cggcgatatg cagacctcgt gcgccgcctt ttgccgatat
     1981 gccggttttc ctgtcccagg aaaagtgttg caggttgagg ctgccgccca tagcctgcca
     2041 atttgccgca cttgccgcca cacgttccgc accggcttcg agcgtcatac ggttttgcag
     2101 ttttaggttg aatgcgccgc cgatgtcgag gatgccgatg ctgcccttcc atagggtaag
     2161 ttccctgttg atgccgcctg aagcgtccaa atcgaatttg aacggtttgc catccagcgt
     2221 catggcggcg tgtgtgcgga tgcggtgctg cacgcccgtg ccgtccagca tcaggtcggc
     2281 ggtatcgaca accgccgctc cgcccgacag cgaaaggcgg ctgcctttga tgtcggcgcg
     2341 tatcgggcgg cttgtgtcgg gcgaaccttt gagcgtgaaa tcgagcgaac ggatgtctgc
     2401 cgccttgccg atgtgcaggt tgcgcgccgc gccggaaagg tcggtttcaa aggttcggat
     2461 gccgccgtcc aaatcgccgg aaaggtgtcc gcgtacattt aaagaccccg cgagtccgaa
     2521 accgaaacgg gataaatcgg gtgcggtgat gttgaggttg agccggtcgc cttttttgcc
     2581 gaagccgccg tctgttttaa taatgttccg ccccagccgc aaatcgacgg cggcacgcgg
     2641 aaggtggcgg gactcgtaaa caatgtcggc actgccggca atcggtacgc cgttgaacgt
     2701 gccgggtaaa aaccgcattt tgcctgtgaa tttctctttt gccagttcgc cggcaaggtt
     2761 tattgagccg ttgatattgc ctgccggaag ttgcggattg atgcgcgaag ggtcgaatgc
     2821 gcgggaacgg atgtccagct tgagcaggcg gtctttaaac agctcgagat agccttgcgc
     2881 ggtcaggctg ccttgcccgg cggcgatgtt gacggtgtcg agcaccagtt tccgctgtcc
     2941 gtttgcgggg tcgcttgcaa tggcgaggct gccgtccgtg cgcgccgtgc cgatgccgag
     3001 ttgccaagag attttgggcg aggcggtcgt gccaccgatg ccgatgctgc cgtccaacct
     3061 gcctttgaac gcggtttgca gtacgtcttc cgcgccgacg gagttgatgc ctatatttaa
     3121 atcgaggatg tctttttcgg tgtcgatttt gcccgacagc ctgatgccgc cccgtccgag
     3181 cagggcggcg gacgtattgc cgatatgcac cgtgccgtcc tgccggatga caaagccgcc
     3241 taaaacctga cggacgggga tgccgttgcg gtcggcaaaa ccggctttgg tgttttccaa
     3301 atcgagcgag ccttccagcg cgatgccgtc tgaaaacgac gggatggcgg tcaggtcgaa
     3361 attcagcccg gcatcgggca gggaaggtac gaaggcggcc ggattgatgt tgaacccttt
     3421 gaccagtact tcttccaatg ttttatccaa tgattcggca aacgggtgga tgacggattt
     3481 tcccgagagg cggatattgc cgccgtcgat cgccagttcg gcgcgcacat ccttcaggct
     3541 gccgctcagc cgagccgtac tgtgtatggt tttgccttcg agtccgcctt tggtgtaaat
     3601 ggcggtatcg agggcaaacg gttttttcaa gccgaccgag gccgcccccg acgaactgct
     3661 ccacggcgtg tcggcggcct tcaggtcaag gcggtgtcct ttgcggtcgt aacggtatga
     3721 agcatccagc cgttcgagat agacggtttg tttgtcaaag gctttgccca tgctgatttt
     3781 gcccgtctcg aagcggtcga gatagacggc ggcaggcagg tctatgctgt cgggaaggct
     3841 gagcggcggg cgttcttctt taggcggagt cggtttggta acgatggcga tgtcgccggc
     3901 ggaaatttcg gtaatgtgca ggctgcggcg catcagttcg gacggtttcc acgcgaagcg
     3961 gaagaggctg attttaaggt ctgccccctc ggtttctatc gaccagttgt cgccgtcgaa
     4021 gccgtcgagc agcgtgcctt tgagattttg ggaggaaatg tttacaccga accaagacgg
     4081 gatttggtac agcccgaagc gcaaacccgc ttccgtaccg gcgagccagc cgaggaaaca
     4141 tactgccaaa atcaggacag acagcagtgc cgccgacagc ttcagcagcg ggcggcgttt
     4201 ttttgccggc ggggtggggc ggtgttcaga cggcattttg cgcgtgccgt tttcggtcgg
     4261 atcggtatct gtcggtgcgg tatcggtcat aatgtctgtt tcaaaatagt ttgctgcaat
     4321 gccgtctgaa gcggccgtat cggtttagaa gcgtgttccc aagctgatgt gccagcggat
     4381 tttcttatcg ctgtgcccgt aggcgatgtc gaaggaaaac ggcgcgagcg ggctgaacca
     4441 gcgcacgccc agtcccgaac cgtgtttcag cttcatacgt ttgaaattgg cggcggcatc
     4501 gcccatatcg tggaataccg cgccggaaag ggtgcgcgta aacggcagtt ggtattccag
     4561 gctgcccacc aagagggcgc gttcgggcag gaccgatccg ttcgggccgg caagcccgat
     4621 gctgtcgagt tcgtaaccgc gcacggaaga cgcgccgccg ctgcggaaca tcagccctga
     4681 aggaacgttg gcattgtcgc gggcaacggt gtaacccgct tgtccgcgta tgatgaacgt
     4741 gccgagtttt ttgttttcgg gcgtgaagaa ataacctgcg cgggcagagg tgcggatcag
     4801 cgcggtggag gacaggaatg cgcccaaagt cgtaccgatt ttgccgtcga ggtaatggcc
     4861 gttttcggga tgcagcacgt tgttgagcag ctggcgtttc caagaggcgg tcagcatcgt
     4921 ggcgtggctg ttgcccaaat cgatatccga gccggggatt ttccggcctt ctgcgagaaa
     4981 ctccgccccc agcctggcat cgatgcccgc gcggtcgcgc acataccaga tgccgccgga
     5041 gaaggcgcgt ttttcgaggt tttgggtggt cgaacggttg taggaaacgt tgcttgtcca
     5101 gtagttgccc cgatagttgc gcggctggct gatgccggcg gcaagcgtgg tttcgtattt
     5161 gtccatatcc cagacgaccg aaccgatata gcctttgttg aagaggttgt aatagtcgta
     5221 ggcgattttg ccgcccaaac cgtattccga atcgaggcgg atgccggttt cgagcttgtg
     5281 gcgtttgacc tcggttacgc tgactttgac ggggacgcgg tcgccttgga ggcggtcgaa
     5341 gtcggcttgt acggacgcgc cggaataatg cccgttttgt tcgagcgcct gttggaagtc
     5401 gagcagcagg tcgaggtcgt agggcgtgcc cggttggaag cgcgccaggc cggagacgat
     5461 ttgttcgggg taacgctgcg tgccggtaat ttcaaagtcg ccgaaggcga tggggcggcc
     5521 gctgtccacg acgacgttca aatcggcggt ggcggtatcg gggttgacgg ccgcccgggt
     5581 gttgccgagc ttggcaagcg ggtaggcttt gcgcgttacc gcgccgagga cggaagtttt
     5641 gctgttttcc caactgtcct gatcgaaatc actgcctacc ggctgctgcc agttttccag
     5701 cgcgttgcgg tagtattcgg cgaggttgcc gtctgaaagg atgtcgccga ggatggcgac
     5761 gccgacgttg gcgattttgg tgcgcgggcc cggtgtgatg tgtaccgtat aagctccgtc
     5821 tttttccgtc aggctgactt tgctgctgaa atagcctttg ctgcggagca tcgttttaac
     5881 gttgtccgat gcttcttcgg cgaggaagcc cgtctgttct ttgtccaata cttcttcctg
     5941 ctgctgcgtg atgagcggca ggtgttcttc gaccatatct ttgatttcac tgtcctgcgt
     6001 gtcgatgcgg acggggaatt tgggttttaa tttgactgat tcggtgtcgg ggcttttgtt
     6061 tttgaacaat gcgaaacccg ccgccttgtt ttcggaaagg tcggcggcag gcgcgtatgc
     6121 gtgcggaaag aaaaataaag ccggcaggag cagggcggtc ggtttgatca tcatggtacg
     6181 ggtatcgtgc atcggtgtgg cggatttcga ttctaacact gttcggacgg ggcgggacgc
     6241 ttcagacggc atactgccgc cggtatttcg gaggttgcgg cccgctggaa atgtatctgc
     6301 ttgttttaag gtattttgtt tctaatccgc atatggaaaa caggctgcgt ttcggaatag
     6361 tgtcggaaaa taaacgggat taaataaatt tattttcgtt caataaatta aaccgtcgcg
     6421 ccgaatgata aagcaaagcc tgtccggcac tgcatagggc aaatcaacgc aaccttcata
     6481 gtggattaac aaaaaccagt acggcgttgg ctcgccttag ctcaaagaga acgattcttt
     6541 aaggtgctga agcaccaagt gaatcggttc cgtactattt gtactgtctg cggcttcgtc
     6601 gccttgtcat gatttttgtt aatccactat aaaacacagc cgaaaaataa aaaaaacaca
     6661 gagaatgagt tttcttttaa aatacaacat tttttaacat atcacaacat aaggaagaat
     6721 tatggcgttc ggcaaatcct tatttcatgc gatcggccgc gtcagcctgg tcaggcagat
     6781 tgccgccggt ttggcgttgg gcatcgtaat cggttcggtt tccccgcaac tgggcttggc
     6841 ggcaggcttg ttcggcagcc tgtttgtcgg cgcgctcaaa gcggtcgcgc cggttttggt
     6901 atttattttg gtggcggcca caatcgcgca gcaccaaaaa ggcaacaagg cgcatatcag
     6961 gccgattatc atcctttacc tcatcggtac gttttccgca gccctgaccg ccgtcatcgc
     7021 cggtatggtt ttcccgacgc acattgtttt ggcgggctcg ggcgatgtgt ccgccgcgcc
     7081 gccttccggc attgtggaag tattgaaatc gctgctgatg aacctggtcg ccaacccgat
     7141 taacgcgatt gccaatgcca actatatcgg cattttggct tgggctttgg ttttgggcgc
     7201 ggcgttgcgg aatcacggtt cggacgttac gcggcaggtc gttgccgatt tggcggaagc
     7261 ggtttccacc gtcgtgaaat ggattatccg ttttgcccct ttgggcattt tcgggctggt
     7321 gtcgtccaca atcgcggaga cgggtttcgg cgcgctggcg gggtatgcga agctgcttgc
     7381 ggtgctgttg ggctgtatgg cgtttatcgc gctggcggtc aatcccgcca tcgtgtggtg
     7441 gaaaatccgc cgcaaccctt atccgctggt gtttacctgc ctgcgcgaaa gcggcgtgta
     7501 tgccttcttt acccgttctt ccgccgccaa tatccccgtg aatatggctt tggcgaaaaa
     7561 actggggctg cacgaagaca cttattcgat ttccatcccg ttgggggcga ccgtcaatat
     7621 gggcggcgcg gcgattacga ttaccgtttt ggctatggcg gcggcgcaca cccaaggcat
     7681 acaggttgat tttgccaccg cgctgctgtt gagcctggtg gcgacggtca gcgcgtgcgg
     7741 cgcgtccggc gtggcgggcg gttcgctgct gctgattccg ctggcgtgca gcctgttcgg
     7801 catcagcaac gatgtcgcca tgcaggtggt tgccgtcggc tttatcatcg gcgtgattca
     7861 ggattcggcg gaaacggcgt tgaattcttc aaccgatgtt ttgtttaccg ctgccgccga
     7921 tttgggccga cagagaaacc gggcggaata aaccaagcta tgccgtctga agcccgtttg
     7981 gcgttcagac ggcatatttt tacaatttta tgggtatatg gcggaaacaa taccggctgc
     8041 cttgaatatg aaggggatga tgatgtttaa acgcagtgtg attgcaatgg cttgtattgt
     8101 tgccctttca gcctgtgggg gcggcggtgg cggatcgccc gatgttaagt cggcggacac
     8161 gccgtcaaaa ccggccgctc ctgttgttgc tgaaaaagag acagaggtaa aagaagatgc
     8221 gccacaggca ggttctcaag gacagggcgc gccatccaca caaggcagcc aagatatggc
     8281 ggcagtttcg gcagaaaata caggcaatgg cggtgcggca acaacggaca aacccaaaaa
     8341 tgaagacgag ggaccgcaaa atgatatgcc gcaaaatgcc ggcaatacgg ctgcccaagg
     8401 tacaaatcaa gccgaaaaca atcaagtcgg cggctctcaa aatcctgccc cttcaagcaa
     8461 tcctaatgcc acgaatggtg gcaattttgg aagggttgat ttggctaacg gtgttttgat
     8521 tgacggaccg tcgcaaaata taacgttgac ccattgtaaa agcgattctt gtaatggtga
     8581 taatctatta agcgaagaag caccgtcaaa atcagaattt gaacaattaa gtgatgaaga
     8641 caaaattaag aaatataaaa aagatggaga aaagtttacc ggtttggttg ctgataggtt
     8701 acagatgaaa ggaaccaatc aatatattat tttttacaaa cctaaaacca cttcatctgc
     8761 gcgattcagg cgttctgcac ggtctaggag gtcgcttccg gctgagatgc cgctgatccc
     8821 cgtcaatcag gcggatacgc tgattgtcga tggggaagcg gtcagcctga cggggcattc
     8881 cggcaatatc ttcgcgcccg aagggaatta ccggtatctg acttacgggg cagaaaaatt
     8941 gtccggcgga tcgtatgccc tcagtgtgca aggcgaaccg gcaaaaggcg aaatgcttgc
     9001 tggcacggcc gtgtacaacg gcgaagtgct gcatttccat acggaaaacg gacgttcgta
     9061 cccgaccaaa ggcaggtttg ccgcaaaagt cgatttcggc agcaaatctg tggacggcat
     9121 tatcgacagc ggcgatgatt tgcatatggg taagcaaaaa ttcaaagccg ccatcgatgg
     9181 aaacggcttt aaggggactt ggacggaaaa tggcggcggg gatgtttccg gaaggtttta
     9241 cggcccggcc ggcgaggaag tggcgggaaa atacagctat cgcccgacag atgcggaaaa
     9301 gggcggattc ggcgtgtttg ccggcaaaaa agagcaggat tgatgttgat gccgtctgaa
     9361 gcgggggcgt tcagacggca ttgtgatgtt tggggcggcg agtccggttc aagtccgcat
     9421 cagttgataa acccgtcgtc tttcattttc ttttcggaaa aatactggcc gaataccagc
     9481 agggcggcga ggatgatgac aaacagcccc gccatagtca gtgtgatttt gaagaacaat
     9541 tccgcttcga gaaaagaaaa ccagagttgc acaatcagca gcagcaccca gccggcaaac
     9601 agtccgagac aggcataaac gccgagctta aacacggtcc cgctccaaaa tgacgacgta
     9661 ggcctcgcgt ttgaaaaaca gcagcatacg gcgcaaatct ttttccatcg ttacga
//
LOCUS       DAWGBY010000066         9714 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.066, whole genome shotgun sequence.
ACCESSION   DAWGBY010000066 DAWGBY010000000
VERSION     DAWGBY010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9714
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.066"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(38..764)
                     /locus_tag="WHG62_001352"
                     /pseudo
     CDS             complement(38..764)
                     /locus_tag="WHG62_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
     gene            complement(834..1268)
                     /gene="fur"
                     /locus_tag="WHG62_001353"
     CDS             complement(834..1268)
                     /gene="fur"
                     /locus_tag="WHG62_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ1725453.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            1487..1864
                     /locus_tag="WHG62_001354"
     CDS             1487..1864
                     /locus_tag="WHG62_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ1725454.1"
                     /translation="MNKTLILALSALLGLAACSVERVSLFPSYKLKIIQGNELEPRAV
                     ASLRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKDRSNLTVYFENGVLV
                     RTEGNALQNAAEALRVKQNADKQ"
     gene            1874..2683
                     /gene="dapB"
                     /locus_tag="WHG62_001355"
     CDS             1874..2683
                     /gene="dapB"
                     /locus_tag="WHG62_001355"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ1725455.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2680..2925)
                     /locus_tag="WHG62_001356"
     CDS             complement(2680..2925)
                     /locus_tag="WHG62_001356"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725456.1"
                     /translation="MPRKQLYRISFSVETPPLGHLSFGAVESDFIWEGRNPFQIRTTH
                     RATLYVSSRVLKHMPIRSLSAKCRLNNIFSDGILYGG"
     gene            complement(2943..3353)
                     /locus_tag="WHG62_001357"
     CDS             complement(2943..3353)
                     /locus_tag="WHG62_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725457.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPMPNYSEWVKIKFKQFSYLKFIYGYATKNQDKNIKNVLELGELKQDDEILDYGGA
                     LEVIGGRYDLPTGFSIDIVCREIELEFLDQESFN"
     gene            complement(3355..3600)
                     /locus_tag="WHG62_001358"
     CDS             complement(3355..3600)
                     /locus_tag="WHG62_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725458.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGLLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(3608..4780)
                     /gene="lpxB"
                     /locus_tag="WHG62_001359"
     CDS             complement(3608..4780)
                     /gene="lpxB"
                     /locus_tag="WHG62_001359"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ1725459.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     VGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRSGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAACFLLPAATEATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQSEAKPEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(4828..5820)
                     /locus_tag="WHG62_001360"
     CDS             complement(4828..5820)
                     /locus_tag="WHG62_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ1725460.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            6314..9073
                     /locus_tag="WHG62_001361"
     CDS             6314..9073
                     /locus_tag="WHG62_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ1725461.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGSDIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     ASAAETSEKRSTANRSGSRVNNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQGRNVQPAATVADAAPSETEVQTSKRRRNGSRSE
                     RGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         2447 a         3084 c         2274 g         1909 t
ORIGIN      
        1 ccaccatatt tgaacctgac cggagcataa gccgccatca aagccccttg cacgccactt
       61 cgcgccgccc gatttcctct ttcaacggca cggcgttcaa catccgcaga cgttcggcaa
      121 aatccgcaaa cggcagcagc tccgaaccga aacggcgcat atgttccgtg tcctgctggc
      181 agtctatcag ttccacaccc aaatccgcca aaaacggcac ggcgcaggca aacgcgattt
      241 tcgacgcatc cggttgtaat gcgaacatcg attcgccgta aaacaccctg ccgatttgca
      301 cgccgtaaaa gccgcccgcc aacctcgttt caccgctttc atcgggataa tggcactcga
      361 aagaatgcgc gtgtcccatt tcgtgcagct tcaaatatgc cgtctgaaac tcgggcgcaa
      421 tccaagttcc gtcctgattc gggcgcgccg ctgccgcaca atgcgcgacc acttccgcaa
      481 aacagccgtt gaccgcaacc cgatagctgc cgttgcgcag cgttttcgcc agcgagcgcg
      541 gaacgtgcag acgttcggga acaatcaccg cacgcgggcc gaccgcatac caaaaaaaac
      601 caaccgtccc gagaaaacca cggaaacacg ccgttccgat acgcctcgag cagccgcccc
      661 gcatccaaat cgccgctcac gccgaccagc ccgtcgcacc aggccaaagc ataggcagga
      721 tcgggaaagg cataattgtc aggggcaagc agcggaatac gcatggcagt tctccaaaaa
      781 cacagacggc atccaaaatc atgaatgccg tctgaacaac aaaccgtccg gatttaacgt
      841 ttgcccttgg cctgacagtc gctgcacacg ccgtacatat aaagcgcgtg atcgacgatg
      901 cggtagccgt tttcctcagc gattttgtct tgcagggctt cgatttcggg attgtggaat
      961 tccgttacct cgccgcactt cacgcagacg atatggtcgt ggtggtcgcc cttgtccaac
     1021 tcataaaccg ccttgcccgt ttcaaaatgg tggcgttgca gaatgcccgc ctgctcaaac
     1081 tgggtcagca cgcggtaaat cgtcgccaca ccgatttcca caccctcttc caacaaaatg
     1141 cggtacacat cttccgcact caaatgctct tccgcatgcg tctcgaacaa atccaaaatc
     1201 ttcaaacgcg ggccggtaac cttcagaccg ctgtctttca gttgtgcaat attgttgaat
     1261 ttttccataa tattcaatac ccctgtaaaa caatagacgt tataatacgc aatttcggcc
     1321 tgtttgccca ctatcgcacc atagcagttt gcaatagtaa aaccgcaccg gcggccgatg
     1381 cgcggacagg gcggataccg cttaatcgta tgattatcgt tcgcttttat aaaatattca
     1441 agcagtgtta cactacccat cccgatttgc acagaaaggc atttccgtga acaaaaccct
     1501 catcctcgcc ctttccgccc tcctcggcct tgccgcgtgc agcgtcgaac gcgtttcact
     1561 gttcccctcg tacaaactca aaatcataca gggcaacgaa ctcgaacctc gcgccgtcgc
     1621 ctccctccgc cccggtatga ccaaagacca agtcctgctc ctgctcggca gccccatact
     1681 gcgcgacgca ttccataccg accgctggga ctataccttc aacacctccc gcaacggcat
     1741 catcaaagac cgaagcaatc tgaccgtcta ttttgaaaac ggcgtgctcg tccgcaccga
     1801 aggcaacgcc ctgcaaaatg ccgccgaagc cctccgcgta aaacaaaacg cagacaaaca
     1861 ataaggaaca cacatgacac cgctcaaaat cgccatcgcc ggcgcaaacg gccgtatggg
     1921 gcgcgtcctc gtcgaagccg tcaacaacca tcccgacacc gtcctttccg gtgcgcttga
     1981 acactcaggc tcagaagccc tcgggctgga cgcaggctac gccgtcggac tcaaaaccgg
     2041 catcgccatt tcagacgacg ttgacgccgt tctcgcacaa agcgacgtac tcatcgactt
     2101 cacccgcccc gagcccaccc tcaaacacct gcaaaaatgc gttgaaaaac aagtcaacat
     2161 catcatcggc acaacaggct tcgacgatgc gggcaaagcc gctatccaca ctgccgccga
     2221 acaaacaggc atcgttttcg ccgccaactt cagcgtcggc gtcaacctca ccttccacat
     2281 cctcgacacc gtcgcccgcg tgttaaacga aggctacgac atcgaaatca ttgaaggcca
     2341 ccaccgccac aaagtcgatg cccccagcgg caccgcgtta cgcatgggcg aagtcatcgc
     2401 cggcgcgctc ggcagagacc tcaaacaatg cgccgtttac ggccgcgaag gccacaccgg
     2461 tccgcgcgat ccgtcgacca tcggctttgc caccgtccgc gcaggcgaca tcgtcggcga
     2521 ccacaccgcc ctcttcgcca ccgacggcga gcgcgtggaa atcacccaca aagccggcag
     2581 ccgcatgacc tttgccgccg gcgccgtccg cgccgcagtt tgggtaaacg gcaaaacggg
     2641 tttgtacgat atgcaggacg tactcgggct gaacaaccgt taacccccat acaaaatgcc
     2701 gtctgaaaag atattgttca gacggcattt tgccgacagg ctccgtatcg gcatatgttt
     2761 caacacacgg gacgatacat aaagcgtcgc cctatgtgtc gtcctgattt ggaagggatt
     2821 acgcccctcc caaataaagt ctgattctac cgccccgaag gacagatgtc cgagtggcgg
     2881 ggtttcaacc gaaaaggaaa tacgataaag ttgcttgcgc ggcatgacaa gttacggctc
     2941 gtttaattaa aactctcctg atctaaaaat tctaactcta tttcccggca aactatatct
     3001 atactaaaac cggtcggaag atcataccta ccgcctatca cttccagcgc acctccataa
     3061 tccaagattt catcatcctg ctttaattct ccaagttcca atacattttt gatattttta
     3121 tcttggttct tcgtggcgta tccatagata aatttcagat agctgaactg cttgaattta
     3181 atttttaccc attctgaata attgggcata gggatctctt gaggaaagtc cggataatcc
     3241 acattctgga cgatgatatg gaattcatcg tttttcaaag tatagtttaa tagagtgccc
     3301 tcatatatat acagaaattg ataatctttt tttggaatgg tataagttgt catattattt
     3361 taccttttca aaaacaatga gtttaagatt ttttgagtcc aagttggttc tactactctt
     3421 atgaaatttc agttgtttaa actcttcctt taacagacca ttatatttta accttaatcc
     3481 cactcgagcc agttctgctt catttggaat tcctcttaaa tacttattgt ttgatgtgcc
     3541 attaatcaca atttctcccc ctttttttgt aatacgtgct gcttcgggaa aataatccat
     3601 taaccgctca acatcccgcc tcttccaaaa ccgcgcgcgc ggccaaatcc gccgtatctt
     3661 ttttcaacag caggtgcaac gccctgaaat cctgttgcag cgcggcaacc ttatcggggt
     3721 gttcgtacca gtccgccaac gccgccgcca gtttttccgg ttttgcttca gattgcaata
     3781 attccggcac agcctcctta cccaacagga tattcggcag gccgacatgc ggcactttga
     3841 ttttgcgttt cacataagca taagtcagcg gcgaaatctt gtagctgatg accatcggac
     3901 gcttgcacaa cgccacctcc aaagtcgccg taccgctcgt taccagcacc gcatccgccg
     3961 ccctgcacac tgtttcagac tgtctgtcga ttaccgtcag cggcaatccg gcaaactccg
     4021 gccgctgcaa aacttccgcc aaacgccgct tcgtcgcctc cgttgcggca ggcagcagga
     4081 agcatgcggc aggatagcgt tccaacaaca ataatgccgt ctgaaaaaac accggcgcca
     4141 tatagtcgat ttcgctgacg cggctgccgg gcagcagggc gaatacgggg atgccggcat
     4201 ccacgcccaa agtttgccgc gccgtttcac ggtcgtcttc caagggcata agctgcgcca
     4261 tcggatgacc gacaaactcc gcacgtccgc ccgcatcgag ataaagctgc ggctccatcg
     4321 ggaacaggca caacacgcgg ttgacctgat gcacgatttt gcccacacgt tcccgccgcc
     4381 acgcccacac cgacgggctg acataatgca cggtcggaat ccccgaccgt ttcagctttt
     4441 ccgccacacc caaattaaaa tcgggcgcat cgataccgac aaagacatca ggtttcaacg
     4501 acagcaaatc ccgtaccagc cccctgcgta tccgtaaaat ttccggcagc cgcctgacca
     4561 cttcgacaaa gccgcgcacc gccagccgct cctgatcata aaggctctcg aaaccttccg
     4621 ccttcatcag ttcgccgccg ataccgacaa aacgcgcctg cggacaacgc ttgcggatgg
     4681 cgcgtatcag gtgcgccccc aacaggtcgc ccgacgcttc gccgacactg acggcaatca
     4741 aagggctttt tttatcaacc atattcgtct gtccccacat actttcacgt cccgatgccg
     4801 tctgaaggct tcagacggca tcggggttca cattttcgtc ccgttttcca acatcaccgc
     4861 aaactgtgcc aagtccggcg gcagctccgc cttcaacacc agcggctcgc ccgtgagcgg
     4921 atggttcaag tgcagctcgg acgcgtgcaa aaacatccgc ttcaaaccca acttctgcaa
     4981 acgacggttc gcctgataat cgccgtagcg ttcgtcgccc gcaatcggac agccttgaga
     5041 ttgcaggtgg acgcggattt ggtgcgtacg acccgttttc agcgttgccc gcaccaaagt
     5101 caggtgcgac agcccgacac cgtgcaaaat gccgtctgaa aaacggctta acacacggaa
     5161 caccgtgtgc gccgactgcc cgtcctcgct gacgcgtacc atcttttcgc cttgtgcgcc
     5221 ggtatatttg aacaggggca gtttgacatg gaaattgtcg tccggcagtt tgcccacccc
     5281 cagcgcaagg tagatttttt tggggtggtc gttacggatg gcttcgtgaa gtttgacgag
     5341 cgcgctgcgt ttcttcgcca ccatcaacaa gccgctcgta tccttgtcca aacgatgaac
     5401 caactccaaa tacttcgcct ccggacgggc gcggcgcaac tgttcgataa cgccgaaact
     5461 cacgccgctg ccgccgtgga cggcaacgcc ggacggtttg tcgatgacca aaagcgcatc
     5521 gtcttcgtaa acaacgtcaa acgcacgcgc cggtacggcg gcacgccttt cagacggcat
     5581 ttccttctcc gccacgcgca caggcggaat ccgcaccgta tccccctccg caatacggct
     5641 gtcgggtttg cagcgtttct tgttcaaccg cacctcgccg gcgcggataa tgcggtggat
     5701 atggctcttg ggaacaccct tgaggatttt tatcagatag ttatcaaggc gttgacccgc
     5761 ctcatgttcg gcaaccccta tcaagctgac cgaatctttg cttatttcgt gcgttttcat
     5821 ctataatccg aacatccgtt tcagcaaaaa gcgcgcccgc cgcgcccccc tgaaacggtt
     5881 tactttaaaa cggaatttta tattaaaaac gcactccgca aagcattttc cctgcgcctg
     5941 ttcccagccg gcaggcgcag aacgtaatca agtttgaatt gattttgccg tttcggcgcg
     6001 gaagtaagac ggcagccggg ccccaagtcc caaacgcaaa ccgcccaaaa cacaggcatc
     6061 acgataacaa gaagaagccg gcccccattt ttccgaccgc agcgttcgga acgcggcaga
     6121 caaaccgccg catcgatctt tatagccttc tgtatccgac ccttccgcac acggttctcc
     6181 ggaacgtgca tccctgcgga ttttcaactc aaaaactgat taccggtttt atccgaaaac
     6241 atcggaaaac ccagccttac ggaatgccga accggaccgg cgcgcccgaa tgccgcccgt
     6301 ccacgaggtg atcatgaaaa gaatgttatt caacgcaacg caggccgaag agctgcgcgt
     6361 tgccatcgtc gacggacaaa acctgctgga tttggacatc gaaacgctgg gcaaagaaca
     6421 gcgcaaaggc aatatctaca aaggcatcat tacccgcatc gagccgtcgc tggaagcgtg
     6481 tttcgtggat tacggaaccg accgccacgg cttcttgccg tttaaagaag tctcccgctc
     6541 atacttccaa gactacgaag gcggacgcgc gcgcatccaa gacgtgctca aagaaggcat
     6601 ggaagtcatc gtccaagtcg aaaaagacga gcgcggcaac aaaggcgcgg cgctgaccac
     6661 cttcatcagc ctcgccggac gctatctggt attgatgccg aacaacccgc gcggcggcgg
     6721 cgtatcccgc cgtatcgaag gtgaagagcg tcaagagttg aaagccgcca tggcggaact
     6781 cgacattccg aacggcatga gcatcatcgc ccgtaccgcc ggcatcggcc gcagcgcgga
     6841 agagttggaa tgggatttga actatctcaa acaactctgg caggcgattg aagaagcagg
     6901 aaaagcgcat cacgaccctt acctgctctt tatggaaagc tcgctgctca tccgcgccat
     6961 ccgcgactat ttccgccccg acatcggcga aattctggtg gacaatcaag aagtttacga
     7021 ccaagttgcc gagttcatga gctacgtcat gccgggcaat ataggccgtc tgaaactcta
     7081 cgaagaccac acgccgctgt tttcccgctt ccaaatcgaa caccaaatcg aaagcgcgtt
     7141 ttcgcgcagc gtcagcctgc cctccggcgg cgcgatcgtc atcgaccata ccgaagccct
     7201 cgtctccatc gacgttaact ctgcacgtgc cacacgcgga tctgacattg aagacactgc
     7261 gttcaaaacc aatatggagg ccgccgaaga agtcgcccga caaatgcgcc tgcgcgactt
     7321 gggcggtttg gtcgtcatcg acttcatcga tatggaaaac cccaaacacc agcgcgatgt
     7381 ggaaaacgtc ctgcgcgacg cgctcaaaaa agaccgcgcc cgcgtgcaga tgggcaaact
     7441 gtcccgtttc ggccttttgg aattgagccg ccaacgtttg aaaccggctt tgggcgaaag
     7501 cagccatgtt gcgtgtccgc gctgtgccgg caccggcgtg attcggggca tcgaatccac
     7561 cgccctgcac gttttacgca tcattcaaga agaagcgatg aaggacaaca ccggagaagt
     7621 gcgcgcccaa gtgcccgtcg atgtcgccac cttcctgctg aacgaaaaac gcgccgagct
     7681 gtttgcgatg gaagagcgtt tggatgtcaa cgtcgtcctg attccgaaca tccacctcga
     7741 aaacccgcac tacgaaatca accgcatccg caccgacgac gtagaagaag acggcgaacc
     7801 gagctacaag cgcgtcgccg agcctgaaga agacgaatcc gccaaaccgt tcggcggcga
     7861 aaaagccaaa gccgcccgcc ccgaacccgc cgtcaaaggc gtgcgccaca ccagccccgc
     7921 cccgactgcc gcccccgaga aaaaaacctc ctggtgggac agcttcaaag cttggctcaa
     7981 acgcattttc ggcggcagcg aaacccaagc cgcgtccgct gccgaaacct ccgaaaaacg
     8041 cagcacggca aaccgcagcg gcagccgcgt caacaaccgc cgccaaaacc cgcgccgcag
     8101 caaacgcgaa ggcagcaaag tagaagtccg cgaagtggca ggcaaaactg ccggacagga
     8161 agcgcgcgcc gacaaagccg aaacgcgcaa caacggcaac cgccgccgca acgaacgcgg
     8221 cgaccgtgcc gccgaacgcg ccaacgaagc ggaaatccaa ggtcgcaacg tacagcctgc
     8281 cgcaaccgtt gcagatgccg caccgtccga aaccgaagtg caaaccagca aacgccgccg
     8341 caacggcagc cgcagcgaac gcggccaaac cgcgccggaa accgccaccg ttgccgaaac
     8401 aaccgttcag acagcggaaa acacgccgtc cgaaccgcat accgcagaag acaaaggcag
     8461 caagcccaaa tccgaacgca accgccgcga acgcgacagc cgagatgcca aagaacgccg
     8521 cgagcgcaac aatcagcgcg accgccgtca aaacggcaaa aaacgcaata ttccgtctgc
     8581 cgccaaaatc gagcagtacc tgaatattca cgacaccgcc gacaaagtcc gttccgccgc
     8641 cgcgcacgtt ttcggcgaaa ccgacgcaaa cgcgccgatt accgtcagca ttgccgatcc
     8701 ggttgcagaa agggatcttc cgacagcatc tcccgccgtt tcaaacggcg acgcaccggt
     8761 ttatgatgcg gcggaaaaaa tccgccgtgc caccgccgcc atcctgcccg aaggcgcgac
     8821 accgaaagcc gaagcacagg aaatgccgtc tgaaaccgca acctttacgg ctgcggcgga
     8881 acaggcacgg gaaaccgcac aaaccggcgg actcgtcctg atcgaaaccg accctgccgc
     8941 attgaaggca tgggcggcac aacccgaagt ccaaaccgga cgcggtttgc gccgttccga
     9001 acagcccaag ccgtctgaag tcgcaaccgt ccctgccgaa gaaatgatcc aagtcgaaac
     9061 ccggcaaggc tgaaccgacg gcggcaaaaa gaggttctgt tccgcagaac ctctttttta
     9121 catgggttcg gatacctgca atgccgtctg aaacttcgcc attcccgtga ttaccgaaac
     9181 attccgccat tcccatgatt cccgcaacat tccgtcattc ccatgattcc cgcaatcttt
     9241 cgtcattccc gcgaaaacgg gaatctagaa cctcaaactt tcagataatt tttgaatatt
     9301 gccgccgccc aaaggtctgg attcccgcct gcgcgggaat gacggtttag aaattgcccg
     9361 aaatctcaaa aaaaaccgaa accgaacaag ccagattccc gcaacattcc gtcattcccg
     9421 tgaaaacggg aatctagaac ctcaaacttt cagataacct ttgaatattg ccgctgtcca
     9481 atggtctgga ttcccgcctg cgcgggaatg acggtttaga agttgcccga aacctcaaaa
     9541 aaaccgaaac cgaacaagcc ggattcccgc aacattccgt cattcccgtg aaaacgggaa
     9601 tctagaacct ctaaactttc agataatctt tgaatattgc cgctgtccaa aggtctggat
     9661 tcccacaaca ttccgtcatt cccgtgaaaa cgggaatcta gaacctcaaa cttt
//
LOCUS       DAWGBY010000067         9445 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.067, whole genome shotgun sequence.
ACCESSION   DAWGBY010000067 DAWGBY010000000
VERSION     DAWGBY010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.067"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            557..1732
                     /locus_tag="WHG62_001362"
     CDS             557..1732
                     /locus_tag="WHG62_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ1725462.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQANAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(2205..2753)
                     /locus_tag="WHG62_001363"
     CDS             complement(2205..2753)
                     /locus_tag="WHG62_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ1725463.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLPPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(2756..4252)
                     /gene="ccoG"
                     /locus_tag="WHG62_001364"
     CDS             complement(2756..4252)
                     /gene="ccoG"
                     /locus_tag="WHG62_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ1725464.1"
                     /translation="MTTENQAGNPESGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            4779..6758
                     /gene="tkt"
                     /locus_tag="WHG62_001365"
     CDS             4779..6758
                     /gene="tkt"
                     /locus_tag="WHG62_001365"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ1725465.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLDDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQAAVLPESLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            6899..8287
                     /gene="fumC"
                     /locus_tag="WHG62_001366"
     CDS             6899..8287
                     /gene="fumC"
                     /locus_tag="WHG62_001366"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ1725466.1"
                     /translation="MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(8352..9275)
                     /locus_tag="WHG62_001367"
     CDS             complement(8352..9275)
                     /locus_tag="WHG62_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ1725467.1"
                     /translation="MENQRPHLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALIVVGGAVTAAVGDRLFKRR"
BASE COUNT         2390 a         2691 c         2272 g         2092 t
ORIGIN      
        1 ttccaaatcc ccgagattat ccctcgggga ttttttattg tctcggcaac tcgttaccat
       61 atctttacct acccccttca tcagaatctc agacacaatc gaatcatatt caaacctttg
      121 ccgtgcaaac cgatatccca taaccggatg cggtgtccgt ccaacatttt acccgattga
      181 aacgcctgat atattgcacc ccatcaacgt ggcattactt ttcttaacaa tcccctttga
      241 cagcaactga ctagggcttt tttatgccat catcaaattt atagtggatt aactttaaac
      301 cagtacggcg ttgcctcgcc ttgccgtact atttgtactg tctgcggctt cgtcgccttg
      361 tcctgatttt tgttaattca ctataatatt ttctctcccg attgaaacag gcgtaacaga
      421 atatgcccga agctccggct gctttcttgt ttaccgccgc gatatttaga gtataatacc
      481 aaatttgagc aatagttcta aaacagttag aaccattttt catgagcctg actgattcgt
      541 atactcggag aaactgatgc aaaatatttt tgaccctttg gttattcgtg gaaaatccct
      601 tacccccatc gtgcaaggcg gtatgggggt cggtgtttcc gcatcgggtt tatccagcgc
      661 ggtggcacgt gaaaacggta tcggaacgat tgccagtgtg gatttgcgcc accttcacga
      721 agacctactc gccgaatcac aaatcaatcc gagtgaagag aaatatacat ctttgaactg
      781 taccgcatta gacagggaaa tccaaaaagc caaaagcgct tcagagggaa aaggactgat
      841 tgcggtcaac gtgatgaagg cggtcaaaga ccacgccgcg tatgtccgcc aggcttgcga
      901 atcaggggcg gatgcggttg taatgggtgc cggcctgcct ttagacctgc cggaaatgac
      961 cgagggctat cataaagatg tcgcgctgct gccgattctg tccgaatcgc gcggtattaa
     1021 tatcgtcttg aaacgttgga tgaaaaaagg catattgccc gatgcgattg tagtcgaaca
     1081 tcctgcccac gcggccggac atttgggtgc atcaaccgtt gaaggcgtaa acgatgccaa
     1141 gttcgacttc aaacgcgtga ttgaggaaac gtttgaagtt ttcaaaagtt tagggctgga
     1201 aagcgaaaaa atcccgctta ttcttgcggg aggcatggca aattttgaaa aagtcaaaac
     1261 cgccctaaag aactggggag catccgccgt tcaaatcggt acggcttttg ccgttaccga
     1321 agaaggagat gcacacctta acttcaaaaa aacgctcgcc ggtgcggaaa ctgaaaaagt
     1381 agttgaattt atgtctgttg ccggtttgcc ggcgcgcggt gtccgcacca aattcctaga
     1441 cagctacatc aagcgtgaaa gcaaacttca ggcaaacgcc aaagctgacc cgcgccgctg
     1501 tacccaaggt ttaaactgcc tgaccagttg cggcctgcgc gacgggcttt ccaaagccgg
     1561 acaattctgc attgatatcc agcttgccgc cgcattccgt ggagaagtag ataaaggcct
     1621 gttcttcaga ggtaaagacc cgctgccctt cggcaatgcc atccgtaccg tccgcgagac
     1681 gatacaatat ctgctgacag ggagcgaacc tgttgcaacg ctcggacgct gacatcaggt
     1741 aggatttgat ttgcaaacaa aatgccgtct gaagggcttt cagacggcgt tttttaggtt
     1801 gtgttccgga atagtgtcga aaaaacggag agaaataaaa acgttttgat gtgaacaaaa
     1861 tgccttctgc attgtgtcag gcatacaaca taaatgccgt ctgaagccct tcagacggca
     1921 tttttcaggc tgcgttccgg aatagtgtcg aaaaaacgga gagaaataaa aacgttttta
     1981 tgtaaacaaa acgccttctg cattgtgtca ggcatacaac acaaatgccg tctgaagccc
     2041 ttcagacggc atttttcagg ctgcgtttcg gaatggtgtt aaaaaataaa cgggatgagc
     2101 tgcatttatt ttcgtccgac aaatcaaacc atcgcgccga atgattaaat aacgcctgca
     2161 cggcattaca tctggcaaac caatgcaata aaaacacggc ttttttattt gcttccggca
     2221 ttattgaaaa gtttgtccat cggggtcaaa tcgaccgcat tgccttggct ggtaatccat
     2281 ttgttctcga cgcgccacac gcctgccgcg tcctccacgc gcacatacca gtggttggtc
     2341 ggaggaaggg ttttgaacac cgcctcatat tccgccctgc cgttctgcgc gctgccgacg
     2401 ggcttgaggg cgacggtttg atcgtccgcc ttgcgggtcg ggtgcatcag cagcaggttc
     2461 aaaggctgtt tgccgtcaaa ctcgccgccg acaaacactt ttgccgcatt catatcgggg
     2521 gaaatgagaa cctgcacccc gatatgccgt ctgacagcct cttcatcccg atgaagctgg
     2581 atgtcgatat gtttgccgtc tttataataa tcgtccgtaa ccaaatctgt cgcgtgctgc
     2641 tgtgcgacaa aaaacatagc gacgctggcg atgacgacaa aaatcggccc cgccatcaag
     2701 atccacggcc agacgtgttt gtaccaaggt ttgattggag tgttttgaga cacggttatt
     2761 ctccgataaa ggttgcatct tcttccaaga cgaccggctt gccgtcgggc gcgccgcttt
     2821 cgcggtattg gaaggtaaat tcgatagggt ggctgccttt gtccgcgtat tccggaatgg
     2881 tggacacttg gacgggaagg gttaccgttt cgcgcggggc aaccttgata ccgccttcgg
     2941 gcagcccggt cagggcgatt tcgtcaaagc ctttgacact tgcggtaatg agctgttctt
     3001 tttcactttt gttgatgata cgcaggctgt atgcgttttc cagccagcct ttggcgtttt
     3061 cgcgcaccag tacgccacgg tctttcaaaa tatcgacctc gaccattttg cgcgtggaca
     3121 aaccggccag gaaggcaatg ataactaacg ccaacaccgc gccgtaacct gccacgcgcg
     3181 gtctgagcag ccgtttttta atgtcttttt cagaatattc gtgttccagc gcgctttcgg
     3241 tcgtataacg gattaatccg cgcggatagc ccattttgtc cataatctca tcgcacgcgt
     3301 cgatacaggc ggcgcagccg atacattggt attgcagacc gttgcggatg tcgatgccga
     3361 cggggcagac ttggacgcac atcgcacagt tgatgcagtc gcccaaaccc gcctcttcct
     3421 tattgaccgt tttcttgcgc gcgccgcgcg gttcgccgcg ttccgcgtca taagaaacaa
     3481 tcagcgtgtc cttgtcgaac atcgcgcttt ggaaacgtgc atacggacac atatgcaggc
     3541 atactttttc gcgcataatg tgggcgaaga agaaggtcat aaagccgtaa aacgctgtgg
     3601 caaacatcgc gccgccgcct gctgctccag tgaataaatc gggaacgaac tggcggatag
     3661 ggacaaacca gcctgcaaac gtgatgcccg tccacgcgca gacaaggaaa atcagcaggt
     3721 atttggtggc tttgatgcgg attttagtga aattccacgg cgatttttcc agtttcagcc
     3781 gtttgttcct atcgccttcg accaggttgt cgatccacag cataatttcg gtgtaaaccg
     3841 tttgcgggca ggaatagccg caccacagtc gcccggcaat cgtcgtccac caaaacagcc
     3901 cgaaggcgca aatcatcagc agcaaggcaa ggtaaatcaa atcgcccacc cccaacgaca
     3961 atccgaaaat gaagaaatgc cgttcgggga tattgaaaac gacagcctgc ctgccgctcc
     4021 agttgaacca cggaatgacg taaaacacaa actgcgtcgc caatacggcg gcgatacgca
     4081 gtttggcgaa ccgtccttcc gcctttttgg gatggatgcg ttcgccttcg ggatggattt
     4141 gaatcacgct ggctcgcgga tcgaatgttt ttttcgcttt cggcgcggct tttgtttgtt
     4201 cggacgtgcc gattccggat tccggattgc cggcttggtt ttccgtggtc attctgcatt
     4261 ccttagattt ttgattgatg gtttgcccgt taccgccgcc gtttgctttt cagacggcat
     4321 ttttcttgtt ttttaaggcg ttgtgtttca agttttgaga aaatccgttt ttcccaaaat
     4381 atatttccgc tattgtacaa ctttatgcgc cgtccggatg tatggggcgg atacatttcc
     4441 catccgcatc aaaacgcctg gattttacct taccgcccga acaaaatccg aatacggtta
     4501 aaaaaaagac taaaaaaacc gacaccccca tatcggcaga accgacggcg caagctcata
     4561 aacaaacgct atcgacaatc cggcacacaa tctataacat tttatttcaa aaggaataat
     4621 ggcaggcttc gcccgcaaat cgaaaatcct tccccaccgg tcccctgccg ccgccttccc
     4681 ccgcgtccgc ccttttcttg aaagcataag cgaatcgggc gataatcaac gccgtctgac
     4741 catccactta tccgaaacac cagcaaggaa aatacaaaat gtctcaactg gcaaacgcaa
     4801 tccgcttcct ctccgcagat gccgttcaaa aagcaaattc cggccacccc ggcgcgccta
     4861 tgggtatggc ggaaatggcg gaaacattgt ggacgaaatt cctcaatcac aatcccgcca
     4921 accccaaatt ctacaaccgc gaccgcttcg tcctctccaa cggccacgcg tctatgctgt
     4981 tgtacagcct gctgcacctg accggctaca acctaagcat tgaagacttg aaaaacttcc
     5041 gccaactgca cagcaaaacc cccggccatc ccgaatacgg ctacaccgac ggcgtggaaa
     5101 ccacgaccgg cccgttggga caagggattg ccaacgcggt gggtatggca ttggcagaaa
     5161 aaatccttgc cgccgaattt aataaagacg gtttgaacat cgtcgatcat tacacctacg
     5221 tctttatggg cgacggctgt ctgatggaag gcgtatcgca cgaagcctgt tcgctcgccg
     5281 gcaccttggg cttgggcaaa ctgattgttt tgtatgatga caacaatatt tccattgatg
     5341 gtaaagtgga cggctggttt accgaaaaca tcccgcaacg ctttgaaagc tacggctggc
     5401 acgtcgttcc caatgtaaac ggtcatgaca ccgccgccat tcaagccgcc atcgaagccg
     5461 cacgtgccga aaccggcaaa ccgtccatca tctgctgcaa aaccttaatc ggcaaaggca
     5521 gtgccaacaa agaaggcagc cacaaaaccc acggcgcacc tttgggcgcg gacgaaatcg
     5581 aagccacgcg caaacatttg ggctggactt accccgcctt tgaaatcccg caagaaattt
     5641 acgatgcgtg gaatgccaaa gaacaaggcg cgaaactgga agccgactgg aacgaactgt
     5701 tcgcgcaata tcaagccaaa tatcctgccg aagccgcaga atttgtgcgc cgtatggata
     5761 aaaaactgcc ggaaaacttt gacgagtacg ttcagacggc attgaaagaa gtgtgcgcca
     5821 aagccgaaac catcgccacc cgcaaagcca gccaaaacag catcgaaatc ttggcaaaag
     5881 agctgcccga actggtgggc ggctctgccg acctgacccc gtccaacctg accgactggt
     5941 caaacagcgt ttccgttacc cgcgacaaag gcggcaacta catccactac ggcgtgcgcg
     6001 agttcggtat gggcgcgatt atgaacggtt tggtattgca cggcggcgta aaacccttcg
     6061 gcgcgacttt cctgatgttc agcgaatacg agcgcaacgc cctgcgtatg gctgcgttga
     6121 tgaaaatcaa ccctgtattt gtgttcaccc acgattccat cggtttgggc gaagacggcc
     6181 cgacccacca gccgattgag caaaccgcca ccctgcgcct gattccgaat atggacgtat
     6241 ggcggccgtg cgacaccgcc gaatccttgg tcgcttgggc agaagccgtc aaagccgccg
     6301 atcacccgtc ctgcctgatt ttcagccgtc aaaacctgaa attccaagcg cgcagcgaac
     6361 aacaactgga cgacatcaaa cgcggcggct acatcatcag cgaagcccaa ggcaacgccc
     6421 aagccgtcat cattgccacc ggctcagaag tcgagctggc tttggaagcg caaaaagccc
     6481 tcgccgcgca aaacatcgcc gtgcgcgtcg tttccatgcc gtccaccaac gtattcgacc
     6541 gccaagacgc cgcctatcaa gccgccgtcc tgcccgaaag cctgccgcgc atcgccgtag
     6601 aagccggcca cgccgacggc tggtacaaat atgtcggact gaacggcgca gtcgtcggca
     6661 tcaaccgctt cggcgaatcc gcccctgccg atttactctt caaagcattc ggctttaccg
     6721 tggacaatgt ggttgatacg gtgaaatccg tgctgtaacc ccacacctaa acaaatgccg
     6781 tctgaacgct tttcagacgg catttttttg ccctcccgcc ttgatacttc ctcattcctc
     6841 caatctccat tataatattt gcgaatcact cttattcaca tttcaaaagg agaaacgcat
     6901 gagcacccgt accgaacacg acaccatggg caatgtcgaa gtcccgtccg aagcctattg
     6961 gggcgcgcag acccagcgca gccgcaacaa tttcaaaatc ggcggcgaaa ccctgccgca
     7021 gccgctgatt tatgctttgg cgttggtgaa aaaagccgct gccgcgacca atgtttccct
     7081 cggcaggatt aagccggaac aggcggattt gattacgcag gcggcggatg atgtgttgaa
     7141 cggcaggctt gacggacagt ttcctttagt ggtttggcag accggctccg gcacgcagtc
     7201 caatatgaac atgaacgaag tgctggcaaa ccgcgccaac gaaatcgccg gtacgggttt
     7261 ggcggcttat cagcccgtcc atcccaacga ccatgtgaac cacgcgcaat cgaccaacga
     7321 cgcattccca accgctatcc acgttgccgc cgcgattgaa atcaaccgcc acctcatccc
     7381 cgccgtaaaa gccctgcgcg ataccttgga caaaaaagcc caagctttcg cccctatcgt
     7441 caaaatcggc cgcacccact tgcaagacgc gacgccgctg actttgggac aggaattttc
     7501 cggctacgtt tcccagcttg atcacggttt aggccgtctg aacgatgcgc ttaaagactt
     7561 gtatgaactt gctttgggcg gtacggcggt cggcacgggt ttgaacagcc atcccgaata
     7621 cgccgaaaaa gctgctgcta aactcgccga actgtccggc ttgccgtttg tcagcgcgcc
     7681 gaacaaattt gaagccttag gcggacgcga tgccgccgtt gccgcttcgg gcgcactgaa
     7741 aacgctggcg gcaagcctga ataaaatcgc caacgacatc cgctggctgg caagcggccc
     7801 gcgctgcggt ttgggcgaaa tcaaaatccc cgaaaacgag ccgggttcgt ccatcatgcc
     7861 gggcaaagtc aatccaaccc aatgcgaagc gatgaccatg gtgtgctgcc aagtgttcgg
     7921 caacgacgtt accatcggta tggcgggcgc gtcgggcaat ttcgagctga acgtctatat
     7981 gcccgtcatc gcctacaacc tcttgcaatc catccgcctg ttgggcgacg cgtgcaacag
     8041 cttcaacgaa cactgcgccg tcggcattga acccgtaccg gaaaaaatcg actatttcct
     8101 gcaccattcc ctgatgctcg ttaccgcgtt aaaccgcaaa atcggttacg aaaacgccgc
     8161 caaagtcgcc aaaaccgcct acaaaaacaa caaatcgttg cgcgaaaccg ccgttgagtt
     8221 gggcttgctg acgggcgaag aatttgacga actggtcgtt cctgccgata tggttcatcc
     8281 gcgctaatcc ttccctcaaa taaaatgccg tctgaaacct cgttcggacg gcattttccg
     8341 ttgcctgcga actagcggcg tttgaacagc ctgtccccca ccgccgccgt aaccgcaccc
     8401 ccgaccacga tcagtgcgcc aacataaccc aaaccgttca tatccggcgc ggcaaaagta
     8461 tcaggcatca cataatgccc gagcaaagaa aatattacgg taaacacggg gagcaaggtt
     8521 gttaccgcgc tgactttgga agcctcccaa tgtttcaacg cctcgccgaa cgagccgtaa
     8581 ccgattaacg tattcaagca gcaatacgca aaacaaaccc acgccaacgt accgtccaaa
     8641 cttccgatgt gtgccggttc ggcaaacggc aggaacacgg cggcacttgc cgcataaatc
     8701 aacagcagaa tctgttgcgg cccgaattgc gccgacagca gcttttgcgc cacggcataa
     8761 cacacccatg ccatactgcc tgccgcacac agcaacacgc ccttcgcata cgcgcccaaa
     8821 cccgacaact cgccgaattt atcgttaaaa aacataagca aaccggcaag cagcaaaacc
     8881 aagccgattt tctgagcggc agtcatccgg tctttaaaca ccaacacgcc gacaacaatc
     8941 atcgtaaacg gcgaaatctg ccacaaaacc tgcgtcgtgg tcggcgaaat ataatgcagc
     9001 ccttgggcaa tcagcacaaa gtttgccgaa atgcccgcca cgccgagcag cagcagcctg
     9061 aatgagcacc aagaaaaatc ccgccgcttc ggcagccgcc cgcccaatgc cagcaaaaca
     9121 aacaataccg ccgccgccac ggtaaaacgc acccacacca gcgtcggcgc atcgacaaac
     9181 ttcaatacct gccgcacggc aatcggcagc gttccccacg tcatcgccgc caaaagtgcc
     9241 aacgcgaagc ctaggtgcgg cctttggttt tccatcctga ttttcctatt tttaaacaac
     9301 cgtattgccg gacgatgccg gtttgccgca tcgggcaata atggttcaag cgtttggcgt
     9361 ttaattccaa ccctttgatt tcaaacaaac cggctgaagc tcggctattg cttcgcgcta
     9421 tttgaaaaca ccgcctgaat tttaa
//
LOCUS       DAWGBY010000068         9440 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.068, whole genome shotgun sequence.
ACCESSION   DAWGBY010000068 DAWGBY010000000
VERSION     DAWGBY010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.068"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            750..1184
                     /locus_tag="WHG62_001368"
     CDS             750..1184
                     /locus_tag="WHG62_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ1725468.1"
                     /translation="MNFALSVITFTLASFLPVPPAEAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(1233..2576)
                     /locus_tag="WHG62_001369"
     CDS             complement(1233..2576)
                     /locus_tag="WHG62_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ1725469.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERQLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAVCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGAWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(2581..3234)
                     /locus_tag="WHG62_001370"
     CDS             complement(2581..3234)
                     /locus_tag="WHG62_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ1725470.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            3385..3675
                     /gene="gatC"
                     /locus_tag="WHG62_001371"
     CDS             3385..3675
                     /gene="gatC"
                     /locus_tag="WHG62_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ1725471.1"
                     /translation="MALTLADVDKIARLSRLHLTAAEKEKSLQELNDIFAMVEQMQNI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE"
     gene            3738..5183
                     /gene="gatA"
                     /locus_tag="WHG62_001372"
     CDS             3738..5183
                     /gene="gatA"
                     /locus_tag="WHG62_001372"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ1725472.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPIGV
                     QLIGNYFSEAKILGAAHQIQLNSDWHGKRPE"
     gene            5180..6112
                     /locus_tag="WHG62_001373"
     CDS             5180..6112
                     /locus_tag="WHG62_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ1725473.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDNMVAEMKDSLKTEARGISDGIQTEKPPRRTA"
     gene            6155..7585
                     /gene="gatB"
                     /locus_tag="WHG62_001374"
     CDS             6155..7585
                     /gene="gatB"
                     /locus_tag="WHG62_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ1725474.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASAAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINITRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPELR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRVDANVSVRPKGQEEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKAGLELADSPITAPRLAALVGKIADGTLSGKLAKKAF
                     EAMWAEPESTIAEIIEKHGLQQMTDTGAVEAIVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7677..8687
                     /locus_tag="WHG62_001375"
     CDS             7677..8687
                     /locus_tag="WHG62_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ1725475.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMGGHSEQALSEAEKAQGKILMCCTTAQSDISINIPGYKADALPVRTLP
                     ARIENIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRIKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQDSGRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            8717..9235
                     /locus_tag="WHG62_001376"
     CDS             8717..9235
                     /locus_tag="WHG62_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725476.1"
                     /translation="MQKKIILSLKEKIEGIGNNVDHILLATLILKWLHDYPSLEKEFL
                     DHGSNISEFMNIEILDIPNYPIKKSLISFYDLKALKRQIDISMQRNNSYIYQSLQNFL
                     ENLFIIQEPDMECNICHGTYGFDLWKEIETNRLVYCCKTCAFSEYVNGEFRNNENHLT
                     IPTNDDLSLLNT"
BASE COUNT         2510 a         2689 c         2239 g         2002 t
ORIGIN      
        1 ttgaacaaaa tgccgtccga acccttttca aagcgttcag acggcatttc atcaattata
       61 gtggattaac aaaaatcagt acggcgttgc ctcgccttag ctcaaagaga acgattctct
      121 aaggtgctga agcaccaagt gaatcggttc cgtactgttt gtactgtctg cggcttcgtc
      181 gccttgtcct gatttttgtt aatccactat atcgaaacgt atcaatcgtc attcccgcgc
      241 aggcgggaat ccggtttttt gagtttcagt catttctaat acattcccac cacttttcgc
      301 ttccggattc tcgcttttgc gggaatgacg aattaaagat tatcttaagg tcaagggact
      361 ggattcccgc tttcgcggga atgacggcgg cgggttgctg ttttttgttt ataaatttct
      421 gtaactttga atttcagcca tcttcaataa attatagtgg attaacaaaa atcagtacgg
      481 cgttgcctcg ccttagctca aagagaacga ttctctaagg tgctgaagca ccaagtgaat
      541 cggttccgta ctatttgtac tttctgcggc ttcgtcgcct tgtcctgatt tttgttaatc
      601 cactatattt ttgggaatct gttttacccc aatatataaa gcaccatatt aaggcggagt
      661 ttcttcccca ctttgaaccg aacccggaaa agacaccgcc caagccaatc ctgatgctgc
      721 cccggcagcc aaccatcaag gaaaccctaa tgaactttgc tttatccgtc atcacattta
      781 ccctcgcctc tttcctgccc gtcccgcccg ccgaagccgc cgtctttact tggaaggacg
      841 gcggcggcaa cagctattcg gatgtgccga aacagcttca tcccgaccag agccaaatcc
      901 tcaacctgcg gacgcgccaa accaaaccgg cggtcaaacc cgcccaagcc gacgcaggga
      961 agcgcacaga cggcgcggca caggaaaaca atcccgacac tgccgagaaa aaccggcagc
     1021 ttgaggaaga aaagaaaaga attgccgaaa ccgaacggca gaacaaagaa gaaaactgcc
     1081 ggatttcaaa aatgaacctg aaagcggtgg gaaattcaaa tgcaaaaaac aaggatgatt
     1141 tgattcggaa atacaataac gccgtaaaca aatactgccg ttaatcggct ctagcgcaaa
     1201 ccccatgccg tctgaaacgg cacggggttt gtttatttct gccagtaggt tttgacgttg
     1261 acgaactcgt acagcccgaa ttcggacaat tcgcgcccgt aaccggaatc tttgactccg
     1321 ccgaaaggca ggcgcaaatc gctgctggta tggcggttga taaacaccga tcccgcctgt
     1381 attttttcgg caaaccgcca agcgcgttcg gtatcggcgg tataaatgca ggcacctagc
     1441 ccgaacgggg aatcattggc aagggcgatg gcatgttctt cgttttcggc gcgcaaaatc
     1501 agggcggccg gcccgaatac ttcttctctc cagacgcggc aggcaggatt taccctgtct
     1561 aaaaccgtcg cgggataaaa ccagcctcgc ccttgtggga tttttccgcc ggtcaggcat
     1621 accgcgccgt ttgaaacggc atcttcaacc tgcccgtgaa ccctgtcccg caaatcttcg
     1681 cggtgcagcg gtgcaagcgt agtatcggga tgtttggggt cgcccatttt caatttggcg
     1741 cattcggcaa gaaacagcgt gataaaacga tcggctgcgg cttcggttac gatgatgcgt
     1801 ttggcggcgt tgcacgattg ccccgcatcg cggaaacggg aataacaggc ttctgcggcg
     1861 gcgcgttcca aatcggcatc gggcatcacg ataaaggcgt tgctgccgcc gagttccaag
     1921 acggttttct tgaggtttgc gcccgcatgt gccgcaagga tgcgccccgt atgcgtcgag
     1981 ccggtaaacg ccatcgcatc ggtatcttca accgccttga gcgtgcccgc ctcatccaac
     2041 cacgcgcctg ccaaaggaat gccgtctgaa gccaaatcga acagtgcctg actgacgcgc
     2101 gccacgctgg gcgcgggttt gacggcgcac gcgttgcccg cgcaaacggc aggtacggca
     2161 aagcgcaata cctgccagac ggggtagttc caaggcatga cggcaaacac cacacccaaa
     2221 ggctcgaagc gcacctgact caggctcgcc tgcgtcgcga tggttttgtg ggcaagcagt
     2281 tcgggggcga ggcgggcgta atagcgtatc agttcgatag acttgccgat ttccgctcgg
     2341 cattcgtgca ggcagcgtcc gacttcttcg cacaccattt ccgcaaaacg ctctttctcc
     2401 gcctccaaac ggtcggcaaa tttttgcaga cgcgcggcac gttcggttac gcccagttgc
     2461 gcgaacgccc cgccgcgcat tttcaaatcc gccagttgcc gttcaaactc cgcataatct
     2521 tgggcggggc ggcggtaaag cgtttcgccc gtaaatacat tgacactgtg aaacatcgaa
     2581 tcaacctgcc agttgcggga atatcgtttt cagtcccgac acaataatct ccaccgatac
     2641 cgccgccagc atcataccca tgatacggtt taaaatcgtc agccccgtcg cgcccagcag
     2701 gcggctgacc ttcccggcaa cgattaaaat ggcataacaa atcgcactga ccaccaaacc
     2761 ggccacgata atcagcgcga tgtcgctgta cgttttggct gccgaagcgt aaataatcac
     2821 ggtcgaaata ccgcccgggc cgatggtgat cggtatggcg atgggcacga cggcaatcgc
     2881 tccggcattg cgggcggggc gcgcctgccc cgtttccggc tgcgcgccga gattctgctt
     2941 ggcgggattg tcgttgccgt tcatcatcga aatggcgatc agcagcacca aaatcccgcc
     3001 gccgacctga aacgaaccga cgctgatgcc caaaaccttc agcagcgtac cgccgatcag
     3061 cgcaaatacc gcaatcacgg caaacacggc aacggcggcc gtccgcgcga ccttcctgcg
     3121 ctccttcgtg ctgtgcccgt tggtcaggtc aaggtaaagc gacaacgcgc taaacggatt
     3181 aatcagcacc aaaaaagcca caatcagctt gccgatttcc atgcccaatc ccattatttc
     3241 cccctccttc aaacccgtgc ggcaggcatt cgatgctgca aattgccgcc gcaacggatt
     3301 tttccgttat aattaaaaat tcaagcaata cgccccatca tacccgaacg acggtatctt
     3361 taccatcaga caaggatgct tttcatggca ctgacacttg ccgacgtaga caaaatcgcc
     3421 cgactctccc gactgcacct gactgcggca gaaaaagaaa aatcgcttca agaattaaac
     3481 gacattttcg ctatggtcga acagatgcag aacatcaaca cagacggcat cgaaccgatg
     3541 gcgcatccgc acgaggccgc cctgcgcctg cgcgaagacg aagtaaccga aaccgaccgc
     3601 gccgccgaat atcaggcggt tgctccggaa gtacgcaacc gtctgtacat cgtaccgcaa
     3661 gttatcgaag aataatccga atatgcttca gacggcatca gcaataccgc ccgaagccct
     3721 ttaaggatgg aagatttatg acccaataca cattgaaaca ggcaagcgtc ctgttgcagt
     3781 ccaaacagat ttccgccgtc gaactggcaa gcgcatacct tgccgccatc gccgaaaaaa
     3841 atcccgccct caacggctat atcaccatcg accaagataa aacccttgca gaagcccgtg
     3901 ccgccgacga acgtatcgcg cagggcaacg cctccgcgct taccggcgta cccgtcgcct
     3961 acaaggatat tttctgccaa accggctggc gcagcgcgtg cgcttccaaa atgctcgaca
     4021 acttcatctc cccttacacc gccaccgtcg tccaaaacct gctcgacgaa ggcatggtaa
     4081 cgctcggccg caccaatatg gatgagttcg ctatgggttc gaccaatgaa aactcattct
     4141 acggcgcggc caaaaatccg tggaatccgg aacacgtccc cggcggttcg tcaggcggtt
     4201 ccgccgccgt cgttgccgct cgccttgccc ctgccgcgct cggttcggat accggcggct
     4261 ctatccgcca gcctgcatcg cactgcggca ttaccggcat caaacccaca tacggcacgg
     4321 tttcccgctt cggtatggtc gcctacgcct ccagcttcga tcaagccggc ccgatggcgc
     4381 aaactgccga agactgcgcg attctgttaa acgcgatggc aggtttcgac ccgaaagact
     4441 ccaccagcct cgagcgcgaa aaagaagact acacccgcga tttgaaccaa ccgctcaaag
     4501 gtttgaaaat cggcctgccc aaagaatatt tcggcgaagg caacagcgcc gatgttctga
     4561 cggcattgca aaacaccatt gatttgctga aagcccaagg cgcggaattg attgaagttt
     4621 ccctgccgca aaccaagctg tccatccccg cctactacgt cctcgcctcc gcagaagcca
     4681 gcaccaacct ttcacgttac gacggcgtac gttacggaca ccgtgccgcc caattcggcg
     4741 atttggaaga aatgtacggc aaaacccgcg ccgaaggttt tggcagcgaa gtcaaacgcc
     4801 gcatcatgat cggcacttat gtactgtcgc acggctacta cgatgcctac tatctcaaag
     4861 cccaaaaact gcgccgcctc gttgccgatg attttcagac ggcatttgca cggtgcgacc
     4921 tcatcctcgc gccgaccgca cccactgcag ccccaaaaat cggagcggat gcttcgccgg
     4981 ttgaaaccta cttgagcgat atctacacca tcgccgtcaa cctcgccgga ctgcccgcat
     5041 tgaccctgcc cgcaggtttc agcggcggcg gactgcccat cggtgtacag cttatcggca
     5101 actatttctc cgaagccaaa atcctcggtg cggcgcatca aatccaactc aacagcgatt
     5161 ggcacggcaa acgacccgaa tgaagcagaa ccgcaccttt accttccccg attttcgcac
     5221 cgtttacagc tatgcgcctt tatatcggct gcaacattta aaatacacat tgcgaaaatt
     5281 tttcggaaaa aaagaaattt acgccttcga gcagtttgtc aacgcctccc ctatccgtca
     5341 ggggctgttc ctccactgcc cgcaaaatgc ctatccgctg ctgcgcgaat ttgttgacag
     5401 gcgttttaac tgcaaacgcc gtttagatgc gatgacggca gattttctca tggcggaaaa
     5461 actgttcggc acagacattc tgcaccaaat ggaagactac cgcttccatt tggtcttggc
     5521 gcacctttca gacggcatca gcttgtggct caaccgcaac gacaactgcg tcgaagaagg
     5581 cgcgtggtct ttatctttgc gcgacgaagc aggcaaccgg ctgtatatgg cgaccttcgc
     5641 ctttgtcggc acacacctgc tgacagcctc cgtacaaggg ccggcgggtg aagaagccaa
     5701 agacaccgtc cgccgcataa ccaaacaact ccacggcttg cgtccccaac aactgatggt
     5761 aaccgccctg caatatttcg ccgccgtact cggcttggac ggcgcaatgg gcattgcaca
     5821 aaaacatcag gtcaaactgc gctggaaact taaaaagcgc gtcaaaatga attacgacgc
     5881 attctggcag gaatacggcg caagtttgga acgggacggc tactggcatc tcccccaaac
     5941 ccccgcccgc aaagaccttg ccgacatcga aagcaaaaag cgttcgatgt accgcaagcg
     6001 ttatgaaatg ctggacaata tggttgcaga gatgaaggac agtctgaaaa cagaagcacg
     6061 cggcatttca gacggcatcc aaacggaaaa accgccccgc cggacagcct gacgcgaaga
     6121 ctatcgaatt gatattttag agaaagaagc tcttatgacc tgggaaaccg taatcggctt
     6181 ggaaatccac gtccaattga acaccaaatc caaaatcttc agcggcgcat cggccgcatt
     6241 cggcgcagaa cccaacgcgc acgccggcgt agtggaatgc gcgctgccgg gcgttttgcc
     6301 tgtgatgaac cgcgaagtcg ttgaaaaagc catcaaatta ggcttggctt tggatgcgaa
     6361 aatcaaccgg aaaaacgtgt tcgaccgtaa aaactacttc tatcccgact taccaaaagg
     6421 ctatcaaatc agccagttag acttaccgat tgtcgaacac ggcaaattgg aaatcgtagt
     6481 cggcgacgat gtgaaaacca tcaacataac ccgcgcccat atggaagaag acgcaggtaa
     6541 gtccgtgcat gaaggcttga acggcgcgac cggtatcgac ctgaatcgcg ccggcacacc
     6601 tttattggaa gtcgtatccg aaccggaatt gcgctccgcc gccgaagccg ttgcctacgc
     6661 caaagccttg cacagcttgg taacctggct ggacatttgc gacggcaata tggcggaagg
     6721 ttcgttccgc gtcgatgcca acgtatccgt gcgcccgaaa ggtcaagaag agttcggcac
     6781 gcgccgcgag attaaaaacc tcaattcctt ccgtttcttg gagcaggcga ttaattacga
     6841 agcagaagcg caaatcgaga ttttggaaga cggcggcaaa gtacagcagg caaccatgct
     6901 gtttgatccc gaaaaaggcg aaacccgcgt aatgcgcctg aaagaagacg cgcaagacta
     6961 ccgctacttc cccgaccccg atttgctgcc cgtcatcatt tcagacgctc aaatgcaaaa
     7021 agccaaagca gaaatgcccg agttgccgaa agaaatggca gcgcgtttcg tggcggacta
     7081 cggcgtgtcc gaatacgacg cgcgcctgct caccgcaagc cgcgcacagg ccgcctattt
     7141 tgaagaagcc gccaaagaga gcggacaagg caagccgact gccaactgga tgaacggcga
     7201 actcgccgcc gcgctgaaca aagccggcct ggaacttgcc gacagcccga ttaccgcccc
     7261 gcgcctcgct gcgctggtgg gcaaaatcgc cgatggcaca ttaagcggca aactggcgaa
     7321 aaaagccttt gaggccatgt gggcagaacc cgaatccacc attgccgaaa tcattgaaaa
     7381 acacggcttg cagcaaatga ccgataccgg cgcagttgaa gccattgtgg acgaagtgct
     7441 ggcaaacaac gccaaagccg tggaacaatt caaatccggc aacgaaaaag ccctgaatgc
     7501 gattgtgggg caagtgatga aggccagcaa aggcaaagcc aatcccgcgc aggttcaaga
     7561 actgattaaa gccaaacttg cctgacaagc aagatgccgt ctgaaaccca gatccgacgt
     7621 tcagacggca ttttcacagt ctgaccacat taaaacagca taaaaaacaa tattccatga
     7681 accacaccgt taccctgccc gaccaaacca cctttgccgc caacgacggc gaaaccgttt
     7741 tggccgctgc cgcccgtcaa aacctcaatc tgccccattc ctgcaaaagc ggcgtatgcg
     7801 ggcaatgcaa agccgaactg gtcagcggcg atattcaaat gggcggacac tcggaacagg
     7861 ctttatccga agcagaaaaa gcgcaaggca agattttgat gtgctgcacc actgcgcaaa
     7921 gcgatatcag catcaacatc cccggctaca aagccgatgc cctacccgtc cgcactctgc
     7981 ccgcacgcat cgaaaatatt attttcaaac acgatgtcgc cctcctgaaa cttgccctgc
     8041 ccaaagcccc gccgtttgcc ttctacgctg ggcaatacat tgatttactg ctgccgggca
     8101 acgtcagccg cagctactcc atcgccaatc cgcccgacca agaaggcatt ttggaactgc
     8161 acatccgcag gcgcgaaaac ggtgtctgtt cggaaatgat tttcggcagc gaacccaaag
     8221 tcaaagaaaa aggcatcgtc cgcattaaag gcccgctcgg ttcgtttacc ttgcaggaag
     8281 acagcggcaa acccgttatc ctgctggcaa ccggcacagg ctacgccccc atccgcagca
     8341 tcctgctcga ccttatccgc caagacagcg gccgcgccgt ccatttctac tggggcgcgc
     8401 gtcatcaaga tgatttgtat gccctcgaag aagcacaagg gttggcatgc cgtctgaaaa
     8461 acgcctgctt cacccccgta ttgtcccgcc ccggagaggg ctggcaggga agaaaaggtc
     8521 acgtacaaga catcgcggca caagaccatc ccgacctgtc ggaatacgaa gtatttgcct
     8581 gcggctctcc ggctatgacc gaacaagcaa agaatctgtt tgtgcaacag cataagctgc
     8641 cggaaaactt gtttttctcc gacgcattca cgccgtccgc atcataattc cccggtatag
     8701 taaaagggca gtaattatgc aaaaaaaaat aatactttct ttaaaagaaa aaatagaggg
     8761 tataggtaat aatgtagatc atatcttact cgcaacttta attcttaaat ggttacatga
     8821 ttaccctagt ttagagaaag aatttttaga tcacggttca aatatttctg aatttatgaa
     8881 tatagaaatt ttagatatcc ctaattatcc aataaaaaaa tcactaatta gtttttacga
     8941 tttaaaagct cttaaacggc aaatagatat ttccatgcaa agaaataatt catatattta
     9001 tcaatcgcta caaaattttt tagagaattt atttattatt caagaaccag atatggaatg
     9061 taatatttgc catggcacct atggttttga tttatggaag gaaatcgaga ctaatagatt
     9121 agtttattgc tgcaaaacat gtgcattctc agaatatgtt aatggggaat ttagaaataa
     9181 tgaaaatcac cttaccattc caacaaatga tgatttgagt ttattgaata cataattaat
     9241 agaataagtt atagaaaacc atgtttacat ttttcatcat gagaagctta tgactaatag
     9301 aaaaatatta ttaataatat cttgcctatt gattgctagc tgcagttttg ttgaaactat
     9361 tttttatatg gctattagcc cagaacctgt tgtggtagac tttcctcttg gtaaaaaaac
     9421 aaaaagatct attgaactca
//
LOCUS       DAWGBY010000069         9415 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.069, whole genome shotgun sequence.
ACCESSION   DAWGBY010000069 DAWGBY010000000
VERSION     DAWGBY010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9415
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.069"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(121..1563)
                     /gene="aldA"
                     /locus_tag="WHG62_001377"
     CDS             complement(121..1563)
                     /gene="aldA"
                     /locus_tag="WHG62_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ1725477.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1598..1798)
                     /locus_tag="WHG62_001378"
     CDS             complement(1598..1798)
                     /locus_tag="WHG62_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725478.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTGANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTVIYLGIN"
     gene            complement(1807..2196)
                     /locus_tag="WHG62_001379"
     CDS             complement(1807..2196)
                     /locus_tag="WHG62_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725479.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTVDRISVSFIREIQAA"
     gene            complement(2404..3321)
                     /locus_tag="WHG62_001380"
                     /pseudo
     CDS             complement(2404..3321)
                     /locus_tag="WHG62_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            3494..4294
                     /locus_tag="WHG62_001381"
     CDS             3494..4294
                     /locus_tag="WHG62_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725480.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4343..5119
                     /gene="mlaE"
                     /locus_tag="WHG62_001382"
     CDS             4343..5119
                     /gene="mlaE"
                     /locus_tag="WHG62_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ1725481.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5170..5664
                     /gene="mlaD"
                     /locus_tag="WHG62_001383"
     CDS             5170..5664
                     /gene="mlaD"
                     /locus_tag="WHG62_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ1725482.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVGFLAFCVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5701..6291
                     /locus_tag="WHG62_001384"
     CDS             5701..6291
                     /locus_tag="WHG62_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ1725483.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKN
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGGK"
     gene            6342..6620
                     /locus_tag="WHG62_001385"
     CDS             6342..6620
                     /locus_tag="WHG62_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ1725484.1"
                     /translation="MHTELKNGILHIGGDITVKTLTAAAFTRFRQQCRLKDTCAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6617..7444
                     /locus_tag="WHG62_001386"
     CDS             6617..7444
                     /locus_tag="WHG62_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ1725485.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7569..7931
                     /locus_tag="WHG62_001387"
     CDS             7569..7931
                     /locus_tag="WHG62_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ1725486.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7928..8314
                     /locus_tag="WHG62_001388"
     CDS             7928..8314
                     /locus_tag="WHG62_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ1725487.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            8311..8799
                     /locus_tag="WHG62_001389"
     CDS             8311..8799
                     /locus_tag="WHG62_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ1725488.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8881..9048)
                     /locus_tag="WHG62_001390"
     CDS             complement(8881..9048)
                     /locus_tag="WHG62_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ1725489.1"
                     /translation="MEDDVWPGHRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(9015..9395)
                     /locus_tag="WHG62_001391"
     CDS             complement(9015..9395)
                     /locus_tag="WHG62_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ1725490.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
BASE COUNT         2159 a         2630 c         2387 g         2239 t
ORIGIN      
        1 ctatacaaag acaaaaacat cgatgtcggt catgactgat tgccggtgaa actgtaaaaa
       61 tgccgtctga acctgaaaac gggttcagac ggcattttct atcggggttt taaagcggca
      121 ttaaatgtcg gtttccagat aaacgacttg ggtttgcaga tattcttcca aaccgtgttt
      181 gccgtccgcg ccgccgatgc cggatttttt ccagcccgcg tggaaaccct gcatggcttc
      241 gaagttttcg cggttgatgt aggtttcgcc gaattgcagg cggcgggtaa cgtagaaggc
      301 ttcgtttaaa ttagtcgtat aaacagaact ggtcagacca aactcgcaat cgttagccag
      361 tgcgatgact tggtcgagcg tgtcgaaagc ggaaacgggc agcacggggc cgaaggtttc
      421 ttctttcata atgtccatac tgttgtcggt gtcggtcagc agggtcggct cgaagaaata
      481 gccgcgccct tcggcgcgtt tgccgccgca gaccagtttc gcaccttgtt tgactgcccg
      541 ttccactttt tcggcaacgg ctttgacggc gcgctcttca atcagcggac ccatttccag
      601 cgcgcctgct tcggcttcgg cagggttgcc gtagcgcacg cctttcatgg cggcggtcat
      661 tttttcaatg aacgcgtctt tcaggctgct gtggacatag acgcgctcgg cgcagttgca
      721 gatttgaccg gtgttgccga cgcgcgaagc caagatggat ttcaccgcca aatccaaatc
      781 cgcgtctttc aaaacgatgg cgggggcttt gccgccgagt tccagcgaaa ctttggtgat
      841 gttggcggaa gcggcttcca tcacttggcg gcctgcttcg acggagccgg tcaggctgac
      901 catatcgact tgcggatggg cagacaaggc attgccgatt tccgcacccg gaccgttcac
      961 cacgttgaac acgcctgcgg gcaatccgac cgcatcgacg atttcggcga agatgtggca
     1021 gttgatcggg gttacgctgc tgggtttgac gacgatggtg ttgcccgtta ccaaagcggg
     1081 acccattttg cgggcaatca ggaagaaggg gaagttccac ggcaaaatgc cggcaatcac
     1141 gcccagcgga cgtttgaaca ataaaatatt ttcgcgcggg cggtcgcttt ggatgatttc
     1201 accttcgtaa cggcgcgccc attcggcttg gtaatcgaga tagtcggcgg tgaacatcac
     1261 ttccacgcgc gccaagtctt tggttttgcc gccttcggca acgatggtgt cggtcagctc
     1321 gtcggcgcgt tcgcgtatgc cttgggcgat tttgcgcaaa tatgcgccgc gttcgaccgc
     1381 aggcagccgc tcccatgccg gttgcgccgc gcgtgccgcc gctacggcgc ggtcaacgtc
     1441 cgccttgccg cctttgggtt cacgggcgat ggtttcttcg gtggatgggt tcaatacgtc
     1501 gcgccattcg ccgttgaagt cgttttcaaa gcgaccgttg atgtacatgg ccaattgttt
     1561 catttcgggt tctccagttt tgtagtcaga tgtagtttta gtttattccc aaataaatta
     1621 ccgtacaagt ttcttttgaa atgtttagac gagaagctac tatgtctgca tattgttctg
     1681 ctaatttata ttcactcgaa tgcaactgcc gattattcca atctgcattc gcaccagtaa
     1741 aagccccagc attgccgcct gtggcataac caatcgctaa actgccaacg gtatccacaa
     1801 caggtttcag gctgcctgaa tttctctaat aaatgaaaca cttattctat caaccgttaa
     1861 tgtaaccaaa caattatcaa gataagagta gtttattaaa tactcatctt cttcaaattg
     1921 tatattttgt agggttagat gattattttt taattctgcc gttatttcat acttgaaact
     1981 atcatctatt tttctaaatc caatatttga agttgattta tccagtatgt aatcattaaa
     2041 gatttcatag gataattcca cttcataaaa ttgattttca aatattttga atgggcagta
     2101 cgatataaaa caatgtagtt cataaccatt tatttcaatc aatactgcct cttcaatggt
     2161 gttatctaac tttttgattt tacatttata taacatttat cttgcctttg gataaattgt
     2221 tttgtttttt ggattgttat tcaaagttct ccaaaagtct tttcctgatt ttgtatgtat
     2281 cgtggtaata ctaccatttt cattggttcc aacaaaaata aatttagatt gacctttgga
     2341 atcagtaccc aaaaactgaa catatccaga cacgcggatt tcgggtttta aatcaaatgc
     2401 ggcttaccgg ttttcttttt tggtttccgc aggcgtgctg ccgaaatatt gcctgaatgc
     2461 ctgagtaaag ctggaaacgt ggcggtagcc gcataaatat gcggtttcgc ctatgctttt
     2521 gcccccgttt tgcaacagat aaagcgcgtg ctgcatttgt ttgtggtgca gccactcgct
     2581 tgtggtaatg ccgaaatggt cgcgcatacg gcgttgcagc gtcctttcgc tgatgttcag
     2641 cgcgtctgtc agccggttga cttggtgtgc gccgccggca aacgcggcat tcagggtgcg
     2701 gctgaagtct tcagacggca tagcgtctgc tcccgccgtt tgccccgccg ccggcccgat
     2761 gccgtctgaa accgtgtccc acaagtccga cagcagccgc aacacgtccg cctcgcggcg
     2821 caatgtttcg cccaaatgcc cctttgggac agctttcagg caggatgccg ccaagccgcg
     2881 caggttcggg ggcaaatcct atatcctgac cggttcgcgg taaagcaggg gtgcgaaacg
     2941 cgcgtattcc ggacgcagca gccattgttc cataccttta atggtcattt tgaccgtttt
     3001 gccgcctcgg taaagatagc ggctgaacag gacttcttcc ccgacagcaa ttaggacaat
     3061 cttgccgccg tccgcatcga tttggaagcg gcagcggttg atgccgaagt ccaaactgcc
     3121 ttccagcaag agcacgaacg acacataagg ttcggcgagg cggctgctgc aaaaatcaca
     3181 ccgtgccgtt actgtgccgc cgtggatgga aatgccgttg gacaaagtat cgaaacggta
     3241 gctgccctcc acatagctgc cgccgccgct tttgaccaga ttgacgaacc ggctgctgtt
     3301 caaatgttct gctttttcca tagttttctg ataaaggtta tcatttgaaa gataacattt
     3361 ttcgccacag caaacaatcc gccgccgaca acggcatttt cacaacattt accgtccgta
     3421 tgccgtctga aaattgcccg tcttcccgat aagccttaaa atacacgccg tcaaacctac
     3481 cgtccgtccg tacatgagcc catccccctt tatcgaaatg aaagacgtcg ccttcgcgta
     3541 tggcgaccgc ccgattctga agaacatcaa tttcagcatt ccgcaaggca attttgctgc
     3601 cgtaatgggc ggttcgggca gcggcaaaac cacgctgatg cgactgatta caggacagat
     3661 tcgtccgcag tccgggcagg ttttgattga aggacgggat ttggcgggct tttcggctga
     3721 cgagttgtat gaacaccgcc gccgtatggg cgtattgttc caacacggcg cgctgtttac
     3781 tgatttgtcg gtattcgaca atatcgcttt tccgatgcgc gaactgacgc gcctgccgga
     3841 agcggtgatt cgggatttgg ttttgttgaa attgaacgcg gtcggtctgc gcggtgtgga
     3901 aaacctgatg ccgtccgagt tgtccggcgg gatgtcgcgc cgcgtcgcgc ttgcccgcac
     3961 gattgcgctc gaccctgaaa ttatgttgta cgacgagccg tttaccggcc tcgatccgat
     4021 ttccttgggc gtgattgccc acttgatcag ccgcgtcaac aaggctttgc gttcgaccag
     4081 tattatggta acgcacgaca ttgaaaaatc tttggaaatc gtcgatcagg tgattttctt
     4141 ggcgcacggc gaaattatgt tttccggctc gccgcaggaa atgcgcgaac tggattcgcc
     4201 ttgggtgcgc cagtttgtcg gcgggctggc agacggcccc gtagcatacc gttatccggc
     4261 gcaaacgtcg ttgcagcagg atttgctcgg gtaaattgag ccggtgccgt ctgaaaccgt
     4321 tgaactttac atatagaaat ttatgaattt tatccgttcc gtcggggcga aaaccctcgg
     4381 ccttattcaa tccctcggca gtattacgct gtttctgctg aacattctgg cgaagtccgg
     4441 tacggctttc gtccgtccgc gcctgagcgt gcgccaagtg tattttgccg gcgtgctgtc
     4501 ggtgctgatt gttgccgttt cggggctgtt tgtcggcatg gttttgggtt tgcagggcta
     4561 tacgcagttg tcgaaattca aatccgccga tattttgggc tatatggttg cggcttcgct
     4621 gttgcgcgaa ctgggtccgg tgttggcggc gattctgttt gccagcagcg ctggcggtgc
     4681 gatgaccagc gaaatcggtt tgatgaaaac gaccgaacag ctcgaagcga tgaacgtgat
     4741 ggcggtaaac cctgtcgccc gcgtggttgc gccgcgcttt tgggcgggcg tgttttccat
     4801 gccgcttttg gcttcgattt tcaacgtggc gggtattttc ggcgcgtatt tggtcggtgt
     4861 aagctggctg ggcttggaca gcggcatttt ctggtcgcaa atgcagaaca acatcacgat
     4921 acattacgat gtaatcaacg gtctgatcaa atccgccgcg ttcggcgtgg cggtaacgct
     4981 gattgccgtg catcagggct tccactgcgt cccgacctcg gaaggcattt tgcgcgccag
     5041 cacgcgcacg gtggtttcgt ccgccctgac gattttggcg gtcgatttta tattgaccgc
     5101 gtggatgttt acagattgac agggcgtctg aagacgaaac gcggaacatc ggatattcaa
     5161 ggaactttaa tgaaaaagaa catattggaa ttttgggtcg gactgttcgt cctgattggc
     5221 gcggcggcgg tcggctttct cgctttctgc gtggcgggcg gtgcggcgtt cggcggttcg
     5281 gacaaaactt acgccgttta tgccgatttc ggcgacatcg gcggtttgaa ggtcaatgcc
     5341 cccgtcaaat ccgcaggcgt attggtcggg cgcgtcggcg ctattggact tgacccgaaa
     5401 tcctatcagg cgagggtgcg cctcgatttg gacggcaagt atcagttcag cagcgacgtt
     5461 tccgcgcaaa tcctgacttc gggacttttg ggcgagcagt acatcgggct gcagcagggc
     5521 ggcgacacgg aaaaccttgc tgccggcgac accatctccg taaccagttc tgcaatggtt
     5581 ctggaaaacc ttatcggcaa attcatgacg agttttgccg agaaaaatgc cgacggcggc
     5641 aatgcggaaa aagccgccga ataaacgtat gccatcatat tcaaactagg acacttaatc
     5701 atgaaaaaat cctccctcat cagcgcattg ggcatcggta ttttgagcat cggcatggca
     5761 tttgccgccc ctgccgacgc ggtaagccaa atccgtcaaa acgccactca agtattgagc
     5821 atcttaaaaa acggcgatgc caacaccgcc cgccaaaaag ccgaagccta tgcgattccc
     5881 tatttcgatt tccaacgtat gaccgcattg gcggtcggca acccttggcg caccgcgtcc
     5941 gacgcgcaaa aacaagcgtt ggccaaagaa tttcaaaccc tgctgatccg cacctattcc
     6001 ggcacgatgc tgaaattaaa aaacgccaac gtcaacgtca aagacaatcc catcgtcaat
     6061 aaaggcggca aagaaatcat cgtccgcgcc gaagtcggcg tacccgggca aaaacccgtc
     6121 aacatggact tcaccaccta ccaaagcggc ggtaaatacc gtacctacaa cgtcgccatc
     6181 gaaggcgcga gcctggttac cgtgtaccgc aaccaattcg gcgaaattat caaagcgaaa
     6241 ggcgtggacg gactgattgc cgagttgaaa gccaaaaacg gcggcaaata accgacaaac
     6301 cataccgtcc gagggcggta tgggttttcc gagcaaacgc tatgcataca gaactcaaaa
     6361 acggaatatt gcacatcggc ggcgacatca ccgtcaaaac cctgaccgcc gccgctttta
     6421 cccgcttcag acagcaatgt cgtctgaaag acacctgcgc ggttgatttg agcggcgtcg
     6481 gacgcgccga ttccgcctgc gtgtcgctgc tgctcgaagt gctgcgcggt tgcaaaggca
     6541 gcgtcaggct gaccggcatt cccgaatccg tgcgcgcgct gtccgaactg tacgaaatca
     6601 aagactggct gaaatcatga aaaaaaccgc ctatgccttc ctcctgctga tcgggttcgc
     6661 ttccgcccct gcatttgccg aaacccgccc cgccgaccct tatgaaggct acaaccgcgc
     6721 cgttttcaaa ttcaacgacc aagccgaccg ctacattttc gcccctgccg cgcgcggcta
     6781 ccgcaaagtt gcgccgaaac ccgtccgcgc cggcgtgtcc aattttttta acaacctgtg
     6841 cgacgtggtc agcttcggta gcaatatctt gcgcttggac atcaaacgcg caagcgaaga
     6901 ccttgtccgc gtcggcatca acaccacttt cggtttgggc gggcttatcg acatcgccgg
     6961 cgcgggcggc attcccgaca ataaaaacac cttgggcgac acgtttgctt cgtggggatg
     7021 gaaaaacagc aattatttcg tgttgcccgt cttagggccg tccaccgtcc gcgacgcgct
     7081 cggcacgggt attacctccg tttattcgcc caagaatatc gtcttccgca cccctgtcgg
     7141 acgctggggc acgactgccg tatccgccgt cagtacgcgc gaaggtctgc tcgatttgac
     7201 cgacagtctg gacgaagccg ccatcgacaa atacagctac acgcgcgacc tctatatgaa
     7261 agtccgtgcg cggcagaccg gtgcaacacc tgccgaaggt acggaagata acatcgacat
     7321 cgacgaattg gtcgaaagtg ccgaaaccgg cgcggcggaa actgccgttc aagaagattc
     7381 cgtatccgaa acacaggcag aagcagcagg ggaagccgaa acgcaacctg gaacacaacc
     7441 ttaaagccat gccgtctgaa aatccgtgtt cggacgacat tcccttctgt cggaacggac
     7501 agtccgaaac cacagattgg gctataatct cttttttgcg cataccgcgc gacagcaaag
     7561 gaaaaaccat gtacgaagtc aaccgcagcg tattcgtcct catcccttta gaaccttttt
     7621 ggaactggct gcaaaccctg ccgggcaacc acctcgacgg actgactctt gaagacatcc
     7681 aagccgacgc caattcctac cttgtccgcc cgtgcgaaac cgccgacgaa gtatgggacg
     7741 aaatcgaagc ccgttttgaa gacattttcg ccgccgaact tgccgactgg tgcgaagacg
     7801 aacgcgagtg gcctgcgctc gatgccgaca ttttcaacga atggttcgac atccagcttt
     7861 ctaccgtcat caccgacctc gaacacgaac cgcttgcccg cgaagccttc caacccatca
     7921 acctgaactg atgaagctga ccgtccgcaa ctaccatctc gacggctacg gccatgtcaa
     7981 caatgcgcgc tacctcgaat ttttcgaaga agcgcgctgg gcgttttttg aagaacgcgg
     8041 actgctgcac gagttggcag gcctcatact gattgtcgcc cgcatcgaca tccgatacag
     8101 ccgccccgcc gtcgaaggcg acgtattgca gttttcatgc cgcctgaaaa cccccggcac
     8161 gcgccgtatt gtgctgaccc agacgattac actgccaaac ggcaaaaccg ccgcagaagc
     8221 cgacatcacc ctgatgcccg tccacgccgc cacacaacgc accgtcagcc tgcccgccac
     8281 ccttgcccgc gcattggaag ccttgtccga atgaaaaaaa tactcaccgc cgccgtcgtc
     8341 gcactgatcg gcatcctcct tgccatcgtc ctcatccccg acagcaaaac cgcgcccgcc
     8401 ttctccctgc ccgacctgca cggaaaaacc gtttccaacg ccgacctgca aggcaaagta
     8461 accctgatta atttttggtt tccctcctgt ccgggttgtg tgagcgaaat gcccaaaatc
     8521 attaaaacgg caaatgacta taaaaacaaa aacttccaag tccttgccgt cgcccagccc
     8581 atcgatccga tagaaagcgt ccgccaatat gtcaaagact acggtttgcc gtttaccgtc
     8641 atgtatgatg cggacaaagc tgtcggacag gcgttcggca cacaggttta tccgacttcc
     8701 gtccttatcg gcaaaaaagg cgaaatcctc aaaacttatg tcggcgaacc cgatttcggc
     8761 aaactctacc aagaaatcga taccgcgctg gcacaatagc gatgccgtct gaagcgcaaa
     8821 aaaacagaaa cgatgttcct gttttttcag atcatccgcc ccgacacgtt cagacggcat
     8881 tcaaccttcc ggcagattct ttttcaccac tgccggattg cctgccgcca aagagtaggg
     8941 cggaatgtct tttgtaacca ccgcgcctgc gcccacgacc gaaccgcgtc cgacggttac
     9001 gcccgccatt acaatcaccc tgtgccccgg ccagacatcg tcctccaacg taatcggacg
     9061 gatttccgtg tagccctcaa agcgtttttt gaacggtcaa acttgtggtt atttgaataa
     9121 aacagacatt ccggctccat catcacattt ttgccgacca ccagcccacg gcagatttca
     9181 cagtttgccc cgatgcccga gccgtcgccc aaaaccgtat ccggaaacac atacgccccg
     9241 cgttcgatat tgaccccgcg tccgatatgc ggagaaaccc gccgcgccaa aaaaccgcgc
     9301 acccgtctgc cgacgatgcc gatgccgcgc atatgtgacg gcggcaaccc cgaaccggca
     9361 aaacgcagca gcaggaaaaa gaattttgat cccatcaaac ctccctcaaa agaac
//
LOCUS       DAWGBY010000070         9398 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.070, whole genome shotgun sequence.
ACCESSION   DAWGBY010000070 DAWGBY010000000
VERSION     DAWGBY010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9398
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.070"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            179..958
                     /gene="pgeF"
                     /locus_tag="WHG62_001392"
     CDS             179..958
                     /gene="pgeF"
                     /locus_tag="WHG62_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ1725491.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVDDNPEAVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALGGTPDADAS
                     VDDTGKAACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            1010..1489
                     /locus_tag="WHG62_001393"
     CDS             1010..1489
                     /locus_tag="WHG62_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725492.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALR
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1491..2489
                     /locus_tag="WHG62_001394"
     CDS             1491..2489
                     /locus_tag="WHG62_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ1725493.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHTVNIDEAQTAVANVARFDVFQLAGA
                     WMKGDVPRVCRLLDGLQEEGEEPVLLLWAVAEDVRTLIRLAAVLKQGQGVQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            2610..3029
                     /locus_tag="WHG62_001395"
     CDS             2610..3029
                     /locus_tag="WHG62_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725494.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            3105..3620
                     /locus_tag="WHG62_001396"
     CDS             3105..3620
                     /locus_tag="WHG62_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ1725495.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLYLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3704..4588)
                     /locus_tag="WHG62_001397"
     CDS             complement(3704..4588)
                     /locus_tag="WHG62_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ1725496.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDTENSRQSLELNSDLVNQLAEINKNLR
                     KHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLVEAVGDINNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            4867..5013
                     /locus_tag="WHG62_001398"
     CDS             4867..5013
                     /locus_tag="WHG62_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725497.1"
                     /translation="MLIHYINSANLSEKQLMRQCLVHVCFLISAIAMVWTDKIVYGTT
                     HKPH"
     gene            complement(5072..5935)
                     /gene="rpoH"
                     /locus_tag="WHG62_001399"
     CDS             complement(5072..5935)
                     /gene="rpoH"
                     /locus_tag="WHG62_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ1725498.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(6199..7737)
                     /gene="lnt"
                     /locus_tag="WHG62_001400"
     CDS             complement(6199..7737)
                     /gene="lnt"
                     /locus_tag="WHG62_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ1725499.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFTRERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            complement(7806..8174)
                     /locus_tag="WHG62_001401"
     CDS             complement(7806..8174)
                     /locus_tag="WHG62_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ1725500.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDDLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLIGGVLVAHNLGLLHDFLHTQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            complement(8074..8532)
                     /locus_tag="WHG62_001402"
                     /pseudo
     CDS             complement(8074..8532)
                     /locus_tag="WHG62_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            8728..9009
                     /locus_tag="WHG62_001403"
     CDS             8728..9009
                     /locus_tag="WHG62_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725501.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLPARLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYISWLGLAEPCRFRR"
     gene            9009..>9398
                     /locus_tag="WHG62_001404"
     CDS             9009..>9398
                     /locus_tag="WHG62_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HEZ1725502.1"
                     /translation="MMPPVTGVPNSHLLFDVAFAVVVLSLLIRGMTIPVMARLLKVAM
                     PNKPEPKDTHDIWLAKKEIVRMSAFKVVAESEAEGHHPDTVEPISDSFGARCFALIRN
                     GIRIEMQSDTVLQAGIWRGTSCPTARSI"
BASE COUNT         2052 a         2326 c         2765 g         2255 t
ORIGIN      
        1 taatccacta tatataaggg catcattccc gcaccggcaa gaatccaaac ccgaacgttt
       61 gaaaacaatc ccgaatctcc gaattcccgc ctgtgcggga atgacgaaaa aacaaacatc
      121 catttgcccc gaaggcagtt aatcaaccct ttccgccaca cacctattcc aatatccaat
      181 gaaaaccatc acagaaaccc taaatctcgc cccgaaaggc aaaaacttcc tgaccgccga
      241 ttggcccgcg cccgccaatg tgaaaaccct gattaccacg cgcaacggcg gcgtgagcca
      301 aggtgcgtat cagagtttga acctcggtac gcacgtcgac gacaatcccg aagccgtgcg
      361 ccgcaaccgc gaaatcgtgc aacagcaggt cggattgccc gttgcctacc tcaatcaaat
      421 ccacagcacc atcgtcgtca acgctgccga agcgttaggc ggcacgcccg atgccgacgc
      481 ttccgtggac gacacgggca aggccgcctg tgccgtgatg accgcagact gtctgcccgt
      541 tctattttgc gacagggcgg gtacggcggt tgccgccgca cacgcgggct ggcgcggttt
      601 ggcgggcggc gtattgcaaa acaccattgc tgcgatgaag gttccgcctg tcgaaatgat
      661 ggcgtatctc ggccccgcca tcagtgcgga tgcgtttgaa gtcggacagg atgtgtttga
      721 tgcgttctgc acgcccatgc ccgaagccgc cgccgcattt gaaggcatag gcggcggcaa
      781 attccttgcc gacctttacg cgctcgcccg cctgattctg aagcgcgaag gcgtgggcgg
      841 cgtatacggc ggcacgcatt gtacggtttt ggaacgggat actttctttt cctaccgccg
      901 cgacggagcg acagggcgta tggcgagcct gatttggctg gacggcaatg ccgtctgaac
      961 acgccgctga tataatctac cgactttgtg cttttgagaa aggcaagcca tgaacaaact
     1021 gtttcttact gccgcagtgc tgatgctggg cgcgtgcggt ttccacctga aaggtgcaga
     1081 cggcatttct ccgccgctga cctaccggag ctggcacatc gaaggcggac aggcattgcg
     1141 gtttcctttg gaaacagcgc tgtatcaggc ttcgggcagg gtggacgatg ctgccggcgc
     1201 gcagatgacc ctgcgtatag acagcgtttc ccaaaacaag gaaacctaca ccgttacccg
     1261 tgcggcagtc atcaacgaat atcttttgat attgacggtt gaagcgcagg tattgaaacg
     1321 cggcgagccg gtcggcaaac cgatgaccgt gtccgtccgc cgcgtccttg cttatgccga
     1381 caacgagatc ttgggcaaac aggaagagga agcggcattg tgggcggaaa tgcggcagga
     1441 tgccgccgaa cagattgtcc gccgcctgac ctttctgaag gcggaatgac gtggcggcac
     1501 atatcggacg cattgatacg gacgcgcctt tgaaacccct gtacgtcatc cacggcgagg
     1561 aagaactgtt gcgtatcgag gcattggacg cattgagggc ggcggcgaag aaacaaggtt
     1621 accttaatcg ggaagtttat acggcagaca atgctttcga ttggaacgag ctgctgcaaa
     1681 ccgcaggcag tgcgggtctg tttgccgatt tgaagctgtt ggaactgcat atccctaacg
     1741 gcaagcccgg caaaaccggc ggcgaggcgt tgcaggattt tgccgcccgc ctgccggaag
     1801 atacggtaac gctggtttta ctgcccaaac tggagaaaac ccagctccag tccaaatggt
     1861 ttgccgcatt ggcggcaaag ggggaagtgt gggaagccaa accggtcggc gcggcggctt
     1921 tgccccaatg gatacgcgga cggctggaca aaatcggttt gggtatcggg gcagacgcat
     1981 tggcactgtt tgccgagcgc gtggaaggca atctgttggc ggcacgtcag gaaatcgaca
     2041 agctcgcgct gctgtatccg aaagggcata ccgtcaatat cgatgaggcg caaaccgccg
     2101 ttgccaatgt tgcccgcttt gacgtttttc agcttgccgg cgcatggatg aagggcgatg
     2161 tcccgcgcgt atgcaggttg ttggacggat tgcaggagga aggcgaagaa ccggtgctgt
     2221 tgctgtgggc ggttgccgaa gacgtgcgga cgctgattcg gcttgccgct gtcctgaaac
     2281 aggggcaggg tgtccaatcc gtacgcaaca gtctcagact ttggggcgac aagcagacgc
     2341 tcgcgccgct tgcggtcaag cggatttccg tcgtccgcct gcttgacgcg ctcaaaacct
     2401 gcgcccaaat cgaccgaatc atcaaaggcg cggaagacgg cgacgcatgg acggtattca
     2461 aacggcttgt cgtgtcgctg gcggaataaa gcggtaatcc ccaaaatccg aaaatactgt
     2521 aaaataccgt taatcctgaa aagtattcac caatccgtcc gaaaacattt cagacggcac
     2581 gaccacctca ataaaggaac attaacccta tggacaataa gaccaaactg cgcttgggcg
     2641 gcctgatttt actgaccacc gccgttttaa gcctcattat cgtattgatt gtcgattcct
     2701 ggccgcttgc catcctgctt gcagccgtca ttgtcgctgc cgctgcgggc ggttttgttt
     2761 ggacatcccg ccgacagcaa cgccagttta tcgaacgcct gaaaaaattc gacatcgatc
     2821 ccgaaaaagg cagaatcaac gaggcaaacc tgcgccgtat gtaccacagc ggcggacaac
     2881 accagaaaga tgcgattacc ctgatctgcc tgtcgcaaaa atgttcggtg gacgaggcgc
     2941 acgctatgtt caaaaaacgc ccgacacgtc aggaaatcaa tcaaatggcg gcaaaacagt
     3001 cgcgcggtca gaaacgtccg caccgttaac cgccgcaagg catctttgca taaatgccgt
     3061 ctgaagcctg ttggcgtttc agacggcata ttctgattga aaagatgatg acactgaaaa
     3121 ccgccccgct caaacgccgc tttgccgcca tgctgtacga aatgctgctg gtcggtgcgg
     3181 caacctgttt ggcagcattg tttgccggta ttgccgccat ttttctgaat cccgtttcta
     3241 tcgcggtttc tgcattggta acgagtatcc tgataatggg atcatggtgg ctttattttc
     3301 gcgccaactg gcacggtcag gggcagacct tggcgatgag gacatggaaa atcggcttgt
     3361 gcgaccttaa cggcatacag ccgtctttgt acctgctgcg cctgcgcttt atttgggcgt
     3421 gcatatttat cgtcttcatt cctatgcttg cttatgccgg attgcgccac ttcctcggca
     3481 ttccgcccaa gggcgcggcc ggcgcggcat tgatttggct gattttaccg tgggggttcg
     3541 ccctgctgaa tcccgatcgg cagtttctgt atgattttct tgcaggaaca agattggtgg
     3601 cggtcaaagg aaagccttaa gcctttatac cgcaaaggtt tcaacctgaa aaaatgccgt
     3661 ctgaaagggc tttcagacgg catttgctta tcggggaaac cgattattcg atattctgca
     3721 cctgttcgcg catctgttcg atcaggactt tcagctcgac cgaggcttgg gtgcattcgg
     3781 tagcgatgga tttgctgccc aaagtgttgg cttcgcggtt taattcctgc atcaggaagt
     3841 ccagccgttt gccgctgctg cctttgtgtt cggtaacgat acggcgcact tcggcaatgt
     3901 gggtgcgcag gcggctgaat tcttcgtcga tgtcggattt ttgaataaag agggcaaatt
     3961 cctgttgcag cctgtcatta ttgatgtcgc cgactgcttc gacgaggcgg gcgcggattt
     4021 tttctttatg tgtttccagc agggtaggaa agagttcgct caatgcatct atgatttctt
     4081 ccatgctttc gaggcgttgt aacaggtgct cgcccaattt tttcccttcg cgccggcgtg
     4141 cggcagtaaa gtcttttaac gctttttcgg tcagttcggt aatgcttttt gccaattcct
     4201 ccgtattttc cctttggctt gccaatacgc cggggaaacg caggatgtcg gcaacgccca
     4261 gttttgccaa atcgtgatgc ttgcggaggt ttttgttgat ttcggcaagc tggttcacca
     4321 aatccgagtt gagttccaag gactgtctgc tgttttccgt atcttgaatt tggattttgc
     4381 attcgacttt gccgcgcgcg atatgggatg aaattttctc gcggataccg ctttccaaat
     4441 agcgcaaatc atccggcatc ctgatttgaa tgtccaaaaa gcggtggttg acggcgcgga
     4501 tgtcgaggtt gatgcgtttg ctgccgcact ctgccgccgc gttggcaaag ccggtcatgc
     4561 tgtggatgtg gatatttccg ctgctcatgt cgttctccga agcccgttaa aatggaatca
     4621 atatatcaca tctgtatggc ggcaagcgtt ttcgggtgtg aaaaattgaa ggttttgcag
     4681 cggcagattg gaatcacgct cttttgttgc tgcaaggaag ggaaatgtat agtggattaa
     4741 ccaaaaccag tacggcgttg cctcgcctta gctcaaagag aacgattctc taaggtgctg
     4801 aagcaccaag tgaatcggtt ccgtacgatt tgtactgtct gcggcttcgc cgccttgtcc
     4861 tgatttttgt taatccacta tatcaattcc gccaatctgt cggaaaagca gctgatgcgg
     4921 cagtgtctgg tgcatgtctg ctttttgatt tcggcgattg cgatggtttg gacggataaa
     4981 atcgtgtacg gcacgacgca caaaccgcat tgatgtttac caaataaaat acccgacaaa
     5041 acaatttgtc gggtatttta ttgcgtatat ttcaaaccgc ttcggcttct tcggtcagga
     5101 aaccacgcag tttctgcatg gcttttgctt cgatttggcg gatgcgttcg gcagatacgc
     5161 cgtattcggc ggcaagctgg tgcagcgtca gcccgccgtc gtcttgaagc cagcggcttt
     5221 ccacaatacg gcggctcctg tcatccagtt gcgccaaagc gttttgtaaa ccttctgttt
     5281 gcagggcgta atgcgcctgt ttcgatagtt gccggctcgg ttcggaatcg tggtcggcaa
     5341 gccagtcgat gggggcgaaa ctgtcctcgt cgtcgctgtt gtctgccatg atggcgatgt
     5401 cgtgtcccgt catgcgctgt tccatttcca gaacttcgga aagtttgaca cccaaatcgt
     5461 cggcgatgtc ttgtgcctct ttgggagaca gggcgttgag gtttttacgc atactgcgta
     5521 aattgaaaaa cagcttgcgt tgcggtttgg tggtggcaac gcgaaccaaa cgccagtttc
     5581 tcaaaataaa ctcgtggatt tcggctttaa tccagtgtac ggcaaatgaa aacagacgcg
     5641 cgcctctacc gggctcgtag cgtttgaccg ccttcatcag tccgatattg ccttcctgaa
     5701 tcaggtctgc ctgattcagc ccgtagccgt catagccgcg cgcgatggaa acgacgacgc
     5761 gcaggtggga caggatgagt tgtttggcgg cgttgaggtc gccctttatc cggcgttcgg
     5821 cgaggcgggt ttcttcttcc tgggacagca tcgggatgct gttgacggtg tggatgtatt
     5881 gttcgaggct gccgttgccg ctttggatgg cgggtaatgc gaaagcgtta ttcatttggg
     5941 gcatttcctt tcggctgaaa ctgcgtatcg gcggtttgct gtgttgggat gcagtatatc
     6001 actgcttggc ttgtattttg tatgtttggc aggagatatg cgctaaggtt tgaaagacag
     6061 gaaaattttg taaggcaggt ttgattgatt ttgtaaacct gatggctcaa ttcgatttca
     6121 gaattatatt acatacgtaa ttgtatgtaa atagccgttt tgaaaaaaga cagcccgtcc
     6181 ggacgggctg tgcaggtatc agtgttcttt gtttcggaag atgaaaagaa tcagtgcggc
     6241 tagggtcaat atgcccatca accaccatga actgccggtt ttcatatagg gcgtttcgcc
     6301 gacatagcct ttgatgtgtc cttccaatac ggtttccgta tcgggttggg cttgggcgat
     6361 gatgttgcct ttgggggaga tgatggcggt tgcgccggtg ttggtggcac ggaccatata
     6421 gcgtccgagt tccatagccc gcgcctgcga ttgttggagg tgctggtaca tggcgttgga
     6481 ttttccgtac cacgccatat tgctggcatt ggcaagcagt gtggcatctt tggcggcggc
     6541 aatcagttcg tcgccgaatc cgtcttcgta acagatgttg aaggcgattt tttggttttt
     6601 catcagcagg gcggattgct taccgccgcc tttgcggaag tcggaaaggg gcatattcat
     6661 cattttgtaa agcggcgtgg tcaggaaggg cagcggtttg tattcgccga aggggacgag
     6721 gtggtttttg gcgtagtagg ggatgccgtc ctgattgttt tcctgataac cggtcaggtt
     6781 gatgacggcg ttttcgtaac cgttgccgtc cgaagtgtat tggctgatgc cgacggcgag
     6841 cgcgctgccg ttgttttgcg cctgttcggc aaattttgcc agtatgtttt ccggcaggtt
     6901 ttggcgcata acggggatgg cggtttcggg caggatgacg atgtcggcag tggttttgcc
     6961 gacctgttcg taatatttct gtatggtcgg gatgacttgg tcttcacgcc atttgagggt
     7021 ttggtcgatg ttgccttgaa gcagggcgac ggtgctgcgg ctgccgtcgg ggcgggtgaa
     7081 gtcggtttgt cgggcggtgt agcctgcggc aagcagggcg gcaatcagga taattggaag
     7141 caggcgtttg cccgaacgtg cggtgttatc actcgccaaa accagccaga caccgagaaa
     7201 ggcggttgcc agtgtaacca tgtggatgcc gcccaatggg gcaaagccgg cgagcgggct
     7261 gtccggggtg atttgggagt agccgattgc gccccagccg aatccggtca ggaaacgttc
     7321 gcgggtaaac tcggtcagtg tccacaggat gggcagtacc aaaccgattt ttatgccccg
     7381 aggcagggta aattttttcc acagccagaa acacagtgcc ggataaaggg caaggtaggc
     7441 ggggagtagg aaggtcagcg gtacggcata gaggtcgggc aggccggaaa cgtcgtgcag
     7501 ggcggtgtgt atccagtaga actgtgtcgt gtatgcggtc aggccgaaca ggtaggcgga
     7561 agagacagca aaacgcggac gcagttcgat gaggcggacg aaggcaccga aaatcaaggg
     7621 catcagccaa aagtggtagt agggtgcgaa ggtaaagggg gtggcggcgg caaaaaggat
     7681 gagcaaaggc cagtagaggg cggggtgctg ccagtatttg tccagtttgg aaaccatatt
     7741 catctgtctg ttcggaagat accgtctgaa catctttcaa acggcatcgg tatttgaaaa
     7801 agaaatcaat gcctgccgaa acgattcatc agcggcaagg cgggggcgca ggcaatcgaa
     7861 ccggaaagca gcccgacaac gaggttggcg aagtactccg cccagccagc gtcccagtgt
     7921 tgcgtgtgca ggaaatcgtg cagaaggccg aggttgtggg cgaccagtac gccgccgata
     7981 agaaacatgg caagcgtgcc gaccacgctc aaaccgcgca taaagcaagg cataaaggca
     8041 gtcagcattt gccccaaact gcgcgaaaag gtttgtgggc ggcgcatcag cagcatgcct
     8101 aagtcgtcga gtttgacgat gacggcaacg attccgtaca ccaaaacagt catgccgatg
     8161 ccgattgccg ccattacgag catgcgcgtc atgtcggtgc agaaacttgt gcagcagctt
     8221 ttctacgcct tcaaagcaca gataaatgcc gcctgccgtc aaaagcggcg taatgagttg
     8281 cggcaggaag gcggaaagca gcagggccgc aggcaccaaa accggcttgt tggaaaaaga
     8341 acctttcgcc atcgaccaaa caatcggcaa ctcgcgttct gccgatacgc ccgtaacccg
     8401 gttggcattg ggtgccaaat cgtcgccgac cacgccggcg gttttctttg cggcggcttt
     8461 ggtcatcagg gcaacatcgt ccaaaacggc ggtgatgtcg tccggcaggg taaatagtga
     8521 ggcaaatgcc attaaagaat cctgaaatgc ggcgcaaagt ccgacattat ataggagaac
     8581 gcggatttgg gcggtttcag gcggcatgaa acaggaaaat gccgtctgaa cgctgtggcg
     8641 gacgtgaagt aaagtttcgt gaaaagaaaa tgccgtgtta cagtctttcg attttaattt
     8701 aatgaatttt aagggagaat cgttagcgtg gattggatgg gcagtctgtt cctgccgggt
     8761 ggcgcactgt tgtttctgag cgtggtttcg accactttac ccgcacgttt gggaatgcct
     8821 ttgctgctgg tttctcccgc cggcgtgttg gacggggcgg cggaagcctt ggcgattgcg
     8881 gcgttcctga tgctggtcgc gcgtccgccg gcagtgttcg gcggtttgtg gaaattcaat
     8941 tacagcctgc gtgaaaaggc gtatatcagt tggttgggtt tggcggagcc gtgccgattt
     9001 cgccggtgat gatgccgccg gtaacgggcg ttcccaattc gcacctgctg tttgatgtgg
     9061 cgtttgccgt ggtggtgctg tcgctgctga ttcggggaat gacgattcct gtgatggcgc
     9121 ggctgttgaa ggttgccatg cccaacaagc ccgaaccgaa agatacgcat gatatttggc
     9181 tggcgaaaaa ggaaattgtc agaatgtcgg cgtttaaagt ggttgccgaa tctgaagcgg
     9241 agggacacca tcccgatacg gtcgaaccga tttccgattc gtttggcgca cgctgtttcg
     9301 cattgatacg caacggcatc cgaatcgaaa tgcagtccga caccgtgctt caggcgggga
     9361 tttggcgtgg tacatcctgc ccgacggcaa ggtcgata
//
LOCUS       DAWGBY010000071         9380 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.071, whole genome shotgun sequence.
ACCESSION   DAWGBY010000071 DAWGBY010000000
VERSION     DAWGBY010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9380
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.071"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(97..537)
                     /locus_tag="WHG62_001405"
     CDS             complement(97..537)
                     /locus_tag="WHG62_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725503.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSS
                     GFKLDSSSKSFAKFIEAANFEHIPTGAKARINAKITASVSRAGVLAGVGKLARLGAKF
                     STRAVPYVGTALLAHDVYETFKEDIQARGYQYDTETDKFVKVSG"
     gene            complement(479..796)
                     /locus_tag="WHG62_001406"
     CDS             complement(479..796)
                     /locus_tag="WHG62_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ1725504.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMALIAQKEFEEFVNNVKE
                     YDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNS
                     MFE"
     gene            complement(924..1202)
                     /locus_tag="WHG62_001407"
     CDS             complement(924..1202)
                     /locus_tag="WHG62_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725505.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
     gene            complement(1209..1493)
                     /locus_tag="WHG62_001408"
     CDS             complement(1209..1493)
                     /locus_tag="WHG62_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725506.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAAPL
                     ALAAHANATLPDTAKNALEAAKADGMEAGWIVVGIFAALFVFSIVKRVMK"
     gene            complement(1501..1698)
                     /locus_tag="WHG62_001409"
     CDS             complement(1501..1698)
                     /locus_tag="WHG62_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725507.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            complement(1703..1993)
                     /locus_tag="WHG62_001410"
     CDS             complement(1703..1993)
                     /locus_tag="WHG62_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725508.1"
                     /translation="MNIQLQGHIVGVKKINGQIEGKSFDYCCLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQPVKKG"
     gene            complement(2038..3381)
                     /locus_tag="WHG62_001411"
     CDS             complement(2038..3381)
                     /locus_tag="WHG62_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ1725509.1"
                     /translation="MEDKQGMKKAVAGVMTDASSDGRKPATASNLPPLSNRGGTETET
                     AGRVQEVFECYEKYITDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVRVS
                     LLEDEDFIRAASMLAEEVFGFCIYKESKGSGGRFYERCWLMGSEDVLYGRVHFGGQNN
                     TILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIVKDFFNGEYSPNQAREDRN
                     KGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKT
                     STWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFVQKATRIHAVKEDKVISAD
                     RYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQA
                     IHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
     gene            3483..3698
                     /locus_tag="WHG62_001412"
                     /pseudo
     CDS             3483..3698
                     /locus_tag="WHG62_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003792345.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(3850..4908)
                     /gene="trpD"
                     /locus_tag="WHG62_001413"
     CDS             complement(3850..4908)
                     /gene="trpD"
                     /locus_tag="WHG62_001413"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ1725510.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGVVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQIAQSISQTGIGFMFAPNHHS
                     AMRYVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(4972..5562)
                     /locus_tag="WHG62_001414"
     CDS             complement(4972..5562)
                     /locus_tag="WHG62_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ1725511.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRNTMPECLEVTAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            5982..8258
                     /locus_tag="WHG62_001415"
     CDS             5982..8258
                     /locus_tag="WHG62_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ1725512.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHETEQSVGLETVTVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDVDYDNPGLSCGFHDDDDAHAHAHNGKPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYHHDEKAGDAVENFFNNQTQNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSATSEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
BASE COUNT         2362 a         2389 c         2115 g         2514 t
ORIGIN      
        1 taacacctcc taattttacc caaatacccc cttaatcctc cccggatacc cgataatcag
       61 gcatccgggt taccttttag gcggcaacag gcgcacttag cctgagacct ttacaaattt
      121 gtcggtttcg gtgtcgtatt ggtagcctcg tgcctgtatg tcttctttga aagtttcgta
      181 tacgtcgtgg gctaaaaggg ctgttccgac atagggaacc gcccttgtgc tgaatttcgc
      241 gcctaagcgg gcaagtttgc cgacccccgc caatacgccg gcgcgggaaa cgctggcggt
      301 tattttggcg ttgattcggg cttttgcgcc cgtagggatg tgctcaaaat ttgccgcttc
      361 tatgaatttg gcaaaactct tagaacttga atctaattta aaaccacttg attttaaatt
      421 attacttgat tgaaatttaa tttgtgattt ttctaatctt acaggttcag aataagaatt
      481 actcgaacat agaattaaaa tcagaactat cggtgtactc ttgataaacg aattcatgaa
      541 cagtttttcc gttctcttct gattttctta taaaaataac agattcatca gaaaaataaa
      601 tcttccaaat attatgtgcg actctcttat ttaagaaata agagaaactc tctaaaatat
      661 cgtactcttt tacgttatta acaaattctt caaattcttt ctgagcaatt aatgccatcg
      721 attgcccaaa gtacttacta gacggctggt atttataaag tgccaactgc gcctgcgtaa
      781 taaacggctt gttcatggtt ctgcctttca atgattgttt tgaaagcctg attttgacac
      841 cataacttca tgcgctcaat tcttaaacag aaccgccccg attaatacgg gtacggaaac
      901 gccgagataa aaataaaaat ccatcatttc aaaacctttt tcagcaggga aacaaagtaa
      961 acggacgcga ggatgccgaa tactatccag cctgtttcaa gaccgctttg caggttgtct
     1021 ttcggactgc attccgccaa taaaagcctt agcggctgac cgtccgacat cttccacagg
     1081 ctgccgttat attccggcct gacaatctgt ccgttttctt tgattcttgg taccaccaag
     1141 ctgaaataaa ggttttcagc ctggtgcttc tcaagacatt tatttccgac ttggtagtac
     1201 atgccgtctt acttcatcac tctcttaacg atggaaaaca caaaaagcgc ggcgaaaatg
     1261 cccactacaa tccaaccggc ttccataccg tcggcttttg cggcttccaa agcgtttttt
     1321 gctgtatcgg gcaacgttgc atttgcatgt gcggccaaag ccaggggagc agctgttaca
     1381 acagccagtt ttgcgccgta tttacggcag gtgttaataa atttcatgat attttccttc
     1441 aaaaagtgtt tggcggtaat ggatggagcg tttttcagac gaccgccgaa catccgaaaa
     1501 tcagtctttc aaaaatccga atacgacaaa ttcgtattgg ttgccgattt cttccaaacc
     1561 tgcgttaatc gcttcttcga agtcgtagaa ataatcggca ttggtgatta atttggtatg
     1621 tccgatgtcg cccgtttcag gagagagata cagaaagtcc cctgttgata cggactggac
     1681 aacatagact ttctgcattc aatcagcctt tcttaacggg ttgaaaaccg atgactttca
     1741 gtttttgggt tttgcccgta gtgacgattt ctacgttcag gtttgcttcg atcggaaatt
     1801 gggcgtttcg gaactgctcg aaattggcag agccgccgaa atcgtattca gtagtagagc
     1861 tgcccaatgc gttgccttgg gagctgtcta agggtgtggc gacaatcagg cagcaatagt
     1921 cgaagctctt gccttcgatt tgtccgttga tttttttaac gccgacgatg tggccttgaa
     1981 gttggatgtt cattttttgg tttccttgtg tgattaaacg tctttcggac agacacttta
     2041 agcccatgaa atcggtagtc ttgcgaattt gtcgtaaatg aagttgttat agctttcttc
     2101 attgttgacg tgtttttgct gttcaagctg tttttcaaga ttctcgtaat attcgtacat
     2161 atagtaaggg tctttgtacg gtttgaatgc gggctgttca tgaatggctt gagctttcaa
     2221 aaaggcgcag tcgtaggctt cgggagccaa agacttgggc agcttgtgat gactcggctc
     2281 aatcagttca aacagtttgg ctttgtccaa ttcgggaaaa atgaatttca gaccgtttgc
     2341 cgcacgtccg aactgttttt ttacccattc aaggtagcgg tcggctgaaa tgaccttatc
     2401 ttccttaacc gcgtgtatgc gcgttgcctt ttggacgaat cgttcgcaaa tcggatatgc
     2461 gccgccgaaa tattcgcccg gattctgcaa aacttcgaaa gggataacga tatcttttgc
     2521 tttgaattca atttcaaatc gcgtccatgt gcttgtttta tcgcccaact gcttgccttt
     2581 ttcatagacg cggacatatt tggacgattc acgggagccg ataccatagg tcttgccttt
     2641 ggtcattttg gcttcatcgt cttcttccca atctgacccc aaacattcgc cttttggttt
     2701 gacgtgatga caggtaaaca tacctttatt tcggtcttca cgggcttggt tcgggctgta
     2761 ttcgccgttg aaaaagtctt ttacgatatc aacgcgtgtg atttttgggc ggattgcatt
     2821 agtcaggaat gcgaaaagtc gtgattccca gccttctttt gcgacgccgc aaccggtgcc
     2881 ggtcagttcg aaaagaatgg tattgttttg tccgccaaaa tggacgcgac cgtataggac
     2941 gtcttccgaa cccatcaacc aacagcgctc atagaaacga ccgcccgagc ctttggattc
     3001 tttgtagata cagaaaccga aaacttcttc ggcgagcatg gacgcggcgc gaataaaatc
     3061 ttcgtcttcc aaaagactta cacgaacgcc gtatttatcg aaaaaggttt tttcatgaaa
     3121 tgaaaagcta atttgatcga tgaacgccga atcagataca ccgcgacgaa gcggaacgcc
     3181 taaaaggttt cctttgccgt ctgttatgta cttttcataa cactcgaaga cttcttgaac
     3241 cctgcccgcc gtttcggttt ctgtaccccc cctgttagat aaggggggaa gatttgaagc
     3301 ggttgccggc ttcctgccgt ccgatgacgc gtccgtcatc acgccggcaa ccgccttttt
     3361 catcccttgc ttatcttcca tggtgcgaat cctcaaaaac gggcaaaaaa aagccctgtt
     3421 acttgtagaa agtaaaggac gttaattttt gttaatcgtc ccttcttagg gacgcaatat
     3481 ataaggttta taccgtcgtt gttcctaatg cgcaatcagc gacattgttg ccaattatcc
     3541 gaaagaaagt taagcctgat ggcattgtat acacggatac ctttcgtagt tatgatgtgc
     3601 ttgatattag tgaatttagc catttacgta agtttaacgg cattcccaaa gagcatttgg
     3661 ggctgcattt aaagaaatgc caatggcatt ttaaatagaa tctcaaattc agattttaag
     3721 acaattagtt aatgggaatt tggtctggtt atctagtaca gccccaagtt tttatataaa
     3781 aacagtttgg taagttctct tcgtgaagtg cttatgtttt gccacaaaag ttccataatc
     3841 atggcggcat cacccaagct ccatctttcc aagaaaatgg catctttgtt gtggttgaaa
     3901 accgacaaac tcctcttttt tcgatttggc cctgcctgaa tcgatggctt cccgtgcggc
     3961 agatatgccg tctgaaagcg aagcagcgac atttccggca tacagggcgg cggcggtgtt
     4021 gagcaatacg atatcgcgcg cagccccttc tcttccttcc agcacctcat tcattttcaa
     4081 caaagattcc tgagtattgg caactttgat ttcatccaaa ttgcggcggg tttcgatacc
     4141 gaaatcttct gggcggatgt cgtattcgct gatttttccg tctttgagct cggcaacgcg
     4201 tgttttgccc gtcagtgtaa tttcatccaa accgccctcc ccgcaaacaa ccaaaacatg
     4261 cttggagccg agctgttgca atactctgga aaggatgccg cacaaatcgg tgtggaacac
     4321 gcccaaaagc tggttcggcg cgcccgcagg attcgttaac ggacccaata tgttgaaaat
     4381 acttcggaaa ccgagcgaac ggcgcaccgg ggcgacatag cgcatagcgc tgtggtgatt
     4441 gggtgcgaac ataaacccta taccggtctg gctgatactt tgggcaatct gttcgggagt
     4501 caggttgagg tttgcgccca tttgctccat cacgtcagcc gcaccgctgg aggaagagac
     4561 cgaccggcct ccgtgtttgg caaccttcgc gcctgccgct gcggcaacaa acatcgaagt
     4621 cgtcgaaata ttgaaggttt tggcaccatc cccgcccgta ccgacgatat cgaccacccc
     4681 ctctgcattc tccagcggca cttttgtcgc aaactcgcgc atgacggctg cagctgcggt
     4741 aatttcggaa acggtttcaa ccttgatacg caatcctgtc aaaatcgccg caatttgttc
     4801 gggcggcact tttccgctca tcatttggcg catcaagtcg gtcatttcat cgtaaaacaa
     4861 ctcattattg ctgattaatc gttcgatagc ctgttgcggt gtaatcattt tttgtcctcc
     4921 gttcaatatt cggacgaaaa tgccgtctga agggcttcag acggcatcac gtcagatttt
     4981 ttgcggtttg aagttttgaa attcgattaa aaaattgttt aacatatcat gtccgtgctc
     5041 ggtcaagagg gcttcggggt ggaactgcac gccctcgacg gcatattcct tatggcgcac
     5101 acccataatc tcgccgtcct cagtccaagc cgttacttcc aaacattcgg gcatcgtatt
     5161 ccgatcgata acgaggctgt gataacgcgt acaggtaacc ggattgggca aacccttaaa
     5221 catacccttg cccgaatggg acacgggcga caccttaccg tgcatcagcg ttttagcgcg
     5281 gactatcctg ccgccgaacg cctcgcctat cgtctgatgc ccgaggcaca cgcccataat
     5341 cggcagccgg ccggcaaaat ggcgcatcgc cgccacggaa atccccgctt ctttgggcga
     5401 acacgggccg ggtccgataa cgagatattg cggattcaat gcctcgattt cttccaacgt
     5461 aatatcatcg ttgcggcgca cggcgacttc ctgccccaat tcagcgaaat actggacgat
     5521 gttgtaagta aaactgtcgt aattgtcgat aaacaaaagc attttgtgat taacctattg
     5581 atttataatt tgtttgttat taactgcatt tccgatacca ccatccatac cccttatatc
     5641 ttagcgtgcc cgatgcgccc tcgtgaacct gggcagagcc tcgcgttctg acaagtacgc
     5701 cattttgcca ccttttcgac cgttcgggaa cgtgccgttt ttatgcactc ataaattttg
     5761 gttatcccgc agccgaacat agtgggcaaa cacagcggaa tctgcgtcaa catcaaccgc
     5821 acccccgaat gacggcggat acaaatggac accgcccgat gccgcaaccg tttcatttga
     5881 aaaacttttg cctatgccct ctgagtgttc tcaaaatctt atgatataaa aaatgtaatg
     5941 ttatataata acaaactttt gaaatgcgac gagaagccaa aatggcacaa actacactca
     6001 aacccattgt tttatcaatt cttttaatca acacacccct cctcgcccaa gcgcatgaaa
     6061 ctgagcaatc ggtgggcttg gaaacggtta ccgtcgtcgg caaaagccgt ccgcgcgcca
     6121 catccgggct gctgcacact tcgaccgcct ccgacaaaat catcagcggc gacaccttgc
     6181 gacaaaaagc cgtcaacttg ggcgatgctt tggacggcgt gccgggcatt cacgcctcgc
     6241 aatacggcgg cggcgcgtcc gctcccgtta ttcgcggtca aacaggcagg cggattaaag
     6301 tgttgaacca tcacggcgaa acaggcgata tggcggattt ttcgcccgat cacgccatta
     6361 tggtagatac cgccttgtcg caacaggtcg aaatcctgcg cgggccggtt acgctcttgt
     6421 acagctcggg caatgtggcg gggctggtcg atgttgccga tggcaaaatc cccgaaaaaa
     6481 tgcctgaaaa cggcgtatcg ggcgaactcg gattgcgttt gagcagcggc aatctggaaa
     6541 aactcacgtc cggcggcatc aatatcggtt tgggcaaaaa ctttgtattg cacacggaag
     6601 ggctgtaccg caaatcgggg gattacgccg taccgcgtta ccgcaatctg aaacgcctgc
     6661 ccgacagcca cgccgattcg caaacgggca gcatcgggct gtcttgggtt ggcgaaaaag
     6721 gttttatcgg cgtagcgtac agcgaccgtc gcgaccaata tggtctgcct gcccacagcc
     6781 acgaatacga tgattgccac gccgacatca tctggcaaaa gagcttgatt aacaaacgct
     6841 atttacagct ttatccgcac ctgttgaccg aagaagacgt cgattacgac aatccgggct
     6901 tgagctgcgg cttccacgac gacgatgatg cacacgccca tgcccacaac ggcaaacctt
     6961 ggatagacct gcgcaacaaa cgctacgaac tccgcgccga atggaagcag ccattccccg
     7021 gttttgaagc cctgcgcgta cacctgaacc gcaacgacta ccaccacgac gaaaaagcag
     7081 gcgatgcagt cgaaaacttt tttaacaacc aaacgcaaaa cgcccgcatc gagttgcgcc
     7141 accaacccat aggccgtctg aaaggcagct ggggcgtgca atatttggga caaaaatcca
     7201 gtgctttatc tgccacatcc gaagcggtca aacaaccgat gctgcttgac aataaagtgc
     7261 aacattacag ctttttcggt gtagaacagg caaactggga caacttcacg cttgaaggcg
     7321 gcgtacgcgt ggaaaaacaa aaagcctcca tccgctacga caaagcattg attgatcggg
     7381 aaaactacta caaccatccc ctgcccgacc tcggcgcgca ccgccaaacc gcccgctcgt
     7441 tcgcactttc gggcaactgg tatttcacgc cgcaacacaa actcagcctg accgcctccc
     7501 atcaggaacg cctgccgtca acgcaagagc tgtacgcaca cggcaaacac gttgccacca
     7561 acacttttga agtcggcaac aaacacctga acaaagagcg ttccaacaac atcgaactcg
     7621 cgttgggcta cgaaggcgac cgctggcaat acaatctggc actctaccgc aaccgcttcg
     7681 gcaactacat ttacgcccaa accttaaacg atggacgcgg ccccaaatcc atcgaagacg
     7741 acagcgaaat gaagctcgtg cgctacaacc aatccggtgc ggacttctac ggcgcggaag
     7801 gcgaaatcta cttcaaaccg acaccgcgct accgcatcgg cgtttccggc gactatgtac
     7861 gaggccgtct gaaaaacctg ccgtccctac ccggcaggga agatgcctac ggcaaccgtc
     7921 ctttcatcgc gcaggacgac caaaacgccc ctcgcgttcc ggctgcgcgc ctcggcttcc
     7981 acctgaaagc ctcgctgacc gaccgcatcg atgccaattt ggactactac cgcgtgtttg
     8041 cccaaaacaa actcgcccgc tacgaaacgc gcacgcccgg acaccatatg ctcaacctcg
     8101 gcgcaaacta ccgccgcaat acgcgctatg gcgagtggaa ttggtacgtc aaagccgaca
     8161 acctgctcaa ccaatccgtt tacgcccaca gcagcttcct ctctgatacg ccacaaatgg
     8221 gccgcagctt taccggtggc gtaaacgtga agttttaaaa tcggacaggc aaacaaaaaa
     8281 ggttttcaga cggcattctg aaaacctttt ttctttttaa tcaatttttt aggaaatatg
     8341 gcaaagacaa agaacaaacc actatgccat cattcccatt ttttctgttt catcattctt
     8401 gctttcacgc catcattctc gcaaaagcag aaaaatcaaa agcaaaaacc caagatcaca
     8461 tcattcccgc gcaggcggga atccaattca ttcggtttca gtcgtttccg ataaatcgcc
     8521 ttagcatttg ggttctagat tcccactttc gtgggaatga cggcgtaaag gtttctgttt
     8581 tttaagtttt aggtaactaa tgagtcgtca ttcccgcaca ggcgggaatc caattcgttc
     8641 ggtttcagcc gtttccgata aatcgcctta gcatttgggt tctagattcc cattttcgtg
     8701 ggaatgacgc gtaaaggttt ctgtttttta agttttaagt aactaatgag ttgtcattcc
     8761 cacgcaggcg ggaatccggt ctcttcggtt tcagtcgttt ccgataaatc gtcgtaacgt
     8821 taagttcccg gattcccact ttcgtgggaa tgacggcgta aaggtttctg ttttttaagt
     8881 tttaggtaac taatgagttg tcattcccac gcaggcggga atccaattcg ttcggtttca
     8941 gccgtttccg ataaatcgcc ttagcatttg ggttctagat tcccactttc gtgggaatga
     9001 cggtgtaaag gtttctgttt tttaagtttt aagtaactaa tgagttgtcg ttcccacgca
     9061 ggcgagaatc caattcgttc ggtttctgtt atttccgata aatcactgta acgttaagtt
     9121 cccggattcc cactttcgtg ggaatgacgg cgtaaaggtt tctgtttttt aagttttaag
     9181 taactaatga gttgtcgttc ccacgcaggc gggaatccgg tctcttcggt ttcagtcgtt
     9241 tccgataaat cactgtaacg ttaagttccc ggattcccac tttcgtggga atgacgcgga
     9301 aaggtttctg ttttttaagt gttaggtaac taatgagttg tcattcccgc gcaggcggga
     9361 atctaattcg ttcagtttct
//
LOCUS       DAWGBY010000072         9356 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.072, whole genome shotgun sequence.
ACCESSION   DAWGBY010000072 DAWGBY010000000
VERSION     DAWGBY010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9356
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.072"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(148..1071)
                     /locus_tag="WHG62_001416"
     CDS             complement(148..1071)
                     /locus_tag="WHG62_001416"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ1725513.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
     gene            complement(1827..2318)
                     /locus_tag="WHG62_001417"
     CDS             complement(1827..2318)
                     /locus_tag="WHG62_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ1725514.1"
                     /translation="MRGNDGGAVSVAPDKFLKLKISSFPQRQKTKIRNLKFVILLAEG
                     QKSAVTEYYLNHGIWPKNNTSAGVASTPSDIKGKYVKEVTVANGVITATMLSTGVNKE
                     IQGKKLSLWAKRQDGSVKWFCGQPVTRNDTAKDDVAADNDATKKIDTKHLPSTCRDES
                     GAT"
     gene            complement(2437..2799)
                     /locus_tag="WHG62_001418"
     CDS             complement(2437..2799)
                     /locus_tag="WHG62_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ1725515.1"
                     /translation="MTGFNDAAGVASVSTDIKGKYVQSVTVANGVITAQMASSGVNKE
                     IQGKKLSLWAKRQDGSVKWFCGQPVQRDAKAANNADGVTADSGNEKIDTKHLPSTCRN
                     ESTAGCIETPPTAFYKNT"
     gene            complement(2846..3208)
                     /locus_tag="WHG62_001419"
     CDS             complement(2846..3208)
                     /locus_tag="WHG62_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ1725516.1"
                     /translation="MASSNVNKEIKDKKLSLWAKRQDGSVKWFCGQPVTRNDTAKDDT
                     VAADTDAAKKIDTKHLPSTCRDDSSTGCIETPRADFKHFQKISRYRVLPESRHMAEKL
                     RHSRAGGNLGLSARKLIG"
     gene            complement(3237..3550)
                     /locus_tag="WHG62_001420"
                     /pseudo
     CDS             complement(3237..3550)
                     /locus_tag="WHG62_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
     gene            3710..3775
                     /locus_tag="WHG62_001421"
                     /pseudo
     CDS             3710..3775
                     /locus_tag="WHG62_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(3866..4000)
                     /locus_tag="WHG62_001422"
                     /pseudo
     CDS             complement(3866..4000)
                     /locus_tag="WHG62_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
     gene            4121..5074
                     /locus_tag="WHG62_001423"
     CDS             4121..5074
                     /locus_tag="WHG62_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ1725517.1"
                     /translation="MNHKKIVVLDADTLPGRVFHFDFPHELAVYGTTGADETAERVHD
                     AHVVITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAEAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHASAVREGYVSFEDAVRAADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(5149..7206)
                     /gene="metG"
                     /locus_tag="WHG62_001424"
     CDS             complement(5149..7206)
                     /gene="metG"
                     /locus_tag="WHG62_001424"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ1725518.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECH
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGVDFDEYFKADSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRLKDVADSALLAKLAAESDTIAEQYENREYARALRD
                     IMALADAVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AAKFLNLEAITWANTRETLGKHAINKYKHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EEGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     AFYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDTGAQPGD
                     KVG"
     gene            complement(7322..9160)
                     /gene="glmS"
                     /locus_tag="WHG62_001425"
     CDS             complement(7322..9160)
                     /gene="glmS"
                     /locus_tag="WHG62_001425"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ1725519.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGNIK
                     RVRRVGRVQLMEDAAREKHLNGSLGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPSDVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGELSPVVHTIPVQLLSYHVALARGTDVDKPRNLAKSVTVE"
BASE COUNT         2000 a         2238 c         2684 g         2434 t
ORIGIN      
        1 caatttatcg ggaatgactg aaactcaaaa aactggattc ccactttcgt gggaatgacg
       61 aattttaggt ttctgttttg gttttttgtc cttgtgggaa tgatgaaatt ttaagtttta
      121 ggaatttacc ggaaaaaata gaaagcgtta tccacaagtt ctgatgttca gctcgtgaaa
      181 tgcgtcgggc aaatcatcgc tgtcggcaaa ttccacccgg tcgtaagccg tttcgtctgc
      241 caaaaccgcg cgcaagagtg cgttgttgat ggcgtgtccc gatttgtagc cttcaaacgc
      301 gccgacaatc ggatgtccga cgatatacaa atcaccgatg gcatcaagga ttttgtggcg
      361 cacaaactca tcgggatagc gcaagccttc aggattcagg acatccgtgt cgtcaatcac
      421 gatggcgttg ttcaaattgc cgcccaaacc cagattgtgg gcgcgcatca tttccacttc
      481 gtgcataaag ccgaaggtgc gcgcgcgcgc gatttcgtcg atgtaggatt tgccggcgaa
      541 atcaatttca aaagtgggcg agctgcggtt gaaaaccgga tggtcgaatt cgatggtcag
      601 cgttacctta aagccgtcat acggcgtaaa gcgcacccat ttgcccgctt ctttgatttc
      661 gacaggcttg aggattttca aaaaacgctt ttgcgccttt tgatcgacca cgcccgcatc
      721 ttgcaaaagg taaataaacg gcaggctgga gccgtccata atcgggattt cgggcgcgtt
      781 cagctcaatc agcgcgttgt cgataccgta ggcggacagc gcggacataa tgtgttcgat
      841 cgtgccgacg cgcacgcctt tgtcggtaac gatggtggag gaaaggcggg tatcgttgat
      901 caaataaggg gtcagcttga tttgttcgcc catctcgccg tccaaatcgg tacggcggaa
      961 ggaaatcccg ctgttttcag gcgcggggtg cagggtcagc gcgacgcgtt cgccggaatg
     1021 cagcccgact ccggtaacgc tgatggattt cgccaaagtt ctttgcagca taaaccgctc
     1081 ccttatcaat ggggtaagtt ttggaataat acgataaaac cggaaaaaca ggctatgttt
     1141 ttccatagta tttgccaatg tatccgtttt caatacgtaa gccgcataaa aatgtatagt
     1201 ggattaacaa aaatcaagac aaggcgacga acccgccccc ctcccgaaaa acgcaaaaaa
     1261 tgccgtccga aaacctttcg gacggcattt tcgcgtaaac cgtcattccc acaaggacat
     1321 aaaaccaaaa cagaaaacca aaaacagaaa cctaaaattc gtcattccca cgaaagtggg
     1381 aatccagaat cccggacttt cagataatct ttgaatatta ctgttgttct aaggtctaga
     1441 ttcccgcctg cgcgggaatg acggcagagc ggtttctgtt ttttccgata aattcctaaa
     1501 acttaaattt tcatcattcc cacaaggata gaaaaccaaa aacagaaacc tacatcccgt
     1561 cattcccgag taggcgggaa tccagtccgc ttgttcggta aatgagaggg cggattgcgc
     1621 gcctgtcaga taaaccacgt gtttaaacgg gcggcaatga ggtacgcgca gagccttgaa
     1681 gcgcagtcga tatattattt tccaccaaaa cggacgaccc cgcttgcctt gcaaaccttt
     1741 aaaaatgaag ccacccggat taatccgagt ggccgtggaa aatcatttac cgcttgattt
     1801 atttaaaatt tatggtataa tttgccttag gtagcaccac tttcatcgcg gcaggttgac
     1861 ggcaggtgct tggtgtcgat cttcttggtg gcgtcgttgt cggcggcaac gtcgtctttg
     1921 gcggtgtcgt tgcgcgtaac cggctgtccg cagaaccatt ttaccgaacc gtcttgacgc
     1981 ttggcccaca gggagagttt tttgccttgg atttctttgt ttacgccggt tgaaagcatt
     2041 gtggcggtaa tgacgccgtt tgcgactgta acttccttaa catatttgcc tttgatgtcg
     2101 gagggggtgg atgccacgcc ggcagaagta ttgttttttg gccatatgcc gtgattcagg
     2161 taatactcgg tgacggctga tttttgacct tcagccaaaa gaatgacaaa ttttaggttt
     2221 cttattttgg ttttctgtct ttgagggaat gatgaaattt tgagttttag gaatttatcg
     2281 ggagcaacag aaaccgctcc gccgtcattc ccgcgcaggc gggaatctag gtctgtcggt
     2341 acggaaactt atcgggaaag cggtttcttg agattttgcg ttctggattc ccactttcgt
     2401 gggaatgacg ggatgtaggt tcgtgggaat gacggtttag gtatttttat agaaagccgt
     2461 aggtggtgtt tctatgcaac cggcagttga ttcattgcgg caggttgacg gcaggtgctt
     2521 ggtgtcgatt ttttcgttgc cgctgtcggc ggtaacgccg tcggcgttgt tggcggcttt
     2581 ggcgtcgcgc tgaaccggct gtccgcagaa ccattttacc gaaccgtctt gacgcttggc
     2641 ccacagggag agttttttgc cttggatttc tttgtttacg ccgcttgaag ccatttgggc
     2701 ggtaatgacg ccgtttgcga ctgtaacgct ttgaacatat ttgcctttga tgtcggtgga
     2761 gacggatgcc acgccggcgg catcattaaa tcccgtcatt cccacgaaag tgggaatcca
     2821 gaacgcaaaa tctcaagaaa ccgttttacc cgataagttt ccgtgccgac agacctagat
     2881 tcccgcctgc gcgggaatga cgaagttttt cggccatgtg ccgtgattcg ggcaatactc
     2941 ggtaacggct gattttttgg aagtgtttga agtcggcgcg tggtgtttct atgcaaccgg
     3001 tagatgaatc atcgcggcag gttgacggca ggtgcttggt gtcgatcttc ttggcggcgt
     3061 cggtgtcggc ggcgacggtg tcgtctttgg cggtgtcgtt gcgcgtaacc ggctgtccgc
     3121 agaaccattt taccgaaccg tcttgacgct tggcccacag ggagagtttt ttgtctttga
     3181 tttctttgtt tacgttgctt gaagccatta tgtcagacgg tattgcccgg gcagctttat
     3241 tcgtacactt tcagcagctc gacttcaaat atcaaagtgg cgtgcggggg aatcacgccg
     3301 ccggcgccgt gtgcgccgta gcccatttcc gaagggatgg tcagcttgcg tttgccgccc
     3361 tccttcattc cgccgaagcc ttcgtcccag cctttgatga cttgtccgac gccgagcgtg
     3421 atggtcagcg gctggcggcg aatttggtgc cgtcttccag ccaacctgtg taatgcacgg
     3481 taatctcttt gcctttaact gcttcttttc cgaagccttc ctgcaaatct tcaataatca
     3541 ggctgcccat atttgtcctt tcgttgcttg ttggttaaaa cggcaagggt aacataccgt
     3601 ccggcgaagt caaatgccgc tcaaacgtca gctgctccgg tgcagctgaa acggctgtgt
     3661 ttgtttgact gttttatttt tttcgtaaag gttccatgct ttttcatgga aatatagtgg
     3721 attaaatttt aatcaggaca aggcgacgaa gccgcagaca gtacaaatag tacggaaccg
     3781 attcacttgg tgcttcagca ccttagagaa tcgttctcgt tgagctaagg cgaggcaacg
     3841 ccgtactggt ttttgttaat ccactataga aaacgacggt gttgattagg ggctcgacca
     3901 gcgcgaccgc ccccgatacg cctatactgc ccgtcagtac ataggttaca ctgaaggcgg
     3961 tgctgaaatg cagtgcggca aaagtcaagg ttttaagcat catcatctcc ctaattgaaa
     4021 tttacggata gatgataaag attatcataa ggctgcgcgg tttaaatttg ctatttgttg
     4081 ttagtgtaaa taaatcattt tttaaatggg gatagaaatt atgaatcata aaaagatcgt
     4141 tgttttggat gcggatactt tgcccggccg ggtttttcat tttgattttc cgcacgagct
     4201 cgcagtttac ggtacgacag gtgcggatga aacggcagaa cgggtgcacg acgcacatgt
     4261 tgtcattacc aataaggtaa tgatttccgc cgacattatt gcggctaatc cgcagttgga
     4321 gctgattgcc gtcagtgcga ccggtgtgaa caatgtcgat attggggcgg cggaggcggc
     4381 gggcgttgcg gtatgcaatg tccgcgccta cggaaacgaa tcggttgcgg aacacgcctt
     4441 tatgctgatg attgcgttaa tgcggaatct gcctgcctat cagcgtgatg ttgcggccgg
     4501 tttgtgggaa aagtcgccgt ttttctgcca ttacggcgcg ccgattcggg atttgaacgg
     4561 caaaacgctg gcggttttcg gacgcggcaa tatcggacgg acgcttgccg gatacgcgca
     4621 ggcattcggt atgggggtgg tgtttgccga acacaaacac gcgtccgctg tgcgcgaagg
     4681 ctatgtttcc tttgaagatg cggtacgggc tgctgatgtg ttgtcgctgc actgtccgct
     4741 aaacgcccaa actgaaaata tgataggcga aaacgaattg cggcagatga agcctggcgc
     4801 ggttttaatc aattgtgggc gcggcgggct ggtggatgaa aacgcgctgc ttgccgcact
     4861 caaatacggg cagatcggcg gggctggtgt cgatgttttg acggaggagc cgccaagggg
     4921 cggcaatccc ctgctgaatg cacgacttcc caatctgatt gttacgccgc ataccgcgtg
     4981 ggcaagtcgt gaggctttgg acaggctgtt tgatatattg ttggcgaaca ttcacgcctt
     5041 tgtgaaagga gaggcgcaaa accgcgtggt ttgagcttgt cgggatgacg gaaaacaatg
     5101 ccgtctgaac gcccaaaggg ttcagacggc attttttgag attcctgttt aaccgacttt
     5161 gtcgcccggc tgcgcgcctg tatccacatc taagagcttc agtttcccgt ctgccgtggc
     5221 ggcactcaaa atcatgcctt cggatacgcc gaattttgcc attttgcgcg gggcgaagtt
     5281 ggcgacggcg atgaccattc ttccgtttaa ctcggcaggg ttggggtaaa acgcggcgat
     5341 gccggagaag atgatacgtt tttcaaaacc gaaatcgagg tcgaatttca aaagtttggt
     5401 gctgccttcg acggcttcgc agttcaatac tttggcgacg cgcatatcga ttttcatgaa
     5461 gtcgtcgaaa cttgcctgtt cggcgacttt ttcgtatttg ccctcttcgg cggcaggtgc
     5521 ggctgcggcg gcgatgcttt gtttgttggc ttcgattaaa tcgtccactt gtttttgctc
     5581 cactcgttgc attaaatgtt tgtatttgtt gatggcgtgt ttgcccaagg tttcgcgtgt
     5641 atttgcccaa gtgatggctt ccaaattcag gaatttggcg gcgtttgcgg cggtttgcgg
     5701 caagacgggg gcgaggtagg cggtcaacat ggtgaaggcg ttgatgagct cgctgcacac
     5761 ttcgtgcagg cgttcgtctt gaccttcctg tttcgccagt tcccaaggtt tgttggcatc
     5821 aacgtattcg ttcacggcat ctgccaatgc catgatatcg cgcagggcgc gggcgtattc
     5881 gcggttttcg tattgctcgg cgatggtgtc gctttcggcg gcaagttttg ccagcaatgc
     5941 gctgtcggca acgtctttca gacggccttc aaagcgtttg gcgataaaac ctgaggcgcg
     6001 ggcggcgatg ttgacgtatt tgccgacgag gtcgctgttt acgcgcgaaa taaagtcttg
     6061 caggttcaaa tcgatgtctt cgattttgct gttgagtttt gcggcgatgt agtagcgcat
     6121 ccactcgggg tttaaacctt gttccagata ggatttggcg gtgataaacg tgccgcgcga
     6181 tttggacatt ttttgtccgt ctacggtcaa aaagccgtgt gcgtacacgc cggtcggggc
     6241 gcggtggccg gagaaatgca gcatggcagg ccagaacagg gcgtggaaat agaggatgtc
     6301 tttgccgatg aagtggtaca tctcggtttg gctgtcggct ttgaagtatt cgtcaaaatc
     6361 gacgccgatg cggtcgcaca ggtttttaaa cgacgccatg tagccgacgg gcgcgtccag
     6421 ccagacgtag aagtatttgc ccggcgcgtc ggggatttca aaaccgaaat acggcgcgtc
     6481 gcgggaaata tcccagtcgg acagggtggt ttcttcacct tcgcccagcc attctttcat
     6541 tttgttgagg gcttcggctt gcagatgggg cttgccgtcg tgcgggttgt tgccggaagt
     6601 ccatgctttg aggaagtcgg cgcattctcc cagtttgaag aagaagtgtt cggattcgcg
     6661 caattcgggt ttcgcgccgg aaacggcgga atacgggtta atcagttcgg tcggggaata
     6721 ggtcgtgccg cagacttcgc agttgtcgcc gtattggtct tgggcgtggc atttcgggca
     6781 ttcgccttta acgaagcggt cgggcaggaa catttgtttt tcggggtcga aaagctgctc
     6841 gatgacgcgg ctttcgattt tgccgttggc tttcagtgcg cggtaaatgt cttgggaaaa
     6901 ctgtttgttt tcaggggaat gggtgctgta ataattgtcg tagccgatga aaaaaccggt
     6961 aaagtcggcg aggtgttctt cgcgcacttt ggcaatcatg tcttcgggcg caatgccttg
     7021 tttttgcgcg gcaagcatca cgggcgtgcc gtgggtgtcg tcggcgcagc agtagtggca
     7081 ctcgtggccg cgcagttttt gaaagcgcac ccaaacgtcg gtttggatgt gttcgaccat
     7141 gtggccgagg tggatgctgc cgttggcata gggcagggcg gaggtaacga ggattttgcg
     7201 tgtcatattg tgctttgcaa acaatgggta aaggcggatt ataccgcaaa tcaaacgggg
     7261 aaatgccgtc tgaagcctga aaaatcgggc ttcagacggc atttttgcca accggcggga
     7321 tttattcgac ggttacggat ttcgccagat tgcgcggctt gtccacatca gtaccgcgtg
     7381 cgagggcgac atggtaggaa aggagctgca cggggatagt atgcacgacg ggggataatt
     7441 ctccgacatg gcgcggtgcg cggataacgt gcacgccttc ggtagcatta aaattgctgt
     7501 cgaggtcggc aaagacgaaa agttcgccgc cgcgcgcgcc gacttcctgc atattggctt
     7561 tgactttgtc caacaggctg tcgttgggcg cgatgacgac gacgggcatg ttttcgtcca
     7621 ctaaggcaag cggcccgtgc ttcagttcgc cggcaggata ggcttcggcg tggatgtagg
     7681 tgatttcctt cagttttaac gcgccttcga gggcaatcgg gtaatggatg ccgcgcccca
     7741 aaaacagcgc gctggttttc ttggcaaact gttgcgccca ggcggcaatt tgcggttcga
     7801 ggtttaaagc gtgctgcacg ctgccgggaa gctggcggag ttcttcggtg taacgtgctt
     7861 cgtcttcttc ggaaaccaaa ccgcgcactt tcgccagcgt taccgccaaa ccgaacagcg
     7921 caaccagctg cgtggtaaat gctttggttg aggcgacgcc gatttccgca ccggcacggg
     7981 tataaagcac gaggctgctt tcgcgcggca gggcggattc catcacgttg cagatggaga
     8041 ggctgtggcg gtgtcccaag gattttgcgt atttcaacgc ctccatcgtg tccagcgttt
     8101 cgccggattg ggaaatggta atgaccagtt ggtccggatc ggcaatcacg ctgcggtatc
     8161 ggtattcgct ggcgatttcg acatcggacg ggattttggc gatggattcc aaccaatatt
     8221 tggcggtcag cgcggcgtaa taggacgtgc cgcaggcaag gattttgacg ctgcggatgc
     8281 tttcaaacac gcttttggcg tttttgccga agttttcggg gatgaagccg ccgtcgagga
     8341 aaacttccgc cgtgtccgca atcgcgcgcg gctgctcgtg gatttccttt tgcataaagt
     8401 ggctgtacgg ccccagctcc aaagaggcga gcgagagttc ggataccttg actttgcgtt
     8461 cggcaggcag gccgttttta tcggtcagcc ttttgatgcc gtctgaagcc agcagcgcga
     8521 tgtcgccgtc ttcgaggtac gccacgcggc gcgtaaaggc gatgacggcg gatacgtccg
     8581 aagcgataaa ggtttcatcg tcgcccaaag cgaccaaaag cgggcagccc atacgcgcca
     8641 cgactaattc atcaggcttg tcttgggcaa taaccgcgat ggcgtatgcg ccgtggaaac
     8701 gtttgaccgc ttcctgcacg gcttcaaaca gcctgccgcc gttttgcgcg tattcgtgat
     8761 tgatgctgtg ggcgatgact tcggtatccg tttgcgattc aaaacggtat cccaaacctt
     8821 ccaagcgttt gcgttcgctt tcaaagtttt cgatgatgcc gttgtgcacg accgcaatca
     8881 taccgccgct gatgtgcggg tgggcgttcg gctcggtaac gccgccgtgt gtcgcccagc
     8941 gcgtatgccc gatgcccaaa ctgccgttca aatgcttttc acgcgccgca tcttccatta
     9001 actgcacgcg cccgacacgg cgcacgcgct tgatgttgcc gtcggtgttg acggcaatgc
     9061 ctgatgaatc ataaccccgg tattcgaggc gtttgagacc gtcggtcaga aaatcgacga
     9121 cattgtgatg ggcgcggatg gcgccgacga taccgcacat aactgttcct tagtatccgg
     9181 ttgaaaaaaa aacaggcgcg gacggctccc gtgccgcacc ttccgcttcg gattataaac
     9241 cgcctcccgc gccggaaaac agcaaaatgc cgtctgaagg cttgggcttg ctcaaaaaag
     9301 ggagggattt ccccgcctga ccgggatggg cgttcagacg gcattgcctg ctgccg
//
LOCUS       DAWGBY010000073         9328 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.073, whole genome shotgun sequence.
ACCESSION   DAWGBY010000073 DAWGBY010000000
VERSION     DAWGBY010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9328
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.073"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            226..1569
                     /locus_tag="WHG62_001426"
     CDS             226..1569
                     /locus_tag="WHG62_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ1725520.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAITQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1572..2804
                     /locus_tag="WHG62_001427"
     CDS             1572..2804
                     /locus_tag="WHG62_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ1725521.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2797..3573
                     /locus_tag="WHG62_001428"
     CDS             2797..3573
                     /locus_tag="WHG62_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ1725522.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKTEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            3573..4199
                     /locus_tag="WHG62_001429"
     CDS             3573..4199
                     /locus_tag="WHG62_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ1725523.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4203..4796
                     /gene="nqrE"
                     /locus_tag="WHG62_001430"
     CDS             4203..4796
                     /gene="nqrE"
                     /locus_tag="WHG62_001430"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ1725524.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4810..6027
                     /gene="nqrF"
                     /locus_tag="WHG62_001431"
     CDS             4810..6027
                     /gene="nqrF"
                     /locus_tag="WHG62_001431"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ1725525.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6180..7235
                     /locus_tag="WHG62_001432"
     CDS             6180..7235
                     /locus_tag="WHG62_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ1725526.1"
                     /translation="MPSETRLPNFIRTLIFALSFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPNSEISRFNQTTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            7261..7476
                     /gene="nqrM"
                     /locus_tag="WHG62_001433"
     CDS             7261..7476
                     /gene="nqrM"
                     /locus_tag="WHG62_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ1725527.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(7600..8178)
                     /gene="grpE"
                     /locus_tag="WHG62_001434"
     CDS             complement(7600..8178)
                     /gene="grpE"
                     /locus_tag="WHG62_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ1725528.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            8362..9180
                     /gene="cysE"
                     /locus_tag="WHG62_001435"
     CDS             8362..9180
                     /gene="cysE"
                     /locus_tag="WHG62_001435"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ1725529.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAAAAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
BASE COUNT         2254 a         2598 c         2313 g         2163 t
ORIGIN      
        1 agtacaaata gtacggcaag gcgaggcaac gccgtactgg tttaaattta atccactata
       61 aaaacggctt ccgcaaggaa aaaagcagca aatctgacaa acaggtacaa ttcctgatag
      121 aatctaacac tttgctacat taatttattc aatgcttttg atgccacgcg acacggtatc
      181 aaaacacgcc gtttttacct taaccatcac aagtaatgca aatatatgat taaaatcaaa
      241 aaaggtctaa acctgcccat cgcgggcaga ccggagcaag tcatttatga cggcccggcc
      301 attaccgaag tcgcgttgct tggcgaagaa tatgccggta tgcgcccctc gatgaaagtc
      361 aaggaaggcg atgccgtcaa aaaaggccaa gtgctgtttg aagacaaaaa gaatccgggc
      421 gtggtgttta ccgcgccggt ttcaggcaaa atcgccgcca tccatcgcgg cgaaaagcgc
      481 gtacttcagt cggtcgtgat tgccgttgaa ggcaacgacg aaatcgagtt cgaacgctac
      541 gcgcccgaag cgttggcaaa cttaagcggc gaagaagtgc gccgcaatct gatccaatcc
      601 ggtttgtgga ctgcgctgcg tacccgtccg ttcagcaaaa tccctgccgt cgatgccgag
      661 ccgttcgcca tcttcgtcaa tgcgatggac accaatccgc tggcggcaga ccctgtggtt
      721 gtgatcaaag aagccgccga ggatttcaga cgaggtttgc tggtattgag ccgtttgacc
      781 gagcgtaaaa tccatgtgtg taaggcagct ggcgcagacg tgccgtctga aaatgctgcc
      841 aacatcgaaa cacatgaatt cggcggcccg catccggccg gtttgagtgg cacgcacatt
      901 catttcattg agccggtcgg tgcaaacaaa accgtttgga ccatcaatta tcaagatgta
      961 attgccatcg gacgtttgtt tgcaacaggc cgtctgaaca ccgagcgcgt gattgctttg
     1021 ggtggttctc aagtcaacaa accacgcctc ttgcgtaccg ttttgggtgc gaaagtatcg
     1081 caaattactg cgggcgaatt ggttgacgca gacaaccgcg tgatttccgg ttcggtattg
     1141 aacggcgcga ttacacaagg cgcgcacgat tatttgggac gctaccacaa tcagatttcc
     1201 gttatcgaag aaggccgcag caaagagctg ttcggctggg ttgcgccgca gccggacaaa
     1261 tactccatca cgcgtacgac cctcggccat ttcctgaaaa acaaactctt caagttcacg
     1321 acagccgtca acggtggcga ccgcgccatg gtgccgattg gtacttacga gcgcgtaatg
     1381 ccgctagaca tcctgcctac cctgcttttg cgcgatttaa tcgtcggcga taccgacagc
     1441 gcgcaggcat tgggttgctt ggaattggac gaagaagacc tcgctttgtg cagcttcgtc
     1501 tgcccgggca aatacgaata cggcccgctg ttgcgtaagg tgctggaaac cattgagaag
     1561 gaaggctgat tatgggcttg aaacattttc tggaaaaaat cgaaccgcac ttcctgccgg
     1621 gcggcaaaca tgaaaaatgg tatgccctct acgaagctgc ggcgacgatt ttctatacat
     1681 ccggtgcggt aacgcgcaaa gcggcacacg tccgcgatgc gctcgactcc aaacgcatga
     1741 tgattttagt gtggctggct ttgttccctg ccatgttcta cggtatgtac aacgtcggcg
     1801 cacaggcatt cggtgcctta acgcccgatt tgctgcaaca aagcatcgcc aacgactggc
     1861 attacgccct tgccaacgct ttgggcatca atatgtcgtc tgaagcgggc gtgttgggca
     1921 aaatgctgtt cggcgcgatt tacttcctgc cgatttacgc gaccgtattt attgtcggcg
     1981 gtttctggga agttttgttc gccaccgtgc gcaaacatga aatcaacgaa ggtttctttg
     2041 ttacctcgat tctgtttgcc ttaatcgttc cgcccacgct gccgctgtgg caggcagctt
     2101 tgggtatttc tttcggcgtt gtggttgcga aagaagtatt cggcggtaca ggtaaaaact
     2161 tcatgaaccc tgcgctggca ggccgtgcct tcctgttctt cgcctaccct gccaacttga
     2221 gcggcgatgc ggtttggacg gcggttgacg gctattccgg cgcaaccgcg ctggcgcaat
     2281 gggcggcaca cggtgcagac ggcctgaaaa acgccgtaac cggtcaaacc atcacttgga
     2341 tggatgcgtt tatcggcaaa ctgcccggct ccatcggcga agtctccact ttggcactct
     2401 taatcggcgg cgcgtttatc gtgtttgccc gcatcgcttc ttggcgcatt attgccggcg
     2461 tgatgatcgg tatgattgcg atgtcttcgc tgttcaactt catcggttcg gacaccaacg
     2521 ccatgtttgc tatgccttgg tactggcatt tggtcgtcgg cggcttcgcc atcggtatgc
     2581 tgtttatggc gaccgaccct gtttccgctt cctttaccaa tgtcggcaaa tggtggtacg
     2641 gtgcgctgat cggtgtgatg tgcgtgttaa tccgcgtggt caatccggct taccccgaag
     2701 gcatgatgtt ggcgattctg tttgccaacc tgtttgcccc gattttcgac tatttcgtcg
     2761 cacaagcgaa catcaaacgc agaaaggcgc gcagcaatgg ctaagaaatt cgataaagac
     2821 agcttcagcg gcacgctgat tgtcgtgttg gcggtcagcc tgatttgctc ggtcatcgtt
     2881 gccggtgcgg tcgtcggctt gaaacccatc caagagaaac aaaaactcca agacaaacaa
     2941 ggctatatct tgagcgtagc cggtttgatg gataaggaca ccgacatcgg taaaaccttt
     3001 gccgagcgta tcgagcaacg tgttgtcgat ttggcgaccg gcgaatacgt cgccgatgcg
     3061 cctaaagact tcagcgcgcg catcgcaggc aaagaccctg cccaaagcat ccgcatcaaa
     3121 accgaagacg atttggcagg catcaaaagc cgtgccaaat acaccgaggt ttatttggta
     3181 aaaggcgaag acggcaaaat cgggcaaatc atcctgccta tgcacggcaa cggtttgtgg
     3241 tcggtcatgt acggctttgt cgccatccag cccgacggca acaccatcaa cggcattacc
     3301 tactacgaac aaggcgaaac cccgggcttg ggcggcgaaa tcggcaatcc gttgtggcag
     3361 caaaaattcg tcggcaaaaa actgtttgac ggacaaggca aactcgccct gcacgtcggc
     3421 aaaggcgcgg gttcggacaa agaacacggc gtagatgccc tctccggcgc atcgctgaca
     3481 tccaaaggcg tgcaaggttc gttcgcctac tggttcggcg aaaacggcta tatcccctac
     3541 ctgaacaaat tgaaatcagc aggagcgcaa taatggctga tatgaaacgc ttgaaacatt
     3601 tgatgttttc accctttatc gacaacaacc cgattgcctt gcaggttttg ggtatttgtt
     3661 cggctttggc ggttaccacc aaacttcaga cggccatcgt gatgggtatt tccgtagctt
     3721 tggtaaccgg tttttccagc ttcttcattt cgctggtacg caactacatc cccaacagca
     3781 tccgtattat cgtgcaaatg gcgattatcg cgtcgctggt tacgctggtc gaccaactct
     3841 tgcaggcatt tgcctacgaa ttgtccaaac agctttccgt attcgtcggt ctgattatta
     3901 ccaactgtat cgtgatgggc cgcgccgaag catttgcgat gaaagagccg ccgctggaaa
     3961 gcctgatcga cggcatcggc aacggcgcgg gctacgggat aatgctgctt gtcgtcgcca
     4021 ccgtccgcga actgattggc tcgggcaaac tcttgggcta caccgttttc caaaccgtgc
     4081 aggacggcgg ctggtatcag accaacggct tgttcctgct cgcccccagc gcgttcttca
     4141 tcatcggctt tttgatttgg ggactgcgta cctggaaacc cgaacaggcg gaggaataag
     4201 ctatggaaca ctatttgagc ctcttcatca aatccgtctt cattgaaaat atggcactat
     4261 ccttcttttt gggtatgtgc acgtttttgg cggtatccaa aaaagtatcc accgcattcg
     4321 gtttgggtgt ggcggtaatt ttcgtactcg ggctgtccgt ccctgtcaac caactcgttt
     4381 actcgctgct caaagacggc gcgattgtcg aaggcgtgga tttgaccttt ttgaaattca
     4441 tcaccttcat cggcgtgatt gccgctttgg tgcagatttt ggaaatgttc ttggataaat
     4501 tcgtccccgc cctctataac gcattgggca tctacctgcc gctgattacc gtgaactgcg
     4561 cgattttcgg cgccgtatcg tttatggcgc aacgcgaata caacttcggc gagtccgttg
     4621 tatacggctt cggcgcgggc ttgggctgga tgttggcgat tgtcgctttg gcgggcatta
     4681 ccgaaaaaat gaaatattcg gacgctccca aaggcctcaa aggcttgggc attaccttta
     4741 tcgccgccgg cctgatggcg atggcgttta tgtcgttctc tggcatccag ttataagaaa
     4801 gggatcggta tggagattat tttaggtatc gtgatgttta ccgtcatcgt tttggttttg
     4861 gcactgatga ttctgtttgc caaatccaaa ctggtcagcg aaggcgacat caccatcaaa
     4921 gtcaacggcg aaaaagagct gacgatgccc gccggcggca aactcttggg cgcgcttgcc
     4981 aacgaaggca tctttatccc ctccgcctgc ggcgggggcg gttcgtgcgg acaatgccgc
     5041 gtcgtcgtaa aaagcggcgg cggcgacatc ctgccgaccg agctgtccca catcagcaaa
     5101 cgcgaagcac gcgaaggctg ccgtctgtcg tgccaagtca acgtcaaaac cgacatggac
     5161 atcgaagtcc ccgaagaagt gttcggcgtg aaaaaatggg aatgcaccgt catctccaac
     5221 gataacaaag ccacgttcat taaagaactc aagcttgcca ttcccgaagg cgaagaagtc
     5281 cccttccgcg ccggcggcta cattcaaatt gaagctcctc ctcacactgt tgcctacaaa
     5341 gacttcgaca ttcctaagga atatcacgaa gactgggaca aatacaattt gtggcaatac
     5401 gtttccaaag tggacgagcc gattttgcgc gcctactcta tggcttcgta tcctgaagaa
     5461 aaaggcatca ttatgctgaa cgtgcgtatc gccacgccgc ccccgcgcgt acctgatgcg
     5521 cctccgggac aaatgtcgtc ctacatctgg tcgctcaaac ccggcgacaa agttacgatt
     5581 tccggcccgt tcggcgaatt tttcgccaaa gacaccgatg ccgaaatggt atttatcggc
     5641 ggcggtgcgg gtatggctcc gatgcgttcc cacattttcg accagttgaa acgtttgaac
     5701 tccaaacgta agattacctt ttggtacggc gcacgttcca aacgcgagat gttctatgtc
     5761 gaagacttcg accaactcgc agcagaattc ccgaacttca cgtggcacgt cgccctgtcc
     5821 gacccgctgc cggaagacaa ctgggacggc tacacgggct tcatccacaa cgtggtttac
     5881 gaaaaccatc tgaaaaacca cgaagcaccg gaagactgcg aattttatat gtgcggtccg
     5941 ccaatcatga accagtccgt gatcaaaatg ctcaaagact tgggcgtgga agacgaaaac
     6001 atcctcttgg atgatttcgg cggttgagta ttcggcttca aatacaaaag gaagaaacct
     6061 cggtttcttc ctttttctat gccgatgcca tccgaacacc cttcagacgg catcggcata
     6121 gaaacatacc ggccgttttg cgatataatt caaaccattt gccaaaaccg tcaaacacta
     6181 tgccgtctga aacacgcctg ccgaacttta tccgcacctt gatatttgcc ctgagtttta
     6241 tcttcctgaa cgcctgttcg gaacaaaccg cgcaaaccgt taccctgcaa ggtgaaacga
     6301 tgggcacgac ctataccgtc aaataccttt caaacaatcg ggacaaactc ccctcccctg
     6361 ccgaaataca aaagcgcatc gatgacgcgc ttaaagaagt caaccggcag atgtccacct
     6421 atcagcctaa ttccgaaatc agccggttca accaaaccac ggccggcaaa cccctccgca
     6481 tttcaagcga cttcgcacac gttactgccg aagctgtccg cctgaaccgc ctgacacacg
     6541 gcgcgctgga cgtaaccgtc ggccccttgg tcaacctttg gggattcggc cccgacaaat
     6601 ccgttacccg tgaaccgtcg ccggaacaaa tcaaacaggc ggcatcttat acgggcatag
     6661 acaaaatcat tttgaaacaa ggcaaagatt acgcttcctt gagcaaaacc caccccaagg
     6721 cctatttgga tttatcttcg attgccaaag gcttcggcgt tgataaagtt gcgggcgaac
     6781 tggaaaaata cggcattcaa aattatctgg tcgaaatcgg cggcgagttg cacggcaaag
     6841 gcaaaaacgc gcgcggcgaa ccgtggcgca tcggtatcga gcagcccaat atcgtccaag
     6901 gcggcaatac gcagattatc gtcccgctga acaaccgttc gcttgccact tccggcgatt
     6961 accgtatttt ccacgtcgat aaaaacggca aacgcctctc ccatatcatt aatccgaaca
     7021 acaaacgacc catcagccac aacctcgcct ccatcagcgt ggtcgcagac agtgcgatga
     7081 cggcggacgg cttgtccaca ggattattcg tattgggcga aaccgaagcc ttaaagctgg
     7141 cagagcgcga aaaactcgct gttttcctga ttgtcaggga taaaggcggc taccgcaccg
     7201 ccatgtcttc cgaatttgaa aaactgctcc gctaaacata caaaccgatt aggaaacacc
     7261 atgaaaaccc tgctccttac cttcggcatc ttcctgaccg tcatcatcgg tatggcggtc
     7321 ggctatattt tctccaaacg cagcatcaaa ggcagttgcg gcggcattac tgccttgggt
     7381 atgaaaaaaa tgtgcgactg cgacacacct tgcgacaccc tgcaaaagaa actggatgaa
     7441 gaaaaacagg caggcggcat acgggttgac cgttaacgcc gaaacaaaat gccgtctgaa
     7501 gcccgacagg cgggttcaga cggcattgcc gctttacttc gatcggttta tacgcaaaac
     7561 gcgcttcagg aaataaatca gattattccc cagacgcctt caggcttcct tctgtgccac
     7621 cgtaaccata gccgggcgca acacgcggtc ggacagcgta taacccttct tcatcacgcc
     7681 caccacggta ttgggttcct gttcgcttgc caccgcctgc atcgcctgat ggatattcgg
     7741 atcgagctta tcgcccgctt taggattgat ttccttgatt tgcgtagcat caaatgcttt
     7801 ctgcaactcg ttcaaagtca tctgcacgcc cattttcagc gcatcgaaat tgccgctctg
     7861 atccaaaagc gccatttcca gataatcctt gaccggcagc atttccacgg caaacttctg
     7921 tccggcgaac ttgtgcgtat ccgcaatttc ctgctgatgg cggcggcgca ggttttgctc
     7981 gtttgccaaa gcgcgcagct gctcgtcttt caactgcgct tccagctcgg caatccgcgc
     8041 ctgcaaatcc tcataagccg gctctgcggc agcctgttcc tgcacaccgt ccgcatttcc
     8101 tactgtctcg acggtttcca ccgcctccac attttcaacc gcttcttcac tgttttgctg
     8161 ctgtgtctgt tcgctcatat cgtatccctt aaaacaaatt ggaaatcaaa atccagttat
     8221 tacccgcgca agataaggac attttcaaga aacttcaagc aaaggcagag aatttcaaat
     8281 tcattttcaa atcccctacc gaaaaaataa tatagacggt aagatactgc cgaccatatc
     8341 gattttcaaa cgtcatcact catgaaaaaa gaccatttaa acacaaccgg tttcgacctc
     8401 tggcacacca tccgcgaaga aaccgccgcc gccgcggccg ccgaaccgat gctggcaagt
     8461 tttttgcacc aaaccgtgtt gcgccacgaa tccctcggct ccgtccttgc ctaccacctt
     8521 tccagcaaac tcggcagccc gattatggac gtgcgcgcac tgtttgaaat ctaccagcag
     8581 gcgttgggca gcgacaccca aatcggcaaa tgcgtcgaag cagacttaaa agccatctac
     8641 gaacgcgatc ccgcctgcga cgaatattcg ctgccgcttt tatatttcaa aggcttccac
     8701 gcgattcagg cacaccgcat caaccatcgg ctgtatctcg acgggcgcaa aacgctggcg
     8761 tatttcctgc aaaaccgtat gtccgaagta ttcggcgtgg acatccatcc cgccgcccgt
     8821 ttcggatacg ggctgatgct cgaccacgcc accggctttg ttgccggcga aaccgccgtg
     8881 ttgggcaaca atatttcgat tttgcacggc gtaacgctcg gcggttcggg caaagaaggc
     8941 ggcgaccgcc accctaaaat cggcgacggc gtgatgatcg gcgcaaacgc ctcgatattg
     9001 ggcaatatcc gcatcggcag caatgccaaa atcggggcgg gcagcgtcgt ggtttcagac
     9061 gtgccgccgt ccatcacggt tgtcggcgta cccgccaaac ccgtggcgcg atcgctcaaa
     9121 acaccgtcgg cggatatgga tcaaaatatc cagtttaccg aaatcgactt tatgatttga
     9181 atatccgcac caatgccgtc tgaaacgcca aacgggcttc agacgacatt gcccgcttca
     9241 agcctgcgcc ttgatatgcc gccgatgtcg gcacttgcca gtcggacaaa atgcctttta
     9301 ttcgatacac ccgattccca cgcaaccg
//
LOCUS       DAWGBY010000074         9289 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.074, whole genome shotgun sequence.
ACCESSION   DAWGBY010000074 DAWGBY010000000
VERSION     DAWGBY010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9289
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.074"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            134..343
                     /locus_tag="WHG62_001436"
     CDS             134..343
                     /locus_tag="WHG62_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ1725530.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            432..1646
                     /locus_tag="WHG62_001437"
     CDS             432..1646
                     /locus_tag="WHG62_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ1725531.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKSYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVSQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1733..4312)
                     /gene="clpB"
                     /locus_tag="WHG62_001438"
     CDS             complement(1733..4312)
                     /gene="clpB"
                     /locus_tag="WHG62_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ1725532.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHSGVNVPQVKQRLQQHLSSLPKVSSQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4573..5583
                     /gene="trpS"
                     /locus_tag="WHG62_001439"
     CDS             4573..5583
                     /gene="trpS"
                     /locus_tag="WHG62_001439"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ1725533.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5589..5930
                     /locus_tag="WHG62_001440"
     CDS             5589..5930
                     /locus_tag="WHG62_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725534.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6249..6614
                     /locus_tag="WHG62_001441"
     CDS             6249..6614
                     /locus_tag="WHG62_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725535.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAKEAVTEAKEAVTEAAKDTL
                     NKAADATQEAADKMKDAAK"
     gene            complement(6823..8331)
                     /gene="ppx"
                     /locus_tag="WHG62_001442"
     CDS             complement(6823..8331)
                     /gene="ppx"
                     /locus_tag="WHG62_001442"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ1725536.1"
                     /translation="MTTHPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(8448..9179)
                     /locus_tag="WHG62_001443"
     CDS             complement(8448..9179)
                     /locus_tag="WHG62_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ1725537.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQSLRLSFGYKNR
                     SVTRSFGIVPFVEQNLLGGSRYNFVGGFNADFSQRLSERWRLTLNAGNMWKHYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHNITKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTIVYRFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNMQIFMSVEKDFK"
BASE COUNT         2128 a         2422 c         2444 g         2295 t
ORIGIN      
        1 tgcggcttcg tcgccttgtc ctgatttttg ttaatccgct atatcgattt gaatttttca
       61 gaaaatgaag cggacgtttg ggcggaggca acttgtttga taagatagca atatttcaaa
      121 acggagaaag atcatgcctt atgtcaatat taaagtaacc ggcggcaagg aagcaccgac
      181 tgccgcgcaa aaagcggaac tgatcggcgg cgtaaccgaa ttgctggcac gcgtgctggg
      241 caaaaatccc gaaacaacgg ttgtcgtgat tgatgaagtg gataccgata actggggaat
      301 aggcggcaaa agcgtcagcg aacggcgcaa agagggcagg taaaaagcct gaaaatctcg
      361 gtttgatgct ttaaattccg cgtgaaaaag agtacattcc cacccattgc ccaaaattta
      421 cggaacacat catggataaa tttcccaagt ctgcaaagct cgatcacgtc tgttacgaca
      481 tacgcgggcc ggttcacaaa aaagcccttc agttggaaga ggagggcaat aaaatcctta
      541 aactcaatat cggcaaccct gcgccgttcg gctttgaagc ccctgatgaa atcttggtcg
      601 atgtcatccg caacctgccg acttcgcaag gctattgcga ttctaaaggg ctgtattccg
      661 cccgcaaagc cattgttcac tactatcaga ccaaaggttt gcgcgatatt acggttgatg
      721 atgtctatat cggcaacggc gtgtccgagc tgattacgat gtctatgcag gcattgctca
      781 acgacggcga cgaaatcctg attcccgcgc ccgactaccc tttgtggacg gcggcggcaa
      841 cgcttgcggg cggtacggta cgccattatc tgtgcgacga agaaaacggc tggttcccca
      901 accttgccga tatggaagcc aaaatcacgc ccaaaaccaa agccatcgtc gtcatcaatc
      961 ccaataatcc gacaggcgcg gtgtacagca gggaaatcct gttggaaatc gccgaactgg
     1021 cgcgcaagca cggtttgatt attttcgccg acgagattta cgataaaatc ctttatgacg
     1081 gcgcggttca ccaccacatc gccgcgcttg cccccgacct tttgacggta acgttcaacg
     1141 gtttgtccaa atcctaccgc gtcgccggct tccgccaagg ctggatggtg ctcaacgggc
     1201 cgaaacatca cgcaaaaggt tacatcgagg gtttggatat gctctcgtct atgcgcctgt
     1261 gtgccaatac gccgatgcag cacgcgattc agacggcatt gggcggctat cagagcatca
     1321 acgaatttat tttgcccggc gggcggcttt tggaacagcg caacagggcg tgggaactgg
     1381 tcagccaaat ccccggcgtg tcctgcgtca aaccgatggg cgcgatgtat atgttcccaa
     1441 aaatcgatac cgaaatgtac cgtatccacg atgacatgaa attcgtttac gatttgctgg
     1501 tgcgcgaaaa agtcttgctg gtacagggaa cggggtttaa ttggattaaa cctgaccatt
     1561 tccgcattgt cacgctgcct tacgtccatc agattgaaga ggcgatgggc aggttggcaa
     1621 gattcctgca aacctaccgc caataagggg acggtttgtc tgccgaggat aaaaaatgcc
     1681 gtctgaaacg gagattcccg tttcagacgg cattttcaac agcaggaacg aatcaggcaa
     1741 atttcagtct gtcgccgtcg gcttctaccc tgatttcgct ttcgggcgca tagtttccgg
     1801 caagcagggc ttttgccagc gggttttcga tttccgactg gatggcgcgt ttgagcggac
     1861 gtgcgccgta aatcgggtcg aaaccggctt tggcgatgat gtccagtgcg gcatcggaaa
     1921 cagtcaggcg caggttttgt ttttccaaac gtttttccaa acctttgagc tggattttcg
     1981 caatgctgcg gatgtttgcc tgatccaaac cgtggaacac gaccacttcg tcgatgcggt
     2041 tgatcatttc aggacggaaa tgttctttca catcctccat cacaacttct tttaccgctt
     2101 cgtaatcctg aatgcccatt tgttggatgt gctggctgcc gatgttggaa gtcatcacaa
     2161 tcacggtatt tttaaaatct accgtcctgc cttgcccgtc ggtcaaacga ccgtcatcca
     2221 atacttgcag caggatgttg aacacatcgg gatgggcttt ttccacttcg tccagcagaa
     2281 tcacgctgta cggtttgcgg cgcacttgtt cggtcaggta gccgccttct tcgtagccga
     2341 catagcccgg aggcgcaccg atcaggcgtg caacggcgtg tttttccata tattcggaca
     2401 tatcgatgcg aatcagatga tcttcgctgt cgaacagaaa gcctgccagg gctttacaca
     2461 actcggtttt acccacgccg gtcgggccca agaacaggaa gctgccgtaa ggcttgttcg
     2521 gatcggcaag accggagcgg ctgcggcgga tagcgtcgga cacggcacgc acggcttcgt
     2581 cctgtccgac cacgcggcgg tgcaatactt cttccatttt cagcagtttg tcgcgttcgc
     2641 cttccatcat tttggatacg ggaatgccgg tcatacggga aaccacctct gcgatttcct
     2701 ctgcgccgac attattacgc aagagtttgt ttgccggttt tgtgctgtcc gtatctgccc
     2761 gttcggcggc tgcacgctgt ttttccaaat gctccaaatc ttcatacatc aattttgaag
     2821 ccagtgccaa atcgccttgc cgttttgcct gttcgatttt aattttgact tcgtcaattt
     2881 gtttcttaat attagcagca ccgtctgaaa ttgctttttc ggctttccag atttcgtcta
     2941 aatcggcgta ttctttttgc agaccgttga tttcctcgtc tatcagttcc aaacgttttt
     3001 tgctggcatc gtctttttct ttttcaacgt gcgccttttc catccgaagc tgaattagac
     3061 ggcggtcgat tttgtccatt gcttccggct tggtttcttt ttccatcttg acacggctgg
     3121 cggcttcgtc aatcaaatca atcgctttat caggcaggaa gcggtcggta atgtagcggt
     3181 cgctcaactc cgctgcggca acgatagcag ggtcggtaat atcgataccg tggtggattt
     3241 cataacgctc ctgtaaaccg cgcaagatag cgatggtgtc ttctacactt ggctcgccaa
     3301 ccaatacttt ttggaagcgg cgttcgagtg ccgcgtcttt ttcgatgtat tggcggtatt
     3361 cgtccaaggt ggtcgcgccg atacagtgca attcgccacg tgccaaagcc ggtttcagca
     3421 tattgcccgc atccatcgca ccgtcggttt tgcctgcgcc gaccaaagta tggatttcgt
     3481 cgatgaaaat cagagtgttg ccgtcgtctt tcgccaagtc gttcaacacg cctttcaagc
     3541 gttcttcaaa ttcgccgcgg tatttcgcgc cggcaatcaa tgccgccaag tccaaaacca
     3601 gtaggcgttt gttgcgcagg gattcgggta cttcgccgtt gacgatgcgt tgtgccaaac
     3661 cttcgacgat ggcggtttta cccacgcccg gttcgccaat cagcacaggg ttgtttttgg
     3721 tacggcgttg caatacctga atcgcacggc ggatttcgtc gtcacggccg ataacggggt
     3781 cgagcttacc gtctcgggcg cgttgggtca gatcgagcgt atattttttc aaagcatcgc
     3841 gttggtcttc ggcattggca tcgttcacgt tttgtcctcc tcgtaccgca tcgattgcgg
     3901 cattgatgtt ttgttcggtc gcgccggctt ctttcaaaat tttgccggcc gcatcgttct
     3961 gctgcaccaa ggcaagcagg aaaagttcac tggcgatata ggcatcgccg cgtttggttg
     4021 cggctttgtc catcaggttc aacaccgcct gcaattcgcg gctgggcaga atgtcgccgc
     4081 cctggctgga cactttcggc aggctgctca aatgctgctg caaacgctgt ttcacctgcg
     4141 gcacgttcac gcccgaatgc gccagcaacg cggcggctcc gctgttttgg tcgtcaagca
     4201 gggcttttaa cacaaagcct gcttccagat agctgccgtc cgcagccaac gccaaactct
     4261 gagcttctgc aagggcttgt tggaatttgg cggttaattt gtcgtatcgc atttttgttt
     4321 ccttttcaaa atgtccgctg tcgaagccta tatgtgcata attgtggata actcaagttc
     4381 tgttttctgt ttttctatat ttaattcgat atatcattga atttaaagta tataaaaatg
     4441 tataataatg tgtataacta tatcttctta atatggaaaa gtctgttgtc ggctggatgt
     4501 aggtggcaaa tcgggtataa tcggcgcatc tttttccctt tcagacggca ttgatgccgc
     4561 aaggacattt ttatgagcaa aaaacgagtt ctgaccggcg taaccaccac cggcatcccg
     4621 catctgggca actacgtcgg tgctatccgc cccgccgtcc gcgcggcgca aaaccctgat
     4681 accgaatcct tcctcttcct cgccgattac cacggtatca tcaaatgcca cgagccggag
     4741 atgattcacc aatccaccca agccgttgcc gccacttggc ttgcctgcgg actcgacccc
     4801 gagcgcacca ccttctaccg ccaaagcgac attcccgaag tgatggaatt gaactggatt
     4861 ctgacctgca tcaccgccaa gggtttgatg aaccgcgccc acgcctacaa agccgccgtg
     4921 caggcaaatg cggaaaacgg gcaggaagac cccgatttcg gcgtggaaat gggtttgttc
     4981 agctatccga ttctgatgac cgccgacatc cttatgttca acgccaacga agtgcccgtc
     5041 gggcgcgacc aaatccaaca cgtcgaaatg gcgcgcgaca tcgccggccg cttcaatcac
     5101 cgcttccgag aactcttcac cctgcccgaa gtgaaaatcg acgaaaacgt cgaactcttg
     5161 gtcggtttgg acggacgcaa aatgtccaaa tcctacggca acaccattcc gctttgggaa
     5221 aacgacaaaa aaacccaaaa atcggtcaac aaaatcatca ccaatatgaa agagccgggc
     5281 gagccgaaac agcccgacga aagcccattg tttgaaatct acaaagcctt ctccacgccg
     5341 tctgaaaccg cagcgttcac gcaaatgctt gccgaaggct tggcttgggg cgaggcaaaa
     5401 aaacttttgg cggcgaaaat caacgccgaa ctcgccgaac cgcgcgaacg ctacaacgag
     5461 ctgaccgccg acccttcgca aatcgaagag attttgcagg caggcgcgca aaaagcgcgt
     5521 aaagaagcac gcgaattgtt ggacaaagta cgcgatgcgg tcggcatccg cccgttgaaa
     5581 taaacccgat gccgtccgaa cctcttaaag gcttgccgga acaaaacgtc gtccggctga
     5641 ccggcaagca tcccaacgac ttggaagccg tcagcggcaa atgcatggaa accgacgata
     5701 agggcggtcc ggtaggctgg gcggaaaacg gcgtgtgcca taccttgttt gccaaactgg
     5761 tgggcaatat cgccgaagac ggcggcaaac tgacggatta cctgatttcg cattccgccc
     5821 tgcaacccta tcaggcaggc aaaagcggct atgccgccgt gcagaacgga cgctatgtgc
     5881 tggaaatcga cagcgagggg gcgttttatt tccgccgccg ccattattga ggtattcgga
     5941 catcccggaa tatatttggg tttttcaaac cttgcgaaaa aagtccgcac cgccgggaaa
     6001 ctcaaaagga gggggatatg tgttacaatt ttccgaactg ttttcataaa atagttttcg
     6061 gacgtgtttc aatatggcat tgatgccgcc ttattgttcg agaaaaaaac ctttatattt
     6121 aaatataatg ggttttaact aaacgggaaa ccgttttctc tccggccgat gggcaaaatc
     6181 agccgattga tggaacacgg ttcgattttt aagcaaaacc ttaatcaaca actcaagaag
     6241 gataagacat gaaaaaatta ttgattgccg caatgatggc ggctgccttg gcagcttgtt
     6301 cgcaagaagc caaacaggag gttaaggaag cggttcaagc cgttgagtcc gatgttaaag
     6361 acactgcggc ttctgccgcc gagtctgccg cttctgccgt cgaagaagcg aaagaccaag
     6421 tcaaagatgc tgcggctgat gcaaaggcaa gtgccgagga agctgtaact gaagccaaag
     6481 aagctgtaac tgaagccaaa gaagctgtaa ctgaagccaa agaagctgta actgaagcag
     6541 ctaaagatac tttgaacaaa gctgccgacg cgactcagga agcggcagac aaaatgaaag
     6601 atgccgccaa ataatttgtt gccttggcaa aaatgatggg atgccgcctg ccggcaaccc
     6661 aaacgaaacc gcctgaagat tttcaggcgg tttttgagtt gtatgcccct tgttttttac
     6721 gcctgcatga ccgttccgag cagatgtgcc gcgcatatcg ggatgttgcg gacagggaaa
     6781 tgccgtctga acatcattca gacggcattt gccccgcaag gttcagacgg cctcgacttt
     6841 gaacggcata ttgatttttt gccattggac gctttcatat tccaatgcgt cggcaatcag
     6901 gggatggcgt tccagccatt ccctgtcaat acgcaggatg aagccgcagc tttccgtgtc
     6961 cgtacgcaac tgcatatttt tcgggaaaga caggtcttgg cgcgaacggc agaacagtgc
     7021 ggcaaggcgc agcgacaaaa cggcatacca caacatttcg ttggtgccga tgatgccgct
     7081 catttttttc atatcgccgc gatgaccgat gaccagttgg gcaagtatgg tctgttcttt
     7141 gcgtgagaaa cccggcatat cggcgttttc gaggatgtag gcggaatgct tgtgatagcc
     7201 ggtgtgggcg atgtccaaac cgatttcgtg cagcgcggcg gcgcgtccga gatactgttg
     7261 ccacaaggca agctcttgaa ccgtaacatt tttagcgtgg cagaggctgt ccataaaggt
     7321 ttgcgcggtc tcggcggtgc gtttcgcctg attgaggctg acgtggtagc ggtgttggaa
     7381 ctcggcaacc gtttgtccgc gcatatcttc gtttaaaccg cgcccgatca aatcgtaaaa
     7441 cacgccgtcg cgcagggcgg cttcggttac ggtcatcctg tcgagtttca tttcttcaaa
     7501 cgccgccatc atcacggcaa gtccgccggc aaaaacttcg atgcgttccg gtttcaggtt
     7561 ttcaaatttg gcctttttga ccgaaccggc ttcgatgatg cgttcggcga gggcgcgcat
     7621 gcctttgtag gtaatgtccg cctcttgggg catttcggcg gcaagcacgt cgcggatgga
     7681 ttttgccgaa cccgatgtgc cgacggcgaa atcccaacct tcgcgcctca tatttttgct
     7741 gatgcgctgg atttcgttgc gggcggcgga aatggcagat tggaagtctt tggcggtgat
     7801 tttgttttgg aagaagcgca ggctgtaggt tacgcagccc aagggcaggc tttcggtaat
     7861 gtcgggattc agcgtcgagc cgatgacaaa ttctgtcgaa ccgcccccga tgtcgataac
     7921 cagcattttg ccgccgcccg gggggagggt gtggatcacg ccggtataaa tcagccgcgc
     7981 ctcttcgcgc cctgcgatga tttcgatggg gaaacccagt gccgcttcgg ccttgggaag
     8041 gaaatctgcg atgtttttgg cgacgcggaa tgtattggtt gccacggcgc gtacctgttc
     8101 agggcggaag ccgcgcaggc gttcgccgaa ttttgccaga cagtccaaag cctgttcttg
     8161 ggaagcggca ctcaggtttt tctgttcgtc cagtccggcg gcgaagcgca ccatctgttt
     8221 gaacgaatcg atgactttca actgtccgtt gttgttttcg caaatctgga ggcggaaact
     8281 gttggaaccc aaatcgacgg aggcgaggac gtttgcggga tgggtggtca tggcggatac
     8341 cggtggggga aaaacgcaat gttactctga cggcgcgggc gttgacaata aatgatgagg
     8401 ttgtttttga ttctgcccac ggatgttgcc gacggcattt tttgcgctta tttgaaatcc
     8461 ttttccacgc tcatgaaaat ctgcatgttt ttgcgtgtgt aaaaactttt catattgctg
     8521 tcgattttca gatagcggaa attgagttgc ggcgtaaatc ccttccaaga gattttgtcg
     8581 tgccacaacg acaggtttgc ctgatattcg tggtctttac gcgggaagcg gtacacaatg
     8641 gtcccgggtg catcaaacgt cctgcgggta tagcgcaggt ttgcccgcag acccagcccg
     8701 ccgtcgaacg ttttgaccgc gccgacacgc aaacccttgc ggatggaagc ctgttccgcc
     8761 tctttcgtta tgttgtgcga ccagtccgca ccgccgtaaa gcagccagtc tttcggcgcg
     8821 gaatacatca gcgtcgcgcc cgccagcggc atatggctgt cgtatcgggc ggcggtgcgg
     8881 tcttcctgat aatgcttcca catattgccc gcgtttagtg tcaaccgcca gcgttcgctc
     8941 aagcgttggg agaaatcggc attgaagccg ccgacgaaat tgtatcggct gccgcctaag
     9001 aggttttgct cgacaaacgg cacgatgccg aacgagcgcg ttaccgaacg gtttttatag
     9061 ccgaacgaca ggcgcaggct ctgttcgctg aaatctttgt tatcccaata atgcacgccg
     9121 ccgccgctga tgccgccgta gaggaaatga tgcccgcccg cattgatttc gcgcgacacg
     9181 cctaagccct agcgcaaacc gtgtgccttt tgcggcaggc tgtcggcggt tttcgtccag
     9241 cttctgcccg caaattcaat cgtttttttg gacgaagcgt tgtttatag
//
LOCUS       DAWGBY010000075         9099 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.075, whole genome shotgun sequence.
ACCESSION   DAWGBY010000075 DAWGBY010000000
VERSION     DAWGBY010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9099
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.075"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..1938
                     /locus_tag="WHG62_001444"
     CDS             <1..1938
                     /locus_tag="WHG62_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ1725538.1"
                     /translation="ISPEIFGTLFQSVMDAQERREAGAHYTETANIDKVINGLFLENL
                     RAEFEAVKAFKRDKAKKLAAFYQKIQNLQFLDPACGCGNFLIVAYDRIRALEDDIIAE
                     ALKDKAGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDGEV
                     ACHTLPLEDAAEIIHANSLRTPWQAADYIFGDPPFIGSTYQTKEQKNDLESICGHIKG
                     YGLLDYVCNWYVKAAGIMAQHPQVQTAFVSTNSICQGQQVEILWGSLLKQDIEIHFAH
                     RTFQWTSQAAGKAAVHCIIVGFRQKPQMPSEKTLYDYPDIKGEPVKHAAANINPYLID
                     APDVIIAKRSRPVHCEPDMVNGSKPTEGGNLILSTDEKEALIAAEPLAEQYIRPFVGA
                     EEFINGKTRWCLWFHGVSDVKRNHDLKQMPQVQARIQAVKTMREASSDKQTQKDAATP
                     WLFQKIRQPSDGNFLIIPRVSSESRRFVPIGYLSYETVVSDLVFTLPNASLYHFGILS
                     STMHNAFMRTVAGRLESRYRYSNTVVYNNFPFPESCRMPSENDRQDPLRAAVETAAQA
                     VLDARGQYRREAREAGLPEPTLAELYAPDAGYTALDKAHAALDKAVDKAYGYKTGKNT
                     DDEAERTAFLFELYRKAAAIA"
     gene            complement(2729..3412)
                     /locus_tag="WHG62_001445"
     CDS             complement(2729..3412)
                     /locus_tag="WHG62_001445"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ1725539.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVVPDGENLQVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            3708..6011
                     /gene="parC"
                     /locus_tag="WHG62_001446"
     CDS             3708..6011
                     /gene="parC"
                     /locus_tag="WHG62_001446"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ1725540.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRARHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATSQNR
                     AIAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEAEILIESEGRRGAAHKDRIPI
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            6032..7549
                     /locus_tag="WHG62_001447"
     CDS             6032..7549
                     /locus_tag="WHG62_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEZ1725541.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYVWLAISCWMIFFSTLNPQWQWQALKIPSFSAVSDITMIGILTYLF
                     GGINSGFGILILPFVGSSCLLSYGRYPLLYASYAAILLILNALADSNINMYPLILGAK
                     TVTNTFVLVTGSYFVAMIASLSVRYIDRAGKLAHENHAAYRRIRGLNQIVLNRVQEAV
                     VIINVEYQTVLFNKKAKDLLPTLEIGQHTALFDPITVLWDKAPSRTFERNIDTPALTA
                     RIRAVPMNKEQNKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHA
                     NDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTERETIGLIPFW
                     EEFKQEFLLGHPDAAGCIRLDMQGNHLTAYFDPAHLRQIMWNLANNAWRHSRKQPGSI
                     SVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWHMPTSAI"
     gene            7601..8068
                     /locus_tag="WHG62_001448"
     CDS             7601..8068
                     /locus_tag="WHG62_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HEZ1725542.1"
                     /translation="MTELQHPVLVVDNETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            8172..8924
                     /locus_tag="WHG62_001449"
     CDS             8172..8924
                     /locus_tag="WHG62_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ1725543.1"
                     /translation="MTDILIDNTATEAVRALIQAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         2259 a         2845 c         2198 g         1797 t
ORIGIN      
        1 atcagtcccg aaatcttcgg cacgctcttc caatcagtca tggacgcaca agagcggcgc
       61 gaagcgggcg cacactacac cgaaaccgcc aacatcgaca aagtcatcaa cggccttttt
      121 ttagaaaacc tgcgcgccga atttgaagcc gtcaaagcct tcaaacgcga caaagccaaa
      181 aagctcgccg ccttctacca aaaaatccaa aacctgcaat tcctcgaccc ggcctgcggc
      241 tgcggcaact tccttatcgt cgcctacgac cgcatccgcg cccttgaaga cgacatcatc
      301 gccgaagccc tcaaagacaa agcaggcggc ctgttcgaca gcccgtccgt ccaatgccgt
      361 ctgaaacagt ttcacggcat cgaaatagac gaatttgccg tcctcatcgc ccgcaccgcc
      421 atgtggctca aaaaccacca atgcaacatc cgcacgcaaa tccgcttcga cggcgaagtc
      481 gcctgccata cgctgccgct cgaagacgcc gccgaaatca tccacgccaa cagcctccgc
      541 acaccttggc aggcggcgga ctacatcttc ggcgatccgc cctttatcgg ctcgacctac
      601 caaaccaaag agcagaaaaa cgacctcgaa agcatctgcg gccatatcaa aggctacggc
      661 ctgttggatt acgtctgcaa ctggtatgtc aaagccgccg gtatcatggc gcagcatccc
      721 caagttcaga cggcatttgt ttccaccaat tccatctgcc aaggccagca ggtcgaaatc
      781 ctttggggca gccttttgaa gcaagacatc gaaatccact ttgcccaccg cacctttcaa
      841 tggacgagcc aagccgcagg caaagccgcc gtccactgca tcatcgtcgg cttccgccaa
      901 aagccgcaaa tgccgtctga aaaaaccctc tacgactatc ccgacatcaa aggcgaaccc
      961 gtaaaacacg ccgcggccaa catcaatccg tatctgattg acgcgcccga tgtgattatt
     1021 gccaagcgca gccgtcccgt acattgcgaa cctgacatgg tcaacggaag caaaccgacc
     1081 gaaggcggca accttatcct ttcaaccgat gaaaaagaag ccctgattgc cgccgaaccc
     1141 ttggcggaac aatacatccg tccctttgtc ggcgcagagg aatttatcaa cggcaaaacc
     1201 cgttggtgcc tgtggtttca cggcgtatcc gacgttaaac gcaaccacga cctgaaacag
     1261 atgccccaag ttcaagcccg tattcaggca gtcaaaacca tgcgcgaagc cagcagcgac
     1321 aaacaaactc aaaaagatgc agcaaccccg tggctttttc aaaaaatccg ccagccttca
     1381 gacggcaatt ttctgattat cccacgcgtc tcatccgaaa gccgccgttt cgtccccatc
     1441 ggttatctat catatgaaac agttgtcagc gatttggtat ttacccttcc aaacgccagc
     1501 ctctaccact tcggcatcct cagctccacc atgcacaacg cctttatgcg taccgttgcc
     1561 ggccgtctgg aaagtcgtta ccgctattcc aataccgttg tgtacaacaa cttccccttc
     1621 cccgaaagct gccggatgcc gtctgaaaac gaccgccaag acccgctccg cgccgccgtc
     1681 gaaaccgccg cccaagccgt cctcgacgcg cgcggacaat accgccgaga agcgcgggaa
     1741 gccggtttgc ccgagccgac cctcgccgaa ctctatgcgc ccgacgcagg ctataccgcc
     1801 ctagacaaag cccacgccgc cctcgacaag gcagtcgata aagcctacgg ctacaaaaca
     1861 ggcaaaaaca ccgacgacga agccgaacgc accgccttcc tgttcgagct gtaccgcaag
     1921 gcggcggcaa ttgcgtagta gttgcgtagg atagttgcgt agggtgggct tcagcccacc
     1981 aactcccacc aactcccacc atcttcaccc taaaaccccg tcatctccgc aaaagcaatt
     2041 gcgtagggtg ggcttcagcc caccgttttt cttcattttc ggttgttgat tggcaggctg
     2101 aagcccaccc tgcggttaca aaaatcccgt cattcccgcg caggcgggaa tccagacctt
     2161 tcggggcgga aacttatcgg ataaaacgat ttcccctgca tcctggattc ccactttcat
     2221 gggaatgacg ggatataggt ttccctacgg acgtgttcag attcccgcct tcgcgggaat
     2281 gacggcggag aagtttctgt ctttccgata acttaccgta acttaaaatc ccgtcattac
     2341 cgcaaaagca gttgctacgg ttacaaaaat cccgtcatcc ccacgaaagc gaaaatcctg
     2401 cctgtcggat ttcggttttt tcgggcgttt cgggaactta taaatcgtca ttcccgcgca
     2461 ggcgggaatc cagaacgcgg gacggcggca atattcaaag gttgtctgaa aattcagagg
     2521 ttctagattc ccgcctgcgc gggaatgacg gcggagcggt ttctgctttt ccgataaatg
     2581 accgcaacct aaaacccatc cttcccacga aaacagaaaa acaaaaacct aaaatcccgt
     2641 cgttctcgcg aaagcagttg ctacgtttac cgtcaaaaat gccgtctgaa cgctcaagcc
     2701 ttcagacggc attttttatt tcacaccctt acaggtagaa tttttcgatg actttcaggt
     2761 tgtcatccaa tttgtacacc agcggctgac cggtcgggat ttccaagccc ataatgtctt
     2821 cgtcggaaat gccctcgatg tgttttgcca gtgcgcgcag ggagttgccg tgcgccgcta
     2881 ccaagacgcg tttgccgctc aaaatcgcgg gggcgatttg gtcttcccaa aacggcaata
     2941 cgcgctccag cgttacttgc agattttcgc cgtcgggtac gacatcggca ggcagatggg
     3001 catagcggcg gtctttgtgt gcggaaaacg cgtcgtcttt gtccaaaagc ggcggcaggg
     3061 tgtcgtagct gcgccgccag atgcggactt gctcgtcgcc gtattgttcg gcggtttgtt
     3121 ttttgtccag gccttgcagt cggccgtagt ggcgttcgtt cagccgccat gttttgattt
     3181 gcggtacgaa cagttggtcg gattcttcca aaacgatgtt gcaggtctta atcgcgcggg
     3241 tcaggacgga tgtgaaggcg atgtcgaact catagccgtt ttctttcagt tttttaccgg
     3301 cggcagcagc ctcggcaagc ccctgctcgc tcagcttcac gtcgcgccag cctgtaaaca
     3361 ggtttttcgc gttccattcg ctttgtccgt ggcggataaa taccaattcc atatcgtctc
     3421 caatgtgtga aagtgggaaa gccttattta taacatattt tcacattccc gtatttgatt
     3481 cagattcaga cacgcgccca ctatggtttg ccgttttgat ttacaataat gccctttgct
     3541 ttacattccg catacacaat gtttcaacac acaggacgac acataaagca ccgccctatg
     3601 tgttgccctg atttggaagg ggttgccccc tcccaaataa agtctgattc taccgccccg
     3661 aaggacagat gtccaagtgg cgggggttca accgaaaagg aaatacgata aatatgcaac
     3721 cgcacgctcc acataccgat tccaatacgc tgatgctcgg ccgatacgcc gaacgcgcct
     3781 atctcgaata cgccatgagc gtggtcaaag gccgcgcgct gcctgaagtt tcagacggcc
     3841 aaaagcccgt tcagcggcgc attttgtttg ccatgcgcga tatgggtttg acggcggggg
     3901 cgaagccggt gaaatcggcg cgcgtggtcg gcgagatttt gggtaaatac cacccgcacg
     3961 gcgacagttc cgcctatgag gcgatggtgc ggatggcgca ggattttacc ttgcgctatc
     4021 ccttaatcga cggcatcggc aacttcggtt cgcgcgacgg cgacggtgcg gcggcgatgc
     4081 gttacaccga agctcggctg acgccgattg cggaattgct gttgtccgaa atcaatcagg
     4141 gaacggtgga tttcgtgccg aactacgacg gcgcgtttga cgagccgctg cacctgcccg
     4201 cccgcctgcc tatggtgttg ctcaacggcg cgtcaggcat cgcggtgggc atggcgaccg
     4261 agattccgtc gcacaatttg aacgaagtga cgcaggcagc gattgcgctg ttgaagaagc
     4321 cgacgctgga aaccgccgac ctgatgcaat atattcctgc gcccgatttt gccggcggcg
     4381 gtcaaatcat cacgccggcg gacgaattgc gccggattta tgaaaccggc aagggcagcg
     4441 tgcgcgtgcg tgcgcgttat gaaatcgaaa aattggcgcg cggacaatgg cgcgtcatcg
     4501 taaccgagct accgccgaac gccaattccg ccaaaatcct tgccgaaatc gaagagcaga
     4561 ccaacccgaa accgaaagcg ggcaaaaagc agctcaacca agaccagctc aataccaaaa
     4621 agctgatgct ggatttaatc gaccgcgtgc gcgacgagtc cgacggcgaa catcccgtgc
     4681 gactggtgtt cgaaccgaaa tccagccgca tcgataccga taccttcatc aacacgctga
     4741 tggcgcaaac ttcgctggaa ggcaatgtgt ccatgaactt ggtgatgatg gggctggaca
     4801 accgccccgc gcagaaaaac ctgaaaacga ttttgcagga atggctggat ttccgcaccg
     4861 taaccgtaac acgccgtctg aaattccgtt tgaaccaagt ggaaaaacgg ctgcacatcc
     4921 tcgaaggccg tctgaaagtc tttctgcaca tcgacgaagt gattaaagtc atccgcgaat
     4981 cagatgaccc gaaagccgat ttgatggcgg cgttcgggct gaccgaaatc caagccgaag
     5041 acattttgga aatccgcctg cgccagttgg cacgtttgga aggtttcaaa ctcgaaaaag
     5101 aattgaacga gttgcgcgaa gaacaaggcc gtctgaacat ccttttgggc gacgaaaacg
     5161 aaaaacgcaa gctgattatc aaagagatgc aggcggacat gaagcagttc ggcgacgcac
     5221 gccgcacgct ggtggaagag gccggacgcg ccgtgctgac gcaaaccacc gccgacgaac
     5281 ccatcacgct gattctgtcg gaaaaaggct ggatacgcag ccgcgccaga cacaacctcg
     5341 atttgagcca aaccgcgttc aaagaaggcg accgcctcaa acaaaccctc gaaggcagaa
     5401 cggttttacc cgtcgtcatc ctcgattcac tgggcagaac ctacaccctc gatgccgccg
     5461 aaatccccgg cggacgcggc gacggcgtgc cggtttcatc cttgatcgag ctgcagaacg
     5521 gcgcgaaacc cgttgcgatg ttgacaggat tgccggaaca acattattta ttatcaagca
     5581 gcggcggcta cggcttcatt gccaaactgg gcgatatggt cgggcgcgtg aaagcgggca
     5641 aagtggtcat gaccgcagac agtggcgaaa ccgtcctgcc gcccgttgcc gtctatgcct
     5701 cctcgttcat caaccccgat tgcaaaatca ttgccgccac cagtcaaaac cgcgccatcg
     5761 ccttccccat cggcgaattg aaaattatgg caaaaggcaa aggactgcaa atcatcggat
     5821 taaacgccgg cgaatcgatg acgcataccg ccgtttcttc cgaggcagaa atcctgattg
     5881 aaagcgaagg caggcgcggc gcagcgcaca aagaccgcat ccccatctcc ctgcttgagg
     5941 caaaacgcgg caaaaaaggc aaactattgc ccatatcggg cagcctgaaa cagctttctt
     6001 ctccgaaata aacccgattc cgcacataat tatggtaatt tccaaccccc gcgaacttga
     6061 aaaactcaaa gaccggattc ccaatctgat caacatcatc cgcgtcgcca tcgttttccc
     6121 gctgatgatt atgcacatcc tcgggctgga aaccggcagc cgtgcgaacc tgcacgcttc
     6181 gtggacggcg tgggcgtttt atgtttggct cgccatttcc tgctggatga ttttcttttc
     6241 caccctcaat ccgcaatggc aatggcaggc tttgaagata ccgagtttca gcgccgtgtc
     6301 cgacattacc atgattggca tactgaccta cctgttcggc ggcatcaact cggggttcgg
     6361 catcctgatc ctgcccttcg tgggcagctc ctgcctgctc agttacgggc gttaccccct
     6421 gctctatgcc agctacgccg ccatcctgct gatattgaat gcccttgcag acagcaatat
     6481 caatatgtat ccgctgattc tgggtgcaaa aaccgtcacc aacaccttcg tcctcgtgac
     6541 cggctcctat ttcgtcgcca tgattgcctc gctgtcggtc agatacatcg accgtgccgg
     6601 caaacttgcc catgaaaacc acgccgccta ccgccgcatc aggggcttga accaaatcgt
     6661 gctcaaccgc gttcaggaag cggtcgtcat catcaacgtc gagtatcaga ccgtactgtt
     6721 caataaaaag gcaaaagatc tgctccccac gcttgaaatc ggacagcata ccgccctgtt
     6781 cgaccctatt accgttttat gggacaaggc cccttcgcgt actttcgaac gcaatatcga
     6841 cacgcccgcc ctgaccgccc gcatccgcgc cgtgccgatg aacaaagagc agaacaagct
     6901 gctcatcctc tacatccgcc cgcaaagcga aattcaggca gaagccctgt ccgtcaaact
     6961 tgccgcgctc ggacaactga ccgccaacct cgcccacgaa atccgcaacc cgatgtccgc
     7021 catccgccac gccaacgacc tgctgcgcga aaatatggaa gcgggggcgg cagatccgtt
     7081 caacgccaaa ttgtgcaaaa tcatcgacgg caacgtctgc cgtatcgaca aaatgctcga
     7141 agatatttcc tcgctcaaca agcgcaacaa aaccgaacgc gaaaccatcg gcctgatacc
     7201 gttttgggaa gaattcaaac aagagttcct gctcggccat cccgatgccg ccggctgcat
     7261 ccgcctagat atgcagggca atcacctgac tgcctatttc gatcctgccc acctgcggca
     7321 aattatgtgg aacctcgcca acaacgcgtg gcggcacagc cgcaaacagc ccggctcgat
     7381 ttccgtcacc atccgccccg cgcaaaaaaa caccgtctgc atcctctttg ccgaccgccc
     7441 gaagtgcagg aacacctgtt cgaacccttt tacaccacgg cggaaaacgg caccggcctc
     7501 gggctgtatg tcgcccgcga actggcacat gccaacttcg gcgatttgac ctacctgccc
     7561 gaagccaaat gtttcgaact cgcattaccg gaaaaaacca atgactgaac tgcaacaccc
     7621 cgtcctcgtc gtcgataacg aaaccgacat tctcgacctg atggaaatga ccctgatgaa
     7681 aatgggcttg cgcgtccata ccgcgtcagg cgttgccgaa gccaaaaaca agctcgacag
     7741 ccaacgctat tcgctcgtcc tgaccgatat gcgtatgccg gacggctcgg ggctggaagt
     7801 cgtccaacac atcaacagcc gcctgctcga tacgccggtt gccgtcatca ccgccttcgg
     7861 caacgccgat caggcacagg aagcgttgcg ttgcggcgcg ttcgaccccg ataccatgca
     7921 gatacaggac tatctcgacc aaatcgaacg cgacatcatc gaacaaaccc tcaaacaaac
     7981 cgaaggcaac cgcacgcagg ccgccaaacg cttgggcatc agcttccgtt ccatgcgcta
     8041 ccgtatggaa cgcctcaaca tcggctgacg acaaaacggc atccgcacca tctccgccca
     8101 cccgaaaaaa tgccgtctga aacggcacgg caaagcgggt tcgccccacg cccgaacgga
     8161 cacaaaacac catgaccgac atcctcattg acaacaccgc caccgaagcc gtccgcgccc
     8221 tgatacaggc attccccctt gtgcccgttt cccaaccgcc cgaacaaggc agttacctcc
     8281 ttgccgaaca cgataccgtc agcctcaggc ttgtcgggga aaaaagcagc gtcatcgtcg
     8341 attttgcctc cggcgcggca caataccggc gcacaaaagg cgggggcgaa ctcatcgcca
     8401 aagccgtcaa ccacaccgcg caccccaccg tttgggacgc aaccgcagga ttggggcgcg
     8461 acagcttcgt cctcgcctcg ctcgggctgg ccgttaccgc cttcgagcaa catcccgccg
     8521 tcgcctgcct gctttcagac ggcatccgcc gcgccctcct caatcccgaa acgcaagaca
     8581 ccgccgcgcg catcaacctc catttcggca acgccgcagt acaaatgccc gcccttgttc
     8641 aaacacaagg caaacccgac atcgtctatc tcgaccccat gtatcccgaa cgccgcaaaa
     8701 gtgccgccgt taaaaaagaa atgacctact tccaccggct cgtcggcgaa gcgcaagatg
     8761 aagcggcact cctgcatacc gcacgccaaa cagcaaaaaa acgcgtcgtc gtcaaacgcc
     8821 cccgcctcgg cgaacacctt gccggacaag cccctgccta ccaatacacc ggcaaaagca
     8881 cccgcttcga cgtttacctg ccctacggga cggacaaggg ataacgccca taaaacaaga
     8941 caccgaaaaa tttgccgttc ttatgcaaac gagaaaccgg tttttgcgtt tcgactgttt
     9001 tggataaatc atcacacctt aaagtttgtc attcccacgg aagtgggaat ccagaaatga
     9061 aaagcaacag gaatttatcg taaatgaccg aaaccgaac
//
LOCUS       DAWGBY010000076         9097 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.076, whole genome shotgun sequence.
ACCESSION   DAWGBY010000076 DAWGBY010000000
VERSION     DAWGBY010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9097
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.076"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(106..699)
                     /gene="ribA"
                     /locus_tag="WHG62_001450"
     CDS             complement(106..699)
                     /gene="ribA"
                     /locus_tag="WHG62_001450"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ1725544.1"
                     /translation="MSEMLNHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(692..1369)
                     /locus_tag="WHG62_001451"
     CDS             complement(692..1369)
                     /locus_tag="WHG62_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725545.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMGMGTASIDRSV
                     LWRSDEGWKLADYLSYDNVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENQAFQ
                     LICLSQQGEGLENIWNLDENVADVSLACRCAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPICTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKLLLGMSAG
                     KDGSEDV"
     gene            1523..1607
                     /locus_tag="WHG62_001452"
     tRNA            1523..1607
                     /locus_tag="WHG62_001452"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1557..1559,aa:Leu,seq:tag)
     gene            2127..3161
                     /gene="purM"
                     /locus_tag="WHG62_001453"
     CDS             2127..3161
                     /gene="purM"
                     /locus_tag="WHG62_001453"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ1725546.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
     gene            complement(3635..4291)
                     /locus_tag="WHG62_001454"
     CDS             complement(3635..4291)
                     /locus_tag="WHG62_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ1725547.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     NRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDNDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPMLE
                     "
     gene            complement(4288..6060)
                     /locus_tag="WHG62_001455"
     CDS             complement(4288..6060)
                     /locus_tag="WHG62_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ1725548.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENISFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGVTVETAWENGSFLPPQETQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAV
                     LEIRSQPQQGTTVSLTGASEESLK"
     gene            6266..6871
                     /locus_tag="WHG62_001456"
                     /pseudo
     CDS             6266..6871
                     /locus_tag="WHG62_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
     gene            7003..7620
                     /locus_tag="WHG62_001457"
     CDS             7003..7620
                     /locus_tag="WHG62_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ1725549.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            7628..8491
                     /locus_tag="WHG62_001458"
     CDS             7628..8491
                     /locus_tag="WHG62_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ1725550.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(8504..8938)
                     /locus_tag="WHG62_001459"
     CDS             complement(8504..8938)
                     /locus_tag="WHG62_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ1725551.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
BASE COUNT         2239 a         2194 c         2444 g         2220 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactataaaa cttattgctt tatcaaggta tggaaacctg
       61 tttcccgaaa ggcggcgcag gatgcccgtt ccctgcaact ttgccttatt ccgacatcag
      121 atgtcccagc ttgtctgctt tggtttggag gtagcgtttg ttttcaaggt tttccccgac
      181 gtgcaggggg atgcgttcga ccacgttaat ccccgcatct ttcagggttt ggattttttc
      241 ggggttgttg gtcagcagtt tgaccgagcg gatgcccaga tattcgtaga tagattgcgc
      301 caaacggaaa tcgcgggcat cgacgggcag cccgagtgcc aaattggctt caaccgtatc
      361 cataccttgg tcttgcagat gataggcgcg gattttgtta atcagcccga tgccgcgtcc
      421 ttcctgacgc agatagacga tgatgccgcg cccctctgtc tgtaccgccc tcatggccgc
      481 ttcaagttga ggtccgcagt cgcattttct cgagaacagc gcatcgcccg tcaggcattc
      541 ggagtggatg cgcgtcagaa ccggattgcc gtctgaaaaa ttaccgacgg tcagcgcgac
      601 gtgttcctgc ccgtttgcct cttcaaagcc gtgcatcgta aatacgcccc attcggtcgg
      661 caggcggcag gatgccacat ggttcaacat ttcagacatc ttcactccca tcttttccgg
      721 cagacatacc caacagcagt ttcaaaggtt cggacaaagc caaggcaaga gccacccatt
      781 ccacctgtgc tgccgtaccc gcacactctg cgcattcaaa ttccacatga accacgccca
      841 acacaccgcc actttccgtg cagattggaa tggaaatttg cgccgccgaa gcatgattgc
      901 gttctcccga aagctctccc aaatccaacc aacggcgtac atccgaggca acattcatcc
      961 agccgctttg cgcgcaacgg caggcaagtg aaacatcggc aacattttca tctagattcc
     1021 atatgttttc caaaccttct ccctgttggg acaggcatat cagttggaaa gcctggtttt
     1081 cagacggcat caaggcatag accgccgcac tccgcacgcc tgtcgagcgc gaaaacaccg
     1141 aatccaaagc catgaaaagc cgtttcagtg catcttcgcg gacattgtcg tacgacaggt
     1201 aatcggcaag tttccaaccc tcatcactgc gccacaaaac cgaacggtct atcgaagccg
     1261 tccccatacc cattaccgtc tgcgccgtca gatacgccgc ccgaacctcg tcaagcggca
     1321 gcttcaaacc ctgagtcagc agaaaatcct taatcaaagc agcaggcata cccaaattcc
     1381 gtcaataaaa acaaaaaacc gcccgattcc gatgtcaggc ggacgaaaaa cagattttac
     1441 cgccccaaac cccaagccat caacagcccc gccgaaaacc ttgcacaaaa aaacaaaatc
     1501 tgtataatcg tccaattccc atgcggacgt ggcgaaattg gtagacgcac cagatttagg
     1561 ttctggcgcc gagaggtgtg agagttcgag tctctccgtc cgcaccaata atgataaata
     1621 aattatatag ttaatgctta tcgggacaaa ttagtgccac aaaacataag tcgtctgctt
     1681 ttcagcgggc ggctttttta tctgcctata tgtttcaaca cgcagaacgg tacataaagt
     1741 gccgccattt gttccgcacc gaatcggaaa cgggtgcttc cgcccgcaat cagattcacc
     1801 gcccctaatg ccggggtttc aaccggaaag aagaaaatat tgattttgat gatggcatca
     1861 aaaaacccct tccgctcgtc tgccaaaagg aatggttaag aaaagcaatg cgtcttttga
     1921 tggaacgcga tatataagga attgagggga agggcaggcg ggtttctgcc cgttaatcct
     1981 gcggacggtc ccgccaaacc cgacacgcgc gggtatatgg cggactgttt acaatattgt
     2041 ctaaaaatct gaacctgcaa acgtgaaata aggtagaata cgccccgtta ttttaccgtc
     2101 caatccccat ttaccaagga aaaacgatga gtacttcatt gagttaccgc gatgcaggtg
     2161 tcgatatcga cgcaggcgac caactggtcg aaaacatcaa accgtttgcc aaacgcacca
     2221 tgcgtccgga agtattgggg gatttgggcg gttttggcgc attggtcgaa atcggcaaga
     2281 aatataaaaa tcccgtattg gtcagcggta cggacggcgt gggtaccaag ctcaaacttg
     2341 ccttcgattg ggataaacac gatacggtgg gcatcgacct tgttgcaatg agtgtcaacg
     2401 atattttggt tcaaggagca gaacctctgt ttttcttgga ttatttcgcc tgcggcaaat
     2461 tggatgttcc gcgcgcaacc gatgtcatca aaggcattgc acaaggttgc gaagaatccg
     2521 gctgcgccct gattggcggg gaaactgccg aaatgccggg tatgtatccc gtcggagaat
     2581 acgatttggc gggttttgcc gtcggcgtag tggaaaaaga gaatgtcatt accggccgca
     2641 gcatcggcgc gggcgatgtg gtattgggtt tggcttccaa cggcgcacat tcaaacggct
     2701 attcccttat ccgtaaaatc atcgaacgcg acaatcccga tttggatgcc gagtttgata
     2761 atggcaaaac cttgcgtgag gctgttattg cgccgacccg tctgtatgtg aaaccgattc
     2821 ttgccgcttt ggaaaaattt accattaaag gtatggcaca cattaccggc ggcggcatta
     2881 ccgaaaacgt gccgcgcgtg ttgcctgaaa acacggttgc acaaatcgat gctaaatcgt
     2941 gggaattgcc caagctcttc caatggcttc aaaaggcggg caatgtggaa acccaagaaa
     3001 tgtaccgaac ctttaactgc ggcatcggca tggtcgttat tgttgctgcc gaagatgccg
     3061 atgcggttca gggtctcttg ggtgaacaag gtgaaacagt ttaccgttta ggtttgatcc
     3121 gtgagcgtca gggagacgag catcaaaccc aggttgcctg attgcttcta tagcgaaatg
     3181 ccgtctcaaa catgggtttg gacggcattt ttatagtgga ttaacaaaaa tcaggacaag
     3241 gcgacgaagc cgcagacagt acagatagta cggcaaggcg aggcaacgcc gtactggttt
     3301 ttgttaatcc actatatatt gattgatatg agggtgggtt acacatgctt aaacgatata
     3361 agccattgta tatttatggg attcggaatg gaacatttta ccctgcatta gtatttccgc
     3421 tttttattat gccgtctgaa aatatcatga tgatgcgttt tcagacggca tagctgatat
     3481 tgcagtatca gataggggca aacggaaaac actgaaccga acaatattac tgctatgcca
     3541 agcgtactta tgggggcata aacttacatg cttggtctgt tatccgaatg accgtacggg
     3601 gattaaaacc cctaatatgc cgtctgaacc cgccttattc cagcatgggt tgggggacgt
     3661 tgtgccggat ggcgtaaaca gcggcctgca cccggctgct gaggttgagt ttgcggagca
     3721 ggttttgaac gtggactttg acggtggatt cggcaagatc gaggtggcgg gcgatgattt
     3781 tgttgctgtg tcctgcggcg agatagccca agatttccag ttcgcgaggg gtaagtgagg
     3841 agagtgcctg cgtcccttgg gcaggttggg gggaaatcag gcttttgacg agtttggcgg
     3901 tcatctcggg cgagaataca ttatcgcctt cggcggcttt gcgtatgctt tcgagcagaa
     3961 agtcggcgtt gatgtttttc agcaggtagc cgcgcgcgcc gatgcgcata cattcggtca
     4021 agtcgtcgtt gtcttcggaa acggtcagca taatcactgc ctgctgcgga ttgatgctga
     4081 tgatttggga gagtgcttcg cgtccgttca taccgggcat atcaaggtca agcaggacga
     4141 catcgggttg gagccggttg atcattttaa tgcccgagag gccgtctgcg gcttcgccga
     4201 tgacttcaaa accgtgttgg cgcgacaaaa gggctttaat gccgctgcgg aagagggtgt
     4261 ggtcgtctat cagaataatt ttaatagtca tttcaagctt tcttcagatg cacccgtcaa
     4321 tgagacggtg gttccttgtt ggggttggga acggatttct aaaacggcac ggatgcgttt
     4381 ggcacgctcc tgcataatgt gcagtccgac atggctgccc gtaggttctc ctattttctc
     4441 cgtgtcgaaa ccttgtccgt tgtcttggat ggtcatggta aagcgtccgc cgtgttcgga
     4501 aagggtgaat tttacatggg tggcgcgggc gtgtttgcgg atgttggaca ggctttcctg
     4561 caggataaaa atcatttgga gctgcgtttc ctgaggcggc aggaacgaac cgttttccca
     4621 ggcggtttcg accgttaccc cggtttgttg cgtaaagcgg gcgaataggt cggcaacggc
     4681 ttcgggaaat tctttattgc tgattttggt acggaagttg agcagcagtt cgcggacatc
     4741 ttcataacat tcctgcacgc ctgttttgat aaagctgatg ttttctgcgg cttcctcccg
     4801 tttgttttcg gcaaaggcgg tttccagcat ctgtacctgt aggtttagga acgttaatgc
     4861 ttgtgcgatg ctgtcatgta atccttgcgc aatcaggttg cgttcctgca atactgcaag
     4921 caggcgtttt tcttcctcct gttttgcgcc ggcaagcgat acgcccaatt gcctgcctag
     4981 tgtttgaagc aggatgcggt cgtcttcatc aagagaaatg ccgtttggaa agctgagcaa
     5041 cagcctgccc aatgtttcgt tctggtactc aatggggaag atttcctcat ggtacttccc
     5101 caaatccgaa gctgctgtgc cgcaatccgc atgatgaatg gaaacataaa catcggatcc
     5161 gccgtccaaa caaactctgc cggaatctgc tcctacggcg ggcaggatac ggtttagaaa
     5221 atgttctgca gcctgttgcg gtatgtagga ttggtgcagg tcccgtgtag tttggtacag
     5281 cagggtcagg ttttgatttt gtttttcgag actgcgtgtc tgctcggcga cttgtccttc
     5341 caaatcatca tataaaattt tcaacctgcc gcccatttga ttgaaacaac gcccgacctg
     5401 tttgaattcc ggcgtaccgc cttcgggaac cggaatatcg aaacacctcc gtccgatgcg
     5461 ttccgcacct tcccttaacg cctgcagcgg ccggataacc caaatctggt gccaaaacag
     5521 catcagtaca gacgacacca gcgtcatcaa cataattgcc cattgaaaac gcctgagcca
     5581 ccatgtgttt ttttcgttgg cattttccaa tgcctgcaaa aacagttcga tgtttccggc
     5641 aaagcggtag agatcgacct gagtcggtcg ccggtaggac tggagcgggg ggaggatgtg
     5701 tgcctgccaa tctataatca gcatggattg tatcaaatca taagcaagag gggtgtccga
     5761 aggaatcagc ggatggatgg catcactttg tgaaatacga ttcaggcttt tttcaaattc
     5821 gtcaacctga ttgtctattt gggagcgggg agatccttca cccgccatgt atgccagacg
     5881 gtatgcctgc attctcaagt tgcccgcctc ttcgatgacg gaggccgcgt tttccagacg
     5941 caaagagagc agcagtgtca aaacgacaga caatgccgcc aacccgaccc acactccggt
     6001 caggagtttc aggcgtaggg aaaggctgat gccgtctgaa aaacgggctg gcagtatcat
     6061 gctcggcgaa aaattgttct aaataatgca aacaatatca ttctttggga ttagatacaa
     6121 ctgctcagaa agaattggtt aaggaaaaca taatccgtac cgcttcagtg ttaaatcatg
     6181 ttatgataaa attcagataa tatgaattta tttgccgtct gcttcagacg gcattttgag
     6241 tcattgggaa cggcagactg caatcatgaa aacctcgaac ttttccaaga gagcatccgc
     6301 aatgaaaact tttgccctga tactggccgg cggtcaggcg agccgtatgg gaggcgagga
     6361 caaagggctt gctcttttgg ggggtaaggc actgatagat catgtcatcg acagggtcag
     6421 gccgcaggtc agccatatcg ccatcagcac caaccggaat ttggaagaat atgctcgaag
     6481 aagtccgcat atttttccgg acgcacggca gtggcagcat ttcggcccgc tttcggcatt
     6541 gtgtaccgca gccaacgatt tgcagttggc gactgccgac tggcttttgg ttgtgccgtg
     6601 cgatatgccg tatctgccgg gcgatttggt ggcgaggttt gaaaccgtgt cgaaacgcac
     6661 accgttgtgc aatgcgtatt atgtggaaac gccgataacg atgcactaca acattatgta
     6721 tatccgcccg cagattctgc aaagcgcgat tccctatctg ttttcgggta tgaaaacatt
     6781 aagaagctgg ttgcagcagc aaagggcgcg gtcggtcaga ttcgagtttg acgggcattt
     6841 tgccgacttg aacacgcaaa ccgagaaagg aaaggtcaag ccgtaccggg cggtttttgc
     6901 ccgaatcgga ggcataatgc tgtctgaagg catttcagac ggcatttttc gcggggagat
     6961 gctacaattt gcaccatttt accgacacag gaaaacagga ttatgtttac aggcattgtt
     7021 caaggcttgg gaaaactgac ggcaatccac cgcccgtcgg aggcatttca cacttatgtc
     7081 gtcgagcttc cgcaagaggc ggcggacaat ctgcaacgcg gcgcatcggt tgccaataac
     7141 ggctgctgcc tgacgattac cgaaatcgaa ggaaaccgcg ttagtttcga tttaatggcg
     7201 gaaactttgg caaaaaccaa tttggggctg ctgaaggaag gcgattgcgt caacatcgaa
     7261 cgggcggcgc gtttcggaga cgaaatcggc ggacacgtca tgagcggaca cattatggca
     7321 accgtgccta ttgtcgaaat cgaacgggac gggttcaacc gcacggtttg gttttcgctc
     7381 ccgcatgaac tcaaacccta tatcctgacc aaagggttcg tcggcttgga cggttgcagc
     7441 ctgaccatag gcaaagtcga agacggccgt ttcaatgtcc atctgattcc cgaaactttg
     7501 gaacggacgc tgttcggcag cagaaaggtc ggcgacagga tcaacatcga aatcgatccg
     7561 aatacgcagg caatcgtcga caccgtcgaa cggctgatgg cgcaaagata tgcaaagtga
     7621 ggtagagatg gaattgaacg aatttctcga taaagcctat gccgttttgc ggcgtttgga
     7681 tgccgtgctt ccgcccgaac ccgggcatac ggattggaac gcgcttgcct tccgctggca
     7741 gagtgcgggc aaaaaaggtt ttttggaaca cttgcccgat ccgcacacct ttcccttggt
     7801 aaggctggcg ggagtcggca ggcaaaccga attgctggtg cgtaataccg aacagttcat
     7861 tgtcggcaga cccgcgaaca atgtattgat gagcggcgcg cgcggaacag gcaaatcctc
     7921 gctggtcaaa gccctgctac acgaatatgc ggataaggga ttgcgcctga tcgaagtcga
     7981 taaaagcgat ttaatcggcc tgccttacct gttgacgctt ttgaaggaac gtccggaaaa
     8041 atttatcgta ttttgcgacg atttgtcgtt tgaaagcggc gatgaaacct ataaggcatt
     8101 gaaaaccgcg ttagacggcg gtctgtctca acgttgcgcc aacgttttgg tttacgcgac
     8161 ttccaacaga cggcacctga tgcccgaata ttttgacgag aatgccggta cgacggggat
     8221 gcggggggaa atccatcaga aagaagcggt ggaagaaaaa atatccctgt ccgaccgatt
     8281 cggattgtgg ctcagttttt atccgttcga tcaaaacgat tatctggcgg cggtgcaaaa
     8341 ttggctggaa gatttcggcg tgccgtatga tgaaaccgca cagatggcgg cattgcagtg
     8401 ggcgcagacg cggggcagcc gttcgggacg ttccgcgtgg cagtttgcct gcgactgggc
     8461 gggcaggctg ccgaaacaac gggcgttgtg agcgtttcgg ggattatttg aggcaggaag
     8521 aaagccacat ttgctgctgt tgcggtgtga ggatatggaa gaaccggtgt tggatttcca
     8581 attcgtccac tgcaaaatcc ataccggaca aatagcggct ttcgacataa tcgcgcgcct
     8641 cgttccgatt aaaaacatcc gaggaaatga tttcgacgac agaccggcgg cggctgtgtt
     8701 cggaatgcat aaccttcaaa cgcgccctgt cgcccgccat tttgaaggcg gtgcggattt
     8761 tacgcagctc attgtgctga ctttgggtca gcccgagtcg gcgtatgtcg cagttcggtt
     8821 gaaaatcgtt cggggggata taagccgtgg cggcgtggga aagctgacag gaaagcaaag
     8881 ccatacttaa aaaagaggcg gcaggtttgg caaaacggca gggagcaggc agtggcacgg
     8941 cttttcctct tgttggaaat tttaggaaat atactagatt gacgtgtgaa agatggtatt
     9001 atcgcggtta acttttgtta ataatgcgta cgtatgtccg gcaggcagac ataacggcgg
     9061 aatcggaacg tatagtggat taaatttaaa ccagtac
//
LOCUS       DAWGBY010000077         9045 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.077, whole genome shotgun sequence.
ACCESSION   DAWGBY010000077 DAWGBY010000000
VERSION     DAWGBY010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9045
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.077"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(57..1850)
                     /locus_tag="WHG62_001460"
     CDS             complement(57..1850)
                     /locus_tag="WHG62_001460"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ1725552.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAEAQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2096..3205
                     /gene="proB"
                     /locus_tag="WHG62_001461"
     CDS             2096..3205
                     /gene="proB"
                     /locus_tag="WHG62_001461"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ1725553.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGIARIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3218..4480
                     /locus_tag="WHG62_001462"
     CDS             3218..4480
                     /locus_tag="WHG62_001462"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ1725554.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRQDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPDALQLIEDTGRESSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRNRIEAGLPPVRFRLDPQAARHIGGEAAGADNFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
     gene            complement(4705..7737)
                     /locus_tag="WHG62_001463"
     CDS             complement(4705..7737)
                     /locus_tag="WHG62_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEZ1725555.1"
                     /translation="MFWIVLIVILLLALVGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKMAVYWLFVGVVRFCRNYLAHESEPDRLVPPASAN
                     RADVPNASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDETADIHIEEPAAPDAWVVE
                     PPEVPKVPMTAIDIPPPPPVSEIYNRTYEPPSGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAICPFEDVPSERPSCRVSDTEADE
                     GAFQSEETDAVYEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDNPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNV"
     gene            7902..8582
                     /locus_tag="WHG62_001464"
     CDS             7902..8582
                     /locus_tag="WHG62_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ1725556.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLALYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAALWLAALLMLPYCLLFA
                     DSAGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            8611..8970
                     /locus_tag="WHG62_001465"
     CDS             8611..8970
                     /locus_tag="WHG62_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ1725557.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT         1958 a         2559 c         2402 g         2126 t
ORIGIN      
        1 ccgcaatgcc gtctgaagcc tttttatgct tcagacggca tcgtctgttt tcacgctcaa
       61 atcgtaccgc tgccttgcgc tttcggtttg gcggcactaa attccagctt gctcaaagcg
      121 gaaaggtagg ctttggcggt ggcgaccaaa acgtcggtat ccgcgccctg accgttgacg
      181 acgcggttgc cgcgcgccag acggacgctg gtttcgccct ggctttccgt accttgcgtg
      241 acggcgttga cggaataaat ctgcaaagtc gcgccgcttt gcgccacgct ttcaatcgct
      301 ttgaaaatcg catccacggg gccggagcct gtggcggaag cgcgtttttc ttcgcctttg
      361 atgctgaaca cgatgtcggc gcgcggctct tcgccggttt cggtgctgat tttttgggag
      421 atgaatttgt agctctcggc attcatgctg cccatttcgt cggataccag tgcgtgcagg
      481 tcttcatcga agatttcgcg ttttttgtcg gcgagttctt tgaagcgggc aaacgcggcg
      541 ttcagtgcct cttcgctttc caactcgatg cccaaatccg ccagcttggt tttgaaggcg
      601 ttgcggccgg acaatttgcc caagctcaaa cggtttgttg cccagccgac cgattcggcg
      661 gacataatct cgtaagtttc gcggtgtttc agcaccccat cctgatggat gcccgattca
      721 tgcgaaaagg cattggcacc gacaatggct ttgttgggct gcacgggata gcccgtaatg
      781 gtggacacca gtttggacga aggcacgatt tgcgtggtat cgatgccggt ttccaagccg
      841 aacaagtcgt ggcgcacttt caacgccatc acgatttctt caaccgaagc attgcctgca
      901 cgttcgccca agccgttgac agtacattcc acctgacgcg cgccgccttt taatgcggca
      961 agcgaattgg caaccgccaa gcccaaatcg ttgtggcagt gtgccgacca aacgactttg
     1021 ccgccgttgg gcgttttggc aatcagttcg cggaaaaatt cttcggtttt atacgggatg
     1081 gaatagccga cggtatcggg aatattgatg gtggtcgcgc ccgcttcaat caccgcgccg
     1141 cagatttcgg caaggaaatc gatttccgaa cgcaacgcgt cttcgcagga aaattccaca
     1201 tcgtcggtgt attcacgagc gattttcacc gctttgaccg ccgcctcaat cacctgcttc
     1261 ggcttcatct tcaatttgta ctccatatgg atggggctgg tggcgatgaa ggtgtggatg
     1321 cgttttttcg gcgcgggcgc aacggcctca cccgcctgac ggatgtcccg ctcgatggcg
     1381 cgggacaatg aacagaccgt tgatttggta atggttttcg caatcgcatt gaccgcctcg
     1441 aaatcgcccg ggctggcagc ggcaaaaccc gcttcgatga tgtccacacc caatttttcc
     1501 agctggcggg cgacgcggat tttttcctct ttggtcatag cggcgccggg cgactgctcg
     1561 ccgtcgcgca gggtggtgtc gaaaatgata acgcggttgg cctgtgtcat ttctgttctc
     1621 tccagagatt cgtttttttg taaaaaagca ttcaaatcca gcggcctgcc ttgcgcttcc
     1681 gccaacgcgg tcagcttttg cagttgcgcc agaggcagcg agccgcgcgt gcgccattta
     1741 tagatggcgg cggtcgtcgc ggcattttcg ggatcgtgct gtttcaacgc ttcggcaagc
     1801 gcgttcacgc cgccgaaata agcaaccaag cggtctatat ctaattgcat ggtagtcctt
     1861 gtctaaaata aatcagccta cagcagaaat atggacagga ttatacgcat tttggacaaa
     1921 acggcaatat aaatttgaaa aatctcaata agccgccata gattttatta attttataca
     1981 ttttgtccat tttattgcag acgcggcgtg attgttgaca attgcggcag aacagggcaa
     2041 attcggcggc acaaggcggc aaacgagaca ggacaaacca acaaggacgg aaacaatgaa
     2101 atacaaaaga atcgtattta aagtcggcac atcttcgatt acccattcgg acggcagtct
     2161 ctcgcgcggc aaaatccaaa ccatcacccg ccagcttgcc gcattgcatc atgcgggaca
     2221 cgagctggtc ttggtgtctt ccggcgcggt tgcggcaggg tttggtgcgc tgggtttcaa
     2281 aaaacgtccg gtcaaaatcg ccgacaaaca ggcttccgcc gccgtcgggc aggggctgct
     2341 gatggaagaa tatacggcaa acctgtcttc agacggcatc gtgtccgcac aaatcctgct
     2401 cagccgcgcc gactttgccg acaaacgccg ctaccaaaat gccggcggcg cactttccgt
     2461 gctgctgcaa cgccgcgccg tccccatcat caatgaaaac gatacggttt cggttgagga
     2521 attgaaaatc ggcgacaacg acacattgag tgcgcaagtg gcggcgatga tacaggcaga
     2581 cctcttggtg ctgctgaccg acatagacgg tctttacacg ggcaacccga acagcaatcc
     2641 cgatgccgta cggctggaca aaatcgaaca catcaaccat gaaatcatcg aaatggcggg
     2701 cggctcgggt tcggcaaacg gcacaggcgg tatgctgacc aaaatcaaag cggcgacgat
     2761 tgcgaccgag tccggcgtac cggtctatat ctgttcctcg ctcaaacccg atgcacttgc
     2821 cgaagcggca gataatcagg cggacggctc gtttttcgtc ccccgtgcca aaggtttgcg
     2881 gacgcagaag caatggctgg cgttctattc cgaaagccgg ggcggcgttt atgtggacga
     2941 aggtgcggaa cacgctttgt ccgaacaggg aaaaagcctg ctgatgtcgg gcattgccag
     3001 aatcgaaggg catttttccc gtatggacac cgtaaccgtg tacagcaagg caaccaaaca
     3061 gcccctgggc aaagggcgcg tcctgttcgg ttctgccgcc gccgaagacc tgctcaaatc
     3121 gcgtaaggcg aaaggcgtgt tcatccatcg ggacgactgg atttccatca cgcccgaaat
     3181 acgcctgctt ctgaccgaat tttagaaaag gaaacccatg tcaaacacac aaaaacagct
     3241 tgcccttgcc aaagcggcaa aaaaatccgt caacacggcg gatacggaag aaaaaaaccg
     3301 cgcgctgctt gctatggcgg acagtctgga agcggcggcg gcagatattt tggcggcaaa
     3361 ccgtcaagac ttggaagccg cggcaggcaa aattcccgaa agcatgaccg accgcctttt
     3421 gttggacggc aaacgcattt gcgcgatggc ggacggcatt agggcggttg ccgcactgcc
     3481 cgaccccgtg ggcgaaatac tggaaacctc gactctgccc aacggcttgg aaatcgtcaa
     3541 aaagcgtgtg gcgatgggcg ttatcggcat tatttacgaa agccgcccga acgttacgtc
     3601 cgatgcggcg gctttggcac tgaaaagcgg cagcgcggtc gtactccgca gcggcaaaga
     3661 tgcattccaa tccgcacgcg ccatcgttgc cgccctgaaa acggggttgg cacaaacccg
     3721 catcgacccc gacgcgctcc agttgattga agacaccggg cgcgaaagca gttacgaaat
     3781 gatgagggcg aaagattatc tagacctgct gattccgcgc ggcggggcgg ggctgatacg
     3841 ggcggtggtt gaaaatgccg tcgtgccggt cattgaaacg ggaacgggca tcgtccacat
     3901 ttatatcgac aaggacgcgg attgggacaa ggcgctccgt atcgtgtaca acgccaaaac
     3961 cagccgcccg tccgtgtgca actcgatgga agtgctgctg gtgcatgaag acattgctgc
     4021 cgacttcctg cccaagctcg aacggctgtt ggttcgcaac cgtatagaag ccggactgcc
     4081 gcccgtccgc ttccgtttgg atccgcaggc ggcgcggcat atcggcggcg aagcggcggg
     4141 tgcagacaat ttcgataccg agtttttaga ctacatcctc gccgtgaaaa ccgtcgcttc
     4201 ggtcgaagag gcggtcgggc acatcgaaac ccacggcacg caccattcag acggcatcgt
     4261 taccgaaaac cgccacgctg cggactattt cacgacccat atcgattctg ccgccgtgta
     4321 tgtcaacgcg tccacgcgct ttaccgacgg tggcgaattc ggcttgggtt gcgaaatggg
     4381 catctccacg caaaaactcc acgcgcgcgg ccctatgggt ttgaaagagc tgacaagtta
     4441 caaatacatc gtacaaggca cgggacaggt tagggaataa tccgaattca aacgtctgat
     4501 atagtggatt aactttaaac cgatacggca ttgcctcgcc ttagctcaaa gagaacgatt
     4561 ctctaaggtg ctgaagcacc aagtaaatcg gtttcgtact atttgtactg tctgcggctt
     4621 cgtcgccttg tcctgatttt tgttaatcca ctataaaaat gccgtctgaa acagtcttca
     4681 gacggcattt ccatttgcaa aaaatcaaac attgtccaag gggacgagaa tcgtacggtt
     4741 gccgttgtgt tccggtgcgg acacaatgcc ttccgcctcc atctggtcaa tcagacgcgc
     4801 ggcacggttg tagccgatac gcaaggcgcg ctgtacgccc gaaatactgg ctttgcgcgt
     4861 tttcaggaca acggatacgg cttcgtcgta catcggatcg gtttcgccgt cgccgctgcg
     4921 cccgatgccg ggcagctctt cgctgccgcc gccgctcaaa atatcgtcaa catagtccgg
     4981 ctcgccaaac tgtttcaaat attcgaccac gcggtgcacc tcttcatccg aggcaaatgc
     5041 gccgtgaacg cgctgcggat aggcagtacc cggcggcagg aacagcatat cgccctgacc
     5101 gagcaggttt tccgcgccca tttggtcgag aatcgtgcgg ctgtcgattt tgctggacac
     5161 ttggaacgcg atacgcgtcg ggatgttcgc cttaatcaga cccgtgatga catcgacgct
     5221 ggggcgttgt gtggcaagga taagatggat gcctgccgcg cgggcttttt gggcgaggcg
     5281 ggcaatcagt tcttcgattt tcttgcctgc cgtcatcatc aggtcggcaa actcatcaac
     5341 cacgaccacg ataaacggca atttttccaa aggttcggga ttgtcgggcg tgaggctgaa
     5401 cgggttgccg attttctccc cccttgctgc ggcttcggcg attttttgat tgaaacccgc
     5461 aagattacgc acgcccataa agctcatcag gcggtagcgt ttttccattt cgttaacaca
     5521 ccagttcagc gcgtttgccg ccagcttcat atcggtaacg acaggggcga gcaggtgcgg
     5581 gatgccttcg taaatgctca attccagcat tttcggatcg atcataatca tacgcacgtc
     5641 ttccggcgcg gctttgaaaa gcatagacag aatcatcgcg ttgacaccca ccgatttgcc
     5701 cgaaccggtc gtgccggcaa ccaacaaatg cggtgctttg cccaagtcgg ttacgacggg
     5761 ctgtccggtg atgtcctgac cgagcgcgag cgtcagcttg gatttggatt cggcaaactc
     5821 gggcgaattg aagatttcgc tcaggcgtat catttggcgt ttcgggttcg gaagttccaa
     5881 acccatacag gttttgccgg ggatggtttc gacaacgcgg atggaagcca cgccgagcga
     5941 acgcgccaag tctttttcca gatttagaac ggaattgccg cgcacgccga catcgggttc
     6001 gatttcataa cgcgtaatca cggggccgga ataagaatcg acaaccttaa ccttgacttt
     6061 gaactccgcc aatttttctt cgatggtgat gctgttttcc aacagttctt cttcggtttg
     6121 cgtcgcctcg ggattgaaca gcggaggcag aagcaggtcg gttgtcggca ggtgttcgta
     6181 taccgcatcg gtttcttcag attggaacgc cccttcatcc gcttccgtat ccgatacccg
     6241 gcaggacggg cgttcagacg gcacatcttc aaacggacaa atcgcctgac tgtcatgccc
     6301 gaacgcttcg gtttccgaca gatattgccc gtttgaccgc tctgccgcac cttcactgcc
     6361 gtcatctgca atagcggcgg tttcctcctg ccaacctcca ttcaaaacat catcggcaag
     6421 atggtcggtt tcggcaatgc ggctgcgttg cgcctgctcg aatcctgacg gcggttcata
     6481 ggtacggttg tagatttccg atacgggagg cggcggcgga atatcgattg cggtcatggg
     6541 aactttcggc acttcgggtg gttcgaccac ccaagcatcg ggcgcggcag gttcttcaat
     6601 atggatatcg gcagtttcat cataaaccgg accgccgtat cccacagacg aaacggtttc
     6661 cgtgaaaaca ttttcggttt cagacggcat ttcgacatcc cgtttcccga caaccgtccg
     6721 actttccgga atcaggcgcg aaatccgcgc ctccgcagaa accgttgcct tgttcggttc
     6781 tttcaaattg acggaaacgc ggcggcgggc atcgcggacg gctgtgccgt ctgaaacgga
     6841 ctgcccttgg gaaacatccg gggattttgc ctccgcctgc cctgcatgac ggcggaacgg
     6901 cgcattccgt gcattttcgg ctttgactgc agaaaaggca gacggatgct gcttctcaaa
     6961 atacggctca aatccgtaat ccgcagactc ggaaaacgct tctttgtccg catcgaacat
     7021 acgggaatac gtgcgttgaa gcacagggtc gtccaaaccg ataatctgca gcccttccat
     7081 cggggtatcg gacacgcgga ctttggggac cgctgtttcg tttttctcaa atgcatcgat
     7141 atagcgtttt ttcgtttccc ttaaagccgc gctgtttaaa gcacgcgttg cttcttccaa
     7201 agtgatttcc ttaaaaaccg gacggacggg cgaaatttcg ctttcagacg gcatcaaccc
     7261 ttcagcaata ctccggtcga atgggatgcg gcggttgtcg attacggcag ttgcaatgtc
     7321 ttccgtatcg gcagcctctt cctccgcagc ttctgcttct tccgtttccg cttcttccgt
     7381 cccgtttcca ctgtctgaat acccgtcgga tgcgttcgga acatccgcac ggtttgcaga
     7441 agcaggcgga acgagcctgt ccggttcgga ttcgtgcgct aaatagtttc ggcagaaacg
     7501 gacgacaccg acgaacagcc aatacactgc cattttgacg gcatggaaaa gcatcagggc
     7561 aagttcggga aaatcgggca taccgtcttt gatttcaggc agctccgcct gtttttcccc
     7621 tttcttttcc tgccacgcag aaacctcgcg catccactcg cgttcggatt gtgcgcggac
     7681 aaaaaacaag ccgacaagcg caagcaacaa aataacgatc aaaactatcc aaaacatatg
     7741 ccgtttcccg caagacaaac gattaaacgg gtttatttta acgtgtttcc atcccaaaaa
     7801 aaacaaccgg ccggcaattc tgccgaaacc gattcggctt tcggtttgcc ccagccgaca
     7861 gtataatagc cgtcccttcc cttaatcttt gcggcattgc catgattttc caaacagtct
     7921 ggttttcaga tatggtactg tcggtttcgt ggattgtcct tatcctgata ctggcagctt
     7981 ccgcgccgtc cgcattccgc tcgcttgccc tctaccgttc cgcccttcca ctgtgtaccg
     8041 taattttttc cgcagcatgg tgtctgaacg cctctgccgg cggcggacag cttgcccaga
     8101 tgaactacca cctgctcgcc gtcaatctgg ttgcactgat ggtgggcact tccgccgccc
     8161 tttggcttgc cgcgctgctg atgctgccct actgcctgct gtttgccgat tctgccggcg
     8221 catatccgcc gaacgctttg gtgctgattc tgcccgcgct ggtcgtcaac cgcctgtcgc
     8281 gtatgctggt caaccgcctg ccgcccaata ttttcatctt tattttcgtc aacggctttc
     8341 tcgcttccgc cgccggcatt ctgttgaccg ggctggtgct gaccggtatt ttggatgctg
     8401 caaacgcttt tccgtccgaa atattgtgga cgaccgccct gcccgtcttt attctgctgg
     8461 cgtgggcgga agccttcctc agcggcattt caactgccat atttgttgca ctgaagcccc
     8521 attggattaa cactttcgac gacaaccgct atcttaagtc cgaccgcggc atatggcggt
     8581 agccttcaga cggcatagac aggcaaaacc atgctttcca acatcatccc cctttccatc
     8641 ggtgcggcac tcggtgcaac ggcgcgttgg ctgctcaacc tcgccgttcc tgccgccatg
     8701 tctcccgcca cgggcaacct gtttgccaac tggacgggcg cgctgctcat cggcatcttt
     8761 gccgaaacca tcaatcaccc gcaatggaag ctgctgctga ttaccggttt tctcggcagc
     8821 ctgaccacgc tttccggatt ttcactggaa accgtaaccc tgctccaatc gaatcgtcct
     8881 gcttcagcac ttgccaatat tttcctacac acggcaggtt cgctgctgct gacttggctc
     8941 gggctgaaga taggggcggc agtcaaataa ccgcaacaaa ttgcctccct ttgttttgac
     9001 ataatctata aattagcttc gcttgtttaa atactggctg tgcca
//
LOCUS       DAWGBY010000078         9035 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.078, whole genome shotgun sequence.
ACCESSION   DAWGBY010000078 DAWGBY010000000
VERSION     DAWGBY010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9035
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.078"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(171..863)
                     /locus_tag="WHG62_001466"
     CDS             complement(171..863)
                     /locus_tag="WHG62_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ1725558.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(971..2164)
                     /locus_tag="WHG62_001467"
     CDS             complement(971..2164)
                     /locus_tag="WHG62_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ1725559.1"
                     /translation="MSNQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2293..3030)
                     /gene="pxpA"
                     /locus_tag="WHG62_001468"
     CDS             complement(2293..3030)
                     /gene="pxpA"
                     /locus_tag="WHG62_001468"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ1725560.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3017..3946)
                     /locus_tag="WHG62_001469"
     CDS             complement(3017..3946)
                     /locus_tag="WHG62_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ1725561.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3943..4590)
                     /gene="pxpB"
                     /locus_tag="WHG62_001470"
     CDS             complement(3943..4590)
                     /gene="pxpB"
                     /locus_tag="WHG62_001470"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ1725562.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4774..6981
                     /gene="uvrD"
                     /locus_tag="WHG62_001471"
     CDS             4774..6981
                     /gene="uvrD"
                     /locus_tag="WHG62_001471"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ1725563.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQSGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVNVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASQEQGVSLWQAACNAGAK
                     AAKVAAFVRLIEALRNQVGQMPLPEIIAGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPDNISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7338..7877
                     /locus_tag="WHG62_001472"
     CDS             7338..7877
                     /locus_tag="WHG62_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ1725564.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRECGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8067..8282)
                     /locus_tag="WHG62_001473"
     CDS             complement(8067..8282)
                     /locus_tag="WHG62_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725565.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8290..8493)
                     /locus_tag="WHG62_001474"
     CDS             complement(8290..8493)
                     /locus_tag="WHG62_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725566.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(8406..8764)
                     /locus_tag="WHG62_001475"
                     /pseudo
     CDS             complement(8406..8764)
                     /locus_tag="WHG62_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
     gene            8817..>9035
                     /locus_tag="WHG62_001476"
     CDS             8817..>9035
                     /locus_tag="WHG62_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1725567.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIEN"
BASE COUNT         2272 a         2481 c         2237 g         2045 t
ORIGIN      
        1 tttcagttac agcagcttga tccctttccc ttatccaacg ggggaaggct aggatagggt
       61 ggcttgcaaa tatacagaac aagggacaag agccaccctc tctccaaccc tctccctccg
      121 tacgggaggg ggtggattct cgcgggcgaa gcccacgcta cggttagcct ttaccccagc
      181 acaaacaatt cccgcccgtg cgccttcagc caacttttag cattgtcggt atgcggcgtc
      241 agcgtgttca ccaaatgcca aaagcgcgga ctgtggtcgg ggtggcggag gtggcagagt
      301 tcgtggatgc agacatagtc ggcgacgtat tcgggcgtgc cgatcagccg ccagttgagg
      361 cggatgccgg tgtgcgggcg gcatacgccc caaaaggttt tggcgttgct caggtctgtg
      421 gcggtgggcg tcagtcctgt ttcggctgcg tgtttttcaa ggcggggcag caggtattcg
      481 cgggcgcgtt cgttcaacag gcggcgcagg tggtcgattt gtgcggcggt ttcttttcgg
      541 ggaagcagga tttcagacga cgtgatacgg atatggcttt ggctgtgggt atccagcttg
      601 gtctttattc cccgatacca aatccactcg ggtaagtttg ggtgggaaac aggatgcacg
      661 ggcgttttgg caagcgtgtt ccgcaaaatc gtttcgtttg ccgccagcca gtttgctaac
      721 gcgtggtctt gaaaaaaggg tgggacgttg atgctgaccg tctgcatatt gacggggcgc
      781 agaatcagat ttttcttggc actgcgtttg agttcgattt cgatgcacaa accgtcggaa
      841 agagtatagg tgaagcgttt catagttgtg aatgggtttc agaccggata catcgtctga
      901 aacaggaatt ttccatatca ggcggcaaac ttcggataat atacaaaatc aaacatctgc
      961 gctacaaggt tcagccgaac aagccgccga tatatttgct gatggtgatg gcgctgagta
     1021 ctgccatcaa accgaccaca atcacgccgg aaacggtgag ccacagcggg tgtttgtagt
     1081 cgccgacaat tttggttttg taggcggcaa tcagaatcag accgagggaa atcggtaaaa
     1141 tcaggccgtt taatgcgcct acgaacacca gcacctgcgc cggtttgccg atggtggaaa
     1201 atacggcggt ggacacggcg ataaaggcaa taatccattt gtttttattg cgttcgatag
     1261 acgggctgag accggagaag aacgacaccg aagtataagc cgcaccaatc accgaagtaa
     1321 tcgaagccgc ccaaatcacc acgccgaaaa tcagcaggcc gatgtatccc gccgcatatt
     1381 caaacggtgt ggaagcaggg ttgtcgggat tgagctgtac gccttggctg accacgccca
     1441 aaaccgccaa aaacaataca atccgcataa tcgaggcaat caggatcgcc cgcaccgagc
     1501 tttggctcac ttccggcaac gccgatttgc ctttgatgcc tgcgtccagc agacggtgcg
     1561 caccggcgaa ggtgatgtag ccgccgaccg tgccgcccac cagtgtaaca atcgccattg
     1621 catcgagttt ttccggcata aaggtatgca cggcggcatc tgccagcggc ggattcgcct
     1681 gccatgccac ataaaccgtc agcgcaatca ttacgaaacc catcacttgg gcgaatttgt
     1741 ccatcacttt gcctgcttct ttaaacagaa acacaccgat ggcaatcacg ccgctgatca
     1801 cggcaccggt ttccggcgac agtccggtca gcaggttcag acccaagcct gcgccgccga
     1861 cgttgccaat attgaacgcc aaaccgccca tcacaatcag cacagccaag aaatagcctg
     1921 cgccgggcaa gacctgattg gcaatatcct gcgcctgttt ttcggaaacg gcgacaatcc
     1981 gccaaatatt gagctgcgcc ccgatgtcga gcagaatcga gagcagaatc acaaagccga
     2041 aacttgccgc cagtgcttgg gtgaaggtgg cggtttgggt cagaaagccc gggccgatgg
     2101 cggaagtcgc catcaggaat gcagcgccga ttaaggcatt tctgcggttt ttttgattag
     2161 acataatcgc ttatcctcta taaaattggt tgttgctgtg tttgggcgaa acctgcggtt
     2221 ttagctacgc agaaactcgc tttgctcgtt ttggcgaaac ctgcggtttt cagacggcct
     2281 atgaactgtt tttcaagcag aaactttgat gcctgccgcc agtagttcct gccggatttt
     2341 ttcggcaaac accacggcgt gcggcccgtc tccgtgcaga cagatgctgt cggcttgcac
     2401 ggcaaccagg ctgccgtcca ctgctttgac ctgcccgtcc cgcaccatct gcaatacttg
     2461 ggcgatggct tcttcgtcgc tgtccacctg cgcatcgggg cggctgcggg gaaccagcgt
     2521 accgtcgggc atatagcggc ggtcggcgaa tacttcggaa atcacaccca agcctgcggc
     2581 ttttccggct tccaagagca ggctgccgga aagtgccatc aatttcaatt tcgggtcgaa
     2641 atccgccaca attcgggcaa cggtatccgc cagcgcacgg tttttcgccg cttggttgta
     2701 cattgcgccg tgcggtttga cataagccat ttccaaaccc tgatcacggc acaaggcctg
     2761 caatgcgccc aactggtaat tcagacacgc ccgcaaatcg gcttcggaca gattcatttc
     2821 ggtacggccg aagttttccc gatcgggata gccggggtgt gctccgatgc gcacgccgtt
     2881 ttgttgggca tacgccaatg ccgcccgaat atcggcaatg ctgccggcgt gttgggcgca
     2941 ggcgatgttg gccgaagtaa tcagctgcaa caaggcttcg tcgctgccgc agccttcggc
     3001 gagatcggcg tttaaatcaa cctgcttcat gggtgattct ccgtatttgg ttcagatagg
     3061 cttggttttt gcgccgcagg gcggtggctt ctttcaagcc gattattttg aatttgactt
     3121 tgctgccgaa gcgcacctgt gccagcctgc ccaaatcggc ggcggcaacg gtagcgattt
     3181 tcggataacc gccggtggtt tgcgcatcgg ccagcaggat aatcggtttg ccgccgggcg
     3241 gcacctgcac ggttcctgcc tgaacagcgt gggacagcat ttccaaaggt tgcgacaggg
     3301 tcagcggctg tccgtcgaag cggtagccca tgcggttgct atcgctttgc agcgtccacg
     3361 tttcccgttc cagattcaga cgcccttttt cactgaaagc ggcatattcc gacgaaggaa
     3421 caaggtggac ggtatcggta aacggtatcg gggcaatgcc gactttggac aattcctgcg
     3481 cacctttgcc gatggggaga taatcgcctt tttgcagcat tctgccctga tggccgccga
     3541 aaccggcttt caggtcggta cttctcgaac ccatcacttc cggcacatca aatccgcccg
     3601 ccacgcacac atagccgtac atgccctgca cggcacgcac cattttcaag gtctgccctt
     3661 tgcgggcggt ataacgccaa tacgaataga ccggttcgcc gtccaattcc gcctgataca
     3721 cggcaccggt gagacaaaac ggcgtatccc gttcaaacac cagcattatc ccgcccaaag
     3781 cgatttcgat tgcggccgtg ccttcgtcgt tgcccaataa aatattgccc gccgccaaag
     3841 caaccgtgtc catcgcaccg gcatgaccga tgccgtaacg ccggtgtccg tagcgtccgg
     3901 tatcctgaat atgcgccggt gcctgcactg ccgaaacgtg aatcatggct caatcctttc
     3961 tgcaacaaag cggacttggt cacccgccgc cagcagggtc ggcggattca aatcggctcg
     4021 gaacaagggt aattcggttc tgccgataat ctgccagccg ccgggcgaag cgaacggata
     4081 cacaccggtc tgactgccgc cgataccgac cgaaccggca ggaacggacg ttctcggcac
     4141 ggcacggcgg ggcgtgtgca atgcttcggg caagccgccc agataaggga aaccgggctg
     4201 gaagcccatc ataaatacgg tataagtttg cgccgtatgg cggcggacga tttcggaaat
     4261 aaccgtctga tggaaagcag cgacttccgc caaatccggg ccgtattcgc cgccgtagca
     4321 gacgggaatt tccaccagtt tgccctgatg gtctgtaacg gcggtgtgtt cccacacata
     4381 ttgcaattca tcggcaagcg tcgccaaatc ggtatcgaaa cgggtgaaca cggtcagatt
     4441 gttcatgccg accaccactt cctcaatcct gtcgtgctgc ccgagcgcag cggcaaacgc
     4501 ccacaacttt tgctgtttgc ccagttcgga aggtgcattc agtcggcaga ccaaagcgga
     4561 ttcgctgatt ggtgtgatct ctattctcat ttgttgttca ttttggttat gttttaatga
     4621 atctatatgc aggggcggcg gtttgtcaat atcttctgtg ctgcatcatc aaaccgtcga
     4681 ttggaaaagt gctgccctgc cgctgcactt tttcagacga ccttaaaccg tttctattaa
     4741 aatagcgcat tccacttttc agacggcatc cctatgtttc ccgaccaatc cgcccccaac
     4801 ctcctgcaag gcttgaatcc cgaacaactc tccgccgtaa cctggccgcc gcaatccgcc
     4861 cttgtgctgg cgggcgcggg cagcggcaaa acgcgcgtgc tgaccacgcg catcgcatgg
     4921 cttttgcaaa gcggacaagc cagcgtgcat agcattatgg cggtaacgtt taccaacaaa
     4981 gccgccaaag aaatgcagac ccgtttgggc gcaatgattc ccgtcaacgt ccgcgccatg
     5041 tggctcggca cgtttcacgg tctctgccac cgctttttgc gcctgcacca ccgcgacgca
     5101 ggcctgccgt cttcctttca aatcctcgac agcggcgacc agctttccct catcaaacgc
     5161 ctgctcaaaa gcctcaacat cgccgaagaa atcatcgcgc cgcgttcgct gcaaggcttt
     5221 atcaacgcgc aaaaagaatc cggtttgcgc gcttccgtct tgagcgcgcc cgacccgcac
     5281 acaagccgca tgatcgaatg ctacgccgaa tacgacaaaa tctgccaacg cgaaggcgtg
     5341 gtcgatttcg ccgagcttat gctccgcagc tacgaaatgc tgcaaagcaa cgaaatcctg
     5401 cgccagcatt accaaaaccg cttcaaccac attctcgtcg acgagttcca agacaccaac
     5461 aaactgcaat acgcctggct caaactcatg gcgggcggaa acgcagcggt atttgccgtc
     5521 ggcgacgacg accaaagcat ttaccgtttc cgtggcgcaa acgtcggcaa catgaccgcg
     5581 ctgatggaag aattccacat cgacgcgccc gtcaaactcg aacaaaacta ccgctccgtc
     5641 ggcaacatcc ttgccgccgc caatgccgtt atcgaaaaca acgacgaacg actcggcaaa
     5701 aacctgcgca ccgacgccga agcaggcgac aaaattcgct actactccgc ctttaccgac
     5761 ctcgaagaag cccggttcat cgtggacgaa accaaagccc tcgaacgcga aggctgggat
     5821 ttggacgaaa tcgccgtcct ctaccgtagc aacgcccaat cccgcgttat cgaacaaagc
     5881 ctgttccgca gcggcatccc ctacaaaatc tacggcggct tgcgctttta cgaacgccaa
     5941 gaaatcaaac acgccctcgc ctacctgcgc ctcgccgtca atcccgacga cgacaacgcc
     6001 ctcttgcgtg tcatcaactt cccaccgcgc ggcatcggtg cacgtaccgt cgaaaatctt
     6061 cagacggcat cgcaagagca aggcgtttca ctttggcagg cagcctgcaa tgccggcgca
     6121 aaagccgcca aagtcgccgc cttcgtccgc ctcattgaag ccctgcgcaa ccaagtcgga
     6181 caaatgcccc tgcccgaaat catcgccggc atcctcaaag acagtggctt gaccgaacac
     6241 taccgcaccc aaaaaggcga caaccaagac cgcctcgaca accttgacga actcgtcaac
     6301 gccgccatcg agttcaaacc cgaagacagc aactttgaaa ccctgcccga caacatttca
     6361 gacgaccccg ccttccccat cctcgctttc ttgagcaacg ccgccctcga atccggcgaa
     6421 aaccaagcag gcgcaggcga aaaagccgtc caactgatga ccgtccacgc cgccaaaggc
     6481 ttggaattca acgccgtctt cctcaccggc atggaagaag gccgcttccc cagcgaaatg
     6541 agccttgccg aacgcggcgg cctcgaagaa gaacgccgcc tcatgtacgt cgccatcacc
     6601 cgcgcccgca aacgcctcta catcaccatg gcgcaacaac gcatgctgca cggacaaacc
     6661 caattcggca tcgtctcccg cttcgtcgaa gagatcccac ccgaagtatt gcactacctg
     6721 tccgtcaaaa agaccgccta cgacagctac ggcagcccgc gccaaaccgc cgcatccaaa
     6781 gacaaaatca tcgacgacta caaacagccc caaacctacg caggtttccg tatcggacaa
     6841 aacgtccgcc acgccaaatt cggcaccggc gtgattatcg atgccgcaga taaaggcgaa
     6901 tccgcccgac tgaccatcaa cttcggcaaa cagggcgtga aagagttgga taccaagttt
     6961 gcgaaattgg aagcgatgta aatttgaaat gcaggctgga tactcgtatc cgacaaaaat
     7021 atttgacgcg tctatcgttt ccgaaaaacc gctgttggaa aatgtcggat tcgagaatcc
     7081 gacctatggc aaaaaactgt agcaaggaca aggcaaaagg ccgtctgaat ccggtaacaa
     7141 caaattttgc cgaaacctcc gccgtcattc ccgcgcaggc gggaatccag acctttcggc
     7201 acgggaactt atcggataaa aggtttcttt agattccacg ttctagattc ccgcctgcgc
     7261 gggaatgacg gacggtaaaa gccgggtata gatacctaac ccttgtttat agctgaaaat
     7321 caataaggaa gaacattatg tcccaagttt ttaaagattt tgatttgtcc tccgtatggg
     7381 aatccgacag ttgggcagat gaaaactaca aagaagcccc gtttacccct gaaattttgg
     7441 ctgccgtaga aagtgaactg ggctataaat tgccgcaaag ttttattgaa ttgatggcgg
     7501 tacaaaacgg cggaatattt gtcaaaaact gttttccgac cacacagaga aattcgtggg
     7561 cgaaagatca tgtgcaaatt tgcgaggtat cgggcatcgg ctttgaaaaa gaagggagtt
     7621 tgtgcggcga aacagggcaa aaactttgga tggaagaatg ggaatatccg cccatcggcg
     7681 tgtattttgc caacgacccg tcaggcggtc atgccatgtt tgccttggac tatcgggagt
     7741 gtggaaaaga cggcgagccg aaagtggtgt ttgtcgagca agaatcggat tttgaaatcg
     7801 tcgaacttgc ccccgatttt gaaaccttta tccgcagctt gcggcatgaa gatgagttta
     7861 ttgacgagga aatataaaac ggcggttgaa aaaccggaat catcaaggga aaacgggcga
     7921 aataacggat aatcgcttga atccgtaagg aaaacggttt ggtgaaacgc gccatccaag
     7981 acctttgcaa agaaaaactg tctccgacag cattgacatt attaacagaa cttatcaagt
     8041 ttggagctat ctcaaatata attcggttat ccttttgtat ccattaaatc atatgcttca
     8101 attaattgtt gttctagctc ttgtaccaat tttgaattgc gaattcctga cacaatctca
     8161 aattcttctg catctatgca aacacctgca taaatttcaa taacaaggga acgcaataat
     8221 tgaagctctt ctcttgttaa agaaataata atgtcatcac ctgtgtaatt gattatattc
     8281 ataataattt tatttttgtt tgtcaaagta agttttgcct aaggttggtc taaatgcagt
     8341 tccaccatct tttgaatttg ggtctctgat tacaattgct ccagacttat catcccaaat
     8401 tgctcttatg tgtttggatt gtaatcttcg aattcccaag aaaaaaatcg taataagttt
     8461 gaaagtgtca aatcccaagt ttcttttgag caatattcta atattttatc aatttcactt
     8521 ttaataatct tatgatcaaa ctgttctaat attaatgcat tagaccaaaa aaaccttctt
     8581 tattacaatg atgggaaatc catttaggag aacaaatgca aagtgaaaaa atagatgagc
     8641 cttgttctcc ttcgattccg atatccaaat ctatccatct atggaaatta tctggaattt
     8701 cgggggtaaa tttttcaaaa tcaatatcat ataaatttat gctttttaaa tccaatttaa
     8761 tcattagggc tgtcctagat aaatagggaa attcaaatta agttagaatt atccctatga
     8821 gaaaaagtcg tctaagccgg tataaacaaa ataaactcat tgagctattt gtcgcaggtg
     8881 taactgcaag aacagcaaca gagcctgaca gcattgttta tacggattgt tatcgtagct
     8941 atgatgtatt agatgtgagc gaatttagcc atttccgtat caatcacagc acacattttg
     9001 ctgaacgaca aaaccatatc aatggaattg agaat
//
LOCUS       DAWGBY010000079         9005 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.079, whole genome shotgun sequence.
ACCESSION   DAWGBY010000079 DAWGBY010000000
VERSION     DAWGBY010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9005
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.079"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(107..319)
                     /locus_tag="WHG62_001477"
     CDS             complement(107..319)
                     /locus_tag="WHG62_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725568.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGALQGRITFLNHPF"
     gene            complement(316..1371)
                     /locus_tag="WHG62_001478"
     CDS             complement(316..1371)
                     /locus_tag="WHG62_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ1725569.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDSFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            complement(1477..1959)
                     /locus_tag="WHG62_001479"
     CDS             complement(1477..1959)
                     /locus_tag="WHG62_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ1725570.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            complement(2006..3142)
                     /locus_tag="WHG62_001480"
     CDS             complement(2006..3142)
                     /locus_tag="WHG62_001480"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ1725571.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPNPNA
                     PAAEFADRHLCAPFDNQTALEELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHRGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQMAQRLADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTVDACAADQFQQQVRIMCNLPPADTKLLSPCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            complement(3139..3684)
                     /locus_tag="WHG62_001481"
     CDS             complement(3139..3684)
                     /locus_tag="WHG62_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEZ1725572.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKNREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTHQTGIRANT
                     QTDFSKFKGCLKDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            complement(3681..5156)
                     /locus_tag="WHG62_001482"
     CDS             complement(3681..5156)
                     /locus_tag="WHG62_001482"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ1725573.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTSDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSNPESEWQETQNKARAVIHAAQMVQEGLDK"
     gene            complement(5366..7276)
                     /locus_tag="WHG62_001483"
     CDS             complement(5366..7276)
                     /locus_tag="WHG62_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ1725574.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHELENGSSEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSL
                     VFEGNGRLKEYIGGYQDYIDAKSREAKIQTASAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALETEQAEINAQLSDPEIFKDYEKAGALQNRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            complement(7295..7939)
                     /locus_tag="WHG62_001484"
     CDS             complement(7295..7939)
                     /locus_tag="WHG62_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ1725575.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            complement(8103..8921)
                     /gene="opc"
                     /locus_tag="WHG62_001485"
                     /gene_synonym="opcA"
     CDS             complement(8103..8921)
                     /gene="opc"
                     /locus_tag="WHG62_001485"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HEZ1725576.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWLAKV
                     HADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTKSGDVSLTIPKTSIREYGLRVGIKF"
BASE COUNT         1928 a         1989 c         2573 g         2515 t
ORIGIN      
        1 gcgagaacgc tgtactggtt tttgttaatc cactataaat gttccgatac gaactgcaaa
       61 atattggttt tgtttctgac aggcaaaagc actgtttatt tggctgtcaa aagggatggt
      121 taaggaaagt tatgcgcccc tgaagcgcgc cccagataag gatggttgcg ccgacggctt
      181 cagacggcat tttggcggcg gtgttgggtt ttgtatccgg tttgccgttg tgtcttgtga
      241 tgatgatttt gggcgcggtt tttctgtttt gatgtgtgga atgccgtctg aaaggcggtt
      301 cagacggcat agcggtcatt tttgtgcggt caggcggtcg aatatgccgc cgtcggcgaa
      361 gtaggttttc atgatgttgt cccatccgcc gaatttttct tcgggagaga atgagtctaa
      421 gtctgggaag tcggctttgt gtcttgccaa tacttcgggg ttgcgggggc gcaggtagag
      481 tgaggcggcg agttcttgcg ccggttcgct ccaaaggtat tcgagatagg cgcgggcggt
      541 tttttgcgtg ccttttttcg cgacgacgct gttgacgacg gcgacggggc tttcggcgga
      601 aatggtgtag ctcggataga cgatttcaaa ctgtccttgg gtcagttttt tgctgacgta
      661 gttggcttcg ttttcaaaag taatgagtac gtcgccgatg ttgcgttgtg tgaaggtggt
      721 ggtggcggcg cgtccgccgt tttcaaaaac gggggtgttt ttgaggatgg atgcgacgag
      781 tttttgggct tcctgttcgt tgccgttggt ggttttcaga ccgtaaccgt atgcgccgag
      841 gaaggcgtag cgtccgttgc ccgaggtttt gggattggcg atgacgatgt taacgccgtc
      901 tttggcaagg tcgttccaat cgcggatctg tttggggttg ttttttcgga caaggaaaac
      961 catagtgctg gtgtagggcg cggcgtggtc ggggagggct tgttgccagc ctttttctac
     1021 cagtcctttt ttttcgagca ggtcgatgtc ggaggattgg ttcatggtta cgacatcggc
     1081 ttgaaggccg ttggctacgg ataatgcctg tttgctggag ccgccgtggg actgttggat
     1141 gctgacggat gtgccggggt gttcggattg gtatgttttg ataaataagg ggttgtattc
     1201 tttgtaaaaa tcccgtgcca catcgtatga ggcgttgagc agggtaatgt tttttccgtc
     1261 ggattcggta ttggccgggg cattttgtcc ggacggatgg tttgaatcgg ctgcggggct
     1321 gcaggcggtg agcagggctg cggtatagag tgccggtgcg taggttttca tatgcttgtc
     1381 ctgtcggttg gtagatgggg caactttata cggctgtctg cgcttgtgga aataatgttt
     1441 gatttgaaga ttatcagttt tggttataag gacggatcag aggtgtttcc gcatcagttc
     1501 gcatttgatt ttgatgctgg ggtcaagctg caatactgcc gaaccgagcg attcgtagcg
     1561 gttgagaagg taaaacggga ctgagttgag cgatgcgtag agtttcagaa agctcaaacc
     1621 ggatttgtgg gcgatggttt ccgcctgatg aagtagggca gtgcccagtc cgaggttgtg
     1681 gaacaggggg tggacgtaaa gtgcatcgag ttgtgcttct tggcagtcga tttggaaaaa
     1741 tccctgtatg ttgcctttgt attcggcaac ccaaagtgct ttgtcgggat cggaaatggt
     1801 cggcaggtag ctttctgtgt ttaacaagcc ttcccatact tttagggcgt gttcgttgta
     1861 gctgaggatg caggtgtatt ggacggagtg caggtggact ttgaagatgt ctttgcagtc
     1921 ttgcacggtg gcggggcgta acagtgtcag caggttcatg gcagtatgtc ggcggcttca
     1981 gacggcatct gtgccgttgg tcggattata gggactgatg cagttttttt gcttcttgaa
     2041 atgcggtgtc cgaatcggtg gttaaaacgg taaagtgtcc cattttccgc cctttgtgcg
     2101 cggttttttt gccgtaaagg tgcaggtgcg cgtccggccg gctttgcagg ggaaaccaat
     2161 ccggttcgcc gccgtcttcc tgccaaacgt cgcccaaaat attcgccata cagcaaggcg
     2221 ataataattt ggtgtcggca ggcggcaggt tgcacataat gcgtacctgt tgctggaatt
     2281 ggtctgccgc gcaggcatcg acggtatggt ggccggagtt gtgcggacgc ggcgcgattt
     2341 cgttgacgac caattcatgt gtgtcaccga caacaaacat ttctaccgcc aatacgccga
     2401 cataatccaa ttcgtccgcc aagcgttgcg ccatctgccg cgcctgttgc tgcacgtcgg
     2461 cactcagtcg cgcggggacg atggaataag ccaagatgcc gttttcgtgg atgttttcgg
     2521 caggatcgaa agtttgcacg ttgtcattgt tcagacggca tacgataacg gaaatttcgc
     2581 cgcgcaagtc caccattttt tccaaaacgc aatccacgcc gcggtgttcg gcaaacgcgg
     2641 ctttgagttc atccaccgtt tttacgcgga tttggccttt gccgtcatag cccaatgtag
     2701 cggttttcag gatgccgggc agaaattgta tgctttcttc agtgatgtct tcggctttgc
     2761 aaattgcttg atacggcgcg gtttgcaggc ctgctttgcg tatccatgcc ttttcctgaa
     2821 tgcggttttg cgcgatggca acgcagtcgc cgctggggga aacattggta tgtttggcga
     2881 gaaaacgcat cgcatcggca ttgacgtttt cgaactcggt cgtaacagcc gcacattttg
     2941 ccaattcttc caaagcggtt tggttgtcaa acggcgcaca caaatggcgg tcggcaaatt
     3001 ccgctgccgg cgcattcggg ttgggatcga gtacggttac tttgtagccc atggttttgg
     3061 cagcaacagt aaacattctg cctaattgtc cgccgccaag aatgccgagc atggcgggcg
     3121 gagaaagaga tatgtttttc atgctgactc ttcaaattgt acaagttgat agctataact
     3181 aattcttgac ggatgtcttg tatcgctgga attaccagtt tcagaaatac agaatacttt
     3241 ttccataaat ttttctgctt ttagaaattc cagtattctg tttttttcat ccttataagc
     3301 accgcggtct gtaccccatg caagaataat catatcggca tctttcaaac atcctttaaa
     3361 tttggaaaaa tcggtttggg tgtttgccct aattcctgtt tgatgtgtag agtaactgga
     3421 aaaaatattt aacattttga agttggtaaa accgtacata tccaagaaac gtgcaagttg
     3481 ggtaagggtt ttgtcgcttc tttcatcatt tgctttactt ggattaattc ctatagcgac
     3541 agctgagaaa tttttaggat tttctgtgtt gccgctccat ctaaccgtta ggatttctcg
     3601 atttttttca ttatctgtat agagaccgtc tttggtagtc ggtctgagtg tttggcgaag
     3661 ctcataaagt ttttcataag tcatttatcc aacccttcct gtaccatttg cgcggcgtgt
     3721 atgacggcac gggctttgtt ctgcgtttcc tgccattctg attcaggatt ggaatcggca
     3781 accacgcccg cgccgctttg gacgtatagc gtgttgtttt ttactacggc ggtgcggatg
     3841 gcgattgcca aatccatgtc gttgttgaaa ccccatacgc cgacggcacc gccgtagatg
     3901 ccgcgtttgc tcggttcgac ttcttcgatg atttccatgg cgcggacttt gggtgcgccg
     3961 gagagtgtgc cggcagggaa ggtagcggcg aggatgtcca tgttggtcat gccgtctttc
     4021 agacggcctt cgacgttgga aacgatgtgc attacatggg agtatttttc aatcaccatt
     4081 ttgtcggtaa ctttgacttc gccggtttta ctgatgcggc cgacgtcgtt gcgtcctaag
     4141 tcaatcaaca tgacgtgttc ggcgatttct ttggcatcgc ttaacaaatc ttgttcgttg
     4201 gcaaggtctt cggcgggggt tttgccgcgc aggcgcgtgc cggcgatggg gcggacgata
     4261 acgtcgttgc gttcgcgtcg gacgaggatt tcgggcgagg agccgacgat gtggaaatcg
     4321 ccgaaatcgt agtaaaagag ataaggcgaa gggttgagcg tacgcagggc gcggtagagg
     4381 gcgagcgggc tgtcggtgaa ttccatgctc atgcgctggc tggggacaac ctgcatgcag
     4441 tcgcctgcaa agatgtagtc tttgattttg ttaacgcagg ctttgaacgg ctcttcgccg
     4501 aattcgctga cggcttcggt gtgtttgctg ccgagcgaga gcgggatggc gcagctttgg
     4561 cgcaactggg tgcggatgtc ttcgaggcgt tcgcgggcgc gttcgtagcc gtcgggctgc
     4621 gacggatcgg cgtaaacgac gagatggatt ttgccgctca aattgtcgat caccgccaat
     4681 tcttgcgaca gcatcagcaa gatgtcggac gtgccgagcg ggtcggcttt ggtggtgttt
     4741 ttcaggcggt gggcgaagtg ttcgaaattg tagatggttt cgtaaccgaa gtagccgacc
     4801 agtccgccgg taaagcgcgg caggcttggg atttcgggtg ttttgaagcg gttgtggaag
     4861 gcttcgataa agggcagggg gttgccgtcg tgttgctcga caatttcgcc gttttgataa
     4921 acatcgacgt gtttgccgct ggctttgaga tagtggctgc aaggcaggcc gataaaagaa
     4981 tagcggccga aacgttcgcc accgacaacg gattcgagca ggtaggtata ggggcggttg
     5041 gcgagtttga gatagaggga aagcggcgta tccaagtcgg caaggagttc ttgcacgagc
     5101 gggatgcggt tgtagccttg ggcggcttgg gcttggtatt cttgtttgct gatcatttct
     5161 gctttcccaa aaggcggttt cggacggcgc ggtaatgggc gcgagtatag cattttatcg
     5221 gaattggtga cagtctgacc gagaggccgt ctgaagggtg cggcttgcgg cgcggcgtgt
     5281 ttttaaatgc ccgtcaggta cgcggagcgg gcattttgca ggcggcggct tcaggcttcg
     5341 ggcgcgtttt cccgccggca gggcttcaga cggcattgcc gttttgtttg gtttccagca
     5401 gctcccagcg ttccagcttt tccaaaagca gcatttcgat ttcttcggcg cggttttgca
     5461 atgcgccggc tttttcgtaa tctttgaaaa tttcaggatc ggaaagttgc gcgttgattt
     5521 ctgcctgttc ggtttccaag gcggcgattt catcgggtag ggcatcaagt tcgcgctgct
     5581 ctttgtagga cagtttgacc gtgcggttgg ctttgggttt ttctttcacc ggttcggcat
     5641 cggctgtttt gggtgcggat gccgtctgaa tcttcgcttc gcgtgatttt gcgtcgatgt
     5701 agtcctgata gccgccgata tattctttta accttccatt tccttcaaaa acaaggcttt
     5761 gggtaatcac gttatcgagg aacatacggt cgtgcgagac aaggaatacc gtgccttgat
     5821 aatcgcgcaa caggtcttcg agcagctctt gggtgtcgat gtccaagtca ttggtcggtt
     5881 cgtccaagac caaaatattg gcgggacggg taaagagttt tgccagcaaa aggcggttgc
     5941 gttcgccgcc ggagagtgaa gaaacaggac tttgagcgcg ggcagggggg aacaggaaat
     6001 cttccaaata gctcatcaca tgctttttct taccgccgac ttcaacgtaa tcattgccct
     6061 gtccgagcgt gtaaaacacg gtgtcgtttt cattcaacgc gctgcggaac tggtcgaaat
     6121 aggcgacttc ctgcttgctg ccgatacgga ttctgccgta ggtcggctgc aattcgccca
     6181 aaatcagttt taaaaatgtg gttttgccga tgccgtttgg accgattaag ccgattttgt
     6241 cgccgcgctg caagatggcg gagaatttgt ccataatgac tttgtcgcca taagcaaacg
     6301 aggcgtgttc cagctcggcg atgattttgc cgcttttctc gccgctgtcg agcttgaaat
     6361 tgacctgccc ttgtacgttg cggcgttcgg cacgctggcg gcgcagttct tccaaacggc
     6421 gcacgcggcc ttcgttgcgg gtacggcgcg cttcgatgcc tttgcgtatc cacgcttctt
     6481 cctgcgcgtg gaatttgtcg aagaggcggt tgtgttccgc ttcgactgcc aactcttgcg
     6541 cttttttctc gctatatttg gagaacgagc cgggatagga acgcaaaata ccgcgatcga
     6601 gttcgacaat ccgcgtggcg atattgtcca aaaaacggcg gtcgtgggta atcacaacca
     6661 agctgccttc aaacgctttg agcagatttt ccagccaaat aatcgcgtcg atatccaaat
     6721 ggttggtcgg ctcgtccagc agcaatacgt cgggcttttg cacccaagcc tgcgccaaag
     6781 cgacgcgctt tttctgaccg ccggagaggt tgccgatttt ttcgttttcc ggcaaaccga
     6841 gttcccccaa agtttgcttg actgccgcat ccagtttcca gccgtccttc gcttcgattt
     6901 caagttgcaa ttcgttgagc tctttcaaca aagcctcact cgaaccattt tccaactcat
     6961 ggctaacatg atgataacgg cgcaataaat cgcgaatttc gcctaaacct tcggcaacgg
     7021 tatcaaatac ggttgcgtcc ttatcaaaaa aggattcctg cggtacataa acgattttga
     7081 ggttgttttg aacaataatc tgcccgtcgt cgagcttttg cacaccggcg aggattttta
     7141 aaaacgaaga cttgcctgcg ccgttgcgtc cgatcaagcc gactttttcg ccgctgtcga
     7201 gttgaaaaga agttttgtcg agcaaggcaa cgtggccgat ggcaaaagaa gcgttttcta
     7261 cagataatat attcatgata caaattctca acagttaccg tttggatttt accgcaagtt
     7321 tggcgcgggc aatttcaacc gcacccggca ggacggaaac aataatgatg ccgcccatca
     7381 ccaagcccag attgtttttt acgacgggga agttggcaaa gaaatagccc gcgtaagaaa
     7441 acaggataac ccacaacaag ccaccgatga tgttgtagcg gataaatttg gcatagtgca
     7501 ttttccccat accggcgaca aagggggcga aggtgcggac gatgggtaca aaacgggcaa
     7561 tgatgatggt tttcccgccg tgtttttcgt aaaaacggtg ggttttatcg agatattcgc
     7621 gtcggaagat tttagaatcg ggattggcga acagcctgcc gccgaaatat ttgccgacgg
     7681 taaaattgag cgcgtcgccg agtatggcgg caaggcttaa taatgcaacc atcaaatgaa
     7741 tatccatacc gcccagcgcg gcaatcccgc cggcggcaaa cagcagcgaa tcgccgggca
     7801 gtaagggcgt aacaatcagg ccggtttcgc aaaaaacaat caaaaacaga atcgcataaa
     7861 tccacacacc gtattgcgcc gacagcgcaa gcaggtgttg gtcgatatgg aggatgaagt
     7921 cgatggcgga ggcaagcacg gcgcgttcct aaaaaaaaca aaccgcgtat tttaaccgat
     7981 tggaaaaatg ccgtctgaaa ttttcagacg gcatcggcta ttcaaattca tttcacgtaa
     8041 aaaccgcaaa ccaaaatagt ttgcggtttg gcatttaaag tgacaatgat gatttcaaat
     8101 catcagaatt ttatgccgac gcgcaagccg tattcacgaa tactggtttt cgggatggtg
     8161 agcgatacgt cgccactctt ggttgttaca ctaaactcgc cggattcttt gtaagtgcgt
     8221 tgtttgtaga acggccccgc ctcgatgctg gcggattcgc ccagtttttt accaatattt
     8281 gcacccaatc caaagcccca gccgttggtt ttttgattga tgtctttttt gagattggta
     8341 acgccggtgt ttaatttata gcgggaattg aggtcaaatt tcacttcaga ccaagggttg
     8401 atataccagc cgttacccag ttgggaaagc aaatccgcgt gaactttggc taaccacgac
     8461 tgacggctgc tgtgaagcgt atgcttggtg gttttaatgc tgtcttttga agattcaaaa
     8521 cccaagccgg cacccacacg gaaatttaaa gaatcactta acgtttgggt gtaggtgtag
     8581 cctgtgtaaa gatcgatacg gttttcagga acgccggtgg gcagttttac atttttagtc
     8641 ttacccagct tgttctcatc tgtttccaaa ttaataatat tttttttgct gcgcccgaaa
     8701 ccggcttcca agcggatgcc ttggttggca tcaaaaggaa tatcagcacg tacgccgatg
     8761 tgtttggcag ctttgtgttt ttctttcagg aaagcacgag ttgaagaaat ggaagagagg
     8821 tcggtgtgga cggtaaactc attagcggtt tgaagctctt gtgcagcggc ggcagtaccg
     8881 gtcagggcaa tcatggcaca tgtaaaaact gtttttttca tagttaaaat ctccaaaatt
     8941 tggattgtag tcggatatgg taacataacg taaataatcg ttacgcttac aattatattc
     9001 ttaag
//
LOCUS       DAWGBY010000080         8696 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.080, whole genome shotgun sequence.
ACCESSION   DAWGBY010000080 DAWGBY010000000
VERSION     DAWGBY010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8696
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.080"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..227)
                     /locus_tag="WHG62_001486"
     CDS             complement(<1..227)
                     /locus_tag="WHG62_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ1725577.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEQTSFNNLEPMTGFE
                     HTVTFDFQGIKMVIPYGYLARYTQDNATKWLS"
     gene            complement(665..940)
                     /locus_tag="WHG62_001487"
     CDS             complement(665..940)
                     /locus_tag="WHG62_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ1725578.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(937..2220)
                     /locus_tag="WHG62_001488"
     CDS             complement(937..2220)
                     /locus_tag="WHG62_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1725579.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDGELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGPFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(2368..3786)
                     /gene="glnA"
                     /locus_tag="WHG62_001489"
     CDS             complement(2368..3786)
                     /gene="glnA"
                     /locus_tag="WHG62_001489"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ1725580.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            4097..4906
                     /gene="aroE"
                     /locus_tag="WHG62_001490"
     CDS             4097..4906
                     /gene="aroE"
                     /locus_tag="WHG62_001490"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ1725581.1"
                     /translation="MHALPRYAVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIFLKNGKLRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSSGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            4908..5609
                     /gene="mtgA"
                     /locus_tag="WHG62_001491"
     CDS             4908..5609
                     /gene="mtgA"
                     /locus_tag="WHG62_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ1725582.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDAHFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(5934..6009)
                     /locus_tag="WHG62_001492"
     tRNA            complement(5934..6009)
                     /locus_tag="WHG62_001492"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5974..5976),aa:Phe,seq:gaa)
     gene            complement(6200..6934)
                     /gene="lptB"
                     /locus_tag="WHG62_001493"
     CDS             complement(6200..6934)
                     /gene="lptB"
                     /locus_tag="WHG62_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725583.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVTLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(7008..7538)
                     /gene="lptA"
                     /locus_tag="WHG62_001494"
     CDS             complement(7008..7538)
                     /gene="lptA"
                     /locus_tag="WHG62_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ1725584.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQGDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRNDKGEQFMKADGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNARVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(7519..8100)
                     /gene="lptC"
                     /locus_tag="WHG62_001495"
     CDS             complement(7519..8100)
                     /gene="lptC"
                     /locus_tag="WHG62_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ1725585.1"
                     /translation="MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSSKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(8097..8633)
                     /locus_tag="WHG62_001496"
     CDS             complement(8097..8633)
                     /locus_tag="WHG62_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ1725586.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
BASE COUNT         2058 a         2308 c         2232 g         2098 t
ORIGIN      
        1 gaaagccatt ttgtggcatt gtcttgcgta taccgtgcaa gatagccata agggataacc
       61 attttgatgc cctgaaaatc aaatgtaacc gtatgttcaa atcctgtcat tggctcgaga
      121 ttgttgaaac tggtttgttc attaacaggt tcacatgagg tcatagtaaa aacactccca
      181 ataaacaaaa taaaaagttg ataaatggta gtagcatatg gtctcataat ttcaagctta
      241 gaaattagtt aaagaatata ttcatggtag atactaactc tttaagttga catattgtgc
      301 gatgtcgagg gctgtaccgt attttcccat cgtattttcc catcgtattt tcccatcgta
      361 ttttcccatc gtattttccc atcgtatttt cccgttcttt atatgagcgg caggcatcct
      421 cataaaagaa gggataccga taaggaaaaa taccccagca taaaaaatat actgattaat
      481 caatacaaat ccaacaaaca gttcatcgta ttcttttctg ttggcgtata aaaatactga
      541 tatattcctt cactttcata gggcgacgct ttatgtaccg tcctgtgtgt tgaaacgtcg
      601 gttttcctta ccgcctgccc cgcttttccc tgattgctgc caactgccgt ccgaacttga
      661 accgtcaggt ttcagacggc attttttctg cctgctccca caattgccgt ttttgtgcgg
      721 cggtcagttt tttgacggcg atttcctgcc tgagtgccgt gcctttatcc atcccgcctg
      781 caacgatacg catcgccacc ggtttgaata cgcgggtata tttcgcgcct ttaccggttg
      841 tgtgggcggc aagccgctgt tgcggattcg ggctgatgcc gcaatagaac gcgctgtttt
      901 cacacaatat caggtaaacg ctccagtttg acgcgttcat ctgcctgcat cctgagtttt
      961 ctccccgttc caaggcgcaa ctttcagcag cagcagcata cccggtaggg cgagtgcgaa
     1021 acacagttgg aaaaacggta cataaccgag ccattcaatc agataaccgg caaaggaatt
     1081 gatgaccgtg cgcgggacgg cggacaggct ggtaaacagc gcaagctgcg ttgcggtaaa
     1141 tgcgggattg gtttcacgcg ccatatacga tacgaacgcc gccgtcccca accccacgcc
     1201 gaccgcttcc gcgccgataa ctgccgccag catcagcctc tcgcctgtgc cgaccgtgtc
     1261 gaaaggtccg aaccctgcca gccatacaaa ccccaaaacg gttacagcct gcaccgcgcc
     1321 aaatagccac aaggctttgt ttacgccgat tttcagcatc cacacgccgc ccaagatacc
     1381 tgccgccact gccggccaca gtcctgcatt tttcgcaatc aaaccgatgt ctgtcttgct
     1441 gaaacccata tccagataaa acggcgttgc caacgcggtt gccatactgt cgccgagttt
     1501 gtaaaggaag ataaacagca gcacgcacac cgccgaagcg atgcccttgc gcgtaaaaaa
     1561 ttctttaaac ggctctacca cggtctgctt caacgtttta ggaacggcag gcggcaacac
     1621 gggttcgcgc gcaagaaaca gcgtcatcag aaggccgggc agcataaata atgaagtgat
     1681 aacaaatact tctgaccacg gcatcctgtc tgccaacacc aaactcaatg aaccgggaat
     1741 cagggcggca acccgatagg cgttgacgtg aacggaattg cccaaaccca attctccgtc
     1801 cgacaaaatc tcgcgcctga acgcatccaa tacaatgtcc tgactggcgg aaaaaaaagc
     1861 gacaagcacc gacaagccgg caatcagcgg cagatgattc cgagggttta aaaaggcata
     1921 tgccgccaaa gccgccagca accctgcctg cgtcagcagc atccacccgc gccgccgccc
     1981 caaaacgggc agcctgaccg cgtccatcag cggcgaccac aaaaatttcc aagtaaacgg
     2041 cagaccgatt aacgccatca gcccgatgct ttttaaatcc acctgctcgc tgcgtaacca
     2101 cgccggaatc aggttaatca gaaagtacag cggcagcccc gaggtaaacc ccgtaaaaat
     2161 acagacaagc atattgcggg aaaagatttg cccgataaaa cctgatttcg atgcagtcat
     2221 cgttcgtgca gccaaaaaac aaaagcctat tgtagcaaat atcgcccgcc tgctgaaaaa
     2281 cgccgcgccg ccgttttgcc gttccaatgc aaaatgccgt ctgaaactgt gttcagacgg
     2341 cattgctttt ctgaaaaccc gacgtgctta caggctgtaa tacatttcaa attccagcgg
     2401 atgcggcgcc atgcggatgc ggcggacatc ttcctcttta aaggcgatgt agctgtcgat
     2461 ccagtctttg ctgaacacgc cgccgcgcag caggaattcg tggtcggctt tgagggcggc
     2521 gagtgcttct tccaaagaag cgcagacggt cgggacgagc gcgtcttctt ccggcggcag
     2581 gtcgtagagg tttttatcgg caggatcgcc cggatggatt ttgttttgaa taccgtccaa
     2641 acccgccatc aacagggcgg caaatgccaa atacgggttg gcggtcggat cggggaaacg
     2701 cgcttcgatg cggcgcgcct tgctgctgtt cacggacgga atgcggatgg aagcggaacg
     2761 gtttttggcg gagtatgcca gtttggtcgg cgcttcaaag tgcggcacga ggcgtttgta
     2821 ggagttggtg gacggattgg taatcgcgtt caaggctttg gcgtgtttga tgatgccgcc
     2881 gatgtagtag agcgcggtgt cgctcaagcc ggcatagccg tcgcctgcga acaggttttg
     2941 accgtctttc caaatggatt ggtgaacgtg cataccgctg ccgttgtcgc ccataatcgg
     3001 tttgggcata aaggtggctg ttttgccgaa gttgtgggca acgttttgaa tcacatattt
     3061 catgtcttgg gtttggtcgg cgcgtttgac caaggtggcg aaacgcgtgc cgatttccat
     3121 ttggctgccg gtaccgactt cactgtggtg gacttcgact tcgatgccga gttcttccaa
     3181 aatgtttacc atcgcggagc gcaggtcttg tcccgcgtca atcggagcaa cgggcgcgta
     3241 accgcctttg acggcagggc ggtggccggt gttttgaccg tccatgtgca ggccgcttgc
     3301 ccatgcgccg ctttcggaag tgatttcgta acgggttttg tgcatgtcgg tttcaaattc
     3361 tacgccgtcg aagacgaaga attcaggctc ggggccgaag tatgccgtgt cgccgatgcc
     3421 ggaagatttc aaataggcct cggcgcggcg tgcgatggag cgcgggtcgc ggtcgtaacc
     3481 ctgaccgtcg gcagggtcga tgacgtcgca ggtaatgacg acggtaacat catcataaaa
     3541 aggatcgacg aaagctgtag acgcatcggg gcgcagctgc atatcggaag cctgaatgcc
     3601 tttccagccg ccgatagacg aaccgtcaaa cgcctgaccg ttttcaaacc actcttcggg
     3661 gtcttccaac acgatgcgcg caggcacggt aaagtggtgc tgcttgcctt tggtatcggt
     3721 aaagcgcaaa tcgacaaagc gggcttcgct ttcttcaatc aattttacgg cgtttttaat
     3781 agacattttt cagctcctgg aaaagggaaa tagcaaaata tgcggaacgc ggcggcttga
     3841 cgcaaagtcg gcacgattct accacgtcca tgccgtctga aactggccct gcgtcaaatt
     3901 ccaagctgta aaatatagtt tcagacggca agattgtcaa caatatgctt ctgtttgtct
     3961 gttcaaaagc ggaatacccg cccttttgtc cgaatgccga caaaacagat gccgcctgaa
     4021 agcagttcag acggcatcgt tcccatcttc gcgccgccgt tataaaatga ccgccccgcc
     4081 ttgatggaat atgactatgc acgccctccc ccgctacgcc gttttcggca accccgtcgc
     4141 ccacagcaag tcgccgcaaa tccatcagca gtttgccctt caggaaggcg ttgacattga
     4201 atacgaacgc atttgcgccg acatcggcgg tttcgcgcag gcggtttcga cattttttga
     4261 aacaggcggt tgcggggcaa acgttaccgt accgttcaag caggaagcgt ttcatctggc
     4321 ggacgagcat tctgaacgcg cattggctgc cggcgcggtc aacacgctga tttttctgaa
     4381 aaacggaaaa ctgcgcggcg acaataccga cggtatcggt ttggccaacg acatcacgca
     4441 ggtcaaaaac attgccatcg aaggcaaaac catcttgctt ttgggcgcgg gcggcgcggt
     4501 gcgcggcgtg attccggttt tgaaagaaca ccgccctgcc cgtatcgtca ttgccaaccg
     4561 tacccgcgcc aaagccgagg aattggcgca gcttttcggc attgaagccg tcccgatggc
     4621 ggatgtgaac ggcggttttg atatcatcat caacggcacg tccagcggtc taaacggtca
     4681 gattcccgat attccgcccg atatttttca aaactgcgcg cttgcctacg atatggtgta
     4741 cggctgcgcg gcaaaaccgt ttttagattt tgcacgacaa tcgggtgcga aaaaaactgc
     4801 cgacggactg ggtatgctag tcggtcaagc ggcggcttcc tacgccctct ggcgcggatt
     4861 tacgcccgat atccgccccg ttatcgaata catgaaagcc atgtaatatg ttccgcatcg
     4921 tcaaatggct gattgccctg cccgtcggca tctttatctt tttcaatgcc tatgtgtacg
     4981 gcaacatcat tacctaccgc gccgtcgcgc cccatcggac tgcctttatg tcgatgcgga
     5041 tgaagcagtt tgaacaggaa ggtcgcgatg tcgcactgga ttaccgctgg gtgccctaca
     5101 accgcatctc ggtcaacctg aaaaaagccc tgattgcttc cgaagatgcc cattttgccg
     5161 ggcacggcgg cttcgattgg ggcggcattc aaaacgccat caggcgcaac cggaacagcg
     5221 gcaaagtgaa ggcgggcggc tcgaccatca gccagcagct tgccaaaaac ctgtttttaa
     5281 acgaaagccg cagctatatc cgcaaaggcg aagaagcggc gattaccgcg atgatggaag
     5341 ccgttaccga caaagacagg atttttgaac tgtatttaaa ctcaatcgaa tggcactacg
     5401 gcgttttcgg cgcggaagcc gcgtcccggt atttttatca aatacccgcc gccaagctga
     5461 ccaaacagca ggcggcaaaa ctgacggcgc gcgtccccgc cccgctctac tacgccgacc
     5521 atccgaaaag caaacggctc cgcaacaaaa ccaatatcgt gctcagacgc atgggttcgg
     5581 cagagttgcc tgaaagcgac acggactgat tgtttcagat atggaaatgc cgtctgaact
     5641 gcggttcgga cggcatatgt tttctggttt ttatagtgga ttaacaaaaa tcaggacaag
     5701 gcgacgaagc cgcagacagt acaaatagca cggaatcgat tcacttggtg cttcagcacc
     5761 ttagagaatc gttctctttg agctaaggcg agccaacgct gtaccggttt aaatttaatc
     5821 cactatacct gcccgacagc cgcaaagacc gtatcataca tagcaggcat tgcggtgcgg
     5881 gattactgcc gcaaacggca ggcaaaaaaa ataaccgctt caaggcggtt ttttggtggc
     5941 cagaggcgga atcgaaccgc cgacacacgg attttcaatc cgttgctcta ccaactgagc
     6001 tatctggcct ttgtctgtct cgttaagaga tgcgtattaa accaaattac gggacgacat
     6061 gcaagcatat cgggcaatat tctttgaaaa caggtttaag tcaatgtttt aaatttgaat
     6121 taatttatgt aaaaacaaca taaatccgta tttttgccgc ctgcccgacg atattaggtc
     6181 gcccgtctga aaaatatttt caatatttaa agttcttacc cagataaaca gaacgaacct
     6241 gttcgtttcc gaccaaatca tcaggttttc ccgatgccaa caccgtgccg tctgaaataa
     6301 tgtaggcccg atcgcagatg ctgagggttt cgcgtacgtt gtggtcggta attaatacgc
     6361 cgataccgcg cgacttgaga aatccgatga ttttttggat gtcgatgacg gcgatgggat
     6421 cgacgccggc aaaaggctcg tccaacaaaa taaaatgcgg tttcatggca agtacgcggg
     6481 cgatttcgac gcgtcggcgt tcgccgcccg acaaagatgg ggcaggatta ttgcgcaaac
     6541 gctcgatatt caggtcggca agcagttttt caacttcgcc gtcgatgcgg cttttgtctt
     6601 tggtactgat ttctaaaatg gcgcggatgt tttgttcgac ggtcatttta cggaaaatag
     6661 aggcttcctg cggcaggtag ccgacaccga ggcgggcgcg ttcgtgtatg ggcaggtggc
     6721 gcaattcttg tccgtctagg gttacgctgc ctgcgtcggc ggcgatgagt ccgacaatca
     6781 tgtagaagct ggtggtttta cccgcgccgt tgggcccgag caggccgacg acttctccgc
     6841 tttcgatttc gagggagaag cttttaacga cttggcgttt tttgaaactt ttttgcaggt
     6901 tttgaacaac aaggcggctg acgtttgcgc tcataaatat ctcttcaata tcttcggtcg
     6961 gcaaatgccg tcggaaccgg gtttatgttt cagacggcat tttgggatta ttcggatttt
     7021 tgcgtactcg aaggctggat aacgacgctg actctgccgg atttggaagc ggattttgcg
     7081 ccggattttg tgctgccgct gatggtatag acttcggttt tggtgttgta tgtaatcacc
     7141 gcgccttcgg cgacatcgcc gccgcgctgt actctggcat taccggttaa gactacggtg
     7201 ctgcctgcag acgaataagc aacgttgttt gcctgaccgc gcaccgtccc tttgcccccg
     7261 tccaacgttt ggctgaagcg cacgggcgag ccgtcggcct tcataaactg ttcgcctttg
     7321 tcattacgcg ttacgttgac gcgggcggcg gaaatattga gcgtaccctg tctgatgaca
     7381 acgtttccgc taaatgtggt gctttggttg gcttgatcga gcgaaccttg gtcggcctca
     7441 atctgaatag gctgcctgct gtcgccttga agggcaaaag cgggagatgc cgaaaaaaat
     7501 gctattaaaa caaatagctt acatatcttt tgtatcataa atcgtggctt tcactttaga
     7561 tgagaagttc aacatgcctg ttttgtggtc gtaagtcatg ccgcccgcct gaccgtgcga
     7621 tgcaccatat tggaaactga caggcgtatc ggtttgggca tattgagatt cggtatcgac
     7681 gtgcagcttt tcggcttcaa ctttacccgc ctgccgtttg ccgtcggcgg ttttggtcag
     7741 cacaacgttg tttttaaaaa gaacctgttt gttttcggta tggtaaacgg cttcatcgct
     7801 gccgacttcg tacaacaacc tgccttcttg gaagaacacg agatgcggtg agtcgaaatg
     7861 aatgtcgctg ctttcgggaa actgtttcgc gcccttcgaa ctcaaatgtt ctttcaagta
     7921 tccctgttcg tcaaaccgcc tgccatccaa tccgtccatt gtgtattgcg gttcgtcggg
     7981 attgagcctg acttcttcaa tctcgacttc gctgatgcgt cccaaccatg ccgacaggct
     8041 gcccaaggca accgccaata tcaatgggaa cgcaattccg taccgccatc ttactttcat
     8101 ttgatgtact cgttcaaagc cgcgcccaaa gtcccttgcg cctgcataat caggtcgcac
     8161 acttcgcgca ccgcgcccgc accgccgggg cgtttggcaa tataggcggc gtgttgcagc
     8221 gtaaaccaat gcgcgtcggg gacggcaacc ggcaatccgc agcgtaccat aacgggcaaa
     8281 tcgaccacgt cgtcgccgac aaaggcacac tcggcttctt ccacgccgac ctgagcgcgc
     8341 agctcttcat acgcggcgcg tttgtccgaa atgcctttga agtagtaatt tatgcccaac
     8401 tgtttgacgc ggatgccgac ggagggcgcg tcccgacctg tgataatcgc agtctgcacg
     8461 ccgcttgcct gaagcatttt cagaccgtgt ccgtccagtg tgtgaaacga tttgatttct
     8521 tcgccgttat cgcggataaa gatgcgcccg tcggtcaaaa cgccgtccac atccaggatc
     8581 aacagtttga ttttggcggc gcgcgcctgt aattcgggag aaattgcctg catgggattt
     8641 ccttgttttc agacggcata tcttaccaca aatgccgtct gaaacggctg caacgc
//
LOCUS       DAWGBY010000081         8538 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.081, whole genome shotgun sequence.
ACCESSION   DAWGBY010000081 DAWGBY010000000
VERSION     DAWGBY010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8538
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.081"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(77..595)
                     /locus_tag="WHG62_001497"
     CDS             complement(77..595)
                     /locus_tag="WHG62_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ1725587.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(615..2000)
                     /locus_tag="WHG62_001498"
     CDS             complement(615..2000)
                     /locus_tag="WHG62_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ1725588.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KTIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            2239..3780
                     /locus_tag="WHG62_001499"
     CDS             2239..3780
                     /locus_tag="WHG62_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ1725589.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRCAVSDKAVSPVMPSPPQSVGEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLAAFALGIFLLLDGGEGGK
                     RTETL"
     gene            3809..4408
                     /locus_tag="WHG62_001500"
     CDS             3809..4408
                     /locus_tag="WHG62_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ1725590.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            4405..5010
                     /gene="nadD"
                     /locus_tag="WHG62_001501"
     CDS             4405..5010
                     /gene="nadD"
                     /locus_tag="WHG62_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ1725591.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRNLASQGVSDGIPPAAARYIREHGLYEK"
     gene            5069..5455
                     /gene="rsfS"
                     /locus_tag="WHG62_001502"
     CDS             5069..5455
                     /gene="rsfS"
                     /locus_tag="WHG62_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ1725592.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            5509..5979
                     /gene="rlmH"
                     /locus_tag="WHG62_001503"
     CDS             5509..5979
                     /gene="rlmH"
                     /locus_tag="WHG62_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ1725593.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE"
     gene            6054..6320
                     /locus_tag="WHG62_001504"
     CDS             6054..6320
                     /locus_tag="WHG62_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ1725594.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWMAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            6477..7160
                     /locus_tag="WHG62_001505"
     CDS             6477..7160
                     /locus_tag="WHG62_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ1725595.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMIFTFGMGVLIGPVLQY
                     ALHIADGTKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            7284..7796
                     /gene="coaD"
                     /locus_tag="WHG62_001506"
     CDS             7284..7796
                     /gene="coaD"
                     /locus_tag="WHG62_001506"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ1725596.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWMETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            7828..8484
                     /locus_tag="WHG62_001507"
     CDS             7828..8484
                     /locus_tag="WHG62_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ1725597.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNKESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFDYQNRQIEIVAPLKNEWQTENIHRALEEFCMENKID
                     "
BASE COUNT         1863 a         2262 c         2497 g         1916 t
ORIGIN      
        1 aatgtaatcc attctgttcc cgatgtttat gccgtctgaa acccatcctg tgtcgggctt
       61 cagacggcat attgcttcaa agcaggtttt ccgaggcaac ccagttcaga atatcggctt
      121 cgaccgcttc gggcgtgccg gggttggcga ttttgactcc gtattcgcct tcgcccagtt
      181 cctcgaggat ttccagttgc gaatcgagca tccctgcttt catgtaatgt cctttgcgcg
      241 acatcatgcg ctcgaggttg atgtcttgcg gcggactgag gtggatgaag gcagctttgc
      301 cttcggctcc gcgcagaatg tcgcggtagc cgcgtttgag ggcggaacag gttacgatgg
      361 tgtggttcgc accgttttgc gcctgtttcg tcatccagtc gcgcagattg cccaaccacg
      421 gatagcggtc ttcatcggtc agcggaatac ccgcgcccat cttgtcgcgg ttggcttggg
      481 tgtggaactc gtcgccttcg gcatagggac attgaccgag gtgtttctgc agggacagcg
      541 cggcggtggt cttgccgcag ccgcatacgc ccataacgac aaaatgcgta gtcatttact
      601 atcctttccg tctgtcagac gatggcgaac agcagtgcgg acaaggcaaa gccgatgagt
      661 gcgatgaggg tttggttgac cgtccaggtt ttcagcgtgg tcggtacgtc catgtccaag
      721 aggcggccga ccagccagaa gccggagtcg ttgaagtggc tgcaaccgac cgaacctgcc
      781 gccgttgcca atacgataca ggcgagctgc cagtcggtaa agccggcggc ggcaacggca
      841 ggagccatca gcgcggcggc ggtggtcagg gcgacggttg ccgaaccttg cgcgatacgc
      901 agtgccaagg cgacaaggaa acagcccaaa aggacgggaa tgcccaaatc cgccatgctg
      961 tcggcgagtg ccttgccgat gccggaagcg cgcaaaacgc cgccgaacat accgcccgcg
     1021 ccggtaatca gaatcacgga acagacgggg gcgagtgcgc cgtccacggt tttttccaac
     1081 gcgctgccgc tttcgccgcg tttgcgtccc aagacaaaca gtgcgaccaa tacggaaatc
     1141 agaagggcga tcggtgtcga accgattgtt tttgccgtct gaacccaggt ttcgtccgca
     1201 cttacgagtt tttcgctgat gagggccgat acgccggtat tcaggaaaat cagcagcatg
     1261 ggaatcagca tgatggcgac gaccgttcct gctttggcag gttctttcgg caggtcgttg
     1321 tcttgcgtgc cgccgctgag cagttcggga acgggaacat ggatggtgcg ccccaacact
     1381 ttgccgagca tatagccgct gaaataccat gtgatgaagg cggtcggcag acccaaaatc
     1441 aaaacttggc cgatgttcgc gccgtaaaat tcggaagcgg caatcgggcc cggatggggc
     1501 ggcaggaaga cgtgcatgac ggaaaatgcg ccgatggagg caagcgcgaa gggcagtacg
     1561 tcctgtttca tgcgccgtgc ggtggcgaac acgatgggca gcatgacgat tagtccggca
     1621 tcgaagaaaa tcgggaagcc gaaaatcagc gaggcaacgc ccagcgcgaa cggtgcgcgt
     1681 ttttcgccga acatccggat cagcgcgtcc gccagcgact gtgcgccgcc ggatgtttcg
     1741 accaaacgtc cgagcatcgc gcccaggccg accagaagcg ccacgccgcc gagcgtgccg
     1801 ccgaagtttt tgaccagtac gtcgttgaca atgctgcctg tgggcaaacc ggttgccaaa
     1861 gccgtcagca ggctgacgat gaccagtgtc agcagcgcgt ggatgcggaa tttgacgatt
     1921 aaaatcagaa tgaggatgat tgccgccgcc gaaatgccca acagggtttg cgcggacagc
     1981 gtctgtgtcc agccgtccat ttgtaaagcc tttctctgta ataaaagtac aaaattgtca
     2041 ggttttttta agttgtgcga aaacgatagc acaaatcggg cggtaagttg tttgtctgaa
     2101 gttatattcc tgtttatttg aacgatttat ttcagacggc gggaggaagg cggatacggt
     2161 atgtagtcgg attgaaatat acggtatgtg gggcttttgg gtacaatcgc aacatcagtg
     2221 tttcaagtgg ggaaggcgat ggatggacgg cgttgggcgg tatggggtgc ttttgccctg
     2281 ctgccttcgg cttttttggc ggtaatggtc gttgcgcctt tgtgggcggt ggcggcgtat
     2341 gacggtttgg cgtggcgcgc ggtgctgtcg gatgcctata tgctcaaacg tttggcgtgg
     2401 acggtatttc aggcagcggc aacctgtgtg ctggtgctgc ctttgggcgt gcctgtcgcg
     2461 tgggtgctgg cgcggctggc gtttccgggg cgggctttgg tgctgcgcct gctgatgctg
     2521 ccttttgtga tgcccacgtt ggtggcgggc gtgggcgtgc tggctctgtt tggggcggac
     2581 ggcctgttgt ggcgcggacg gcaggatacg ccgtatctgt tgttgtacgg caatgtgttt
     2641 ttcaaccttc ctgtgttggt cagggcggcg tatcaggggt ttgtgcaagt gcctgcggca
     2701 cggcttcaga cggcacggac gttgggcgcg ggggcgtggc ggcggttttg ggacattgaa
     2761 atgcccgttt tgcgcccgtg gcttgccggc ggcgtgtgcc ttgtcttcct gtattgtttt
     2821 tcggggttcg ggctggcatt gctgctgggc ggcagccgtt atgccacggt cgaagtggaa
     2881 atttaccagt tggtcatgtt tgaactcgat atggcggttg cttcggtgct ggtgtggctg
     2941 gtgttggggg taacggcggc ggcagggttg ctgtatgcgt ggttcggcag gtgcgcggtt
     3001 tcggataagg cggtttcccc tgtgatgccg tcgccgccgc agtcggtcgg ggaatatgtg
     3061 ctgctggcgt ttgcggcggc ggtgttgtct gtgtgctgcc tgtttccttt gttggcaatt
     3121 gttgtgaaag cgtggtcggc cggcgaatcg tggcgtgtgt taatggaaag tgaaacgtgg
     3181 caggcggtgt ggaatacttt gcgcttctcg gcggcggcgg tgtatgcggc ggcggttttg
     3241 ggtgtggtgt atgcggcggc ggcgcggcgg tcggcgtgga tgcgcgggct gatgtttttg
     3301 ccgtttatgg tgtcgccggt ttgtgtttcg gcgggcgtgc tgctgcttta tccgcagtgg
     3361 acggcttcgt tgccgctgct gctggcgatg tatgcgctgc tggcgtatcc gtttgtggca
     3421 aaagatgttt tatcagcctg ggatgcactg ccgccggatt acggcagggc ggcggcgggt
     3481 ttgggtgcaa acggctttca gacggcatgc cgcatcacgt tccccctctt gaaaccggcg
     3541 ttgcggcgcg gtctgacttt ggcggcggcg acgtgtgtgg gcgaatttgc ggcgacattg
     3601 tttctgtcgc gtccggaatg gcagacgctg acgactttga tttatgccta tttgggacgc
     3661 gcgggtgagg ataattacgc gcgggcgatg gtgctgacat tgctgttggc ggcgttcgcg
     3721 ctgggtattt tcctgctgtt ggacggcggc gaaggcggaa aacggacgga aacgttataa
     3781 tgcgaaccct tttttagagg acggcaaaat gagcgagttg gataacatcc ttgcccataa
     3841 ccggcagttt gtcgagtcgg gcgaatatga aaaatacttt accgacaaat accccgaacg
     3901 cgggctggca gttttgtcct gtatggatgc gcggattatc gggctgctgc ccgacgcgtt
     3961 gggtttgaaa aacggcgatg ccaagctgat taaaaatgcc ggcgcgctgg ttacgcaccc
     4021 gtggggttcg gtgatgcgga gccttttggt tgccgtgttt gaactgaagg tcagagagat
     4081 tatggtcatc gcccatcacg attgcggtat gcaggggctg aatgccgaag aattcctcgg
     4141 gcgcgtccgg gaaagccgga ttcccgaaga ccgtatcgaa accctgcgtt atgccggtat
     4201 cgacctcgac ggctggctga ccggtttcga caacgtcgaa gacagcgtgc gccacacggt
     4261 ggaccttatc cgtaaccatc cgctgatgcc gcgccatatc gccgttcacg gactggtcat
     4321 ccatcccgtt accggcaaac tgacgctggt tgtggacggc agtgtttcag acggcatgga
     4381 cttatcggaa ggaatggaaa catcatgaag aaaatcggac tgttcggcgg cactttcgac
     4441 ccgatacaca acgggcatct ccacatcgcc cgcgcctttg ccgacgaaat cggcttggac
     4501 gcggttgttt tcctgccgac aggcggcccg tatcacaaag acgcagcctc cgcttccgcc
     4561 gccgaccgcc ttgccatggt cgaactggcg acggcagaag acgcgcgttt tgccgtcagc
     4621 gattgcgaca tcgtccgaga aggtgcaacc tatacttttg ataccgtcca aatcttccgc
     4681 cagcagttcc catccgcgca actctggtgg ctgatgggca gcgacagcct gatgaagctg
     4741 cacacatgga aaaaatggca gatgctcgtg cgcgaaacca atatcgccgt cgccatgcgg
     4801 cagggcgaca gcctgcacca aaccccgcgc gaactgcacg cgtggctggg caagtccctt
     4861 caggacggca gcgtccgcat cttgtccgcc ccgatgcata atgtgtcgtc aacggaaatc
     4921 cgccgcaacc ttgccagcca aggcgtttca gacggcatcc cgcctgccgc cgcacgctac
     4981 atccgcgaac acggtttgta tgaaaaataa agtcaaatca gtaagaaacg gctataatgc
     5041 cgtctgaaaa catcccgtta ggaaaataat gaacgaacaa gaactgcaag acctgcaaaa
     5101 aatggtcggg gtcgccgtca acgccctcga agacatcaaa gccaaagaca tttccgttct
     5161 cgaaacgcaa gacaaaactt cgctgtttgc cagaatgatt atcgccagcg gcgacagtac
     5221 gcgccaagtc aaagcactgg ccaacaacgt tgccgtcgat ttgaaagaag ccggttttga
     5281 aatcctcagc accgaaggcg acagcggcga atggacgttg gttgatgcag gagacctcgt
     5341 cgtccacgtt atgctccccg ccgtgcgcga cttctatgat atcgacaccc tttggggcgg
     5401 cgagaaaccg agtttccacg ccggaatgca gaagccgtgg cacgcggcag actgattccc
     5461 gatgccgtct gaatgttcag acggcatttt cctgtaaggg agaaagcatt gaacatcacc
     5521 gttttggcag tcggcaccaa aatgccgcgc tgggttgatg aggccgtcgc cgaatacgcc
     5581 aaacgcttcg gacgcgacgt cgcctacgca ctcaaagaaa tcaaacccga aaaacgcggc
     5641 gcgggcgtga atgccgccca aggtatggcg gcggaagaaa aacgcatcct tgaagccgtt
     5701 ccgcaaggcg cgttccttgt cgttcttgac gaacgcggca aagcaccgac ctccgtcgag
     5761 ctggcggaac acctcaaaag ctggcagcaa aacggcgaac acgtctgctt cgtcatcggc
     5821 ggtgcggacg gcatgaccga ccgcctcaaa caacaagccc gcatgatgat gcgcctgtcc
     5881 agcctcaccc tgccgcacgg catggtgcgc gtccttctga ccgaacaact ctaccgcgcc
     5941 gcctccatcc tgcacaacca cccctaccat cgggaataag aaggcttttg tctgtacccc
     6001 taatcggtta aaatcacccc gttatttctg aacacacagc aaaggaatcc gctatggcac
     6061 gcatggtatt ctgcgttaag ctcaacaaag aagccgaagg catgaaattt ccgccgcttc
     6121 ccaacgaatt gggcaagcgc atttttgaaa acgtatcgca agaagcatgg atggcgtgga
     6181 cgcgccacca aacgatgctg attaacgaaa accgcttaag ccttgccgat ccgcgcgcgc
     6241 gcgaatatct ggcgcagcag atggagcagt atttcttcgg cgacggcgcg gatgccgttc
     6301 agggatatgt tccgcaataa cggttttccg ttttgaacac aggctgtccg aacctgcttc
     6361 agacggcctt taaaatacgc cggacaactt tatcttcacg caaccggaca aattttgaca
     6421 ttgggcaatg ttaaaatccc ccgttatttc caaccgcgct ttcaggagca gatgatatgc
     6481 aacacgacgt ttacgactac accgcgcata cggtttctaa aaacaccgtc ctgcagaaaa
     6541 cctaccgcct gctcggattt tcattcattc cggcagccgc aggcgcggca cttgccgcca
     6601 atgccggctt caatttttac gcagccttcg gttcgcgctg gatagggttt gccgtcgtgc
     6661 tggcgttttt ctacggcatg atccacttca tcgagaaaaa ccgttacagc aataccggcg
     6721 ttaccctgct gatgatattc acattcggta tgggcgtatt gatcggcccc gtgctgcaat
     6781 acgcactcca tattgccgac ggtacgaaaa tcgtcggcat tgccgccgcg atgaccgccg
     6841 ccgtcttttt aacgatgtcc gcattggcac gccgaacccg gctcgatatg aacgcgctcg
     6901 gacgcttcct gaccgtaggt gcggtcattc tgatggtcgc cgtggttgcc aatctgtttt
     6961 tgggtattcc cgcacttgcc ttgaccattt ccgccggttt tgtcttgttc agttccttaa
     7021 tgattatgtg gcaggtacgc accgtcatcg acggcggcga agacagccac atcagcgcgg
     7081 cactgacact gtttatctcg ctttacaaca tcttcagcag cctgctcaac atcctgttgt
     7141 ctttaaacgg cgaggattga tgtcggcaaa acgccgtccg actatgccgt ctgaaaatgc
     7201 ttcagacggc attttacttt gggcatacaa tacggatgca cacgcaccaa cacacagccg
     7261 actatgaagc cgggaggaat caaatgttac cgaatacacc gcgccgcgcc gtttatgccg
     7321 gcagtttcga tccgcccaca ttggggcatc tgtggatgat acggcaggcg caatctatgt
     7381 ttgacgaact catcgtcgcc atcggcatta accccgacaa acgcagcacc tataccgtcg
     7441 ctgaaaggca ggatatgttg tgcgatatta ctaaaatgtt tcccaacgtc agaaccgatg
     7501 tatttgaaaa ccgatttctg gtgcattacg cccgtgaggt agatgcagga ttcatcgtgc
     7561 gcggcatccg ttctgcttcg gattacgaat acgaacgttc catgcgccat atcaacagcg
     7621 acctcgcccc cgaaatatcc accgtattcc tcatgccgcc gcgcgaaatc gccgaagtgt
     7681 cgtccactat ggtcaaagga ctggtcgggc cggaaggctg gatggaaacg atccaccgct
     7741 acgtgccgca agctgtgtac gaaaaaatcc ttgccgaaca tcaacacgaa aattgaaccc
     7801 ttctattttt gcaaggcata tatggatatg ttggaaattt tgttccgcca tcaagacttc
     7861 gtcgccatca acaaaccggg cggcatatcc gtccaccaag acagcggcga gaccggactg
     7921 gcccgaacac tcgccataca gttgggcgta gagcgtgtgt ggctgctgca ccgattggac
     7981 aaacagacca gcggcatttt actgtttgcc ctcaacaaag aaagcgcgtc cgcccttagc
     8041 ggacagtttg ccggcaaaag catcaaaaaa acctatttgg cactatccga ccgcaaaccg
     8101 tccaaaaagc agggttggat taaaggcgga atggaaaaat ccagacgcgg aatgtggaag
     8161 ttgacgcgca atacagaaaa tatcgccgtt acccgattcc acagcatcag tatcgccgaa
     8221 aaactgcggc tgttcatcct ggaaccgcat acgggcaaaa cgcaccaatt gagagtggcg
     8281 atgaaaagtt tgggcagtcc gattctgggc gacagcttat acggcggaac agaatccgaa
     8341 accatgtttc tgtatgcatg gaaaatacaa tttgactacc aaaaccgaca aatcgaaatt
     8401 gttgcaccct taaaaaacga atggcagact gaaaatatcc atcgggcact ggaagaattc
     8461 tgtatggaaa ataaaattga ctgatataaa ttaaatttat aaacaaatag ataaatattt
     8521 ttaaaaaaat ttcttcag
//
LOCUS       DAWGBY010000082         8162 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.082, whole genome shotgun sequence.
ACCESSION   DAWGBY010000082 DAWGBY010000000
VERSION     DAWGBY010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8162
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.082"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            27..1142
                     /gene="asd"
                     /locus_tag="WHG62_001508"
     CDS             27..1142
                     /gene="asd"
                     /locus_tag="WHG62_001508"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ1725598.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIETILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            complement(1371..1901)
                     /locus_tag="WHG62_001509"
     CDS             complement(1371..1901)
                     /locus_tag="WHG62_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ1725599.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLRTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVSEHGDVPRDWAQKQADTWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(1912..2256)
                     /locus_tag="WHG62_001510"
     CDS             complement(1912..2256)
                     /locus_tag="WHG62_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725600.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKVNPIWALVWLLICMPCLLIASKCLGWKGWRRVVNIFACLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            complement(2243..3022)
                     /gene="xth"
                     /locus_tag="WHG62_001511"
     CDS             complement(2243..3022)
                     /gene="xth"
                     /locus_tag="WHG62_001511"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ1725601.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            complement(3105..4526)
                     /locus_tag="WHG62_001512"
     CDS             complement(3105..4526)
                     /locus_tag="WHG62_001512"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ1725602.1"
                     /translation="MTTIYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAAFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            complement(5214..6263)
                     /locus_tag="WHG62_001513"
     CDS             complement(5214..6263)
                     /locus_tag="WHG62_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ1725603.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSRLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDACMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            complement(6346..7500)
                     /gene="obgE"
                     /locus_tag="WHG62_001514"
     CDS             complement(6346..7500)
                     /gene="obgE"
                     /locus_tag="WHG62_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ1725604.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRCEKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDEAVDPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQERTVTFLEAIGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            complement(7793..8162)
                     /locus_tag="WHG62_001515"
                     /pseudo
     CDS             complement(7793..8162)
                     /locus_tag="WHG62_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         1910 a         2074 c         2011 g         2167 t
ORIGIN      
        1 acgatttttc ctcaaggagc aacacaatga aagtaggttt cgtcggctgg cgcggtatgg
       61 tcggttcggt tttgatgcag cgtatgaaag aagaaaacga cttcgcccac attcctgaag
      121 cgtttttctt taccacttcc aacgtcggcg gcgcagcccc tgatttcggt caggcggcta
      181 aaacattatt agatgccaac aatgttgccg aactcgccaa aatggacatc atcgttacct
      241 gccaaggcgg cgattacacc aaatccgtct tccaagccct gcgcgacagc ggctggaacg
      301 gttactggat tgacgcggca tcctcgctgc gtatgaaaga cgacgcgatt atcgtcctcg
      361 accctgtcaa ccgcaacgtc atcgacaacg gtttgaaaaa cggcgtgaaa aactacatcg
      421 gcggcaactg caccgtctcc ctgatgctga tggctttggg cggcctgttc caaaacgatt
      481 tggtcgaatg ggcaaccagc atgacctacc aagccgcttc cggcgcaggt gcgaaaaaca
      541 tgcgcgaact catcagcggt atgggcgcgg ttcacgccca agtggcggac gaacttgccg
      601 atcctgccgg ctcgattctc gacatcgacc gcaaagtatc cgatttcctg cgcagcgaag
      661 actatccgaa agccaacttc ggcgtaccgc tcgccggcag cctgattccg tggattgacg
      721 tggatttggg caacggccag tccaaagaag aatggaaagg cggcgtggaa accaacaaaa
      781 tcctcggccg cagcgacaat ccaaccgtga ttgacggcct gtgcgtccgc gtcggcgcga
      841 tgcgctgcca cagccaagcc atcactctga agttgaaaaa agacctgcct gtttccgaaa
      901 tcgaaacgat tttggcaggc gcgaatgact gggtgaaagt catccccaat gaaaaagaag
      961 ccagcatcca cgagctgact cctgccaaag ttaccggcac gctgtccgtc cctgtcggac
     1021 gcatccgcaa actgggcatg ggcggcgaat acatcagcgc gttcaccgtc ggcgaccagc
     1081 tcttgtgggg cgcggccgag ccgctgcgcc gcgtattgcg tatcgtgttg ggcagcctgt
     1141 aagccctgtt tgaatggaaa tgccgtctga agcctgtttc agacggcatt ttccttgcaa
     1201 ccctgccgga taacgccctg ccggcactgc cgacgtaaaa aataaaggat tccatttccg
     1261 gcggtatgcg gcagcccgac tttatccgaa cctgatgcgc ctgcacgtca atgaaaacag
     1321 cccgatatgc ggacttcctg ctacagccga aattccgata aggcaagcgt tcacgccagc
     1381 aacatttcct gcatcagctt cataccccac tgccagccgc cgagcatacc gttcaaactg
     1441 cccgaatgcg gggaaaccaa caggcgcgcg ttccacgtat ccgcctgttt ttgcgcccaa
     1501 tctcgcggca catccccgtg ttcggacacc accaatgcgg cacggcaggg acagcggacg
     1561 cgttggaaag tgtgttccgc atcgtcggga aaaatatcgg gacgctgcgg tacaaggatg
     1621 atgttggcaa ttttcttccg tgtcaggatg tctgcctgat acagccacgc caaaaatgcg
     1681 gccgcgcccg caccgtgtgc gacaacggcg acgtatttgc cacgtatgcg ttcaaatgcc
     1741 gtccgaagcc ctgcctgcca ttcccctatg ctttgaccgg ccgacgcttc ggacatctgc
     1801 acgacgggat aactgatcgc ccaacggtct atccacatct gatcctctcc ggcatcgcgt
     1861 atcagccaaa gcgtcaaatc ttcgagttca aaaccctgca taccgccccg cctatttcag
     1921 caggtcccgg agggtaaagg cgatgagcag cgaagcgggt acgctcaata tggcgcagac
     1981 ggtcaggcag gcaaaaatat tcaccacccg ccgccagcct ttccaaccca aacatttgga
     2041 cgcaatcagc aggcagggca tgcagatcag cagccacacc aacgcccata tcgggtttac
     2101 cttggtcggc gcaagccagc cttgcatccg cgacaacata aatatcgccc acaccaatat
     2161 gggcaggata aacgcagcga caacccatgc tgcgcctatt cctgtttttc cgtccacatt
     2221 ccaatcatat ttacccaaaa ctttattcgg cagcatagtc atactccatg accagcggcg
     2281 catggtcgga aaatttttca tctttataaa cgtgtgcgga cacggctttg gcggcaagtt
     2341 cgggcgtaac catctgataa tcgatgcgcc acccgacatc tttcgcatac gcctgcccgc
     2401 ggttgctcca ccacgtgtag cccggcacat cgggataaag cgtgcgccac atatccgtcc
     2461 aaccgagctt gtggataacc ttgcctatcc actcgcgttc ttccggtagg aagcccgaat
     2521 ttttctgatt gcctttccag tttttcaggt cgatgttttg gtgggcgatg ttccagtcgc
     2581 cgcaaacgac aatgtcgcgt ccttcgtttt tcatcgcttc gagcataggg taaaacgcat
     2641 caaggaaacg gtatttcacc tgctgccgtt cttccgcact gctgccgctg ggcaaataaa
     2701 gcgaaataac gctcaacctg ccgaaatcgc aacgcacaaa ccgcccttcc ctgtcgaatt
     2761 cttcaatgcc cataccgatt tgcacattgt cgggtttgcg tttgctgtac accgccacgc
     2821 cgctgtaacc gcgcttctcg gcgcaatgcc aatggccgtg catcccgtgc ggatttttca
     2881 tatcggcaga caaatcagcc tcctgcgctt tgagttcctg cacgcagaca atgtccgcgc
     2941 ccgatgcggc gatgtattcg taaaaacctt ttttgtaggc ggagcggatg ccgttgacgt
     3001 tggcggaaat gattttaagc ataataaaaa taagttctca caataaaaat gccgtctgaa
     3061 caaaaaaggg caaaatgcgg cacatttacc cttttcgatg gattttaacc gcgccgccaa
     3121 gtcgtgccgc cggcgttgtc ttccaaaatg attttgtgtt cgttcagaag gtcgcggatg
     3181 cggtcggatt ccgcccagtt tttatcggcg cgcgcctgtt tgcggcgggc gatcaagtct
     3241 tcgatttctt cgttggagag gccgtctgaa gccgcgctgc cttgcaggaa ctcggtcggg
     3301 tcgcgttgca gcaggccgat gatgccgccc aaggctttca ggcagccggc gagctgtgcg
     3361 tcattggttt tgttcacttc tcctgccagt tcgaacagca cggcaaccgc ttcgaccgta
     3421 ccgaaatcgt cgttcatggc ggcgtagaag cggcgggtgt agccgttggc gttttcagac
     3481 aaatcaaacg cggcggcagg cgtatttttc aaggtggtgt atagacgggt caacgcgcct
     3541 ttcgcgtcgt ccaaatgcgc gtcggaatag ttcaacgggc tgcggtagtg ggcgcgcagg
     3601 atgaagaaac gcacaacttc agggtcgtat tgtttcaata cttcgcggat ggtgaagaag
     3661 ttgcccagcg atttcgacat tttttcgccg tctacgcgga taaagccgtt gtgcagccaa
     3721 tatttgacgt ggctggcgat gctttgcccg tggtgggttt gcgcgtgatg atggccgcag
     3781 gtatgccccg tcgcgccgac gctttgggca atttcgtttt cgtggtgcgg aaactgcaaa
     3841 tccgcgccgc cgccgtgaat gtcgaacgta tcgccgaaca ggttttcact catcgcagaa
     3901 cattcgatgt gccagcccgg ccgtcccctg ccccacgggc tttcccatgc cggctcgcct
     3961 gctttcgccg ctttccacaa cacaaaatca agcggatcgc gtttgaaacc gtccacttcc
     4021 acacgttcgc ccgcgcgcag gtcgtccaac gatttgcccg acaattggcc gtaagcggca
     4081 aactcgcgca cggcgtagta aacgtcgcca tttgcggcag gatatgcctt gccgttttga
     4141 atcagggttt caatcatggc aatcatttgt gggatgtttt ccgtcgcctt cggctcgata
     4201 tcgggacgca acacacccaa agcatcggca tcttcgtgca tagcctgaat gaaacgcgcg
     4261 gtcagttcgc cgatggtctc gccgttttca gccgcgcggg caatgatttt gtcgtcgatg
     4321 tcggtgatgt tgcgcacata agtgagcgga taaccgcact cgcgcagcca gcgggcaatc
     4381 atgtcgaaca caaccatcac acgggcatgg cctaagtggc aatagtcgta aacagtcatg
     4441 ccgcaaacgt acatacgcac gttttcaggg tcgatggggg taaagggttc tttttggcgg
     4501 gtaagggtgt tgtagatggt ggtcatggga ttatggatta atctttgttg ctcggatgat
     4561 aatttctgtt ctgttcctgt agatacggac caaggaacat tacgtagttg cggattatta
     4621 atatggctga tatttgtgaa aattggttct gcataacagt ttgcaaaatt ttttgtaaat
     4681 tctgataatt taaacttatc ttttaataag tttgctaaat ctgatgacga gggataaagt
     4741 ttacttctta tactaggcat ttcaatatga aggactattt ttatttcgtt acaatctaaa
     4801 gccaagcgag aaaaatcttt ttcttcctgt ttttctgctt taaatttagc agaaaccaat
     4861 cctgccaatg aatctcgaat ttttcttgcg attaaatatg gtaggtcaga aagtttttca
     4921 tctattgatt gggcatttgg ctcaagccca agtcggtaat aatctttaat ttcgattagc
     4981 caaagtgtcg attcatgaag ggctattata tctacacctg agctgccatt atcgtcatct
     5041 acactttgat ttatctcgtt ctttcccttt tcatttgtat caattttatt acgtaaatta
     5101 caactgttct gaaaaatttt ataatgttcc cattcgtcat acttggtaac gtaataatct
     5161 tcaggaaaag caaaggttaa tctcttttct gtgattgtag tcatagctta acctcaaata
     5221 ttcagatacc tgtctgcctg cataatgttt tcatctaaca atatcaatgt gttcaaatca
     5281 ttaatactgt tcccttgctc cacttttgtt ccatcatcgg aagcaatcaa cgagaaaaaa
     5341 cgtacaggta aatccgtgtt attttcaagc ttcaaaagtt ccaattctct caataagaat
     5401 aaagagtgtg ttgcaataaa aacctgaata ccctgttgag ataaagacca aataatacgg
     5461 gcagccactt tgatcaattt aggattcaga ttagcttccg gttcatccca aaatagatag
     5521 cctttatcca gcaatgcccc tgttgcgatt aaccgggcaa tcatgacaaa tttccgcaaa
     5581 ccctctgcta ccaaaggtgc ttcaatctta ccgcccgtat ttgtcagcga tagataaaac
     5641 cttccttgtt cttcagatac ttttccgccc atcgcgttct caataggttc gagcaattct
     5701 cgaatttttg tttctctggg gcctttggca agcgggtgat ttaattgcat acaggcatca
     5761 aaccaagttt cttcgaaagg gatgctttgg ttttgataca aagaagtgaa ccaagggcaa
     5821 agtgtaatta attcgcggct gggtaagaag ataggtgtcg gagtatattc attttctttc
     5881 aatccgatgc tttgaacatt gacttgcgat gatgagttac tggaaaaatt cagcctacta
     5941 tgcgtagtgc cgttttgcag ttttaaaacg atttccgtac gcccgcgccc ctgcaaacgt
     6001 ttgctcaacc tgcccaagga atcgggacgg aaaacattca gtaatttatc ggcaaaactt
     6061 ttttgcaatt ctgttttcag taatctgttt ttggtgttag atgttacttc tagcaggctg
     6121 tataaaattt ttaacaaatg tgttttgcca caaccgtttt cggcaacaat aacattgaga
     6181 ttttcagaaa attcaaaagt atcgtttgga agaacggtaa agtttgtcaa ctcaagcgac
     6241 tggatatatt ggttagatga catttttaat ccatttcaat cttgctttaa aattgtttca
     6301 aacaaccttt tgtagaacaa atatcgtctg aaaccctttc ttttttcact ccggcttaaa
     6361 cacgcccgta tccgttttag gctgctgttc gataatttca acatttgccg ccgctttctc
     6421 cgcttctgct ttttcagctt cgatacgttt tttctcggtc aggtattggt tgatttggtg
     6481 taccaattcc tgcgtgcctt ggtgggttag cgcgctgatt tggaagaggc gcggggtttc
     6541 catatcgaat tggaagcggt cgtccggttt cgggtaatcc cagccgatgg cttcaaggaa
     6601 ggtgacggtg cgttcttggg cttcttcttc atcgagcatg tcgagtttgt tcagcaccag
     6661 ccagcgcggt ttgccataga gttcttcatc gtatttgcgt aattcgttga tgatggcaag
     6721 ggcttcttcg gcgggatcga cggcttcgtc gaagggcgcc aaatcgacga cgtgcagcaa
     6781 taatccggtg cgcgataagt gtttgaggaa acgatgcccc aaacccgcgc cttctgccgc
     6841 gccttcaatc aggccgggga tgtcggccat cacgaagctg tggttttcgt cgatgcgtac
     6901 cacgcccaag ttcggatgca gggtggtgaa ggggtagttg gcgattttgg ggcgtgcggc
     6961 ggatacggcg gtaatcaggg tggatttgcc ggcgttgggc atgcctaata agccgacatc
     7021 ggcgaggact ttgagttcga gttgcaggga gcgggtttcg ccttcttcgc cgggcgtgga
     7081 ttgttttggg gcgcggttga cggaggattt gaagtggatg ttgcccaagc cgcctttgcc
     7141 gcctttggct aggcagacgc gctgtccgtg gtaagtgagg tcggcaacga tttcgtcggt
     7201 gtcgaggtcg cggataaggg tgccgacggg cattttgagg acgatgtcgt ccgcacctgc
     7261 gccgtaacgg tcggaaccgt ggcctttttc gccgtttttg gcttggtagc gtttaacgaa
     7321 gcggtattcg acgagggtgt tggtgttttc gtcggcttcc gcccagacgc taccgccttt
     7381 gccgccgtcg ccgccgtccg ggccgccgcg cggtacgaat ttttcgcagc ggaaactggt
     7441 tgcgccatta ccgcctttgc ctgcggcgac ttcgattttt gcttcgtcga tgaatttcat
     7501 tcaatgctct tgtttgttgg tttcaaatgg ggggttcaga cggattaccg tgtgttttga
     7561 tgccgtccga acagaatttc ggacgctatt ataagggata agcggtattt caacacgccg
     7621 tacccaaact atttgttccg cccatcttaa tgaattttta agcaaatctt cagcctgcaa
     7681 acaaaattat gtccaacttc tttggtacaa tcgcgccttt ttgacattcc gacccgacgg
     7741 aatgtccgtt caaaccgtta catataataa gttttggggc tgtcctagat aactaggata
     7801 aactcggttt tactaattgt tttaaaatgg aacaagaact tttatctcac tgttgttaaa
     7861 acgccattcg cactccttta aatacagctc aaaatgcgct ttgggaatgc cgttaaactt
     7921 gcgtaaatga cgttttgcct ggttccaaaa gttctcaatt ccattaatat ggttttgtcg
     7981 ttcagcaaaa tgtgtgctgt gattgatacg aaaacgaagt ttcagcgaag ctaaaatggc
     8041 taaattcgcg cacatctaat acatcatagc tacgataaca atccgtataa acaatgctgt
     8101 caggtttcac ttgttcacgg ataataggaa ataaagtagc ggtttgaatt cggtactgta
     8161 ac
//
LOCUS       DAWGBY010000083         8148 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.083, whole genome shotgun sequence.
ACCESSION   DAWGBY010000083 DAWGBY010000000
VERSION     DAWGBY010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8148
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.083"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(265..1650)
                     /gene="pntB"
                     /locus_tag="WHG62_001516"
     CDS             complement(265..1650)
                     /gene="pntB"
                     /locus_tag="WHG62_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ1725605.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGVAGMAVA
                     LFVTVFSENTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIESGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALGVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGSDSG
                     TSSSGSQEIGEYREVKAADVAEMLKGANSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1730..2113)
                     /locus_tag="WHG62_001517"
     CDS             complement(1730..2113)
                     /locus_tag="WHG62_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ1725606.1"
                     /translation="MTFAYWCILIAYLLPLFCAAYAKKAGGFRFKDNHNPRDFLAHTQ
                     GAAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFVCTVGLFVAAA"
     gene            complement(2117..3658)
                     /locus_tag="WHG62_001518"
     CDS             complement(2117..3658)
                     /locus_tag="WHG62_001518"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ1725607.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPSPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTDNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTHDGEITFPPPPIQVSAQPQQTPSEKAASAA
                     KPEPKPVSLWKKLAPAVIATVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIASINIFGGFAVTRRMLN
                     MFKKG"
     gene            3948..4781
                     /gene="serB"
                     /locus_tag="WHG62_001519"
     CDS             3948..4781
                     /gene="serB"
                     /locus_tag="WHG62_001519"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ1725608.1"
                     /translation="MPQALVLQFPSAEALPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SEADAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPSAEFLLDECKRHNVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANILEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGVGVAYRAKPKAQAAADACINFGGLERVRGLF
                     G"
     gene            4845..6068
                     /locus_tag="WHG62_001520"
     CDS             4845..6068
                     /locus_tag="WHG62_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ1725609.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGADGVY
                     TSFREGVAQASGMRRVAVLTLCGAVAGSGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGKRLGLDEGEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAAAAALLTSVIATAVARIGLGDLQQYHPANLAV
                     NTSLLWFSAVIGPILGATAVYFRRSAEKFPFLKRDNPRIIPLAIALFALIGAIAVWFP
                     EILGNGKAGNQLTFGGLTDWQHSLELTAVKWLVVLMALAAGAYGGLITPSMMLGSTIA
                     FAAAAAWNSVFPEMSSESAAVVGAAVFLGVSLKMPLTAIAFILELTYAPVALLMPLCA
                     GMAGAVCVAKKMGFK"
     gene            6232..7812
                     /gene="purH"
                     /locus_tag="WHG62_001521"
     CDS             6232..7812
                     /gene="purH"
                     /locus_tag="WHG62_001521"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ1725610.1"
                     /translation="MPSIKRALISLSDKTGAVEFARTLHKLGVEILSTGGTAKLLAGA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDEVLSGQPQIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIHPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDICR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANFDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGIRHFRH"
BASE COUNT         1814 a         2228 c         2298 g         1808 t
ORIGIN      
        1 caagtggaaa aatacttggc agattatcag gcacacttgg aaaaagtgtt cggctaatta
       61 aaaatccatc ttcaacacgg agatggattt tgtttgtttc gttgattttg tgtcagtttc
      121 agatgtaggt gcttattcgg acgggccgtc tgaaaatgtt tgccccaatg caaaaaaatc
      181 actgcaaacc ttcataaacg aggtttgcag tgattttttc aaatcaaaca gattgaaaac
      241 ctgcgccgaa ttattcagac ggcattattt tttcagttcg gacagaatgt catctacggt
      301 tttcttcgca tctccgaaac acattacgct gttttcgttg aagaacagcg ggttttgtac
      361 acctgcgtag ccggtattca tcgagcgttt gaagacgacg acttcttttg ccttccatac
      421 ttccaacacg ggcatacccg caatcgggct gttcgggtcg gtttgggcgg caggattgac
      481 ggtatcgttc gcaccaatca ccaaaaccac atcggtttcg gggaagtcgt cgttgatttc
      541 gtccatttcc aaaacgatgt cgtaggggac tttggcttcg gcaagcaaaa cgttcatatg
      601 accgggcaga cggccggcga cggggtggat gccgaagcgc acttctgtgc cgtttttacg
      661 taaaagctcg gtgatttcgg caacggggta ttgcgcttgt gcgactgcca taccgtagcc
      721 cggggtgata atgacactgt ttgcgccttt cagcatttcg gcaacgtcgg cagctttgac
      781 ttctcggtat tcacctatct cttggctgcc ggaagatgat gtgccgctgt cgctgccgaa
      841 accaccggca atcacggaaa taaacgaccg attcatggct ttgcacataa tgtaggacag
      901 aattgcgccg cttgatccga ccaacgcgcc ggtaacgatg agcaggtcgt tggagagcat
      961 aaagcctgcc gctgcggccg cccagccgga gtaggagttg agcatggata cgaccacggg
     1021 catatctgcg ccgccgatgg aggcgaccaa gtgccagccg aatgcaaggg caatcagggt
     1081 cattatcagt aggatgaagc cgctgccgtc aatgccgaca aatacgagca gcaacacaaa
     1141 cgatacgcca agtgccagtg cgttgagctt gtgtttggcg ggcagttgca gcgggctgct
     1201 gctgattttg ccgttgagct tgccgaatgc gaccagtgag ccggtaaagg ttactgcgcc
     1261 gatgaaaatg cccaaataga cttcgaccag atggatggtg tgcatatcgt gcgaaacgtt
     1321 gcccgactcg atgtagctgt tgaagccgac caaaacggct gccaagccga cgaagctgtg
     1381 cagcagggca atcagttcgg gcatttcggt catttctact ttttttgctt tgtagatgcc
     1441 gattgccgcg ccgatgagca tggcgatgat gatccagccc agtccgtggg tgttttcgga
     1501 aaacacggta acgaacaagg caaccgccat cccggcgacg ccggaatagc agccctgttt
     1561 ggcggtttcc tgtttggaca gccccgccag tgagaagatg aataaaattg cggcaacgat
     1621 atacgccgct gttacgagtc ctgaagacat ggaaattctc cgattttcga tgatttgttt
     1681 tcaatgccgt ctgaaaaatt gacgttcgtg ttttcagacg gcatctgttt caagcagccg
     1741 cgacaaacag cccgacggtg cagacaaatc cgcccgccca catcagcgag cgcaatgctg
     1801 ctttgtcggc gatgtagcac cagataaagg cgaggcggaa caggatgaac aggccggcaa
     1861 gcgtgttgac ggttgcttgt ccggcattgc cggttgcatg cgccgtcaaa acggcggcag
     1921 caaacggtgc aaaggcttca aaaccgtttt gctgcgcggc gtgggcacgg gcggctgcgc
     1981 cttgcgtgtg cgccagaaaa tcgcgcggat tgtggttgtc tttaaaccgg aatccgcccg
     2041 cttttttggc atacgccgca caaaaaagcg gcaataggta ggcaatcaga atgcaccaat
     2101 aggcgaaagt catggcttac cctttcttaa acatattcag catacgccgt gttaccgcaa
     2161 agccgccgaa gatgttgatg ctggcaatca ggatggcaac aaacgacagc agcgaaacaa
     2221 agccgttgcc ctgaccgatt tgcagcagcg cgccgacgac gatgatgccg gagatggcat
     2281 tggttaccga catcagcggt gtgtgcagcg agtggctgac gttccaaacg acatagtagc
     2341 cgatgacgca ggcgaggacg aacacgataa agtggttcag gaatgctgcg ggtgcgaccg
     2401 cgccgaccca cagcaccaat acggtggcga tgacggcggg cgcgagtttt ttccacaggg
     2461 aaacaggttt cggctcgggc ttggcggcag acgcggcttt ttcagacggc gtttgctgcg
     2521 gctgggcgga aacttgaatc ggcggaggcg ggaaggtgat ttcgccgtcg tgggtaacgg
     2581 tcatgttgcg gataatcacg tcttcgaagt ccagcgtgat ttcgccgtct ttgttcgggc
     2641 ttaacagctt ggtcaggtta accaagttgg tggcgtaaag ttgggaagac tgtccggcaa
     2701 ggcggtttgc catgtcggtg taaccgatga ttttcacgcc gttgtcggtt acggacaatt
     2761 cgcccgggcg ggtgagttcg cagttgccgc ccgtcgccgc cgccaaatcg acgatgacgg
     2821 agccggattt catgctttcg accatttctt tggtaatcag cttgggcgag ggtttgcccg
     2881 gaatggcggc ggtggtgatg atgatgtcca cttctttcgc ctgttcggca aatagcttca
     2941 tctcggcggc gataaattcg tcgctcatca ctttggcgta gccgtcgccg ctgccgcccg
     3001 attcttgcgg gaagtcgagt ttcaggaact tgccgcccat cgattcgatt tgttccgcca
     3061 cttccaagcg ggtatcgaat gcgcgcacca ctgcgccgag cgagtttgcc gtaccgattg
     3121 ccgccagacc cgccacacct gcgccaatca ccaaaacctg cgcgggcggc actttgccgg
     3181 cggcggtgat ttgaccggtg aagaaacggc cgaaggcgtt ggcggcttca atcacggcgc
     3241 ggtagccgct gatgtttgcc atcgaagaca aagcgtccaa agcctgcgcg cgggaaatac
     3301 ggggcaccat gtccatcgcc agcgcattga ctttcttggc gcgcaaggct tcgaccaaag
     3361 cctcgttttg gcgcggccac aggaagctga cgatggtttg accttcgttc aaaagcggca
     3421 gctcgccttc ggacggcgcg ttaaccttat aaatcaaagg gcaggcccaa accgccgctt
     3481 tgtcggcaac ggttgcgcct gctgtttggt aagcggcatc gtccaaactt gccgccaaac
     3541 ctgcaccgct ttcgacaacg gtttcaaagc ccagtttgcc cagcagggcg acggtggcgg
     3601 gcgtacaggc gacgcgggtt tcgccggata atgactcgcg tgggatgccg attttcatct
     3661 ctgaatcctt tttcgggttg tttatatgta tcgtgggtta aatttaaatc ggggcagggc
     3721 ggagcaacgc cgtaccggtt taaaaccgat tcacttcaaa tgttaatata ttttagataa
     3781 tccccttata acgaattttc atcaggctgg caatagttgc ggcattttcc cgtgttgtcc
     3841 gacacatact gccgtttgtt tttgaagccg ttttccgatt gcagtcccgc ccgccgtaac
     3901 attctttgcc gtttcactat ataatccgca ttttttgagc caccgccatg ccgcaagccc
     3961 tcgtcctcca atttccctcc gccgaagccc tgccttccga cttcccctcc cgcctgcccg
     4021 aacctgattg cgccgatgaa aagcgtatgc gttttattgt tgaagaaggg ttttctttaa
     4081 gcgaggcgga cgcggcgttg cttggcagcc gtcaaatcga ccacgccgtg ttgccggata
     4141 tggatttcgg cgaactcggt ttaattgtca gcgatatgga ttcgacgctg attaccatcg
     4201 aatgcgtcga tgaaattgcg gcaggcgtgg gtttaaaaga caaagtagcg gaaattaccg
     4261 agcgttcgat gcgcggcgaa ctcgatttcg aacagtcttt acgcagccgc gtcgcgctgt
     4321 tggcgggatt ggacgaacag attttggcgg acgtttatga aaacgttttg aagctctcgc
     4381 ccagtgcgga atttttgttg gacgaatgca aaaggcacaa tgtgaaattc ctgctggtgt
     4441 ccggcgggtt cacgtttttt accgaacgtc tgcaacaacg cctcggcttc gaataccaac
     4501 acgccaatat tttggaaatt gaaaacggca ggctgaccgg acgtttgaaa ggcagaatta
     4561 tcgacgcgca ggcaaaggcg gatttattgc gcgaataccg cagccgcctc ggattgcagc
     4621 cgcatcaggt gttggcgatg ggcgacggtg cgaacgatat tccgatgctc aaagaagcgg
     4681 gcgtgggcgt ggcttaccgt gccaaaccga aagcgcaggc agccgccgat gcctgtatca
     4741 acttcggcgg tttggagcgt gtacgcggcc tgttcggata ggcggatagg aaacggatgc
     4801 cgtctgaaag gttttcagac ggcatttgaa cggcaggaac gacagtggga cgcagaaaac
     4861 tttggtttgc cctggcagca gcgggcgtta tcggcggttt ggtcggcatt gtgctgacgg
     4921 aactgatgca cttcatacag catacggcat acggttatgg cgcggacggc gtgtacactt
     4981 cgttccgcga aggcgtggca caggcttccg gtatgcggcg cgttgccgtg ctgacgctgt
     5041 gcggcgcggt cgcaggcagc ggctggtggt tgctgaaacg tttcggcaag ccgcaaatcg
     5101 aaatcaaagc cgccttgaaa cagccgttgc aggggctgcc gtttctgacg acggttttcc
     5161 atgttctgct gcaaatcata acggtcggac tcggttcgcc gctcggacgc gaagtcgccc
     5221 cgcgcgaaat gaccgccgcg tttgcttttg ccggcggcaa acgcttgggt ttggatgaag
     5281 gcgaaatgcg gctactgatt gcttgcgctt cgggtgcggg tttggcggcc gtgtataacg
     5341 tgccgctcgc ctcgacgctg tttatcctcg aagcgatgtt gggcgtgtgg acgcagcagg
     5401 ccgccgctgc cgcgttgctg acttcggtca ttgccaccgc cgtcgcgcgc atcggcttag
     5461 gcgacctgca gcaatatcat cccgccaacc ttgccgtaaa cacttcatta ctttggtttt
     5521 ccgccgtcat cggcccgata ctgggcgcaa cggcggtata tttccggcgc agtgccgaaa
     5581 agttcccctt cctcaagcgc gacaatccga gaattattcc tttggcgatt gctttgtttg
     5641 cactcatcgg cgcgattgcc gtttggtttc ccgaaatttt gggcaacggc aaagcaggca
     5701 accaactgac ctttggcgga ttgaccgact ggcagcacag ccttgagctg accgccgtca
     5761 aatggctggt cgtcttgatg gcgctggcgg caggcgcata cggcggcctg attaccccgt
     5821 ccatgatgct cggcagcacc atcgcctttg ccgcagccgc cgcgtggaac agcgttttcc
     5881 ccgaaatgtc gtcagaaagc gcggctgttg tcggcgccgc cgttttcctc ggcgtttccc
     5941 tcaaaatgcc actgacggcc atagccttta ttttggagct tacctacgcc cccgttgcct
     6001 tgcttatgcc cttatgcgca ggtatggcag gcgcagtatg tgtggcaaag aaaatgggat
     6061 tcaaataggc aaaattaaaa tgccgtctga aaccggtttt cagacggcat ttctttgtaa
     6121 attgtcaaca atatctgcaa aaacctactg ccggaaagtg gaaaatagcg gataataccg
     6181 ccccgacaac attaccgttt cccatcccaa cgtcagaaaa aggaaatccc tatgccttcc
     6241 atcaaacgcg ccctgatcag cctgtccgac aagacaggcg cggtcgaatt tgcccgaacc
     6301 ctgcacaagc tcggtgtcga aatcctatcc accggcggca cggcgaagct gcttgccggt
     6361 gcgggcgttc ccgtgattga agtcgccgac tacaccggtt tccccgaaat gctcgacggc
     6421 cgcgtgaaaa cgctgcatcc gaaaatccac ggcggcatcc tcggtcgtcg cgatttgggc
     6481 gaacacgtcg ccaagatgga agaacacggc atcggcaata tcgaccttgt gtgcgtcaac
     6541 ctttatccct tcgccgccac catcgccaaa ccaaactgca cactggaaga cgcgattgaa
     6601 aacatcgaca tcggcggccc gaccatggtg cgttctgccg caaaaaactg gaaacacgtc
     6661 gccatcgtta ccgacaccgc cgacttcccc gccatcgccg ccgaactcga agccaacaac
     6721 ggcgcgttga gcgacaaaac ccgcttcaac ctgtcgcgca aagcgttcag ccacaccgcc
     6781 caatacgacg gcatgatttc caactacctg acctcgcttt cagacgaggt cttgagcggc
     6841 cagccccaaa tcggcgaatt tccaagccgg ttcaaccaaa gctggattaa agtacaagac
     6901 atgcgctacg gcgaaaatcc gcaccagcgc gccgcgttct accgcgatat tcaccccgcc
     6961 gccggcagcc tcgccgccta caaacagctg caaggcaaag aattgtctta caacaacatc
     7021 gccgatgccg atgccgcatg ggaagccgtc aaatcctttg acgcgccagc ctgcgtgatc
     7081 gtcaaacacg ccaatccgtg cggcgtcgcc gttgcagccg atacattgac cgcctacaaa
     7141 ctcgcctacg tcaccgacac caccagcgcg ttcggcggca tcatcgcctt caaccgcgaa
     7201 gtggacggcg aaaccgtcaa acagattacc gacaaccagt ttatggaagt cttgatggcg
     7261 ccgaagttta ccgccgaagc cctcgaaatc gccgccgcca agaaaaacgt gcgcgtattg
     7321 gaagtgccgc ttgaggcagg cgcaaaccgc ttcgaactca aacgcgtcgg cggcggactg
     7381 ttggtacaaa cacccgacat ctgccgcatc agccgcgccg atttgaaagt cgtctccaaa
     7441 cgccaaccga ccgagcagga atggaacgat ttgctgttcg tctggaacgt cgcaaaatac
     7501 gtcaaatcca acgccatcgt gttcggcaaa ggcggacaaa cctacggcat cggtgcaggc
     7561 caaatgagcc gcgtggacag cacccgcatc gccgcccgca aagcgcagga cgccaatttc
     7621 gacctcaacg gcgcgtgtgc cgcctccgat gccttcttcc ccttccgcga cggcgtggat
     7681 gtgattgccg aacagggcat taaagccatc atccatccgg caggttcgat gcgcgatcaa
     7741 gaagtcttcg acgcggcaga cgaacacggc attgcgatgg tggtaaccgg catccgccac
     7801 ttccgccatt aaggcagatg aacaaggcaa tgccgtctga agggctttca gacggcattt
     7861 tgcgctattt tgtgaaggta gggatgacgg ttcgggtatt cctgacaggg tggattttca
     7921 aggtgttgta tagggtgtag gaggattcgt aaaaggtggg atgcagggtg tgcttcagcc
     7981 cgctgcatca aaaatttttg gagaaccggc gggagtcggc ggttttggtt tcggcgggga
     8041 cggtggaaat gggtaacatt gacggaatcg acggaagcgg tgggctgaag cccacccttg
     8101 tatattggaa tcactgtatc atagcaacaa accgcccggc cgccaccc
//
LOCUS       DAWGBY010000084         8141 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.084, whole genome shotgun sequence.
ACCESSION   DAWGBY010000084 DAWGBY010000000
VERSION     DAWGBY010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8141
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.084"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(297..2339)
                     /gene="recG"
                     /locus_tag="WHG62_001522"
     CDS             complement(297..2339)
                     /gene="recG"
                     /locus_tag="WHG62_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ1725611.1"
                     /translation="MMSPETRKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAIGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQVREIAPMLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(2425..2868)
                     /gene="secB"
                     /locus_tag="WHG62_001523"
     CDS             complement(2425..2868)
                     /gene="secB"
                     /locus_tag="WHG62_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ1725612.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDADLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(2889..3146)
                     /gene="grxC"
                     /locus_tag="WHG62_001524"
     CDS             complement(2889..3146)
                     /gene="grxC"
                     /locus_tag="WHG62_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ1725613.1"
                     /translation="MQTVTMYTGPFCPYCTMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            3360..4853
                     /gene="rng"
                     /locus_tag="WHG62_001525"
     CDS             3360..4853
                     /gene="rng"
                     /locus_tag="WHG62_001525"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ1725614.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(4888..6138)
                     /locus_tag="WHG62_001526"
     CDS             complement(4888..6138)
                     /locus_tag="WHG62_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ1725615.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRIFVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(6134..6309)
                     /locus_tag="WHG62_001527"
                     /pseudo
     CDS             complement(6134..6309)
                     /locus_tag="WHG62_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(6531..7844)
                     /locus_tag="WHG62_001528"
     CDS             complement(6531..7844)
                     /locus_tag="WHG62_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ1725616.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLDADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
BASE COUNT         1916 a         2393 c         2102 g         1730 t
ORIGIN      
        1 atttctagat tcccgcctgc gcgggaatga cggcggaggg cttgccgttt ttcctggtaa
       61 gtctctgcgg cttctcattg ccggtttccg cctacttggg aatgacgtga tttaaaatca
      121 tgaaaatgtg tcaaaaataa tatagtggat taacaaaaac cagtacggcg ttgcctcgcc
      181 ttgtcgtact atctgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca
      241 ctataaaaat cagatttccg ttacactttt ttccaatatt tcagacggca ttttgctcac
      301 acgcccaaat acccttccct gccggaaagc caccttgcca aatgcgcttc gacgatttcg
      361 gggttttgct caatcagcat cggggcgatt tcgcgcactt gttccaaaag gtgtaagtct
      421 tcttcaagct tggcgaagcg cagcataggc acgccgcttt ggcgcgcgcc gagaaattcg
      481 ccggggccgc ggatattgag gtcttggcgg gcgatttcaa agccgtcggt gtgttcgtaa
      541 atcactttca accgcgcttt ggcgagttcg cccaagggtt cggcaaacag gaggacgcac
      601 acgctttctg ccgcgccgcg cccgacccga ccgcgtaatt ggtgcagctg cgccaagccc
      661 atgcgctcgg cgtgttcgat gaccatcagg gcggcattgg gcacatctac gccgacttcg
      721 atgacggtgg tggcgaccaa gacgttcagc ccccccgaag aaaaccgcgc catcacttcg
      781 gccttttcgg cggccttcat gcgcccgtgt accagtccga tattgagttc gggcaatgcc
      841 gtctgaagcc gggcgagggt ttcggcggcg gtttgcagtt gcagggtttc gctttcttca
      901 atcaatgggc agacccaata cgcctgccgc ccttttcggc aagtgccgag gacgaagcct
      961 tcgacttcgg cacggcggac gttgttgacg aggcgcgttt taatcggtgt gcgcccgggc
     1021 ggcaattcgt cgatgacgga cacgtccaaa tcggcgaaaa aactcatcgc aagcgtgcgc
     1081 gggatgggcg tggcggacat catcagctga tggacttcgc gccctttgtt tttgagggcg
     1141 aggcgttggg caacgccgaa acggtgctgt tcgtccacaa tggtcaagcc caaattgtga
     1201 aacgccacgc cgtctgaaaa cagggcgtgc gtgccgacgg cgattttgac gctgccgtca
     1261 gccagtttgg ctttggcttc gtctttggct tttttacgca aactgccaaa aaggcggaca
     1321 acttcaatgc ccaaaggttc gagccattgt ttaaatttaa taaaatgctg ttcggcaagg
     1381 atttcagtgg gcgccattac agccacctgc gcaccggatt cgatagccgt caaagcagac
     1441 aaagcagcca caatggtttt gccgctgccg acatcgccct gcagcaggcg gtgcatcggg
     1501 taggtttgcg ccatatcgcg gcagatttcg gaaacaactt tttcttgcgc atcggtcagg
     1561 gcaaacggca gggcttggcg cagggcttgg gtcaatgtgc cgtcgccgcc caatgccgcc
     1621 gccgtgccgc cgatacgctt ctgtcgcgcc aagcgcatcg aaagctgttg cgccaaaagt
     1681 tcgtcgaatt tgagccgttg ccatgcaggc agcgtgccgt ctgaaagctg atgaatcgtg
     1741 aaactcggcg gcggcgaatg caaaagacgc aggctttcgg cgaggtgtgg cagcttcaga
     1801 cggcacagca gggcatcggg cagcgtgtcg tgcagcggcg taacgtccaa cgccgtctga
     1861 ataatacggc gcaaagtggg ctggttcaaa ccgtttacgg tcgggtaaac cggcgtgagg
     1921 ctttccgcca aaccgccgcc ctcggcatcg cggattttgg gatgaatcat ctcgtcgccg
     1981 taaaagccgt gtttgatttc gcccacggcg cggatgcgtt tgccgatcgc cgtctgtttc
     2041 tgatggctgg cgtaaaagtg gatgaagcgc agaaaaagga cgctgccgga gccgtcggcg
     2101 atttggacaa tcagctgctt gcgcggtttg aacgttactt cctgatggat aacctccccc
     2161 tcgacctgac acggcacgcc aatcggcgcg tccttaatcg gcataatgtg cgtctcgtcc
     2221 tcgtaacgca gcggcaggtg caacaccaaa tcccacgcgg tatggaggtt gagtttgtcg
     2281 agcttcttgg cggaaacatc ggtgattttg agctgttttc gggtttcggg cgacatcata
     2341 ggcagattcc tttggacgcg cctattttat ccgaaaacaa aaatgccgtc tgaaacggat
     2401 tcagacggca tcgacaggca ggaatcaagc tccggcggct tcggcttcct gctgttgttg
     2461 gtaaatcgcc tcaaaattaa tcggcgcgag caggacgggc gggaagccgg cgcgcgttac
     2521 cgtaccggaa acggcttcgc gcgcgtaagg gaagaggatg ttcggacacg ccacgccgag
     2581 cagcaggtcg gcatcttctt cggggatgtt ttccaaacgg aaaataccgc tttgggttac
     2641 ttcgttcaaa aacatcgtgc gctcgttatc caatttggcg gttacggtaa cggttacatc
     2701 cacgttgtag tagccgtctt ccagcttttg gctgccggtg gaaacgcgca tatccacttc
     2761 gggctcgccc tgttccaaaa agatttgcgg cgcgtgcggc acttccaaag acaagtcttt
     2821 gacatacagt cgctcgatgc tgaatacggg ttgcagttct tcgctcattt tgttttccta
     2881 gttgggggtt aagggttcag cagtccgtcc agcccgcctt cctgctggag gcggtagagg
     2941 tcggtaaatc cgccgacgtg cgtttcgccg atgaaaatct gcggcacgct gcgctgtccg
     3001 gaaagctgct gcatttcggc aaaggcttcg ggacttgcat cgacacggat ttcgtcgata
     3061 tgtccgacac ctgccgcgtg cagcagcctt ttcgccatcg tgcagtaggg gcaaaacgga
     3121 cctgtgtaca tggtaacggt ctgcatattg ggtttccgaa agttttgcaa tgataatcaa
     3181 tataggggca tttcccccgt ttggcaagtg cggaacagat gcacgttcaa acggcatgtg
     3241 cggaatgtgt caaagtttct tttttaaagt atgatagaca ttgtgaaaaa tatttttgca
     3301 cccgcgctgc gcggcggaac ggatgcaaaa atatttttat tacattttca ggaaaaacca
     3361 tgttgtcagg actccccatc cccaaagaca tcgcgcgccc gcccgaaacg atattggtca
     3421 acatcacgcc gcaggaaacg cgcgtagcgg tgttggagga aaacaatatc tgcgagctgc
     3481 acatcgagcg caacagcgaa cacagcctgg tcggcaatat ctatctgggc gtggtgcgcc
     3541 gcgtgctgcc cgggatgcag agcgcgttta tcgacatcgg cttggaacgc gcggcgtttt
     3601 tacacatcgt cgatgtcctc gaacaacgcc gcaaccccga agaaacccag cgcatcgaac
     3661 atatgctgtt tgaagggcag tctgttttgg tgcaggtcat caaagacccg atcaacacca
     3721 aaggcgcgcg gctttccacc caaatctcgc tggcggggcg tttcctcgtc catcttccgc
     3781 aagaagacca catcggcgtg tcccaacgca tcgaagacga tgccgaacgc agcagcctgc
     3841 gcgaacgcct cgacaagctc ctgccggaaa atgcctgccg gggctacatc atccgcacca
     3901 acgccgaaaa cgccaccgac gaacagctcc agtccgacat cgactacctg accaaagtgt
     3961 gggaacacat ccaagaacag gcgaaaatcc ggccgccgga aaccctgctt tatcaggatt
     4021 tgcccttgag tttgcgcgta ttgcgcgata tggtcggctg cgacacgcaa aaaatcctcg
     4081 tcgattccac cgtaaaccac gggcgcatga cgcgttttgc cgaacaatac gtccacggcg
     4141 cattgggcag gatagaattg ttcaaaggcg aacgcccgct gtttgaaacc cacaacgtcg
     4201 aacaggaaat cagccgcgcc ctgcaaccgc gcgtcaacct caacttcggc agctacctga
     4261 ttatcgaatc caccgaagcc atgaccacga tagacgtgaa caccggcggc ttcgtcggcg
     4321 cacgcaactt cgacgaaacc atcttccgca ccaacctcga agcctgccac accatcgccc
     4381 gcgaattgag gctacgcaac ctcggcggca tcatcatcat cgacttcatc gatatggcgc
     4441 aggaaagcca ccgcgaagcc gtgttgcagg agcttgccaa agccctcgcc ttcgaccgta
     4501 cccgcgttac cctgcacggt tttaccagcc tggggctggt cgagctgacg cgcaaacgct
     4561 cgcgcgaaaa cttaaaccaa gtcctctgcg aaccctgccc ttcctgccaa ggcagaggcc
     4621 gtctgaaaac gccgcaaacc gtgtgctacg aaatccagcg cgaaatcgtc cgcgaagcgc
     4681 gccgttacga tgccgaaagt ttccgcatcc tcgccgcccc caacgtcatc gatttgtttt
     4741 tggacgaaga atcgcaatcc ttggcaatgc tgatagattt catcggcaaa ccgatttctc
     4801 tggcggtcga aaccgcttac acgcaggaac aatacgatat tgtgctgatg taaaaaatgc
     4861 cgtctgaagc cttcagacgg catctgtcta tttcagggtt tccttgtcca acaaggcgcg
     4921 tatcagcaga ccgtgtccga acctgcggct gtcggtcagt tccaaatatc cgccgtattt
     4981 tttggctagc gtgtcggcaa tcgacagccc cagccccgtc ccctgctgct ccgttcccaa
     5041 aatacggtaa aacggatcga ggacgcggac gcgttcggat tccggaatgc cgttcccgtt
     5101 atcttccacc cacacggcaa gatatttccc ttcgtctgtg aaacccaaat ctatcctgcc
     5161 ttcggacggg gtataacgta ttgcgttatc aacaaacgtt ttaaccaagg tatagatttc
     5221 agtttcatcg gcaaatattt cgacatcacc tccgaccgcc acaccaatgt cctgacgttt
     5281 ttccaaggca agcggcatca gttcctgcaa cacttggcgg aaacggcttt gcagaccgaa
     5341 tgtcgttttc gccaaagggg tttcgtccga ctgcgaacgc gccagtgcca aaagctgctc
     5401 gagcaggtgt ttgttgcgcc gtatgctttg ctgcaaaacg gcagactgcc gcgccgcatc
     5461 gggtggcaga gacatattgt tgagccgttc cgcctgaagg gaaagggctg tcatcggcgt
     5521 acgcaattcg tgtgccgcgt cggcgacaaa ccgctgacgg tggcggatgt cttcatccgc
     5581 acgtttcaaa agcaagttga tggcggttac gaaccctctg atttcactgg gaatattgtc
     5641 cacactcaag gcagacaggt cattgattcg gcgttgttcg agactttgcg acaatttgcg
     5701 gacggggcgc atggctttgt gcgtaatcca cacggtcagc agtatcatca gcggcagtgc
     5761 cgccagcagg ggcaacacgc tttgccgtgc cgcatccgcc gccaaatctt cacggtattc
     5821 gttttcctgc atgacggcaa tccgtccctg ttcggtcgtg cggatataga cgcggtaata
     5881 atcgtcgtcc ccgtccgcct gaagcgtgtg cagaccgtcc gccagatgcg caggcaggct
     5941 gacaacaggg tcttcctgct gcggcatctg cacgaaaatg cgcgtatcgc cgtcgccctc
     6001 gggcaaagtt tcgggtttgg aatcgggggc gacgtacaat gccgcctgac ggagcaggtc
     6061 gtcctgcaac gcttccgttt cgtggaaggt ttcgtagtag gaaaacatac ctgcaagcat
     6121 tgccagcgga acaaacatcc aaaccgtccc gccccagcaa acccaaatcc agcagcatca
     6181 agtcataagg ctgggcagcg gcagccgcgc gccgtttttg acccaatcca ccgcatagcc
     6241 gccgtctttc aaacttgccg acaccgcctc cgcaatcatc gcatcgtctt ccaccagcaa
     6301 aacacgcatc aactttccct tcaaaataaa ccgtgcctat tctaacaccc caaaattagc
     6361 cgcaatttag cggcctttac gcttgccggt atttttcaaa actgcggcac aaaaaaccgc
     6421 gccggcaact gccttcagac ggcattgggg cgcgattgca acacacgggc aggcaggcag
     6481 agcctgcgac agaccacagg aacgattcgg gcttcagacg gcttcgccgt ttacggcaga
     6541 ggcacgattc ctgccgctat cgaactggcc aatatcgcca gcgacaaacc ccacgcccaa
     6601 aaaaacgaat aacggatgtg tttgcccatc gacaatttcg ccaaacccaa gcccatccac
     6661 aaagccggcg aaagcggcgt aacaaaagtg ccgacgatac tgccgatcaa catcgcataa
     6721 cctgctgctt cgggcgccac gcccgcctgc gaggtaatct gctccacaat cggaaacagt
     6781 ccgaaataat aagcgtccgt actcaaaacc aactcaagcg gaatgcccaa cacaccgatg
     6841 gcaatatgca gataaggcag cagcgcgtcc ggcaggatat gcacaatgtc tttggaaatc
     6901 gcgtccaaca tccccgcacc cttcaaaatc cccaaaaacg tacctgccgc caaaataatg
     6961 gacgccatca tcaccgcgcc gccggcgtgg gcataaatcc gctccatctg ttcctgcggg
     7021 ctgcggtaat tcaaaagcaa cgccgccgtt gcagccagca taaatacata acccggcggg
     7081 aagatgcccg aaaaaagcag gctcatcgcc gccaaaaaca gcaggacatt ccaccaaaac
     7141 agtttcggac gcgccaattt ttgttcttct tccgacaaag gcaccggctt tatcaaatcc
     7201 gccacggcgg gcaacgcgcc caactcccgg acaatccgcc ttttttcacg cacacccaaa
     7261 agcagggaca gcgcaaggat aaacactaca ccgataattt gcaccgtcaa caaaggttta
     7321 tacaattcgc ccacatctgc gtccaacacg cttgcaaccc gcccagtcgg cccgccccac
     7381 ggcagaaggt taatcaatcc cgcactggaa gtcagcagca aaaacagcag gtaaggattc
     7441 atatgcagac gcttgtaaag cggcaaaagg gcggggacga ccaataaaaa cgtcgtcgca
     7501 cccgccccgt ccaactgcgc caccaccgac accaagaccg tccccacact cactgccacg
     7561 atattacccc gagtcagctt aatcaaaccg cctatcatcg gacggaacag ccccacatcg
     7621 ttcatgattc caaaaaacaa aatggaaaac ataaacataa tcacaatctg catcaccgat
     7681 ttggtgccgc ccgaataaaa ttcttttaat tgggatacat caaaccccgc cagcaacgcc
     7741 ccaaacagcg gcaccaagat taatgcgatg atgggcgaca ctttttccgt cagcagcaac
     7801 catacgatga ccccgataat cagcagtccg ataaacgtca gcatcatttc tcctttattt
     7861 tattttaaac agaaaaccga ccgtgcaggc aaaaccgccc acagacgcgg gataagcctt
     7921 gcattctact tttttatttt gaaacaagtc aatcggtcat ttcctcccat ttacgcctgc
     7981 cgccattcct gtatccgtcc gtcatttcac ggcggcaacc gatacggaac aaccggcaaa
     8041 ccggtatcgg gacggcgcgg gggcattcat cccggtgcgc cgattcaaac gaaaccgccc
     8101 ctatcattgc ggagcgcggg gcgtgccgta cacgcgggat t
//
LOCUS       DAWGBY010000085         8067 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.085, whole genome shotgun sequence.
ACCESSION   DAWGBY010000085 DAWGBY010000000
VERSION     DAWGBY010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8067
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.085"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            107..1048
                     /gene="miaA"
                     /locus_tag="WHG62_001529"
     CDS             107..1048
                     /gene="miaA"
                     /locus_tag="WHG62_001529"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ1725617.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYTGM
                     DIGTAKLSASERAFVPHHLIDIITPVQTYSAARFVEDCTRLVGEISSRGRFALIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQQVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1052..1771
                     /locus_tag="WHG62_001530"
     CDS             1052..1771
                     /locus_tag="WHG62_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family DNA transformation protein"
                     /protein_id="HEZ1725618.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1776..2264
                     /locus_tag="WHG62_001531"
     CDS             1776..2264
                     /locus_tag="WHG62_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEZ1725619.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALAGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTTFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2330..3082
                     /gene="rlmB"
                     /locus_tag="WHG62_001532"
     CDS             2330..3082
                     /gene="rlmB"
                     /locus_tag="WHG62_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ1725620.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGESDLYHCNLPDSTAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNKKA"
     gene            complement(3144..4519)
                     /locus_tag="WHG62_001533"
                     /pseudo
     CDS             complement(3144..4519)
                     /locus_tag="WHG62_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
     gene            4899..5774
                     /locus_tag="WHG62_001534"
     CDS             4899..5774
                     /locus_tag="WHG62_001534"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ1725621.1"
                     /translation="MLQGSLVALITPMNQDGSIHYDQLRQLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHLSVIEETVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAVPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNVGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGNIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCGPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            5783..6979
                     /gene="bamC"
                     /locus_tag="WHG62_001535"
     CDS             5783..6979
                     /gene="bamC"
                     /locus_tag="WHG62_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ1725622.1"
                     /translation="MPSEPFGRHNMTNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIESEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGDKNKDTTMWQPSASDPNLEAAFLTRFMQYLGVDGRQAENALAKKPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTGLALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVADGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(7036..7968)
                     /gene="pip"
                     /locus_tag="WHG62_001536"
     CDS             complement(7036..7968)
                     /gene="pip"
                     /locus_tag="WHG62_001536"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ1725623.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAEDRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDKAILNNIGKIRHIPTVIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHCAFDPPLADALVQAVEDILPRLL"
BASE COUNT         2071 a         2616 c         1873 g         1507 t
ORIGIN      
        1 gcatacggta aacacgcccc cttgccgtcg gcgtgcttcc gcaaaccaaa atataacgtc
       61 ggcacgcttt ccgctataat ccgcattttc gcaaccctga aacatcatgc cgaccccgaa
      121 agcctttgcc ctgctcgggc cgaccgccgg aggcaaaacc gcgctcgccc tcaaaattgc
      181 cgaaaccctg cctgtcgaaa tcatcagcct cgattccgcg ctggtctata ccggtatgga
      241 catcggcacg gcgaaactgt ccgcctccga acgcgccttt gtcccgcacc accttatcga
      301 catcattacg cctgttcaga catacagtgc cgcccgtttt gtcgaagact gcacgcgctt
      361 ggtcggggaa atttcctcac gcggcaggtt tgcccttatt gtcggcggca caatgatgta
      421 tttccgcgcc ctgacccaag gtttgaacga tttgcccgaa gccgatgcct gcctgcgtgc
      481 cgacttggac gaacaaaaac aaatgtacgg cttggatttc ctctaccgca ccctgcaaca
      541 ggtcgaccct gaaacagcat gccgtctgaa accgaacgac agccagcgta tcggacgcgc
      601 tttggaagtt tattatttaa ccggcaaacc gatgagtacg catctcggca gcccaacctc
      661 ccatacgctc cccttcgatt tgcataccgc cgccctgatt cccgaaaacc gcgcccgcct
      721 gcatgaaaac atcgccctgc gtttccacct gatgcttgaa cagggcttta tcggcgaagt
      781 agaaaacctg cgccgcctct atcccagcct gaccgccgac tcccctgcca tacgctgcgt
      841 cggctaccgt caggcatggg aatatctgga cggaaaaacc gatttcccgg catttgtcga
      901 gaaaggcatt gccgccacgc gccaacttgc caaacgccaa ctgacttggt tgcgcaaaac
      961 acctttagac tgcgttaccg acccgttttc agacggcaat tcatgcacac gcctgattga
     1021 ggcggcaaaa cggtttttcg gcgcataaac tatgctgacc acgccgccgc tcgcccccaa
     1081 aaccgtcgcc gccctacaca ggctcggtat ccgtacgctc gaagaactgc ggcaaaacgg
     1141 cgcggttcaa accttcttgt tattgaaggc atcaggtttg accctcacga aaagcacgct
     1201 gtggcagctt cagtcgctgc tggacggcac gccgccgcaa gaaatggcgc aacacgataa
     1261 aacccgcctg cttgccgagt tgaaaaacca tccgcccgtc gccgcctttc ccccgcaagg
     1321 cgaaatggcg catttcatgg gtttggcatt ggaacaggcg aaactgtccg cattaatggg
     1381 cgaaataccc gtcggggcag tcatcgtttc agacggcaaa atcatcgcat cggcacacaa
     1441 cacctgcatt gccgactgca atgtcagctg ccacgccgaa atcaacgcct tggcacaggc
     1501 aggcagcgaa atgcaaaact accgccttga cggatgcgac atctacatca ccctcgaacc
     1561 atgcgccatg tgcgcgtccg cactgataca ggcacgaatc aggcgcgtga tctacggtgc
     1621 ggcagaaccc aaaaccggcg cggcaggaag catcgtcaac ctgtttgccg acaaacgcct
     1681 caatacgcac accgccatac ggggcggaat cctgcaagaa gaatgccgcg ccgtattaag
     1741 ccgttttttc caaaacaaaa gaaaaggttg aacctatgac cgccttgctc gtcatcctcg
     1801 ccctcgccct gatagccgcc ggtacggcgg gcatcgttta ccccgccctg cccggattgg
     1861 cattgatgtt tgccggaacc tggctgctcg cctactccgg cggctaccaa atctacggcg
     1921 cgggcgtttt gtggacggtc ggactcatca gccttgccgg catactggcg gactatgtgg
     1981 caggcatatg ggggacaaaa tataccggag cgggcaagct cgccgttcgc ggcgcattgg
     2041 ccggcagcat catcggcata tttttctccc ttcccggact aatactcggt ccctttatcg
     2101 gcgcggcggc aggcgaactg atcgatcggc gcaatatgct tcaggcaggt aaagcgggct
     2161 tgggtacgct gttggggctt atcgtcggta cgacattcaa aatcggctgc gccgtatcca
     2221 tcttgtttat cctgttggtg aaatacatcg cctacctgtt ttaacccctt cagacggcat
     2281 accggcaaat tgctataatg ccgtctgaac ccttttcaca aagcaccata tggcaaacca
     2341 aagacctatc tacggcttcc atgccgtcaa cgcccgattg tggcaaaacc ccaaatccat
     2401 cgtcgaactc tatgtccaag aaggcaaaaa cgatgtacgc acgcgcgaag tgttggaaaa
     2461 ggcggcaaac gaaaacatcc gcgtatattt tgccgatgcc gaccgcctca acgccatcag
     2521 caaaggtgcg cgccatcagg gcgtggtcgg atttatcgat gcctccaaaa accacgtcca
     2581 cctcgaagac gtattggaaa acttaagcga accgccgctg ctgctgatac tcgacggcat
     2641 caccgatccg cacaacctcg gcgcgtgcct gcgtaccgcc gacgcaatgg gcgtacatgc
     2701 cgtcatcgca ccgaaagaca aaagcgcggg gctgaacgcc accgtcagca aagtcgccag
     2761 cggcgcggcg gaaaccgtcc cctacatcac cgtaaccaac ctcgcccgca ccctgcgcga
     2821 attgaaagaa tacggcattt ggatcatcgg caccgatatg ggcggcgagt ccgaccttta
     2881 ccattgcaat ctgcccgaca gcacggcgtg ggtgatgggc aacgaaggcg acggtatgcg
     2941 ccgcctcacg cgcgaacatt gcgacatgct ggtgtccata cccatgttcg gcacggtcga
     3001 aagcatgaac gtctccgtgt ccgcaggaat ggtattaagc gaaacccgcc ggcaacgcgt
     3061 attgaaaaac aaaaaagcgt aagcctcaaa aacaatgccg tctgaaacag ggattccgtt
     3121 tcagacggca ttcgttttca aaatcagtgt tccaaatggt cggtatcaaa cttgaccgcc
     3181 gcctcggttt tatcttcggg caagaccaaa ttcagcaaga ctgccgtaat gccgccgccg
     3241 gaaatagagt tttggaacaa gacgggcagg tttttaaaca cttccggctc aaaccccacg
     3301 cccaagccca aaccgaccga cgttgccgca atcaccgcct cgcgcctgcg gatgccgtgg
     3361 ccgaccaaaa tccgcacgcc cgcaatcgca atcaggccga acatcaaaac catcgcgccg
     3421 cccaacaccg gactcggaat cgtcgtaaac gcgcgtccga caacggggaa cagacccaac
     3481 agcaccaaaa tcacggcaat atatttgccc acgtggcgcg aagccacgcc ggtcatctga
     3541 atcacgccgt tgttttgcgc aaacgtcgtc agcggcagcg aacccaaagc cgtcgcaatc
     3601 accgatacca agccgtcagc caacacgccg ccgcgcaggc gtttggtgta ttcttcgcct
     3661 tcaatcggct ggtcggacac cattgccgtt gccgtcaaat cgccgaccgc ctcaaacacg
     3721 cccaacaaga aaatcgcacc cgccgcaata aatgcgtgcc agtcaaaagc aaaaccatat
     3781 ttaaacggta cgggcagcgt aaccggcggc aggttttgca gtgcggaaaa atccaccttg
     3841 cccaaaaaca gcgcgacaat agtagccggc aatcagaccg accgcaatgc cgctcatccg
     3901 cagcagcgga tttttcatgc agttgaacac cagcacaatc agcagcacca gcgaagccag
     3961 ccccaagttt tccatcgagc cgaacgtgcc gtccgccttc gcgccgaagc cgccgccgaa
     4021 atcggcaata ccgacgtgta ccaaactcag accaatcagc atcacgacca cgccgctgac
     4081 cgtcggcgta atcacttttt tcaaatacgg cagcagccac gccgagaaac acaccaaaaa
     4141 cgcaccggca aacgatacgc ccaagagcgt cgaaaccatc gccccctcac tcaaaccgcc
     4201 ctctttcatc cccgcgccga gcgcaatcat gacggtaacg ctggatggac agcatccccg
     4261 agccgaccgg cccgaagcgg ttgacctgca aataagtgcc gacacccgac gcaaccatcg
     4321 ccatcgacac cagatacgcc gtcatctcca ccggcaattc cagcgcgccg cccacaatca
     4381 gcgcgggcgt aatcatcggc acgaaaatcg ccaaaagatg ggtaaccgcg ctcaagagcg
     4441 cattaccgaa cggcggcctg tcttccaaac cgtacaccaa atcaggcgaa tccgcctgtt
     4501 ttttcattgt ttcagccatt ggagtctttc tatccgttgc caaacgttaa aaaattttaa
     4561 gaacgaaatt gtaacgaatc aaagattcct tatcaattca aatcctcatg tgcaaaaaca
     4621 ccaccggttg tccgaattca aatttctttg aatttccgca ccggacagtc cttcatttcc
     4681 agagagcctt catgcgctta acacatttta atcctcaacg gcgcatccac tgcttaaacc
     4741 caataatttc atgattataa aaaaaatatt atttattaag atatgatagg acttaagcct
     4801 tggaaccaac cgtgcggccg atatgtttca cacaaacaac aaagtaagct acaatccgaa
     4861 gcataatcga cctcactcaa tgaataaaag gtttccgtat gttacaaggt agcttggttg
     4921 ccctgattac cccgatgaat caagacggca gcatccatta cgaccaactc cgccaattaa
     4981 tcgactggca catcgaaaac ggcacggacg gcatcgtcgc tgtcggcacg acaggcgaat
     5041 ccgccaccct ctccgtcgaa gaacatttaa gcgtaatcga agaaacggtc aaacacgttg
     5101 ccaaacgcgt ccccgtcatc gccggcacag gggcgaacaa caccgtcgaa gccatcgccc
     5161 tttcccaagc cgccgaaaaa gccggcgcgg actacaccct ctccgtcgtc ccctattaca
     5221 acaaaccttc ccaagaaggc atgtaccgcc atttcaaagc cgttgccgaa gccgccgcgg
     5281 ttccgatgat actctacaac gtgcccggca gaaccgtcgt cagcatgaac aacgaaacca
     5341 tcctgcgcct tgccgaaatc cccaacatcg tcggcgttaa agaagcaagc ggcaacgtcg
     5401 gcagcaacat cgaactcatc aaccgcgcgc ccgaaggctt cgtcgtcctt tccggcgacg
     5461 accacaccgc cctgccgttc atgctctgcg gcggacacgg cgttattacc gtagccgcca
     5521 acgccgcgcc caagctcttt gccgatatgt gccgtgccgc gctgcaaggc aacattgccc
     5581 ttgcacgcga actcaacgac cggctgattc cgatttacga caccatgttc tgcgaaccca
     5641 gtcccgccgc accgaaatgg gcggtatccg ccttgggcag atgcggaccg cacgtccgcc
     5701 tgccgctcgt tccgctgacg gaaggcggac aggcaaaagt ccgcgccgcc ctgaaagcct
     5761 caggacaact ttaaatatag ccatgccgtc cgaaccgttc ggacggcata acatgacaaa
     5821 cactttaata tccatcacac aggatgacac gatgacccat atcaaacccg tcattgccgc
     5881 gctcgcactc atcgggcttg ccgcctgctc cggcagcaaa accgaacagc ccaagctcga
     5941 ctaccaaagc cggtcgcacc gcctgatcaa actcgaagtc ccgcctgatt tgaacaaccc
     6001 cgaccaaggc aacctctacc gcctgcctgc cggttcggga gccgtccgcg ccagcgattt
     6061 ggaaaaacgc cgcacacccg ccgtccaaca gccagccgat gccgaagtat tgaaaagcgt
     6121 caaaggcgtc cgcctcgagc gcgacggcag ccaacgctgg cttgtcgttg acggcaaatc
     6181 ccccgccgaa atctggccgc ttctgaaagc cttttggcag gaaaacggct tcgacatcga
     6241 atccgaagaa cccgccatcg gacaaatgga aaccgagtgg gcggaaaacc gtgccaaaat
     6301 cccccaagac agcttgcgcc gcctattcga cacagtcggt ttgggcggca tctactccac
     6361 cggcgagcgc gacaaattca tcgtccgtat cgaacagggc aaaaacggcg tttccgacat
     6421 cttcttcgcc cacaaagcga tgaaagaagt gtatggcgac aaaaacaaag acacgaccat
     6481 gtggcagcct tccgcttccg accccaacct tgaggccgct ttcctgacgc gctttatgca
     6541 atatttgggc gttgacggac ggcaggcgga aaacgcattg gcaaaaaaac cgacccttcc
     6601 cgccgccaac gaaatggcgc gtatcgaagg caaaagcctg attgtctttg gcgactacgg
     6661 cagaaactgg cggcgcaccg gccttgccct cgaccgcatc ggactgaccg tcgtcggtca
     6721 aaacaccgaa cgccacgcct tcctggttca aaaagccccg aacgaaagca atgcagttac
     6781 cgaacaaaaa ccggggctgt tcaaacgcct actgggcaaa ggcaaagcgg agaaacctgc
     6841 cgaacagccg gaactgattg tctatgccga gcctgtcgcc gacggttcgc gcatcgtcct
     6901 gctcaacaaa gacggcagcg catatgccgg caaagacgca tccgcactgt taggcaaact
     6961 ccattccgaa ctgcgttaaa ccgttcaaaa caaaagcagc ttccaaacag aagctgcttt
     7021 tttgtgcgga actttttaca acaaacgggg caaaatatcc tcaaccgcct gaaccaacgc
     7081 atccgccaaa ggcggatcga acgcacaatg ccccgcctgg accaccctca attccgcttc
     7141 gggaaaggct ttcgacagcg cccacgcact ctgcataggc gtacacaaat cataccgccc
     7201 ctgcacgata acggtcggga tatgccgtat tttgccgata ttgttcaaaa tcgccttatc
     7261 accctgcaac caaccgccgt tgacaaaata atggttttcc aaacgcgcga ttgccagcga
     7321 ggcataagca tcttcatcca cttcctccgg ctcgaaacgg atcagatagc tttcccaatc
     7381 cgcccaagcc tttgcggcag acaggcacac ttcttcatct tgatgaaaca gcaacccgtg
     7441 atacgcctca atcagccggt tccgccgatc ttcagcaatc ggcgcgacaa atttttgcca
     7501 ttgttccgga taaatccggc tcacaccgcc cgcctcgttc agccacgccg tttcagacgg
     7561 cctgcacaaa aatatcccgc gcaacaccaa tccctttacc cgttccggat gggtttgggc
     7621 ataagccagc gacaaagtac tgccccacga accgccgaac accagccatt tcccgatacc
     7681 cagcatttca cggacttttt caatatccgc caccaaatcc caagtcgtat tgtcttccgc
     7741 acaagcatac gggcgcgaac gtccgcaacc gcgctggtca ataatgacga tgcggaacac
     7801 atcgggattg aaaaaacccc gacattcagg cgaagccccc gcccccggtc cgccgtgtaa
     7861 aaaaatgacc ggcacaccgt cgggattgcc cgactcttcc caataaattt gatgaatttc
     7921 agacacctgc aagtatccgc tatgaaaagg ctgttttatc tcatacatca tcttctccca
     7981 tattgcctct gacaatccga acattcccac acgcaacatc acgcacgaaa cacaagccgc
     8041 cccgaaaggc aaattccgaa aaatcgc
//
LOCUS       DAWGBY010000086         7939 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.086, whole genome shotgun sequence.
ACCESSION   DAWGBY010000086 DAWGBY010000000
VERSION     DAWGBY010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7939
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.086"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(220..2910)
                     /gene="glnE"
                     /locus_tag="WHG62_001537"
     CDS             complement(220..2910)
                     /gene="glnE"
                     /locus_tag="WHG62_001537"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ1725624.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVWTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFSYAYYQDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFIYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRKLHRQIHS
                     EVGKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTRETLEKLAESGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQRQLLAESMGFDDYADFLNAL
                     NQHRNQVNRLFNEILSEPEEQTQSNSEWQWVWQDKPDEEERQGRLKEHGFDAETIATR
                     LDQIRHSHKYRHLSAHAQPRFDAVVPLFVQAAAAQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNWLSTATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALADEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLDNYGNIALLNIATDCGLIDKTLAEQSRTAYRFYRRQ
                     QHNTKLRDAEKTEVSGELLAHYGNVRKLWREVFGEEAATA"
     gene            complement(3128..3310)
                     /locus_tag="WHG62_001538"
     CDS             complement(3128..3310)
                     /locus_tag="WHG62_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725625.1"
                     /translation="MGFWNGVAKAVGEGMIEAGNEHKALKMEYAEKSSEELHEIVKSD
                     GFLKIPHGRKVRLMLF"
     gene            complement(3447..3920)
                     /locus_tag="WHG62_001539"
     CDS             complement(3447..3920)
                     /locus_tag="WHG62_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ1725626.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(3973..4254)
                     /locus_tag="WHG62_001540"
     CDS             complement(3973..4254)
                     /locus_tag="WHG62_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725627.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            complement(4341..4664)
                     /locus_tag="WHG62_001541"
     CDS             complement(4341..4664)
                     /locus_tag="WHG62_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725628.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            complement(4997..6004)
                     /locus_tag="WHG62_001542"
     CDS             complement(4997..6004)
                     /locus_tag="WHG62_001542"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ1725629.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNMVYKLGLIPVTGNRTKPV
                     KLMGLDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPNPQPGNPQPRLFRVPE
                     YQGIINRMGFNNHGIDAMIQNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVHGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAAEKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            6236..6472
                     /gene="acpP"
                     /locus_tag="WHG62_001543"
     CDS             6236..6472
                     /gene="acpP"
                     /locus_tag="WHG62_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ1725630.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            6628..7875
                     /gene="fabF"
                     /locus_tag="WHG62_001544"
     CDS             6628..7875
                     /gene="fabF"
                     /locus_tag="WHG62_001544"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ1725631.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
BASE COUNT         1849 a         2116 c         2019 g         1955 t
ORIGIN      
        1 tcttatttgt ttgttttgat ttttgcttgg ataaaaaatc ccatcattcc cacaaaaaca
       61 gaagcctgaa atcccgtcat tcccgcgaaa gaggaatccg gtttttgggt ttcagccatt
      121 cccgataaat cgctttagct ctgccgcaac cttaaaacgg cacggtacga aaataccgtc
      181 tgaaacccag attgtcaggc ttcagacggc attttttatt caggcggttg ccgcttcttc
      241 gccgaacact tcccgccaca atttcctgac attgccgtaa tgtgccagca attcgccgct
      301 tacttcggtt ttttctgcgt cgcgcagttt ggtattgtgt tgctgccggc ggtagaagcg
      361 gtaggcggtg cggctttgtt ctgcaagggt tttgtcgatg aggccacagt cggtggcgat
      421 gttcaagagg gcgatgttgc cgtagttgtc caagagttgc ggatattttc gggcgtgggc
      481 aagtatcaga tattggacga taaattcgac atcaaccacg ccgccgcgtg cgtatttgac
      541 gttgctgtcg gctgggggat gagtggggaa cattttttcg cgcatttcga tgatttcgtc
      601 tgccaaggcg gtttggtcgc gttcggcggt aaggatttcg gtgcggatgc ggtcgaatgc
      661 cgtctgaatt tcgggtgtgc cgcagatgaa gcgggcgcgg gtaagggact ggtgttccca
      721 cgtccacgcg ttttcgcgct ggtatttttc aaaggcggcg atgctgtgcg cgaggaaacc
      781 tgcgtcgccg ttggggcgca ggcgcaggtc ggtttcgtag aggctgcctg cgccggtggc
      841 ggtggaaagc cagttggtca ggcggcgggc gaggcggctg tacacgtcgc ctgcttcggg
      901 atggggatcg tcgtaaagat agaccaagtc gaggtcggag gcgtagccga gttctttgcc
      961 gccgagcttg ccgtagccga cgacggcaaa ttgcggggtg tcgcggtgtt ttttgggcat
     1021 gtccgcccac gcgcacagca gggcggcggc gaggatggtg tcggcaaggg cggagagctg
     1081 gtcggagagg gattctaccg tccacagtcc ggcgaggtct tgaacggcga ggcggaagac
     1141 ttgggcgtgt tggaaatggc gcagggtgtc catttgcgct tcagtatcgc cgccgcaggc
     1201 tttgaggtcg tctgaaaggg cggcggcgag cgcctgccaa tcaaacgcgg tatccaaaag
     1261 ctgcgcgctg atgagttcgt ccaacaaaat cggatatttg ttcagatacg ccgccaccca
     1321 agaactttgg cccataatct gcgccagttg cgccaaggtt tgcggatgtt cgttgaggaa
     1381 ggcgagatag gcggatcggc ggctgatgtt ttcgagaaaa tccaacagcc gcatcaatgt
     1441 atcggtcggg ttgctttgcg ctgccgccgc ctgtacgaac agcggcacaa ccgcatcgaa
     1501 acgcggctgg gcgtgtgcgg agaggtggcg gtatttatgg ctgtggcgga tttggtcgag
     1561 ccgcgtggca atggtttcgg catcaaaccc gtgttctttc agacggcctt gccgttcttc
     1621 ttcgtcgggc ttgtcctgcc aaacccattg ccattcgctg ttgctttgcg tttgttcttc
     1681 gggttcgctc agaatttcgt tgaacaaccg attgacttgg ttccgatgtt gatttaaagc
     1741 attcaaaaaa tcggcgtaat catcaaatcc catactttcg gcaagcagtt gccgctgttc
     1801 gggcgaagcc ggcagggttt gggtttgccg gtcgtcccaa tattgcaaac gatgttcgac
     1861 atcgcgcaaa aagcggtagg cggcaagcag ggtttcgacg ttttcagacg gcataatgcc
     1921 cgattcggcg agtttttcca gcgtttcccg cgtgcctttc agttgcagcg cgcgcatttg
     1981 cccgccgcgt atcatctgga aaatctgggc gataaattcg acttcgcgga tgccgcccgc
     2041 gccgagtttg atgttgtccg ccatcccttt tttgccgact tcgctgtgga tttggcggtg
     2101 cagcttacgc atcgcctcat acgcgccgta atccagatat ttgcggaaca cgaaggggcg
     2161 caccagcgat ttgatgtcgt tcggatacgg cgtgaccacg cggcctttgc accacgcgta
     2221 gcgttcccat tcgcgcccct gcgtaatcaa atattgctcc agcgcggttt cgctcaatac
     2281 cagcgcgccc gaatcgccgt ccggccgcag ccgcatatcg acgcggaaca cctgcccgtc
     2341 ggcggtaatg tcattcagca acgcaatcag tttctgcccg actttggtga aaaattcctg
     2401 attgccgcgt tcgcgcctac cgtcggtatc gcccgattcg gggtagataa aaattaaatc
     2461 gatgtcggaa gacacgttca actcatagcc gcccgccttg cccatcgcca ccacgctcaa
     2521 atgctgcggc gatttggtat aacgcccgat cggcgtgccg tacatatcct gataataggc
     2581 gtatgaaaaa tccaatgcgg tattcacagc aaaatcggca aacagcgtaa tcgtgcgggt
     2641 tacttcgttc aaatcgctga tgcggttgat atcgcgcacg ataatctgcg acaccacata
     2701 acggcgcaac ccgcgcaact gccgcgccaa ttcttcctcg ttttcttccg cacggatttt
     2761 gtcccagtcg gcaaaggctt ggaaatccgc ttcggtccaa accttgtcca gcataggcag
     2821 gaaaatttcg ggcttgagtt tgccgttgtc gagctggcgg gcgaggaaga gggaatggcg
     2881 gcgggcggtg tcgaggcggt tgtcggacat ttcggattcc gtttgaaaaa atggcaggaa
     2941 gatgatggcg gattcacttc aaatcaggac agggcgaggg gatgccgtac cggtttaaag
     3001 tcaagccact atatcatagc aaccttcgat gccgtctgaa accttgcccc gacatccaga
     3061 cggatgcctg ccgataaaaa acagcggcaa atgccgccgt ttcctgttca cacctcgcca
     3121 cgctctttta aaatagcata agccgcactt ttctcccgtg tggaattttt aaaaaaccat
     3181 cactcttgac gatttcatgc agctcctcac ttgatttctc cgcatattcc attttcaacg
     3241 ccttatgctc attgccggct tcaatcattc cctctcccac tgcttttgcc acaccattcc
     3301 aaaaacccat aatcatgtcc tccaatcgtt tcaaataaat aaggtcgttg tttctgtcaa
     3361 gaaacaacga cagtttataa actgtcggaa aacaaaatgc cgtctgaagg ccggataatg
     3421 cttcagacgg catcggattg ccggttttaa ccctgccctc cgccgttgtt caaatagtgt
     3481 tcccagtgag aatataaccg ggcaatattt tcttcatagg tgtgggcaga aggaatataa
     3541 ccgtctttgg gcggcatata cctgacaaat gattctattt cttccggata atcaaaatct
     3601 gcataaattt tttcaacttc ccccaaagga tcctcaaatt cttcttttct atggaataca
     3661 tcgcttaaga ggacgtacag ccaattttta ggggaataat ccctcatttc cgaagccaaa
     3721 tcttccagaa caggctttaa ttcaagaata ttggatttgt tgattaaaga tagtttgaac
     3781 acacgttcat catgatctga aagcgtcatt tttcgggcat aagctgccac atcagcccaa
     3841 cccaagtatt tattcccata cccccacaga atatccttcc aagaaagacg gactttttgc
     3901 gcggttaaat caaggttcat tttttactcc gattgcctgc cccgtcattc cgccccttcc
     3961 gattgacgcc tgttacgaaa agtcttccaa atgacggctg attgcctctt caacagtcgg
     4021 atgccaatcc ataaatgaag cctgcaattc ctctaaaacc aactcattga ataaatcatc
     4081 caaattccgc caatccgttt tttcatccgg atagatgaaa tttgccataa cgacagtatg
     4141 tttgttttgg gaataatccg ataaggcgca aatcatcaga taccgccccg aatgctccag
     4201 ataaaaaatt cgtttttcca aaggaaaccg gttattccgt tgcccgtttt ccatttttca
     4261 tcctttttaa cgtatcggct tccgcgtcct tcaaattgag ttacctgcct tccgccaagc
     4321 aaacgcccgc gcccctttca tcatttgaat atccgtttga ccatatttac cagataacta
     4381 tcttctttat ataaatcaat cagcaaaggc acgatacccg gctcataaaa taattctgtc
     4441 gtatcagatg tttcttttaa cgcggaaatt atctccaaca gttcataccc gtatcgggga
     4501 taagcaaaca aataggggac tgcttcccgc aaacatgaaa atgcttcgta actttgcatt
     4561 tcccatatat gttcatcttt aaaatcactc aaataccatt catccaattc actttccgga
     4621 tcggatatca atcggataaa ttcatttagt tcgtccttaa acatatcaaa tccttaaata
     4681 taaaatcttt tgattatccg ccgtatcctt attttccaca tcatgaattt caacgccgtt
     4741 catattttgc gttttcccaa gccgtccgcc acagtataaa attatttttt gtatcaattg
     4801 cttatatatt taacaactta ccgccggact tgctttggct gcgtatcaag attgtccggt
     4861 tcgcggcggg cgtttgcttt gtttcaaaca gggcggcgcg taagggattt tcaaggggcg
     4921 tcaggcggaa aaaggaaatg aaaatgccgt ctgaacggca aaacgtgcgt tcagacggca
     4981 ttttgggcgg atcgcgtcat cgcgccaaag ccttcaaaca ttctttgacc aatgccggac
     5041 ctttgtatat caatccgctg tacacctgga cggcagttgc gcccaagcgg attttctctg
     5101 ccgcgtccct gccttccata atgccgccta cgccgataat cggcagcttg ccgtcgatgt
     5161 ggtctgccaa cagcttcaac acccgattac ttttttcatg aacgggcagc ccgctcaaac
     5221 cgccctgctc gcctgcgagc ggatggctgc cgagacttga tttgtcgatg gtggtattgg
     5281 tagcgatgat gccgtccatt tcgacggatt tgacaacgtg ggcgatgtct tcgatttgtg
     5341 cttcatccaa atcgggggcg attttgacgg cgagcgggac gtatttcccg tgtacagagg
     5401 caagctgtgc ctgtttgttt ttcaaagcct caagcaatgc gctcaactcg tcgccacctt
     5461 gcagcgcgcg gaggttttta gtgttgggcg aggaaatatt gacggtaatg taacttgcgt
     5521 gtgcgtaggc tttttcgagg cagattaaat aatcatcggc agcgttttca atcggtgtta
     5581 cagcgttttt gccgatgttg atgcccaata cgccgctgaa tttacttttt tcgatgtttt
     5641 gaatcatggc atcgatgccg tggttgttga agcccatgcg gttgatgatg ccttgatatt
     5701 cgggaacgcg gaagaggcgc ggctgcgggt tgccgggctg cgggttgggc gttaccgtgc
     5761 cgatttcgat gaaaccgaag ccgagcgcgc ccaatgcgtc tatatattcg ccgtttttat
     5821 cgagtccggc ggcaagcccg acagggttgg gcaaatccaa acccatcagt tttacaggtt
     5881 tggtacggtt gccggttacg ggaatcagac ccaatttata aaccatgttg agcgcgtcga
     5941 gcgtgaagtg gtgggctttc tcggcatcga gtgcaaacag gatgcggcgg gcaagtggat
     6001 acatgacagg gctttctgct tcagatggaa atgccgccat tttaaccgaa atcccgtcaa
     6061 acatacggca cacaggtcaa acttgaacga caaaacccgc cgcacccaaa aatgtacaaa
     6121 tcggcaaata ttgatataat agtcattaga tagaaaactc tattaaaagt cggtacaata
     6181 ccaccgattt atttccctta aacaacctgc cgcaaggcat aaaggaacga ctgatatgtc
     6241 aaacatcgaa caacaagtta aaaaaattgt tgctgaacaa ctgggcgtaa acgaagccga
     6301 cgtgaaaaac gaatcttctt tccaagacga cttgggcgcg gattctttgg acaccgtgga
     6361 gctggttatg gctttggaag aagcattcgg ctgcgaaatc cccgacgaag atgccgaaaa
     6421 aatcaccacc gtccaactgg ctatcgacta catcaatgcc cacaacggct aaccggtcgt
     6481 cgcccgacac aacagcctct gctgcaccgc gcaatagagg cttttccctt atatggcaaa
     6541 ctgtttgaac ccctgccgca aattacagac ggcatctgca cgacagccgc atatgccccc
     6601 attccgacaa ccaacagcga ggttatcatg agtcagagaa gagtagtcat tacaggctta
     6661 ggtcaggttt cccctgtcgg caacactgtc gcagaggctt gggacaccct gctcgccggc
     6721 aaaagcggca tcggcgcgat tacccgcttt gacgcatccg acatcaacag ccgtgtcgcc
     6781 ggcgaagtgc gcggtttcga catcggacaa tacatcagcg cgaaagaagc gcgccggatg
     6841 gacgtattca tccactacgg cattgccgcc gcattgcagg caatcgccga ttcgggcttg
     6901 gacgatgtgg aaaacctcga caaagaccgc atcggcgtga acatcggttc cggcatcggc
     6961 ggactgccca gcatcgaggt caccggcaaa gccgtaatcg aaggcggcgc gcgcaaaatc
     7021 aaccctttct ttatccccgg ttcgctgatc aacctgattt ccggacacgt taccatcctc
     7081 aaaggctacc gcggcccgag ctacgggatg gtttccgcct gtaccaccgg cgcgcacgcc
     7141 atcggcaatt ccgcccgact gatcaaatac ggcgacgcgg acataatggt tgccggcggc
     7201 gcggaaggcg caatcagcac tttgggcgtg ggcggttttg ccgcgatgaa agccctctcc
     7261 acccgcaacg acgaccccgc caccgcttcc cgtccgtggg acaaaggccg cgacggcttc
     7321 gttatcggcg aaggcgcggg catattggtg ttggaagaat tggaacacgc caaaaaacgc
     7381 ggcgcgaaaa tctacgccga aatcgtcggc ttcggcatga gttccgatgc ttaccatatc
     7441 accgcgccga acgaagaagg ccccgccctt gccgttaccc gcgcgctgaa agatgccggc
     7501 atcaatcccg aagacgtgga ttacgtcaac gcgcacggca cgtccacccc cttgggcgat
     7561 gccaacgaaa ccaaagccct caaacgcgcg ttcggcgaac acgcctacaa aaccgtcgtc
     7621 agctcgacca aatccatgac cggccacctg ctcggcgcgg cgggcggcgt ggaggccgtg
     7681 tacagcattt tggcgataca cgacggcaaa atcccgccga ccatcaacat ttttgaacaa
     7741 gacgttgaag ccggctgcga tttggactac tgcgccaacg aagcgcgcga cgcggaaatc
     7801 gacgttgcca tttccaactc cttcggcttc ggcggcacca acggcacgct ggtcttcaaa
     7861 cgcttcaaag gctgattccg caaagccgcc gccgacatcg aaatgccgtc tgaaaccgtt
     7921 tcagacggca tttttatag
//
LOCUS       DAWGBY010000087         7910 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.087, whole genome shotgun sequence.
ACCESSION   DAWGBY010000087 DAWGBY010000000
VERSION     DAWGBY010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7910
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.087"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(174..590)
                     /gene="dksA"
                     /locus_tag="WHG62_001545"
     CDS             complement(174..590)
                     /gene="dksA"
                     /locus_tag="WHG62_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ1725632.1"
                     /translation="MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(737..1528)
                     /locus_tag="WHG62_001546"
     CDS             complement(737..1528)
                     /locus_tag="WHG62_001546"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ1725633.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL
                     GVETSATLPELHSDDVLILAVKPQDMEAACKNICTNGALVLSVAAGLSVGTLSRYLGG
                     SRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1577..1984)
                     /locus_tag="WHG62_001547"
     CDS             complement(1577..1984)
                     /locus_tag="WHG62_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ1725634.1"
                     /translation="MEIRVIKYTATAALFAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQGGFDCLEKQGLRRNGLSERVRW"
     gene            complement(1984..2670)
                     /locus_tag="WHG62_001548"
     CDS             complement(1984..2670)
                     /locus_tag="WHG62_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ1725635.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGREPHSVSLIAVSKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSRQRRSLMPPLQVCVEVNIAGEAAKHGVAPEEAVALAVEVAKLPNLVVRG
                     LMCVAKANSSETELKTQFQTMQKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2790..3833
                     /locus_tag="WHG62_001549"
     CDS             2790..3833
                     /locus_tag="WHG62_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ1725636.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEA
                     ARRRAQNSESMSS"
     gene            3997..5223
                     /locus_tag="WHG62_001550"
     CDS             3997..5223
                     /locus_tag="WHG62_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ1725637.1"
                     /translation="MNTDNLHDILDETVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYYSQGSAGLVLRRINHVIPQMRELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPGHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKKDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5340..7490
                     /gene="yccS"
                     /locus_tag="WHG62_001551"
     CDS             5340..7490
                     /gene="yccS"
                     /locus_tag="WHG62_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ1725638.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYEALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLSRLLDNLGS
                     VDQQFRQLRHSDSPAENDRMGDTRIAALETGSFKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVYQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIAGTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSSGTYLQKIAERLKTGETGDDIE
                     YRITRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPDMGPDDFQTALDTLRGELGTLRTRSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT         1912 a         2622 c         1741 g         1635 t
ORIGIN      
        1 agcgggattt ttttggggaa attcgtcatg tcgctgtcgg ataaggtttt tttattttcg
       61 ccaaacgctg caccacctcc aacaatccct tcctccccct cctctgactg gtgcgccttt
      121 gtgaatatac tgtctgaaac ttagggcttc agacggcatt ttgtttgccg ccatcagtcg
      181 gcaaactgtt ttttcatcct ctctcggcgt tcttgggact caacagataa agtggctgtc
      241 gggcgtgcca gcagccgctt cagaccgata ggctctcccg tatcggcaca gaatccataa
      301 tccccttcat caatattgcg gatggtcgcc tgtattttac tgagaagttt tcgttcccga
      361 tcgcgggtac ggagttccaa tgcgtactct tcttcctgtg tggcacggtc ggcaggatcg
      421 ggggctgatt cgtgttcttg gagatgccct gtcgtagcgg aagcattttc gatgagttcg
      481 tcttgcattt ttaccagcaa ttcgcggaaa aaagccaaat ggtcgtcatt catataatcg
      541 tcttccggcc cgctccaatt caaaatatct tgttctgtca gctttgccat aatgtatatc
      601 ctctcggttc accgaaaaaa acaaagcacc acaaagtggc tttattcctt tgatttttat
      661 aaggcttatt gcctaaggcg tttttgaaaa cgcgcatcat aacacgtttt ggattggttt
      721 ttttattttc tttacattat tgatattgcc gttccatttc ctgcgaacgg cgcacacagg
      781 cacaaacgcc ctcacttatg gcttcggcga cacgatgccg cctgaaggct tccacggctt
      841 cgtgggttgt cccgcctttt gacgttacat ttttttgaag cttctcgaaa tcttcacccg
      901 tctgctcggc aagggcaacc gctcctttaa acgttgccag actgagcgcg cgtgcttctg
      961 ccatatcaaa cccttgtcgg atggcggcat tttgcaatgc gtccagcaga taaaacacat
     1021 aagccggtcc gctgccgctg ataccggtaa tgctgtgcat ttgcgcttca tcttccaacc
     1081 aaacggtcaa accgactgat ttcatgattc gatcggcaat cctgcggtct gtttccgata
     1141 cttccgcttc ggcatacata ccggatacgc ccagtcctat tttcccgggc gtattcggca
     1201 taacccggac aatgcggcgg cttcccccga ggtaacggct gagcgtaccg actgacaatc
     1261 cggctgcgac agaaagcacc aatgcgccgt tggtgcagat atttttgcac gcggcttcca
     1321 tatcctgcgg tttgacggca aggattaaaa catcgtcgga atgaagctcc ggcagggttg
     1381 ccgaagtttc gacccccaac tctttttcca aacgttcgcg tttttccgca ccccgattgg
     1441 ctatatagat gcggtaaccg ccttgtttga ccaatccgcc cgcaacggca gccgccatat
     1501 tgccgccgcc gagaaaataa acattcatta tttctaccct attcaaaatt acctgactaa
     1561 attcattccc aattttttac catcggacgc gctcggacag accgttgcgc cgcaacccct
     1621 gcttttccaa gcagtcaaat cctccctgtt tgaacgtctc aatcaaaggt ttgccgtcac
     1681 gcgtacgcca atccagcccg caggcttcaa acttccctat tttcctgtaa aagtaagatt
     1741 gttgtgcgga ttcatattcg tttgccctga cggaacgatt gccgtctgaa agcggtatct
     1801 cgtagtcctc taaagacggc ggactctcgc cgccaatatc ccaaaaatcg atggcggcag
     1861 gttttctcgg cttacaccag ccggacaagg acgaacactc ataccacccc gccagccggc
     1921 agcctgcaac cgtaaatgca aacaacgcag ccgttgccgt atattttatt acccgaattt
     1981 ccatcagccc cttttcccga aaatcgcgct gccgatacgg acgtgtgtcg caccgcactc
     2041 aatggcggca ggcatatcgt ccgacatccc catagacagc acgtccgcct taacgccagc
     2101 cgcattgagg tcggcaagca gcttttgcat ggtctgaaac tgagttttca actccgtttc
     2161 actgctgttg gctttggcaa cgcacatcag tccgcgcacg acaaggttgg gcagcttcgc
     2221 cacttccacg gcaagcgcga ccgcttcttc gggcgcgaca ccgtgttttg ccgcctcgcc
     2281 cgcaatgttt acctcgacac acacctgcaa gggcggcatt aaggagcgac gctgcctgct
     2341 cagccggacg gcggtcttca gacggcatac ggtatgcacc caatgcgcgc gttcggcgac
     2401 aaatttggtt ttgttggact gcacatctcc gatgacgtgc cacacgatgt cggtcaaatc
     2461 cgccaattcc tccgttttgc cgtaccactc ctgaatatag ttctcgccga aatcacgctg
     2521 tccggcagcg taaacttcgc ggatgccgtc tgaagggaag gtcttgctga cggcaatcag
     2581 gctgacggaa tgcggctccc tgcccgcctg cagaaccaat tttccgatac ggtcggacac
     2641 ctcacgataa cgttcttgca acaccgtcat agatcatccc ctaattaaaa atgattaaac
     2701 agttgaaacc cctccagtca gggcggtata atcaaggttg ttagaatcat tccaaccaat
     2761 cgaaacatta tactaaacag agccgcatta tgcagattac cgacttactc gccttcggcg
     2821 ctaaaaacaa agcatccgac cttcacctga gttcgggcat atcccctatg attcgggttc
     2881 acggcgacat gcggcgcatc aaccttcccg aaatgagcgc ggaagaggtc ggcaatatgg
     2941 taacttcggt gatgaacgac caccagcgga aaatctacca gcaaaacttg gaagtcgact
     3001 tctcgttcga actgcccaac gtcgcccgat tccgcgtcaa cgccttcaac accggccgcg
     3061 gccccgccgc cgtattccgc accattccca gcaccgtctt atcgctggaa gaattgaaag
     3121 ccccgagcat tttccaaaaa atcgcagaat cgccgcgcgg catggtattg gttaccggcc
     3181 ctaccggttc gggcaaatcg accacgcttg ccgcgatgat caactacatc aacgaaaccc
     3241 agccggcaca catcctgacc atcgaagacc cgatcgaatt cgtccaccaa agcaaaaaat
     3301 ccctgattaa ccaacgcgag ctgcaccagc acaccctcag cttcgccaac gcgctgagtt
     3361 ccgcattgcg cgaagaccca gacgttatcc ttgtcggcga gatgcgcgac cccgaaacca
     3421 tcggcttggc actgaccgcc gccgaaaccg gacacttggt tttcggcacg ctgcacacga
     3481 ccggcgcggc aaaaaccgtc gaccgtatcg tggacgtatt ccccgccgga gagaaagaaa
     3541 tggtgcgttc catgctgtcc gaatcgctga ccgccgtcat ctcccaaaac ctgctgaaaa
     3601 cgcacgacgg caacggccgt gtcgcctcgc acgaaatcct gattgccaac cccgccgtcc
     3661 gcaacctcat ccgcgaaaac aaaatcacgc agattaactc cgtcctgcaa accgggcagg
     3721 cgagcggtat gcagacgatg gaccaatcgc tgcaatcgct ggtgcgccaa gggctgatcg
     3781 caccggaagc cgcacgcaga cgcgcgcaaa acagcgaaag tatgagttcc tgacacacaa
     3841 ccgccttccg gccataccgg cgggaaaaca aggcgcaaac acgccgggcg ggacgcggca
     3901 tcccgcccgg catacccttc cgaacaggaa gcgtccgcct tcctgttgaa acctgccgcc
     3961 gcaaactgca aggcttaaac cgaaaagaag ctaacgatga ataccgataa cctgcacgac
     4021 atcttggacg aaacggttca agtgtattct caaaaaaaac aaagccgatc cgaaaccccg
     4081 gccgaaatcg gcgcacactt ccacccgctg ctcgaccgcc tgtgcgaaac cgcagaagca
     4141 caaaacgcgt ccgacatcct tatcagcaaa ggattcccgc cctcgttgaa aatcaacagc
     4201 gcattaaccc cgcagccgca aaaggctctg acgggcgagg aaaccgccgc catcgccgca
     4261 tcgacgatga acgccgaaca atcggaaata ttccggcgcg acggcgaaat caactactcc
     4321 gtccaatcgc gcagcggcac gcgctaccgc gccaacgcct actacagcca aggcagcgca
     4381 ggtttggttt tgcggcgcat caaccacgtc atcccgcaaa tgcgggaatt gggcttgccc
     4441 gaaaaactca aagacctcgc cgtcgcaccg cgcgggctgc tgattatcgt cgggcctacc
     4501 ggttcgggca aatccaccac gatggcgact atgctcgaac accgcaacaa aaccctgccc
     4561 ggccatatcg ttaccatcga agacccgatt gagtttatct acaaaccgcg ccgctgcatc
     4621 tttacccagc gcgaaatcgg cgtcgacacc ataaactggc agacggcggt acaaaacgct
     4681 atgcgccaat ccccagacgt ggtctgtatc ggcgaagtcc gcagcaggga aagtatggaa
     4741 tacgcgatgc agctcgccca aaccggccac ctgtgcattt ttacgctcca cgccaacacc
     4801 gcgccgcagt cgctcgaacg catactcaac ttctacccca aagaacagca caaccaaata
     4861 ctgattgaca tcgccctcaa tctgaccggc atcatctgcc aacgcctcgc cctcaaaaaa
     4921 gacaaaacgg gcaggacggc ggttgtcgac ttgctcatca acacgcccgc catccaagac
     4981 ttcatcctga agggcgacct gatgaacatc agtaaaatca tggaaaccgc caaaaccgac
     5041 ggaatgcaga cgatggacca aaaccttttc gaactgtacc gtcacggcat catcagttac
     5101 gaagaagccc tgcgccagtc cgtttccgcc aacaacctgc gattgcacat ccaactgcac
     5161 aaagaaggca aaacgcccga actcctttac gacagggtca acggtctcaa cctcatttcc
     5221 tgatccgcaa aacccaatgc cgtctgaaaa ccgcatcccc gttttcagac ggcatgattt
     5281 tatccgcccc attcatgtgc cacactttat tcacttcata acaataaacc ggtaaaacca
     5341 tgaaaacccc actcctcaag cctctgctca ttacctcgct tcccgttttc gccagtgtct
     5401 ttaccgccgc ctccatcgtc tggcagctag gcgaacccaa gctcgccatg cccttcgtac
     5461 tcggcatcat cgccggcggc ctggtcgatt tggacaaccg cctgaccgga cggctgaaaa
     5521 acatcatcgc caccgtcgcc ctgtttaccc tctcctcgct cacggcgcaa agcaccctcg
     5581 gcacagggct gcccttcatc ctcgccatga ccctgatgac cttcggcttt accattttag
     5641 gcgcggtcgg gctgaaatac cgcaccttcg ccttcggcgc actcgccgtc gccacctaca
     5701 ccacgcttac ctacaccccc gaaacctact ggctgaccaa ccccttcatg attttatgcg
     5761 gcaccgtact gtacagcacc gccatcatcc tgttccaaat catcctgccc caccgccccg
     5821 tccaagaaag cgtcgccaac gcctacgaag cactcggcgg ctacctcgaa gccaaagccg
     5881 acttcttcga ccccgatgag gcagcctgga taggcaaccg ccacatcgac ctcgccatga
     5941 gcaacaccgg cgtcatcacc gccttcaacc aatgccgttc cgccctgttt taccgtttgc
     6001 gcggcaaaca ccgccacccg cgcaccgcca aaatgctgcg ctactacttc gccgcccaag
     6061 acatccacga acgcatcagc tccgcccacg tcgactacca agagatgtcc gaaaaattca
     6121 aaaacaccga catcatcttc cgcatccacc gcctgctcga aatgcaggga caagcctgcc
     6181 gcaacaccgc acaagccctg cgcgcaagca aagactacgt ttacagcaaa cgcctcggac
     6241 gcgccatcga aggctgccgc caatcgctgc gcctcctttc agacggcaac gacagtcccg
     6301 acatccgcca cctgagccgc cttctcgaca acctcggcag cgtcgaccag cagttccgcc
     6361 aactccgaca cagcgactcc cccgccgaaa acgaccgcat gggcgacacc cgcatcgccg
     6421 ccctcgaaac cggcagcttc aaaaacacct ggcaggcaat ccgtccgcag ctgaacctcg
     6481 aatcaggcgt attccgccat gccgtccgcc tgtccctcgt cgttgccgcc gcctgcacca
     6541 tcgtcgaagc cctcaacctc aacctcggct actggatact gctgaccgcc cttttcgtct
     6601 gccaacccaa ctacaccgcc accaaaagcc gcgtgtacca acgcatcgcc ggcaccgtac
     6661 tcggcgtaat cgtcggctcg ctcgtcccct acttcacccc ctccgtcgaa accaaactct
     6721 ggatcgtcat cgccggtacc accctctttt tcatgacccg cacctacaaa tacagttttt
     6781 ccaccttctt catcaccatt caggcactga ccagcctctc cctcgcaggt ttggacgtat
     6841 acgccgccat gcccgtgcgc atcatcgaca ccattatcgg cgcatccctt gcctgggcgg
     6901 cggtcagcta cctgtggcca gactggaaat acctcacgct cgaacgcacc gccgcccttg
     6961 ccgtatgcag cagcggcaca tacctccaaa aaattgccga acgcctcaaa accggcgaaa
     7021 ccggcgacga catagaatac cgcatcaccc gccgccgcgc ccacgaacac accgccgccc
     7081 tcagcagcac cctttccgac atgagcagcg aacccgcaaa attcgccgac agtctgcaac
     7141 ccggctttac cctgctcaaa accggctacg ccctgaccgg ctacatctcc gccctcggcg
     7201 cataccgcag cgaaatgcac gaagaatgca gccccgactt taccgcacag ttccaccttg
     7261 ccgccgaaca caccgcccac atcttccaac acctgcccga catgggaccc gacgactttc
     7321 agacggcatt ggatacactg cgcggcgaac tcggcaccct ccgcacccgc agcagcggaa
     7381 cacaaagcca catcctcctc caacagctcc aactcatcgc ccggcagctc gaaccctact
     7441 accgcgccta ccgacaaatt ccgcacaggc agccccaaaa cgcagcctga aaaaatttcg
     7501 gcattttgta aaggggggcg gattgtcagg caggttgcaa gatagtggat aaggctttgc
     7561 gcagggtaaa tgcgtagcaa ctgaaccgtc attccctcaa aaacagaaaa ccaaaaacag
     7621 aaacctaaaa tcccgtcatt cccacgaaag tgggaatccg gttttttgag tttcagtcat
     7681 tcccgataaa ttgccttagc attgaatgtc tagattcccg cctgcgcggg aatgacggcg
     7741 gagcggtttc tgttttttcc ggtaaattcc taaaactcaa aatttcatca ttcctacaaa
     7801 aacagaaaac caaaatcaga aacctaaaat tcgtcattcc cacgaaagtg ggaatccagt
     7861 tcgttcggtt tcgcttgttt taagtttcgg gtaacttcca cttcgtcatt
//
LOCUS       DAWGBY010000088         7832 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.088, whole genome shotgun sequence.
ACCESSION   DAWGBY010000088 DAWGBY010000000
VERSION     DAWGBY010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7832
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.088"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..534
                     /gene="pglH"
                     /locus_tag="WHG62_001552"
     CDS             <1..534
                     /gene="pglH"
                     /locus_tag="WHG62_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminyl-a1,3-N,
                     N'-diacetylbacillosaminyl-a1-diphospho-di-trans,
                     octa-cis-undecaprenol synthase PglH"
                     /protein_id="HEZ1725639.1"
                     /translation="RSKTTRLFYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGG
                     PDLEKLKQYENRAIKFYGYLPYSEMMSIAKGCDIAVNAIHSHAMQSVTNKLSDYMALQ
                     KPILNSQTNAEVLSLLNLLPHENYRSGDVDSFVQAAKDILKRKNDPVQSDEIVRRFRR
                     DISYRKIVNLIERLANE"
     gene            527..1144
                     /locus_tag="WHG62_001553"
     CDS             527..1144
                     /locus_tag="WHG62_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_101244932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEZ1725640.1"
                     /translation="MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQ
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRAASLDELPELWNVLK
                     GEMSLVGPRPLLMGYLPLYNEFQNRRHEMKPGVTGWAQVNGRNAISWDEKFAHDVWYI
                     DNFSFWLDIKILFLTVKKVFVKEGISAEGEATMPYFTGNKTDEKK"
     gene            1131..2105
                     /locus_tag="WHG62_001554"
     CDS             1131..2105
                     /locus_tag="WHG62_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEZ1725641.1"
                     /translation="MKKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDLNPRMS
                     SACHVSDGSFEVPPISTDSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAAS
                     VHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAK
                     RIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAIPRKRLEVRS
                     GEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFP
                     LTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND"
     gene            2092..2778
                     /locus_tag="WHG62_001555"
     CDS             2092..2778
                     /locus_tag="WHG62_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ1725642.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDSKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSFQ
                     DLVPIIDSNT"
     gene            2826..3020
                     /locus_tag="WHG62_001556"
     CDS             2826..3020
                     /locus_tag="WHG62_001556"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725643.1"
                     /translation="MTKYYSWGVNGFPPYVFDTIWKRWKLNGRGGGYRVRHPGRHDRR
                     GQSGKAAAAQKPQDRDGISD"
     gene            3014..3130
                     /locus_tag="WHG62_001557"
                     /pseudo
     CDS             3014..3130
                     /locus_tag="WHG62_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            3249..4424
                     /locus_tag="WHG62_001558"
     CDS             3249..4424
                     /locus_tag="WHG62_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ1725644.1"
                     /translation="MLNTSLSPWPCFTQEEADAVSKVLLSNKVNYWTGSECRKFEKEF
                     AAFAGTRYAVALSNGTLALDVALKAIGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAVIVVHLAGMPAEMDGIMALAKEHNLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVNELNARKVPCYQGSCSEV
                     YLEKSFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKEHIEAVLTEATR"
     gene            4472..6382
                     /gene="pglD"
                     /locus_tag="WHG62_001559"
     CDS             4472..6382
                     /gene="pglD"
                     /locus_tag="WHG62_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ1725645.1"
                     /translation="MTLETLLALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPTNWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGQAGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMNAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATTSGVRTFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPDITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTANETMLPWHELSALLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDL
                     LWVRETHRKNAV"
     gene            6438..7730
                     /locus_tag="WHG62_001560"
     CDS             6438..7730
                     /locus_tag="WHG62_001560"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ1725646.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     AEVNAVFADVFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFNLSDGTSAEKAILLPLAPEYIGYADVHVEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDSEMARLD
                     ALAQEHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADNVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTR
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
BASE COUNT         1982 a         2381 c         1849 g         1620 t
ORIGIN      
        1 cgctccaaaa ccacccgcct tttctacttg ggaacgctca gttacagcta cgacgtggaa
       61 accgtgtgca aaggtgttcg gaaactttta gacgacggcg aaaacgtcga attgcacatt
      121 atgggcggag gacccgattt ggagaaactc aaacaatatg aaaatcgcgc catcaagttt
      181 tacggttatt taccctattc tgaaatgatg tcgattgcca aaggctgcga cattgccgtc
      241 aacgccatcc atagccacgc catgcagtcg gttaccaaca aactctccga ctatatggct
      301 ttgcaaaaac cgattctgaa cagccagacc aatgccgaag tccttagcct cttgaacctg
      361 ctgccgcacg aaaactaccg ttccggcgac gtggacagct tcgttcaagc cgccaaagat
      421 attttgaaac gcaaaaacga ccccgttcag tccgacgaaa tcgtccgccg cttcaggcgc
      481 gacatttcct atcggaaaat cgtcaacctg attgaaagat tggcaaatga gtaaagccgt
      541 caaacgcctg ttcgacatca tcgcatccgc atcggggctg attgtcctct cacccgtttt
      601 cctgattttg gcgtacctca tccgcaagaa tctgggttcg cccgtcttct tcattcaaga
      661 acgccccgga aaggacggaa aaccttttaa aatggtcaaa ttccgttcca tgcgcgacgc
      721 gcttgattca gacggcattc cgctgcccga cagcgagcgg ctcacgccct tcggcaaaaa
      781 actgcgcgcc gccagtttgg acgaactgcc tgaattatgg aatgtcttaa aaggcgagat
      841 gagcctggtc ggccctcgtc cgcttttgat gggctacctg ccgctttaca acgaatttca
      901 aaaccgccgc cacgaaatga aaccgggcgt gaccggttgg gcgcaagtca atggccgcaa
      961 cgccatttca tgggatgaaa aattcgccca cgatgtttgg tacatcgaca acttcagctt
     1021 ttggctggat atcaaaattt tgttcctgac ggttaaaaaa gtcttcgtca aagaaggcat
     1081 ctcagccgaa ggagaagcca ccatgcctta tttcacgggt aataaaactg atgaaaaaaa
     1141 ataatatact gattctgtcg gcaggtcgcc gtgtcgaatt ggtgcaggac ttccaaaccg
     1201 aagccgcacg tttttcagac ggcatcagcg tttttgccac tgacctcaac ccccgcatgt
     1261 cttctgcctg ccatgtttcg gacggttcat ttgaagtgcc gccgattagt accgattcat
     1321 atatcgacag cattttcaat ctggcggtac gcgaaaatat cggtttaatc atcccaacca
     1381 tagacaccga actgcaaaag ctggcagacg agcgcgaacg ctttgaagcg gcaagtgtcc
     1441 acatcgtcgt ttccgattcg gacttcatcg cacaatgccg cgacaaacgg aaaaccgcca
     1501 ccttgtttgc ccgctacggc atacgctcac ccgaaattta cgaccgcaag aagttggttt
     1561 tcccttgctt cgccaagcct tatgacggca gccgcgccat cggtgcaaaa cggattgaca
     1621 cacctgccga cctgacaccg gaagtcttgg cagacaccaa attaatgttc tgtcagttta
     1681 tcgacatcga aaataaattt tccgagttta ccgtcgatat gtattacgac cgtcaatgcc
     1741 gtctgaaatg cgccatcccg cgaaaacgct tggaagtgcg ctccggcgaa atcagcaaag
     1801 gcgttacctg caaaaacagc ctctaccaaa cgctgctgga aaaaatgtcg gtattgcagg
     1861 gcgcgcgcgg ctgtatcacg gcgcagttct tctacaacga agaaaccggc gaattctacg
     1921 gcgtggaaat caacccccgc ttcggcggtg gcttcccgct gacgtatgcc gcaggcggca
     1981 attatccgag ccggttgatg cgcgaatacc tcggcgacga agaaatcccg ttttcagacg
     2041 actgggaaaa caacctcatt atgttgcgct acgatgccaa ggtcttggtt catgaaaacg
     2101 attaatcctg aaaccaccgt catcgtcttc gacttggacg ataccctgta ttcggaatac
     2161 gaatacaagc tctccggtat ccgttcggtc atcgataccg ttgccgcact gtatcccgat
     2221 tggaattcag acaacctatg gcgcaacatc gaccccgacg gcaaagattg gctggacaaa
     2281 ttgtgccgcc actgtggttt taatgaatcg gaaaaacagg ttcttttgtg gcaataccgg
     2341 ctgcaccgcc cgacgctgac tccgtatgct ccgccggatt tcctgtccga actgaccgcg
     2401 cccttcgccg cacgcgcgct gattaccgac ggcagaagcc tgacccaacg cctgaagctg
     2461 gaagccttgg gtctgtcttc cctgtttgac gacatcctca tctctgaagc ctgctcttcg
     2521 gaaaagcccg acagcaaacg cttccgccat cttcaagaca aatatgccga caaggcaggc
     2581 tgcttcatct atatcggcga caacatttcc aaagacttta tcgcgccgaa cactttgggc
     2641 tggataacca taggattgct tccctccgga cagaacatcc accgccacca gcctgaaagt
     2701 tttaacacag aatatcatcc cgacttttgg gttaactcct ttcaagattt agttcctata
     2761 attgattcaa atacttaacc attacataat caaacatgca ctcacaatat taaaaggact
     2821 atttcatgac aaaatattat tcatggggcg taaacggctt tccgccctac gttttcgaca
     2881 ccatttggaa acgatggaag ttgaatgggc gcgggggcgg ttatcgtgtg cgacatcccg
     2941 gacggcatga ccgtcgcggg caatccggca aagccgctgc cgcgcaaaaa ccccaagacc
     3001 gggacggcat aagcgattaa aatatagtgg attaaattta aatcaggaca aggcgacgaa
     3061 gccgcagaca gtacaaatag tacggcaagg cgaggcaacg ccgtactggt ttaaatttaa
     3121 tccactatac acccccgtac agaccgattt tgacaacacc tgcggcgcgc gcccgattct
     3181 tcggaacacg ccccccttca gacggcatag ggtcggaaat gccgtctgaa cccgacggac
     3241 caaacaccat gctgaacacc tccctctccc cgtggccctg ctttacccaa gaagaagccg
     3301 atgccgtttc caaagtcctg ctgtccaaca aagtcaacta ctggacgggc agcgaatgcc
     3361 gcaaatttga aaaagaattt gccgcctttg ccggcacgcg gtacgccgtc gccctttcca
     3421 acggcacgct ggcactcgat gtcgcgctca aagcaatcgg cataggcgcg ggcgacgatg
     3481 tgattgttac ttcgcgcact ttcttggctt ccgcttcctg cattgtgaac gcgggcgcaa
     3541 atcccgtgtt tgccgacgtg gatttgaaca gccaaaacat cagcgcggaa accgtcaaag
     3601 ctgtgctgac cccgaatacc aaagccgtca tcgtcgtcca cctcgccggt atgcccgccg
     3661 aaatggacgg catcatggct ttggcaaaag aacataatct ttgggtaatc gaagactgcg
     3721 cccaagcgca cggcgcaaaa tacaaaggca aatccgtcgg ctctatcgga cacgtcggcg
     3781 cgtggtcgtt ctgccaagac aaaatcatga ccaccggcgg cgaaggcggt atggttacga
     3841 ccaacgacaa aaccctgtgg gaaaaaatgt ggtcgtacaa agaccacggc aaaagctacg
     3901 atgccgtgta ccaccgcgaa cacgcgcccg gtttccgctg gctgcacgaa agcttcggca
     3961 caaactggcg tatgatggaa atgcaggcgg caatcgggcg cattcagctc aaacgcctgc
     4021 ccgaatggac tgcctgccgt caagcgcacg ccgccaagct ggcggaaagc ctaggcaaat
     4081 tcaaaagtat ccgcttggtt gaagtcgccg actacatcgg acacgcgcaa tataagttct
     4141 acgccttcgt caaacccgaa cacctcaaag acggctggac gcgcgaccgc atcgtcaacg
     4201 aactgaacgc gcgcaaagtc ccctgctatc aaggtagctg ctccgaagtg tatttggaga
     4261 aatccttcga caacacgcct tggcgtccga aagagcggct gaaaaatgct gtcgagttgg
     4321 gcgacaccag cctgatgttc ttagtacatc cgacgctgac cgacggcgaa atcgcgttct
     4381 gcaaagaaca catcgaagcc gtattgaccg aagccacacg ataacccttc agacggcata
     4441 tgccgcctga aagcacatac cgccccacga tatgactctg gaaaccctgc ttgccctacc
     4501 gcgcaacatc aagaaaatct gtttcctcat acacgatttt ctgatgattt tcattgcctt
     4561 ttggtttacc caaagcctga aggccgacta ctcgaacgaa tggttcgacc ctaccaactg
     4621 gcagtctttc ctattgaccg cgccgttgac catcggcctg ttcgtcagaa tggggctcta
     4681 ccgtgccgtt acacgcttca tcagcttccg catcctctcc accgcgctgg caggcagcct
     4741 cgcctccgcc gtattgttct tcctcaacac attgattttt gaagaaaggc tgcgcctcgc
     4801 cctgccgatt gtctatttct tactgctgtt tgtttccgtg accggctcgc gtatggtttt
     4861 gcgcggactg ttgtccgaac accccaaaaa acagatgatc cccgtcatca tttacggcgc
     4921 ggggcaggcg ggcagacagc ttctcgaggc cgtcaaacaa atgcgcgaat attccgccgc
     4981 cgcctttgtg gacgacgacc ccaaactgtg gcacaccgtc atctacgacc ttgccgttta
     5041 ccagcccgat gccatcgcct tcctcatcga acgctacggc gtggaaaaaa tcctgctcgc
     5101 catccccggc gcgactcagg aacaacgccg ccgaatcatc aacaaactgg aagcctatcc
     5161 ctgcgaagtg ttgaccattc ctggaatgaa agacctgatg gacggaaaaa tcagcatcgg
     5221 cacgctcaaa aaaatctctg tgtccgacct gctcgggcgt gattccgtcg caccagacga
     5281 ccgcctcatg aatgccgaca tcgaaggcaa aaccgtcatg gtaaccggcg cgggcggctc
     5341 catcggttcg gaactctgcc gccagattat ccgccgccgc cccgaaaagc tgctgctgtt
     5401 cgagttatcc gaattcgccc tgtacgccgt cgaaaaagaa ttgcgcgaaa cctgcatcca
     5461 aaaacgcctc gataccgaaa tcctgccctt tctcggttcg gtgcaaaacc gcacgctgct
     5521 cgaacacgtc atgaccgcct tttccgttgc gaccgtctat cacgccgccg cctacaaaca
     5581 cgtccccatg gtcgaattca acaccgtcga aggcatacgc aacaacatct tcggcacact
     5641 cgagtgcgcg cttgccgcca cgacatcggg cgtaagaacc ttcgtcctca tctccaccga
     5701 caaagccgtc cgccccacca acaccatggg tgccagcaaa cgcatggcgg aactctgcct
     5761 tcaggcactc gccgccgaac ccggacagaa aacccgcttc agcatggtac gtttcggcaa
     5821 tgttttaggt tcgtccggct ccgttgtccc gctgtttgaa aaacagattg cagaaggcgg
     5881 cccgctcacc ctgacccacc ccgacatcac acgttatttc atgaccatac ccgaagccgc
     5941 ccaactcgtc atacaggcag gcgcgatggg tacgggcggc gacgtattcg tcctcgacat
     6001 gggcgaatcc gtcaaaatca tcgaccttgc ccgccaaatg attaccctaa gcggcctcaa
     6061 acccaaaaca cccgaacaac ccgacggcga catcgaaatc ctcattaccg gactgcgtcc
     6121 cggagaaaaa ctctacgaag agctgctcat cggcgacaac gtccgcaaaa ccggccatcc
     6181 gcgcatcatg accgccaacg agaccatgct gccgtggcac gagctctccg ccctgctcga
     6241 ccgcatccgt gcggcctgcg accgttacga ccagcaggca atccgcaccc tgctcatcaa
     6301 cgccccgacc ggctttgccc cgagcgacgg catctgcgac ctgctttggg tacgagaaac
     6361 acacagaaaa aatgccgtct gaaccttcag acggcataac gtacaaacca acctacctta
     6421 cacacacgga gtttgacatg cagttctcag cattcggcga aaaattcacg caacacagcg
     6481 gcatcctcca actgatggac gacctcggcg acgcgctcaa aagcgacaag cccgtcaata
     6541 tgctcggcgg cggcaatccg gcgcgaatcg ccgaagtcaa tgccgtgttc gccgacgtat
     6601 tttccaaact ggcagcagaa catgccgtcg aaaacatcgg caactactcc aatcctcaag
     6661 gagatgccgc gctgattgac gcgctgaccg ccttcctcaa ccgcgaatac ggctggaacc
     6721 tgaccgccga caatatcgcg ctgaccaacg gttcgcaaaa cgcgtttttc tatttattca
     6781 acctcttcgg cggcaaattc aacctttcag acggcacatc cgcagaaaaa gccattttgt
     6841 tgccgctcgc gcccgaatac atcggctatg ccgacgtgca tgtcgaaggg cagcacttcg
     6901 tttccgtcaa gcccaaaatc gaaaacgtcg aacacgaagg cgaagcaggc ttcttcaaat
     6961 accgcgtgga ctttgacgca ctggaaaacc tgcccgaact caaagcgggc aaaatcggcg
     7021 cgatttgctg ttcgcgcccg accaacccga ccggcaacgt gctgaccgac agcgaaatgg
     7081 cgcggctgga cgctttggcg caagaacacg gcattccgct gattatcgac aacgcctacg
     7141 gaatgccgtt ccccaacatc atttacagcg acgtaacgct gaattggcat gaaaacatca
     7201 tcctctgctt cagcctttcc aaagtcggtc tgccgggcgt gcgcaccggc atcatcgtcg
     7261 ccgcgcccga agtcgtcaaa gccgtcagca gcctgaacgc gattgtgaac cttgccccca
     7321 cgcgcttcgg cgcggccatc gccgccccgc tgctggaaag cggcgagatg aaacggcttg
     7381 ccgacaacgt catccggccg ttttaccgca atcaggcgca aaccgccgtc tcgctgctca
     7441 agcgcgagct gggcgcgtac ccgatgaaaa tccacaaacc cgaaggcgcg attttcctgt
     7501 ggctctggtt tgaaaacctg cccgtttctt cgcaaaccct gtacgaaatg ctcaaagccg
     7561 aaggtacgct gattattccg ggcgaacatt tcttcgtcgg catcgacacg cgggattatc
     7621 cgcacgcggg cgagtgcatc cgtatgagca tcgcgcagga cgctcaaacg ctggaaaaag
     7681 gcattgccgc catcggtaaa accgtccgaa aactgtacga caacgtttaa accgcaaaaa
     7741 atgccgtctg aaaagttttc agacggcatg agacctttgc aataacatag gttactaaaa
     7801 ttttatgctc aatctcattt tcaaaatgca aa
//
LOCUS       DAWGBY010000089         7821 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.089, whole genome shotgun sequence.
ACCESSION   DAWGBY010000089 DAWGBY010000000
VERSION     DAWGBY010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7821
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.089"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(182..619)
                     /locus_tag="WHG62_001561"
     CDS             complement(182..619)
                     /locus_tag="WHG62_001561"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725647.1"
                     /translation="MFLRDLFALRGNNKKSTRNCSSLSVGLSAVWGICSINKRSSENI
                     FRRPFPNKGLATACRFKQSIALTFAFVRSASQTNCIGSGNADCADYTGNIALAHALTH
                     SCGKVDAYAFIVAVADFYGIWADAQGKRGTFLKFLVGNGYIID"
     gene            828..1181
                     /locus_tag="WHG62_001562"
     CDS             828..1181
                     /locus_tag="WHG62_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ1725648.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAIWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            1171..2037
                     /gene="atpB"
                     /locus_tag="WHG62_001563"
     CDS             1171..2037
                     /gene="atpB"
                     /locus_tag="WHG62_001563"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ1725649.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            2094..2330
                     /gene="atpE"
                     /locus_tag="WHG62_001564"
     CDS             2094..2330
                     /gene="atpE"
                     /locus_tag="WHG62_001564"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ1725650.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            2401..2871
                     /locus_tag="WHG62_001565"
     CDS             2401..2871
                     /locus_tag="WHG62_001565"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ1725651.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            2876..3409
                     /locus_tag="WHG62_001566"
     CDS             2876..3409
                     /locus_tag="WHG62_001566"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ1725652.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAIIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            3420..4967
                     /locus_tag="WHG62_001567"
     CDS             3420..4967
                     /locus_tag="WHG62_001567"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ1725653.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            4992..5867
                     /gene="atpG"
                     /locus_tag="WHG62_001568"
     CDS             4992..5867
                     /gene="atpG"
                     /locus_tag="WHG62_001568"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ1725654.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            5905..7302
                     /gene="atpD"
                     /locus_tag="WHG62_001569"
     CDS             5905..7302
                     /gene="atpD"
                     /locus_tag="WHG62_001569"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ1725655.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            7313..7735
                     /locus_tag="WHG62_001570"
     CDS             7313..7735
                     /locus_tag="WHG62_001570"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ1725656.1"
                     /translation="MSIMEVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         1925 a         1764 c         2058 g         2074 t
ORIGIN      
        1 ccgtctgaaa tatagagaat agctttccag attttaagtg ggaaatataa ttctattgac
       61 attttttctg cttcacgtaa gaatcgtttt cctgttttca tttttaattt tcgaggaaat
      121 tatgaacaca cgcatcatcg tttcggctgc gttcgttgcg ttggcattag caggttgcgg
      181 ctcaatcaat aatgtaaccg tttccgacta gaaacttcag gaacgtgccg cgtttgcctt
      241 gggcgtcagc ccaaatgccg taaaaatcag caaccgcaac aatgaaggca tacgcatcaa
      301 ctttaccgca actgtgggta agcgcgtgag ccaatgctat gttaccagtg taatcagcac
      361 aatcggcgtt accacttccg atgcaatttg tttgggaggc ggaacgcaca aaggcaaaag
      421 tcaatgcaat gctttgctta aagcggcagg ccgttgctaa tcctttattc ggaaaaggtc
      481 gtctgaaaat attttcagac gaccttttat ttattgagca aattccccaa actgccgaca
      541 atccgaccga taaactgcta caatttcgcg ttgatttttt attatttcca cgtaaagcaa
      601 acaaatcacg taagaacatt aaaaatgtaa agaaattgcg gacaaactcc ttaatatcct
      661 gtaattatat gtaatgtgtg ttagaatgac acctgtcgcc gttattcagg cggcgagcgc
      721 ggcggattgg gatacgttgt ttcacaaaga ttaactgtcg cttgacgtaa taaggcttct
      781 aaattatatt agccgcgccc caaatccgag gcggaaacat tccctttatg aagcagatta
      841 tcatcctaca atccgccgta ttgtccatat gcgccgcagt tgcctttgct gtatggggtt
      901 ttgccggatt cctttcggcg gtcggtggcg gtttgtccta cctgcttccc acgtttgttg
      961 cagttttact tttaaaactt ttcaggggaa accccttcct gcaaagcagg atgttcgtct
     1021 tcggagagat tttaaaagta gtgctgtcgc tgttgtccat gcttgccgta tttgcaatat
     1081 ggcatcaatc gctggtgttc gccccgtttc tgatggggct gctcggtgtc agccatttgg
     1141 tttttttagt attgttgaga gtgaaagatt atggcaggtg aaaccattac cgctgccgac
     1201 tacatcaagc accacttgca gagcttgacc agtttgtcgg atgttactca gggtcaggga
     1261 ctgaaaaaca ttgctgattt ttcgtttatt aaccttgatg ctgtcttttt tgccgtcctg
     1321 ttgggcgtaa tcggcagctt tctgttgtgg cgcggtgcaa aaaaagcgac ggcaggcgtt
     1381 cccggacgtt tccaggccgc agtggaaatc ttgtttgagt ttgtggacga tatgtgtaag
     1441 agcatcattc acaacgaaaa gtctagaaaa gccgtcgcgc cgttgggtct gacgctgttt
     1501 gtttggattt ttctgatgaa cgcgatggat atgctgccgg tcgatttgct gccgatggta
     1561 tggcagggca ttaccggcaa ccatcacgcc ctgctgcgcg tcgtaccgac tgccgatttg
     1621 aacaccactt tggcactcgc tgtcggcgtg ttgctgattt gtatctatta caacatcaaa
     1681 atcaaaggat tgggcggctg gtttcacgag ttgttcagcg cgccgttcgg tgcaaaactc
     1741 gcacctgcga actttctgtt gaatttggtc gagtttcttt ctaaaaccgt atcccacggt
     1801 atgcggttgt tcggcaatat gtatgcgggc gaattggtat tcttgctgat agccttgctt
     1861 ggcggtgctt gggcggcttc cggcagcgtc gaagtcatgg atccgattct gtttgtattc
     1921 cacattattg ccggtttggc atgggcgatt ttccatattt tggtgattac cctgcaggcg
     1981 tttattttca tggcgttggc gttcgtctat atcggacagg cacatgatgc gcactgattt
     2041 tcctaagtag tttgtttttg tagtttaacc tttgtttctt taaggagttt aaaatgggtt
     2101 tgattgctat cgcatgtggt ttgatcgttg cattgggtgc attgggtgcc tctatcggta
     2161 tcgcaatggt cggttctaaa tatttggagt cttctgcccg tcagcccgaa ctgatcggtc
     2221 cgctgcaaac caaactgttc ctgattgccg gtttgattga tgccgcattc ttgattggtg
     2281 tcgccattgc actgctgttc gccttcgtta acccgtttgc aggtgcataa tcaggacgga
     2341 ttcgtccgtt ccgtacaggc gcagcctgtt tgattaaccc cagtacgaag gttaagtaac
     2401 gtgaatatca atgcaacatt attcgctcaa atcatcgtct ttttcggttt ggtatggttt
     2461 accatgaaat tcgtgtggcc gccgattgca aaagctttgg atgagcgtgc cgcaaaagtc
     2521 gccgaaggct tggctgccgc cgagcgtggt aaaagcgatt tcgagcaggc tgaaaaaaag
     2581 gttgcagaac tcttggcaga agggcgtaat caggtttccg aaatggttgc caacgccgaa
     2641 aaacgtgccg ccaaaattgt cgaagaagcc aaagaacagg cttcttccga ggcggcgcgc
     2701 attgcagctc aggcaaaggc cgatgtggag caggaattgt tccgcgcacg cgaatccctg
     2761 cgcgagcagg ttgccgtgtt ggctgtcaaa ggtgccgaat ctattttgcg cagcgaagtc
     2821 gatgcttcca aacacgcaaa actgctcgat accctgaaac aggagctgta atcttatggc
     2881 agagttcgca acgattgcca gaccttatgc aaaggcattg ttcggtctgg ctcaggaaaa
     2941 aaaccaaatt gagtcttggt tgggcggact ggaaaaactt gcggcggttg ttcaggaagg
     3001 gaaggtggct tcattgattg accgtcctga aacgaatgct tcagaaaaag cagatatcct
     3061 catcgatttg gtcggtttga aagacaagga gttgaaaaac tttgttatcg tcttggccgg
     3121 gcagaaacgt ttgtcgatat tgccggaagt atatgctcaa tatcaagact tgaccttatc
     3181 attcaaccat atcaaatctg ccatcattta cagtgcctat ccgttgaccg acaaacaggt
     3241 cggcgagttg gcgcaaatgc tgaataagcg tttcgacagc gagctgaaaa tctctgtcga
     3301 aatcgaaccg gagctgattg gcggcataaa agttgaagtg ggtgatcagg ttttggattt
     3361 gtctgtacaa ggcaaattga gtgccttgta cacgactatg acgaattagg agagttttca
     3421 tgcagcttaa tcctgctgaa attagcgatt tgattaaagc caagatcgaa aatctgtctg
     3481 taaatgccga agtgcgtact cgtggtacgg tgatttcggt aactgacggt atcgttcgca
     3541 tccatggttt gtcagatgca atgcaaggtg agatgctcga attcccgggt aacactttcg
     3601 gcttggcgat gaacctggag cgcgactccg tcggcgccgt agtgttgggc gagtacgaac
     3661 atattaaaga aggcgacacg gttacctgta ccggtcgtat cttggaagtg ccggtcgggc
     3721 gcgaactggt cggacgcgtc gttgatgcat tgggtcggcc tatcgacggc aaaggcccga
     3781 ttaatacaac tttgaccgcc cctatcgaaa aaatcgcacc gggcgtgatt gcgcgcaaat
     3841 cggttgacca gccgatgcaa accggtctga aggcgattga ctctatggtt cctgtcggtc
     3901 gcggtcagcg tgagttgatt attggcgacc gtcagacagg taaaacggcc gtagcattgg
     3961 atgccatcgt caaccaaaaa ggtacgggtg ttatctgtat ctatgtcgct atcggtcaaa
     4021 aagcatcttc tattgccaac gtggtccgca aattggaaga gcatggcgcg atggagcata
     4081 ccatcgtggt tgctgcaact gcatctgaag cggcggcatt gcaatatatc gcaccttact
     4141 ccggttgtac gatgggtgaa tttttccgcg accgcggcga agatgccttg attgtttatg
     4201 acgatttgtc caaacaggct gtggcttacc gtcaaatttc cctgcttttg cgccgtccgc
     4261 ccggccgcga agcctatccc ggcgatgtgt tctacctgca ctcccgtctg ttggaacgtg
     4321 cagcacgtgt caatgaacac gaagtggaga aattgaccaa cggcgaagta aaaggcaaaa
     4381 ccggttctct gaccgcgttg ccgattatcg aaacccaagc gggcgacgta tctgctttcg
     4441 ttccgactaa cgtcatttcg attaccgacg gtcagatttt cttggaaacc gacctcttca
     4501 acgccggtat ccgtcctgca atcaatgccg gtatttccgt atcccgcgta ggcggtgctg
     4561 cacaaaccaa agtgattaaa aagctgggtg gcggtatccg tttggcgttg gcgcaatatc
     4621 gtgaattggc ggctttctcg caatttgcat ccgatttgga tgaagctacg cgcaaacaat
     4681 tggagcatgg cgaagtcgta accgaactga tgaaacagaa acagttcagt acgttgaata
     4741 cggctgaaat ggctttgacc ctttgggcaa tcaacaacgg ttcgtattct gatgttccgg
     4801 ttgccaaagc tctggctttt gaatctgaat ttttgagctt tgtccgtacc caacatccgg
     4861 aagttttgga agccgtcaat gcttcaggtg caatgtccga cgagagcgag aaaacgcttg
     4921 aagcagccat gaaatccttc aaatcttctt acgcctatca ggcataaggc ttgaagtgaa
     4981 aggagtctga aatggcagta ggaaaagaga ttctcaccaa aatccgcagt gttcagaata
     5041 cccaaaagat cactaaagcg atgcagatgg tgtcaacctc taaaatgcgg aagactcagg
     5101 aacggatgcg tttggcgcgt ccgtatgccg aaaaagtgcg tatggtgatg agccatcttg
     5161 cgcaaaccaa taccgatcat ggtattccgt tactggaatc tcatcgggag attagacgtg
     5221 tcggttttat tttgattacg tctgataagg gtttgtgtgg cggtttgaac gccaacgtgc
     5281 tgaaaaagtt tttggcacaa gttcaagagt atcggaatca aggtattgaa gaggaaatcg
     5341 tatgccttgg cagtaaaggt ctgatggcgt gtcagagcat tggtctgaat gtggttgcca
     5401 gtgccgtaaa tttgggcgat accccaaaaa tggaaatgct gctcggacct ttgacagaac
     5461 tcttccaacg gtatgagaaa catgaaattg acagaatcca tctggtgtat tcgggttttg
     5521 tcaataccat gcgtcaagaa ccgagaatgg aagtattgct gcctatcggt gagaacgtga
     5581 ttggcgattc agctcccaaa tcaccgttca gctgggaata ccgctacgaa ccgactgcac
     5641 ttgcagtgtt ggaatatctg gttcgccgct atttagagtc tgtggtttat caggcgttga
     5701 gcgacaatat ggcatccgaa caggcagccc gcatggttgc catgaaagct gcaacagaca
     5761 atgcaggcaa tgccatcaaa gagttgcgtc tggtatataa caaatcgcgt caagctgcga
     5821 ttaccacgga attgtcagaa attgtagcag gtgcggcggc tgtctgatgc cgtctgaatc
     5881 ctgtacagaa attaggatac gataatgagc caaggcaaaa tcgtacaaat tatcggtgcg
     5941 gttgttgacg tggaatttcc acgcgacatg attccgcgcg tttacgacgc tttgaaatta
     6001 gacgaaaacg gtctgacttt ggaagtccaa cagcttttgg gcgacggcgt agtccgtacc
     6061 attgcgatgg gcagctcgga cggtttgaaa cgcggcatga ctgtgagcaa taccggtgcg
     6121 cccattactg tgccggtagg taaaggtacg ttgggacgca ttgtcgatgt attgggaacg
     6181 cctgttgacg aagcaggtcc gattgatacc gacaagagcc gtgccatcca ccaagccgcc
     6241 cctaagtttg acgaactgtc ttccacaacc gaattgctcg aaacgggcat taaagtgatt
     6301 gacttgctgt gtccgtttgc caaaggcggt aaagtaggtc tgttcggcgg tgccggtgtg
     6361 ggtaaaaccg tgaacatgat ggaattgatc aacaacatcg ccaaagcgca cagcggcttg
     6421 tccgtgttcg caggcgtggg tgagcgtacc cgcgaaggta acgacttcta ccacgagatg
     6481 aaagattcca acgtattgga taaagtggca atggtttacg gtcagatgaa cgaacctccg
     6541 ggcaaccgtt tgcgcgtcgc attgaccggt ttgaccatgg cggaatactt ccgtgacgaa
     6601 aaagacgaaa acggcaaagg ccgcgacgta ttgttcttcg tggacaacat ctaccgttac
     6661 accctggctg gtaccgaagt atccgcattg ttgggccgta tgccttctgc agtgggctac
     6721 caaccgacat tggctgaaga aatgggtcgt ttgcaggagc gtattacctc tacccaaacc
     6781 ggttctatta cttccatcca agccgtatat gtacctgcgg acgacttgac cgacccgtct
     6841 ccggcaacaa cgttcgccca cttggacgca accgtcgtat tgagccgtga tattgcctct
     6901 ttgggtattt acccggcagt tgaccctctt gactctactt cacgccaact ggatccgatg
     6961 gtcttgggtc aagagcacta cgacgtggcg cgcggcgtac agtccaccct gcagaaatac
     7021 aaagaattgc gcgacatcat cgccatcttg ggtatggacg aattgtctga cgaagacaaa
     7081 ctgaccgtaa tgcgtgcgcg taaaatccaa cgcttcctgt cccaaccgtt ccacgttgcc
     7141 gaagtgttta caggttctcc gggcaaatat gtcgccctgc gcgataccat tgccggcttc
     7201 aaagccatct tgaacggcga atacgaccat ctgcccgagc aggcattcta tatggtcggc
     7261 agcatcgaag aagcggttga gaaagcgaaa accttaaact gaggaggtcg gcatgagcat
     7321 catggaagtt gaggtggtaa gtagcgagca gaaaatctat tcaggcgagg caacatttat
     7381 cgttgttccg actgtacagg gcgaactcgg tatttatccg cgacacgagc cgattatgag
     7441 tttggtgcgg ccgggggctt tgcgtttgac cgttccgggc gaggataaag aggttttggt
     7501 tgctgtttcc ggcggtgttt tggaagtaca gcctgataaa gtaactgtct tggcggatgt
     7561 tgccgtccgc agtgcggaga tggatcaggc acgtgcggaa gaggcgaaaa aagccgcaga
     7621 agcgggcatt tcccaagcta aagacgataa ggctttggcg gaggcgcata aagcattggc
     7681 tgctgcgatt gcacagctca aaactttgga ctatatccgt tcgcacaaga aataaacttg
     7741 tttggtttgg aaaagcacga ccgtttggtc gtgcttttta tttttccaag ttttgaaaat
     7801 atagtggatt aacaaaaatc a
//
LOCUS       DAWGBY010000090         7561 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.090, whole genome shotgun sequence.
ACCESSION   DAWGBY010000090 DAWGBY010000000
VERSION     DAWGBY010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7561
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.090"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..294
                     /locus_tag="WHG62_001571"
     CDS             <1..294
                     /locus_tag="WHG62_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ1725657.1"
                     /translation="KKIMPDSIVYTDSLSSCDKLDVSGFIYYRINHSKEFADRQNHIN
                     GIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSQQLKILRDWCGI"
     gene            507..2042
                     /locus_tag="WHG62_001572"
     CDS             507..2042
                     /locus_tag="WHG62_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ1725658.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARTSSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            2039..2131
                     /locus_tag="WHG62_001573"
     CDS             2039..2131
                     /locus_tag="WHG62_001573"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ1725659.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2167..3411)
                     /gene="lysA"
                     /locus_tag="WHG62_001574"
     CDS             complement(2167..3411)
                     /gene="lysA"
                     /locus_tag="WHG62_001574"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ1725660.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVNGGGYKLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3422..3592)
                     /locus_tag="WHG62_001575"
     CDS             complement(3422..3592)
                     /locus_tag="WHG62_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ1725661.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLDLPKEGDKARFGVIQTGLQL
                     QSKPQSAPPTQK"
     gene            3663..3986
                     /gene="cyaY"
                     /locus_tag="WHG62_001576"
     CDS             3663..3986
                     /gene="cyaY"
                     /locus_tag="WHG62_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ1725662.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDILNEALSAASGEAV
                     EIAEL"
     gene            4041..4547
                     /gene="luxS"
                     /locus_tag="WHG62_001577"
     CDS             4041..4547
                     /gene="luxS"
                     /locus_tag="WHG62_001577"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ1725663.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            4693..7488
                     /gene="polA"
                     /locus_tag="WHG62_001578"
     CDS             4693..7488
                     /gene="polA"
                     /locus_tag="WHG62_001578"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ1725664.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSSETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHAELSDGIESLRRTTPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEMPFEKQAEKATAPEKLDYQA
                     VTTEAQFAALLDKLSRADTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPDMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPPGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGTAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLVSDDLKSKLIMQVHDELVLEVVETELDFVKEKLPQIMAKVGGGLLD
                     VPLVAEVGVGENWEEAH"
BASE COUNT         1741 a         2025 c         2058 g         1737 t
ORIGIN      
        1 aagaaaatca tgccggacag tattgtttat accgatagtc tgagcagctg cgacaagttg
       61 gacgtgagcg gtttcattta ttaccgcatc aaccattcca aggaatttgc agaccgtcag
      121 aaccacatta acggcattga gaatttttgg aatcaggcaa aacgtgtctt gcgaaaatac
      181 aatggaatcg atcgcaaatc tttcccactg ttcttgaaag aatgcgaatt tcgatttaac
      241 ttcggcacac cgtctcaaca gcttaaaatc ctgcgggatt ggtgtgggat ttagggctaa
      301 tctagtacag cccctaaaat ttttcgtttt caagccttca ccgcttgcca tcagcgttaa
      361 atttttttac gataagcaca tagattgtaa acaatcggcc acaagccggt ttgttttttc
      421 agaagacatt atccctgtca gacgctattt ctatatattt cgcctataat ggcttgtttt
      481 taataaataa ttcaagaggt atcaacgtgt ctgattccaa gacgaaagaa cgcgccacat
      541 tcggcacgcg ccgcgcgttt atgattgccg ccatcgggtc cgccgtcggc ttgggcaata
      601 tttggcgttt cccctatatt gcttttgaaa acggcggcgg cgcgttcatc ctgccctatc
      661 tggtcgcgct tctgacggcg ggcatcccgc tgctgctgct cgattatgcc atcggccacc
      721 gttaccgtgg ttctgcgccc ttggctttcc gccgcctcgg acgatggttt gagccggtcg
      781 gctggtggaa cgtgatgacc aatatcgtca tctgcatcta ttacgcggta attatcggtt
      841 gggcggcaag ctatacctat tattcggtca acgccgcctg gggtgcggat ccgcagggtt
      901 ttttctttaa ggacttcctg caaatggcgg gcccggaagc cttgggtttg gattttgtcg
      961 gcaaagtcgc cggtcctttg gcgggcgtgt gggtttttac cgccgccatt atggcgttgg
     1021 gcgtgcaaaa gggcgtggcg cgcacctcgt cgttctttat gccgctgctt ttggtgatgt
     1081 ttttgattat ggtcggcatt tcactaaccc tgccgggtgc ggcaaagggc ttggacgcat
     1141 tgtttacgcc cgactggtcg aaactcgccg attccaaggt ctgggtggcg gcatacgggc
     1201 agattttctt ttcgctttcc atctgcttcg gcattatggt tacctattct tcttatttga
     1261 agaaaaaaac cgacttgggc ggaacggggc tggtggtcgg ttttgccaac agcagctttg
     1321 aactgctcgc gggcatcggc gtgtttgccg cattgggctt tatggcgcag gcgggcggta
     1381 aggcggtcaa cgaggttgcc tcaggcggca tcggtttggc gtttatcgcc tttccgacca
     1441 ttatcaacca ggcaccgatg ggctggctga tcggcatatt gtttttcggt tcgctggtat
     1501 tcgccggcgt tacgtcgatg atttccatcc ttgaagtgat tgtggcggcg attcaggaca
     1561 agctgaacat cgggcgcgtc aacgccacgc tgctggtctg cattccgatg ggcattgttt
     1621 ccacgctgct gttcggtacg gcgacggggc tgccggtttt ggacgtgatg gacaaattcg
     1681 tcaacaccta cggcattgtt gccgccggct ttgtttatgt tgccgccatc atcatcagcg
     1741 gcaggctgcc ggaattacgc aagcacctga acgctttgtc ctccatccgc atcggcggct
     1801 tgtggacggt ctgcgtcgtg gttaccgtcg tgatgctcgg ctatatgctg tttaaagata
     1861 ccagcggcct gatggagaaa aattacgaag gttatccgga tggtttcctc agtattttcg
     1921 gctgggggat gtcggcggcg ttggtcgtgt tcgggctgct gctgtcgttg ctgccttgga
     1981 aacacggtca ggatttcaac gtcaaagacg aacacgaaca tgaacaagga gaagaaaaat
     2041 gagtacttcc gccattgtga tgatgattgt ctcaatcgtg ataatctggg gagggctgct
     2101 gctttccctg ttaaggctgc cgaacgagta agcctttaga gcgttaaaaa tgccgtctga
     2161 accgcttcag acggcatttt gatgttcggc ttgcaggcag gcgagttcgt ttgccatttg
     2221 ctgttctaag gtttcgcgtc ggcggatgag tttgtatccg ccaccgttaa ccaacacttc
     2281 cgccgcacgg ttgcgcgcgt tgtaattgct cgccatactg gctccgtatg cgcccgcgct
     2341 gcggataagc agcaaatcgc cttcttcgca ggcgatggtg cggtctttgc cgaggaagtc
     2401 gccggtttca caaatcgggc cgacgatgtt ggcggtcaga ggctcaatgt ctttggtttc
     2461 gaccgcctcg atgtgatgat aggcatcata tagggcgggg cgcattaaat cgttcatcgc
     2521 cgcatcgacc atcacaaagt ttttctcttc gccgtatttg acgaattcga cacgcgtcaa
     2581 caacgcgcct gcgttgccga ccaagctgcg gccgggctca agaatgagtt tcagacggcg
     2641 tgtgccgatc agtttttgaa ccgcttgggc atacgcgccc aaatcaggca ctttttcgtt
     2701 ttggtaaaca atgccgacgc cgccgcctaa gtccaaatgt tccaaaacaa tgccttcggc
     2761 ggcaagcgcg tcaaccaaaa tcaaaatgcg ttcgcaggct tcgaccagcg ggcttaagtc
     2821 ggttagttgg gagccgatgt ggcagtcgat gccgatgatt ttcaaattgg gctgttgtgc
     2881 ggcatggcgg taggcttcga gcgcgtcggc gtaggcgata ccgaatttgt tggctttcaa
     2941 acctgtggag atgtaaggat gggttttcgc atcgacatcg ggattgacgc gcagggagac
     3001 gggcgcggtt ttacccaaac gcgcggcaac tttctgaata cggtcgattt cggggatgct
     3061 ttccatattg aagcatttca cgcctgcatt cagcgcgaac tcgatttccg cctcgctttt
     3121 gcctacgcct gaaaatatgg tttttgccgc gtcgccgcct gccgccaaaa cgcgtgccaa
     3181 ttcgccgccg gacacaatgt caaaaccgct ccccaaagaa gcaaagtgtt tgatgatgct
     3241 caggttgcca ttggctttaa ccgcatagca gacgagcggg gagagctcgg caaaggcagt
     3301 ttggtagtgt tcaaatgctt cggtcagcgc ggattggctg tacacataaa gcggtgtgcc
     3361 gaatgcttcg gcaaggcggg ggtaggggac ttgttcgcaa aacagggtca tgttttcgtt
     3421 ttcatttttg ggttggaggg gcggattgcg gtttgctttg aagctgcaaa ccggtttgga
     3481 ttacgccgaa acgcgccttg tcgccttctt tgggcaggtc gaggtcgcct ttgtaaccgc
     3541 aggccgagag caggagggcg gttgccgccg caaaaaatac gccgtatttc atcggtaaac
     3601 ttccttcata agcgcgaatg tggcaagatt cggtatctta aacaaaaaac acgcaaaaag
     3661 ctatgatgac cgaaagcgag tttatccgcg cgagcgaagc attatttgaa cacatcgaag
     3721 accaaatcga cgaaaacggc tgggatttcg actgccggtt tgccggaaac gtcctgacca
     3781 tcgaagccgg agacggcacg caaatcatcg tcaaccgcca cacgcccaat caggaattgt
     3841 ggattgccgc aaaaagcggc ggctaccatt tcgccgagca aaacggcaaa tggctggcaa
     3901 cgcgcgacgg acgcgatttt tacgacattt taaacgaagc cctgagcgcg gcttcgggcg
     3961 aagcggtgga aattgcggaa ttgtgattca gtattcaaat atccctagtt aagaatctat
     4021 tgaccttaaa ggataaccca atgcccctac tagacagttt caaagtcgat cacacccgta
     4081 tgcatgcccc cgccgtacgc gtggcgaaaa ccatgactac gcccaaaggc gacaccatta
     4141 ccgtgtttga cctgcgcttt tgcgttccca acaaagaaat cctgcctgaa aaaggcatac
     4201 acacgctgga gcatttgttc gcaggtttta tgcgcgacca cttgaacggc aacggcgtgg
     4261 aaatcatcga catttccccg atgggctgcc gcaccggttt ctacatgagc cttatcggca
     4321 cgccttccga acagcaggtc gccgatgcgt ggctggcttc gatgcaggat gttttgaatg
     4381 tcaaagacca aagcaaaatc cccgagttga acgaatacca atgcggcact tatcaaatgc
     4441 actcgctcgc cgaagcgcag caaatcgcgc aaaacgtgtt ggcgcgcaaa gtggcggtga
     4501 acaaaaacga agagctgacg ctggatgaag ggctgctgaa cgcctaatcc gccaaaaatg
     4561 ccgtctgaac aagggtttca gacggcattt gccttttccg ttataatctg gggttgtgcg
     4621 ggggcgggtt ttaagccggc atcgtccttc cctatttttt tctgtccctt atcggtttta
     4681 agcgggtttt ttatgtccaa cagacctaca ctcctcctcg ttgacggctc ttcctatctc
     4741 taccgcgcgt atcacgcgat ggggcaaaac ctgaccgcac ccgacggtgc accgacgggc
     4801 gcgctgtatg gcgtattgaa tatgttgcgc cgtttgcggt cggaatatcc gcacgattat
     4861 tgcgcggtgg tttttgatgc gaaaggcaaa aatttccgcc atcaaatgtt tgaagaatac
     4921 aaggcgacgc gcccgccgat gcccgacgat ttgcgcccgc aggcggaagc actgccggat
     4981 ttggtgcgcc tgacaggctg gccggtattg gtgattgggc aggtggaggc ggacgatgtg
     5041 atcggcacgc tggcgaaaca gggggcggaa catggtttgc gagtcattgt ttcgaccggc
     5101 gataaggaca tggcgcagtt ggtggatgag cgcgttacgc tggtgaacac gatgagcagc
     5161 gaaacgctgg acattgaagg cgtgaaggca aaattcggcg tgcgccccga ccaaatccgc
     5221 gattatctcg cgctgatggg cgacaaggtg gacaacgtgc cgggcgtgga aaaatgcggc
     5281 ccgaaaacgg cggtgaagtg gctggaagcc tacggctcgt tgcaaggcgt gatagaacac
     5341 gcttcggaaa tcaagggcaa agtgggcgaa aacctgcaag ccgcgctgcc ccaactgccg
     5401 ctgtcgtatg atttggtcac gattaaaacc gatgtggact tgcacgccga gctttcagac
     5461 ggcatcgaaa gcctgcgccg tactacgccg aaatgggcgc agctggttgt cgatttcaaa
     5521 cgctggggct tccgcacctg gctgaaagaa gcggaatcaa acatgaatac cggctcgacc
     5581 gatgatttgt tcggcagcga cagcatcggc gagcaggcgg ctttgaatgc ggaaatgccg
     5641 tttgaaaaac aagccgaaaa agccaccgcc cccgaaaaac tggattatca agccgttacc
     5701 accgaagcgc agtttgccgc tttgttggac aaactgtcgc gggcggacac aatcggcatc
     5761 gatacggaaa ccacgtcatt agacgcgatg aacgcctcgc tggtcggcat cagcatcgct
     5821 ttccaagcag gcgaagcggt ttacatcccc gtaggacaca gcctgaccgc cgcgcccgaa
     5881 cagcttgatt tgcaagacgt attaggccgt ctgaaaccgc atttggaaaa ccccgccctg
     5941 aagaaaatcg ggcaaaacct caaatacgac caacacgttt tcgctaacta cggcatcgcc
     6001 ctgaacggca ttgccggcga cgctatgctc gcttcctaca tcatcgaaag ccatcttgga
     6061 cacggcttgg acgaattgtc cgaacgttgg ctgggcttgg aaaccattac ctacgaatca
     6121 ttgtgcggta aaggcgcgaa gcaaatcagt tttgccgatg tcgccatcgg gcaggcgacc
     6181 gaatacgccg cccaagacgc cgatttcgcc ttgcgcctcg aagcgcacct gcgcgcgcaa
     6241 atggacgcca aacagcttga aatgtatgaa aaaatggagc tgcccgtcgc gcaagtattg
     6301 tttgaaatgg aacgcaacgg tgtgcaaatc gaccgcgccg aactcgcccg ccaaagcgcg
     6361 gaactcggcg ccgagctgat gaagctcgaa caagaagcct acgccgccgc agggcagccg
     6421 ttcaacctca actcgcccaa acagctgcaa gaaatcctgt tcgacaaaat gggcatcccg
     6481 acaaaagggc tgaaaaaaac cgccaagggc ggcatttcca ccaacgaggc cgtgctcgaa
     6541 cagctcgcgc ccgactaccc cttgcccaaa atcatcctgc aaaaccgcag cctggcgaaa
     6601 ctcaaatcca cctacaccga caaactgccc gacatgattt ctccccggga taaccgcgtg
     6661 cataccacct acgcccaagc cgtcgccatt acaggacgct tggcaagcaa caaccccaac
     6721 ctgcaaaaca tccccatccg caccgccgaa ggccgccgcg tgcgccgcgc ctttaccgcg
     6781 ccaccgggca gcgtcatcgt ttccgccgac tattcccaaa tcgaactgcg catcatggcg
     6841 cacctctctg gagacaaaac cctcattgcc gcattccaaa acggcgaaga cgtacaccgc
     6901 cgcaccgccg ccgaagtgtt cggcactgcg cccgaaaacg tctcgcctga gcaacgccgc
     6961 tacgccaaaa ccatcaactt cggcttaatc tacggtatgg ggcaatacgg ccttgccaaa
     7021 tcattgggca tcgacaacct ttccgccaaa aactttatcg accgctactt cgcccgctac
     7081 cccggcgtcg ccgaatacat gcagcgcacc aaagaacaag ccgccgccca aggcttcgtc
     7141 gaaaccctgt ttggccgccg cctctacctg cccgacatcc gcaacaaaaa cgccaacgcc
     7201 cgcgccggag ccgaacgcgc cgccatcaac gcccccatgc aaggcaccgc ctccgacctt
     7261 atcaaacgcg ccatgataga cgtgtcccgc tggctggttt cagacgacct gaagagcaaa
     7321 ctgattatgc aggtgcatga cgaactggtg ctggaagtcg ttgaaaccga actggatttt
     7381 gtcaaagaaa aactgccgca gattatggcg aaagtgggcg gcggattatt ggatgtaccg
     7441 ctggtggctg aggttggcgt aggggagaat tgggaagagg cacattgatt gaaaggtgtt
     7501 attatgctat ctttatttaa ataaaattta atttttggta tattttttct aaatgttcct
     7561 a
//
LOCUS       DAWGBY010000091         7552 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.091, whole genome shotgun sequence.
ACCESSION   DAWGBY010000091 DAWGBY010000000
VERSION     DAWGBY010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7552
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.091"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            15..419
                     /locus_tag="WHG62_001579"
     CDS             15..419
                     /locus_tag="WHG62_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ1725665.1"
                     /translation="MGSLFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAG
                     HGILYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGW
                     LLFAAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WHG62_001580"
     CDS             complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WHG62_001580"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ1725666.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGQLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMVELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYDLALSWKNK"
     gene            1375..1722
                     /locus_tag="WHG62_001581"
     CDS             1375..1722
                     /locus_tag="WHG62_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ1725667.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1727..2320
                     /locus_tag="WHG62_001582"
     CDS             1727..2320
                     /locus_tag="WHG62_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ1725668.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAMCDCIDSVLLEGM"
     gene            2384..2992
                     /locus_tag="WHG62_001583"
     CDS             2384..2992
                     /locus_tag="WHG62_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ1725669.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3000..3650
                     /locus_tag="WHG62_001584"
     CDS             3000..3650
                     /locus_tag="WHG62_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725670.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3690..4469
                     /gene="map"
                     /locus_tag="WHG62_001585"
     CDS             3690..4469
                     /gene="map"
                     /locus_tag="WHG62_001585"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ1725671.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4624..4923
                     /locus_tag="WHG62_001586"
     CDS             4624..4923
                     /locus_tag="WHG62_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ1725672.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5161..5535
                     /locus_tag="WHG62_001587"
     CDS             5161..5535
                     /locus_tag="WHG62_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ1725673.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5723..7189)
                     /locus_tag="WHG62_001588"
     CDS             complement(5723..7189)
                     /locus_tag="WHG62_001588"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ1725674.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1953 a         2270 c         1848 g         1481 t
ORIGIN      
        1 aagaggcgga atgggtgggc agcctgttcg gcctgcacaa atctttcggt ttccttacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cggttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgccgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaggtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgt cggacacgtc gccatggtcg
      361 tcgtccaccg tgttcaaggc aaagacgtgc tgtaccgcat gacggggcgt gtccgttgat
      421 tccgttcgca ctatggtgcc ggtccgtccg gcatcatttg tttttccaag acagtgccag
      481 atcgtacaaa gctttttttc cctcgcccgt gattttggcg gcaagctccg ccgcctgttt
      541 ggtcggcagc tcggctgtga ggattttcat gatgttttgc gcggactcgg acaagccttc
      601 gtgtttttca tcctgcgccg gataaagcac caacaccatc tcgccgcgcg attggttgcc
      661 gtcggcagac aatgccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt
      721 tttcgtaatt tcgcgcgcca gcattaatcg gcgttcgggg aacaattcca ccatatcggc
      781 aagcgtcgcc ccgatgcggt gcggcgtttc aaacatgacg ataggaaacg ccgcccgcac
      841 ccatttggca aacaatttcc tacgttcgcc cgatttcggc ggtacaaaac cgttgaaata
      901 aaaatcggat cccgccacac cagccacact caaagccgcc atcaccgcgc ttgcgccgac
      961 aacagggaca actttaaacc cgacctcacg cacgcggcgg gcgagtttcg cgcccgggtc
     1021 gcacacggcc ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata
     1081 gccgacaatc ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga cgagttggcc
     1141 ctgaatgccg tacgcgctca aaagctgcgc ggtaacgcgc gtatcttcgg cacagatgat
     1201 gtccgccttt tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg
     1261 cgtggcaacc acgtataatg tccctccgac gacgctgtcg gaggctttct gcaaatgttt
     1321 ctgaaacata agaatgccgt ctgaaaaaca aacattataa aggttaaacc gattatgcgc
     1381 ctaaaccaca aacagggcga ggcaggggaa gatgccgcgc ttgccttcct ccaatcccaa
     1441 ggctgcacac tgcttgcccg caactggcac tgcgcctacg gcgaaatcga cctgattgtc
     1501 aaaaacggcg gcatgattct gtttgttgaa gtaaaatacc gcaaaaatcg gcaattcggc
     1561 ggtgccgcat acagcatttc cccatccaaa ttattgaaac tgcaacgaag tgtagagtat
     1621 tatctgcaac agaacaggtt gacaaacgta ccgtgccgcc tcgacgcggt actcatcgaa
     1681 ggcagccgcc cgcccgagtg gatacagaat attacaggtt gacgatatga cgacattaca
     1741 agaacgcgtt gccgcccatt ttgccgaaag catccgtgcc aagcaggaag ccggaaaagt
     1801 attggtcgag ccgaccgtac aggctgccga gctgatgctg caatgcctga tgaatgacgg
     1861 caaaatcctg gcctgcggca acggcggttc ggctgccgac gcgcaacact tcgccgccga
     1921 aatgaccggc cgttttgaaa aagaacgcat ggaactcgcc gctgtcgcgc tgacaacaga
     1981 cacttccgcg ctgacagcca tcggcaacga ctacggtttc gaccacgtat tcagcaaaca
     2041 ggtgcgcgcg ctcggacgtg caggcgatgt attggtcggc atttccacct ccggcaattc
     2101 cgccaacgtc atcgaagccg tcaaagccgc acacgaacgc gatatgcacg tcatcgcctt
     2161 gaccggccgc gacggcggca aaatcgccgc catactcaaa gacaccgacg ttttgctcaa
     2221 cgttccccat ccgcgcaccg cccgtattca agaaaaccac atcctgctga tacacgccat
     2281 gtgcgactgt atcgactccg tactgctgga aggaatgtaa cccttttcag acggcatggc
     2341 gcaaagcaat gccgtctgaa acgcccaaga aaggaagcac ccgatgaaac ccaaaccgca
     2401 caccgtccgc accctgattg ccgccatttt cagccttgcc cttagcggct gcgtcagcgc
     2461 agtaatcgga agcgccgccg tcggcgcgaa atccgccgtc gaccgccgaa ccaccggcgc
     2521 gcaaaccgac gacaacgtta tggcgttgcg tatcgaaacc accgcccgct cctatctgcg
     2581 ccaaaacaac caaaccaaag gctacacgcc ccaaatctcc gttgtcggct acaaccgcca
     2641 cctgctgctg ctcggacaag tcgccaccga aggcgagaaa cagttcgtcg gtcagattgc
     2701 acgttccgaa caggccgccg aaggcgtata caactacatt accgtcgcct ccctgccgcg
     2761 cactgccggc gacatcgccg gcgacacttg gaacacatcc aaagtccgcg ccacgctgtt
     2821 gggcatcagc cccgccacac aggcgcgcgt caaaatcgtt acctacggca acgtaaccta
     2881 cgttatgggc atcctcaccc ccgaagaaca ggcgcagatt acccaaaaag tcagcaccac
     2941 cgtcggcgta caaaaagtca tcaccctcta ccaaaactac gtccaacgct gactcggcaa
     3001 tgccgtctga accgccttca gacggcattg cccgacaccc caaaagcaca atcaaaatgg
     3061 caaaaaaacc gaacaaaccc ttcaggctga cccccaaact cctgatacgc gtcgtattgc
     3121 tcatctgtat caccgccatc ggcgcattgg caataggcat cgtcagcaca ttcaacccga
     3181 acggcggcaa aaccctccaa accgaaccgc aacacaccga cagcccccgc gaaaccgaat
     3241 tctggctgcc aaacggcgta gtcggacaag atgccgccca acccgaacac caccacgccg
     3301 cctcatccga acccgcacag ccggacggca cagacgaaag cggcagcgga ctgccgtccc
     3361 ctgccgcacc caagaaaaac cgggtcaaac cgcaacctgc cgacacagct caaaccgaca
     3421 ggcagccgga cgacgccgga acacaagctg aaaacacact caaagaaacc cccgtactgc
     3481 ccacaaacgt cccccgtccc gaaccccgaa aagaaacacc cgaaaaacag gcgcagccca
     3541 aagaaacacc caaagaaaaa gaaacgccca aagaaaacca taccaaaccg gacaccccga
     3601 aaaacacgcc gcccaaaccc cataaagaaa ttctcgacaa cctcttctga cccggcacgg
     3661 caggcacacc cgcaatccaa ggaagcatta tgaacggcat catcatcaaa acccccgaag
     3721 aaatcgaaaa aatgcgcgag ctgggcaaac tcgtcgccga agccctcgac tacatcggac
     3781 aattcgtcaa acccggcgta accaccgacg aaatcgacaa actcgtttac gactaccacg
     3841 tcaacgtcca aggcggctat cccgcccccc tgcactacgg caacccgccc taccccaaat
     3901 cctgctgcac ctccgtcaac cacgtcatct gccacggcat tcccgacgac aagccgctca
     3961 aagaaggcga cattatcaac atcgacctca ccatcaaaaa agacggcttc cacggcgact
     4021 ccagccgtat gtttaccgtc ggcaaagtct cccccatcgc ccaacgcctg atcgacgtaa
     4081 cccacgcctc catgatggcg ggcatagaag ccgtcaaacc cggcgcgaca ctgggcgacg
     4141 taggttacgc ctgccaacag gttgccgaaa acgccggcta ttccgtcgta caggaattct
     4201 gcggacacgg catcgggcgc ggtttccacg aagccccgca agtgttgcac tacggaaaaa
     4261 aaggacaggg ccccgttcta aaaccgggta tgatttttac cgtcgaaccg atgatcaacc
     4321 aaggcaaacg ccacctgcgt atcctcaacg acggctggac ggtggttacc aaagaccgct
     4381 ccctctccgc ccaatgggaa cacgaagtct tggtgaccga aaccggctac gaaatcctca
     4441 ccgtcagccc cgcctccggc aaaccctgaa gccggacgta tccgccccat aaaaacaaac
     4501 aatgccgtct gaaagaaacg gcagatatga tatataatat aaaaacaggc ttgacccggc
     4561 acattacgaa aacaaagcaa atcggaattt gccccgcaac cagacaaact taaaggaagt
     4621 tttatgaaaa tatttgaaaa tatagaagat gttaaagcca tccgtaaaaa gaccgggctg
     4681 aaccagatag acttctgggg caaggtcggc gttacccagt ccggaggatc gcgctacgaa
     4741 accggccgca aaatgcccaa acccgtacgc gaactgctcc gcctcgtcca tatcgaatgc
     4801 atcgatttag cgaaagtcaa caaaaaagat atggaaatcg ccgccctgtt gaaaaaacac
     4861 catcccgacc tgtatgccga attgtccaaa cagaccaagt ccgaaagaaa aaaacaaagt
     4921 taaaccgcaa cctccggatg cccgaaggtt tttcatttcc gaaaaacgca aacaatgccg
     4981 tctgaaacac cggacaggcc gccgtatccc gcctgccgcc cctgcctcaa accgccgaac
     5041 cgcccgaacc cgccttttta caaactttat ccaatttcct gtttatttca ggatacgccg
     5101 acattagaat gtcaaacagc tcgaaacggg caaactccac atccatccaa aggaataaaa
     5161 atgaaacttc tgaccaccgc aatcctgtct tccgcaatcg cgctcagcag tatggctgct
     5221 gctgccggca cgaacaaccc caccgttgcc aaaaaaaccg tcagctacgt ctgccagcaa
     5281 ggtaaaaaag tcaaagtaac ctacggcttc aacaaacagg gtctgaccac atacgcttcc
     5341 gccgtcatca acggcaaacg cgtgcaaatg cctgtcaatt tggataaatc cgacaatgtg
     5401 gaaacattct acggcaaaga aggcggttat gttttgggta ccggcgtgat ggatggcaaa
     5461 tcttaccgca aacagcccat tatgattacc gcacctgaca accaaatcgt cttcaaagac
     5521 tgttccccac gttaatcagg caacaaaaaa cagcgttttc agaaatgaaa acgctgtttt
     5581 tttgaccgtt ccattattcg caaaagggaa aaaacgatta cctgccccgt gtatcaaaac
     5641 ctgccctgcc ggatgaaggg cataaccggc agggacggca tcaacaccat atgggggtac
     5701 ggcttttctt gaaagattcg gcttaaatat ccaatacttt cgcggtatag gcgataattt
     5761 catccgccct ttcagggttt tcgttcaact tgatgccgta acccggtacc agctctttca
     5821 gacggtcttc ccaagacggg gcgcgctcgg ggaagcattg gtgcatcagc cggatcatca
     5881 gcggcacagc ggtcgatgcg cccggcgacg cgcccagcaa tgcggcgagt gagccgtcgg
     5941 cgtgggcgac aatctccgta ccaaactgga gcacgccgcc tttttcggag tcttttttaa
     6001 tgatttggac gcgttgccct gcggtgatga gttcccagtc gtcggggttt gcctcggggt
     6061 agtattccag cagggaggcg aagcgttctt ctttggtttt acgcaattcg cccagcaggt
     6121 atttggtcag cggcatattc gcccagccgg cgcacagcat aggatagagg ttgtccatat
     6181 ggatggacag cggcaaatcc ataagcgagc cttgcttgag gaagttggaa cggaagcctg
     6241 cgtaagggcc gaacataagg tggcgtttgc cgtccacgtt gcgtgtgtcg aggtgcggga
     6301 cggacatcgg cggcgcgccg acggaagcct gcccgtacac tttggcgttg tgttgttcgg
     6361 cggtttcggg gttgctgttg cggaagaaca ggccggacac ggggaagccg ccgtagcctt
     6421 tgccttcggg gatgccggat ttttgcagca gggtcagcgc gccgccgccc gcgccgagga
     6481 agaggaagcg ggtacggagg gtgagctgcc cgtcggggtt gcgggtatcg gcggttttga
     6541 gcacccacgc gccgtcggat tcgcgtttga tgtcttcgac gtggcggttg aactcggttt
     6601 ttacgccctt gccctgcaaa tattttacca tttggcgcgt cagccgtccg aaatcgacat
     6661 ccgtaccttc ggcggagtag ttggcggcga cgggttggtt ttcgtcccgg ccgcgcatca
     6721 tcagcggagc ccaatcggaa attttgttcc gatcggtgga aaattccata ttttcaaaaa
     6781 gtttttgggt tttaaacgcg tcataacgtt tttgaagata agaacaatgg tcttcattca
     6841 tcaccaaaga catatgcggc acggcattga tgaaggaatt gtcttccaac ttgccttccg
     6901 cgaccagcgt cgcccaaaac tggcggctga catgaaactg ttcggcaata ttgagggcgc
     6961 gcgccggatc gataatccca tttgcaccca acggcgcata gttcaattcg cacagcgcgg
     7021 aatgccccgt gccggcgttg ttccacgcgt ttgacgattc caacgccaca tcttccaagc
     7081 gttcaatcag ggtgatttcc caagacggtt cgagttcttt gagcaaaacg cccaaagtcg
     7141 cgctcataat gccgccgccc accaagacaa cgtctgtcgc ttcagccatg gtttactcct
     7201 aaaaaacagg catcttctgc ccttatggtt atttgccgta ctacaaacgc ctgaatcgca
     7261 aaagcaggga aaaccggcaa tggtgtgtgt ccgagtatgc tgtttcgggg ttggaatgcg
     7321 ttgcaagcat ggcttccgac accgcttcag gggcttgtaa tatgttatcg tgaatgtagt
     7381 ggattttact gggaaatgca aagtttttct gtcgcccgcc aagtcgggaa actgcgaaat
     7441 gaaaaataaa aatagttatt tatctatata tatcaaattt ttaatagata aaaaatcaaa
     7501 attgtttata tattaatttt taaaagattg tcagcatatt gcgttaagtt tt
//
LOCUS       DAWGBY010000092         7343 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.092, whole genome shotgun sequence.
ACCESSION   DAWGBY010000092 DAWGBY010000000
VERSION     DAWGBY010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.092"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(100..459)
                     /gene="rnpB"
                     /locus_tag="WHG62_001589"
     ncRNA           complement(100..459)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WHG62_001589"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(538..1641)
                     /gene="prfB"
                     /locus_tag="WHG62_001590"
     CDS             complement(538..1641)
                     /gene="prfB"
                     /locus_tag="WHG62_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ1725675.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1744..2637)
                     /locus_tag="WHG62_001591"
     CDS             complement(1744..2637)
                     /locus_tag="WHG62_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ1725676.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATNFETGKTATFN
                     RGNAGQAVRASAAIPNVFQPVIIGRHKYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2979..3428
                     /locus_tag="WHG62_001592"
     CDS             2979..3428
                     /locus_tag="WHG62_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ1725677.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3502..3810
                     /locus_tag="WHG62_001593"
     CDS             3502..3810
                     /locus_tag="WHG62_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725678.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3926..4768
                     /locus_tag="WHG62_001594"
     CDS             3926..4768
                     /locus_tag="WHG62_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ1725679.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4758..5504
                     /locus_tag="WHG62_001595"
     CDS             4758..5504
                     /locus_tag="WHG62_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ1725680.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5526..6113
                     /locus_tag="WHG62_001596"
     CDS             5526..6113
                     /locus_tag="WHG62_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ1725681.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6119..6298
                     /locus_tag="WHG62_001597"
     CDS             6119..6298
                     /locus_tag="WHG62_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ1725682.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6530..6970
                     /locus_tag="WHG62_001598"
     CDS             6530..6970
                     /locus_tag="WHG62_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725683.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1882 a         1945 c         1669 g         1847 t
ORIGIN      
        1 ccgtaccggt ttttgttaat ccactataaa aacacaacct aaataaaaat gccgtctgaa
       61 ccatatttca ggtttcagac ggcatttgcg tgtcggatgc acaccggacg ggcggtaagc
      121 cgggttctgt ctcggacagt cattcctcta ggcataccgt taccggtatg ctcaagcaac
      181 ctacccgaac gctcggcggg cagcgtcatt gcgttctgtt tggtcttgct ccgaatgggg
      241 tttggcctgc cgcatattgt taccaaatgc gcggtgcgcc cttaccgcac cttttcaccc
      301 ttgcctgtgc tgccaaagca gccatcggcg gttttgcttt ctgttccact ttccgtcgcg
      361 ttaccgcgcc cggccgttaa ccggcattct accctgcgga gcccggactt tcctccccgt
      421 atgccttacg cgatacgcgg cgactgtctg ctcgtcccgt gtgcggcgcg gattataaca
      481 cgaaacgcaa aaatgccgtc tgaaacggta caggtttcag acggcatacg gttcaaacta
      541 cacgccctgt ttcaggctgg cttcgataaa gccgtccaaa tcgccatcca atacggcttt
      601 ggtgttgccg acttcgtagc ctgtacgcaa gtctttgata cgtgaggaat ccaaaacata
      661 cgaacggatt tggctgcccc aacctacatc ggatttacct tcttccaacg cctgtttctc
      721 ttcgttgcgt ttgcgcattt ccaattcata cagtttggat ttcaacattt ccatcgcggc
      781 ggctttgttg gcatgttgcg aacggtcgtt ttgacactgc accacaatcc cggtcggctc
      841 gtgggtaatg cgcacggcgg agtcggtttt gttaatgtgc tgaccgccgg caccggatgc
      901 gcggtaagtg tcgatacgca aatcggccgg gttgatttcg atttcgatgg aatcgtcgat
      961 ttcggggtaa acaaacacgg atgaaaaaga cgtatggcgt ttgttgttcg agtcaaacgg
     1021 cgagtagcgc accaagcggt gaacgccggt ttcggtacgc agcaggccgt aggcgtattc
     1081 gccttccact cggatagtgg cgcggttgat gcccgcgatt tcgccgtcgt cttcttcgag
     1141 gatttcgatt ttgaaacctt tgcgctcggc gtagcggctg tacatacgga acagcatacc
     1201 cgcccagtct tccgcttccg tgccgcccgc gcctgcggtg atgtcgatga agcagttgtt
     1261 cgggtcggca ggctggttga acatccgttt gaactccaaa tccgccatct gtttttccaa
     1321 ccccgccaca tcttcctgca cggcggcaaa accttcttcg tcgttttctt cgacggtcat
     1381 ttcaatcagc atgcggttgt cttcgatgcc cgaagcgatg ttgtcgagcg tcaacacgat
     1441 gccttcgagg attttgcgct ctttgccgat ttcttgggcg cgtttcgggt cgttccaaag
     1501 ttcggggtct tcggaaagac cgacaacttc ttccaatcgg tctttcttac cctgataatc
     1561 catataaact cggatgtctt cgctgcgctt ttccaaatca ttcagggtat tgttgagctg
     1621 gttgattact tcggcttcca tgattctttt gttctttcaa aattttaggg gcgtattgta
     1681 cgggattcgg gtattttttt ctatggataa agccttctgg aaacacgttc ggacggcata
     1741 gcgtcaataa cggtatgccg ccagtttgcg tttgatttca ggcaatgcgg cacgtgctgc
     1801 ctcctcaccc aaccggatgg cgcgtttttt ctgatcgaat ccgccgactg cacccaaatc
     1861 caaaacctgc ggtttgataa ccacatccgc ctgccccaac tcattttgca acgcggaaac
     1921 gctcattacg ttcagcgtct gatcgagata agagaagaaa ccttggctga tgtttttgcc
     1981 cggacgggcg gaaatatcga cggcaatcac gaaattcgcc ccctgccgcc gggcggcact
     2041 gacaggcacg ggctgcgaca ggccgccgtc aacatatttg tgcctgccga tgatgaccgg
     2101 ctggaacaca ttgggaatgg cggcggaagc gcgcacagcc tgcccggcat tcccccgatt
     2161 gaaagtggcg gtcttgccgg tttcaaaatt agtggcaacg gcggcaaatt tgatgggaaa
     2221 ctgctgaatc tgcctgccgc cgacttttcg gttgatgtaa ttttgcagct tttcgccttt
     2281 gataaaacca ctggtggaca aggttaaatc gactaaatcg gttttgccta aaatttcggc
     2341 ttccaattcg aggcggtcgg gcgacatacc cgatgcaaaa aggctgccga caatcgaacc
     2401 tgccgatgtg ccggtaacca ccttcacagg aataccgttt tctttcaaaa ccttaataat
     2461 acctacatgg gcaaatcctt tagatgcgcc gccaccgagt gccaaaccga ccactgcggc
     2521 gggtttggcg gtttgcaccg gcttgcgggc agcattattt cccgccgtgc cgcaggcggc
     2581 aagcaacgcg gcggcggcga ttgccaaaag cggtctgatt tttgaaaacg ttaccatatt
     2641 ttccattcct ttatatatcg caccccgtca aaaagaggga ttgcttttct taacaacccc
     2701 ctttgacagc caagcaaatg ggggctttgt taagtcatca tcaaaattaa tatttctttt
     2761 tttcctttac ggaaattata tttgaaggca tactatccaa ggcgggaatt atctcacaac
     2821 accgccgtta tccaaatatc ccgccttttt cctttccttt ccatcaaaat actttctttt
     2881 tatattcatt aacttgttaa atcattggct gccgggtgtc agtttttccg acaaaatccg
     2941 tctaatgggg tatcaacaga accaaaacag gaacacttat gaaaatcgga acaacttggc
     3001 agacggcatc cgctatgctg gttttgcgtc tgtttgccgc atatgaattt ttggaatcgg
     3061 gtttgcaaaa atggaacggg gagaattggt tttccgaaat caacgatcag tttccattcc
     3121 cgttcaactt gctgccggac gcgttaaact ggaatctcgc catgtatgcg gagcttttac
     3181 tgcccgtact gttgcttttg ggtttggcaa cgcgtctgtc ggcattaggg ctgatggtcg
     3241 ttaccgccgt cgcttgggct gcggttcacg ccggttcggg ttacaatgtc tgcgacaacg
     3301 gttataaaat ggctttaatt tatatcgtgg tattaatccc gctgcttttc cagggtgcgg
     3361 gcggatggtc gctggatacg ctgctgaaaa aacggttttg cccccaatgc cgtctgaagc
     3421 aagattgatt cagtcgtgga atctgacttt aaacattcca accttatctc gttaacttga
     3481 tattctgaaa aggaaataga aatgaacaaa aacattgctg ccgcactcgc cggtgcttta
     3541 tccctgtctt tggccgccgg tgcagttgct gccaacaaac cggcaagcaa cgcaacaggc
     3601 gttcataaat ccgcccatgg ctcttgcggc gcgtccaaat ctgccgaagg ttcgtgcggc
     3661 gcggctggtt ctaaagcagg cgaaggcaaa tgcggcgagg gcaaatgcgg tgcgaccgta
     3721 aaaaaaaccc acaaacacac caaagcatct aaagccaagg ccaaatctgc cgaaggcaaa
     3781 tgcggcgaag gcaaatgcgg ttctaaataa tcccacccct tcaaaccaag ccgcgttttt
     3841 cagtaaaatg cggctttttt aacggcaaac aaagattttt taacaagcac atcattcttt
     3901 tgtgccatcc gaaccgggta aaaatatgat tcaacacgca ggcttgggct accgccgcga
     3961 cttggcggaa gactttctct cgctttccga aaacagcccg atatgcttta tcgaagccgc
     4021 accggaaaac tggctgaaaa tgggcggctg ggcgcgcaaa cagtttgacc gtgtggcgga
     4081 acggctgccg ctggcgttgc acggattgtc tatgtcgctg ggcgggcaag caccgctgga
     4141 tactgatttg atagacggca tcaaagaaat gatgcgccgt tacgattgca cgtttttctc
     4201 cgaccatttg agctactgcc acgacggcgg tcatctttac gatttgttgc cgctgccctt
     4261 taccgaggaa atggtgcatc atacggcgcg gcgtatccgc gaagtgcaag accgtttggg
     4321 ctgccgcatc gccgtggaaa acacgtccta ctatctgcat tccccgcttg ccgagatgaa
     4381 cgaggtcgag ttcctcaacg ccgtcgcacg tgaggccgat tgcggcattc atctggatgt
     4441 gaacaatatc tacgtcaacg ccgtcaatca cggcctgttg tcgccggagg cttttttgaa
     4501 aaacgttgac gcagatcgcg tgtgctatat ccatattgcc ggacatgacg tggaaacgcc
     4561 ggaattgttg attgatacac atggcgcggc agttttgccg actgtttggg acttgctcga
     4621 acttgcctat gccaagctgc cgacgattcc gcccaccctg ttggaacgcg attttaattt
     4681 cccgcctttt gccgaactcg aagccgaagt cgccaaaatc gccgattatc aaacgcgtgc
     4741 cggaaaggaa taccgccgtg cagcctgaaa cctccgccca ataccagcac cgtttcgccc
     4801 aagccatacg cgggggcgaa gccgcagacg gtctgccgca agaccgactg aacgtctata
     4861 tccgcctgat acgcaacaat atccacagct ttatcgaccg ctgctatacc gaaacgcggc
     4921 aatactttga cagcgaagaa tggagccgtc tgaaagaagg tttcgtccgc gacgcgcacg
     4981 cccaaacgcc ctattttcaa gaaatccccg gcgagttcct acaatattgc caaagcctgc
     5041 cgctttcaga cggcattttg gcactgatgg attttgaata tacccaattg ctggcagaag
     5101 ttgctcaaat tccggatatt cccgacattc attattcaaa tgacagcaaa tacacacctt
     5161 cccctgcggc ctttatccgg caatatcgat atgatgttac cgatgatttg catgaagcgg
     5221 aaacagcctt gttaatatgg cgaaacgccg aagatgatgt gatgtaccaa acattggacg
     5281 gcttcgatat gatgctgcta gaaataatgg gttcctccgc gctttcgttt gacaccctcg
     5341 cccaaaccct tgtcgaattt atgcctgagg acgataattg gaaaaatatt ttgcttggga
     5401 aatggtcagg ctggactgaa caaaggatta tcatcccctc cttgtccgcc atatccgaaa
     5461 atatggaagg caattccccg ggccaaaacc atctatccgc ataaaattac cttgttcccg
     5521 atactatgcc gctacccgac ctgaccgatg ccgaattaat agagtcgcgt aaactgcttc
     5581 tgcattttgc gcggcttcag ttgcccgacc accctgattt ggctgaagat ttagtgcagg
     5641 aaacattgct gtccgcatac agcgcaggcg acagttttca aggcagggca cttgtcaaca
     5701 gctggctttt tgccatattg aaaaacaaaa ttattgacgc attacgtcaa atcggaaggc
     5761 agaggaaagt ctttaccaca ctggatgacg agctactgga tgaagcattt gaaagccatt
     5821 tttcccaaaa cgggcattgg acgccggaag ggcagccgca acattggaac actccggaaa
     5881 aatcattaaa caacaacgaa ttccaaaaaa ttctgcaaag ctgcctatac aacctgcctg
     5941 aaaacaccgc acgggtattt accctgaagg aaatactcgg tttttcatcc gacgaaatac
     6001 aacaaatgtg cggtatcagc acgtccaact accacaccat tatgcaccgc gcccgagaat
     6061 cattgcgcca atgcctgcaa atcaaatggt tcaaccaaga aaacccgaag taaacgttat
     6121 gaaaaaatgc cgcgatatcg ccctgcttct ttccaaacat caggaccggg aaaccacccc
     6181 gggcgagaag atttccatat acacacacct gttgttctgt ccgtattgcc gtgaatataa
     6241 aagacaactt caaaccatca aaagatcact ggcaaaaaca accagaactt caaaataaat
     6301 gccgtctgaa aaggcttcag acggcataag ctgacggaaa aaaatcaaac cgatttactg
     6361 ttatcggcag ttcatccata atacacgctt caaaagcagc atattcctcc atacggaata
     6421 tataaatacg caaaacacga aggctgcatc aatttgcttt atttgcctta tttcacagac
     6481 ggcgctaccc ctcccgccca acccgttctt tctgaatgag cagatttcaa tgattaagga
     6541 aaccctaatg cgcccaatct tcctatcttt cgttttactc cctattttga taaccgcctg
     6601 cagcacaccg gacaagtctg cccgatggga aaatatcggc acaatctcaa acggcaatat
     6661 tcatacatat atcaataaag acagcgtgag aaaaaacgga aatctgatga ttttccaaga
     6721 taaaaaagtt gttaccaatc taaaacaaga acgttttgcc aacacccccg catacaagac
     6781 tgccattgcc gagtgggaaa tccactgcaa caacaaaaca taccgcttaa gttcgctaca
     6841 gttgtttgat acaaaaaaca cggaaatttc cacacaaaac tacacagcct cttccctccg
     6901 cccgatgagc atcctgtccg ggacattaac cgaaaaacaa tatgaaaccg tatgcggaaa
     6961 aaaactctga ttgcaactta tacacaaact tacccacaaa ccttatcata aaaatgccgt
     7021 ctgaaatact gaaatatcag catttcagac ggcattttgc cattccctga aaattatcca
     7081 caaagttatc cacattattt tttaaaaccg gcttccatcc gaaatatagt ggattaacaa
     7141 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcgaggcaac
     7201 gccgtactgg tttaaattta atccactata taaactcgct atacaatttc actatccaaa
     7261 cgtaaattgt tccattgata cacaaaactg cttaccccca taattttgat aaagcatttc
     7321 ttacattccc ggctccgtcc cgt
//
LOCUS       DAWGBY010000093         7306 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.093, whole genome shotgun sequence.
ACCESSION   DAWGBY010000093 DAWGBY010000000
VERSION     DAWGBY010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7306
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.093"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            35..1390
                     /locus_tag="WHG62_001599"
     CDS             35..1390
                     /locus_tag="WHG62_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ1725684.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWIELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1394..2413
                     /locus_tag="WHG62_001600"
     CDS             1394..2413
                     /locus_tag="WHG62_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ1725685.1"
                     /translation="MSDTPATPATRDFGLIDGCAVTSYVLSNRRGTRVCVLDLGGIVQ
                     EFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEAN
                     EGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDR
                     LTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDL
                     EVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDR
                     NGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTREATIAYG
                     IESLS"
     gene            2647..4905
                     /locus_tag="WHG62_001601"
     CDS             2647..4905
                     /locus_tag="WHG62_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ1725686.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFNVCKFLSVAQKELALIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDGLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFEAEVGSTPETFEKRVIVTTSRDYQGLEAVKTAGRAL
                     SEKIAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDESYLAKEGLE
                     VLVEVSRFWADRVHFSKRSGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYTFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
     gene            4918..5583
                     /gene="pgmB"
                     /locus_tag="WHG62_001602"
     CDS             4918..5583
                     /gene="pgmB"
                     /locus_tag="WHG62_001602"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ1725687.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGETEFAELTHRKNDNYVEMIQAVKPEDVYPGILPLLEA
                     LRANGKKIALASASKNGPFLLERMGLTHFFDAIADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPVGVGKAEDLGSDIALVSGTAGLTYAYLQNVWTQ
                     SGR"
     gene            complement(5747..7255)
                     /gene="nadB"
                     /locus_tag="WHG62_001603"
     CDS             complement(5747..7255)
                     /gene="nadB"
                     /locus_tag="WHG62_001603"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ1725688.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRTILSQGKLAIEWLLAQGVAFDQ
                     NNNGLHLTREGGHTCRRIAHVADYTGEAVMQSLTVQIRCRPNIRVCEQQMALDIQTES
                     GAACGLTVLDCRTQATYSIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARSSENGRTFLISEAVRGEGGILTNQAGERFMPYYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYSLGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAKTSPRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRC
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT         1561 a         2059 c         2100 g         1586 t
ORIGIN      
        1 actatacttt tcaaatcaaa aaaggattta ccttatgtcg gaatatacgc ctcaaacagc
       61 aaaacaaggt ttgcccgcgc tggcaaaaag cacgatttgg atgctcagtt tcggctttct
      121 cggcgttcag acggccttta ccctgcaaag ctcgcaaatg agccgcattt ttcaaacgct
      181 aggcgcagac ccgcacaatt tgggctggtt tttcatcctg ccgccgctgg cggggatgct
      241 ggtgcagccg attgtcggcc attactccga ccgcacttgg aagccgcgtt tgggcggccg
      301 ccgtctgccg tatctgcttt atggcacgct gattgcggtt attgtgatga ttttgatgcc
      361 gaactcgggc agcttcggtt tcggctatgc gtcgctggcg gctttgtcgt tcggcgcgct
      421 gatgattgcg ctgttggacg tgtcgtcaaa tatggcgatg cagccgttta agatgatggt
      481 cggcgacatg gtcaacgagg agcagaaagg ctacgcctac gggattcaaa gtttcttagc
      541 aaatacgggc gcggtcgtgg cggcgattct gccgtttgtg tttgcgtata tcggtttggc
      601 gaacaccgcc gagaaaggcg ttgtgccgca gaccgtggtc gtggcgtttt atgtgggtgc
      661 ggcgttgctg gtgattacca gcgcgttcac gattttcaaa gtgaaggaat acgatccgga
      721 aacctacgcc cgttaccacg gcatcgatgt cgccgcgaat caggaaaaag ccaactggat
      781 cgaactcttg aaaaccgcgc ctaaggcgtt ttggacggtt actttggtgc aattcttctg
      841 ctggttcgcc ttccaatata tgtggactta ctcggcaggc gcgattgcgg aaaacgtctg
      901 gcacaccacc gatgcgtctt ccgtaggtta ccaagaagcg ggcaactggt acggcgtttt
      961 ggcggcggtg cagtcggttg cggcggtgat ttgttcgttt gtattggcga aagtgccgaa
     1021 taaataccat aaggcgggtt atttcggctg tttggctttg ggcgcgctcg gctttttctc
     1081 cgttttcttc atcggcaacc aatacgcgct ggtgttgtct tataccttaa tcggcatcgc
     1141 ttgggcgggc attatcactt atccgctgac gattgtgacc aacgccttgt cgggcaagca
     1201 tatgggcact tacttgggcc tgtttaacgg ctctatctgt atgcctcaaa tcgtcgcttc
     1261 gctgttgagt ttcgtgcttt tccctatgct gggcggcttg caggccacta tgttcttggt
     1321 agggggcgtc gtcctgctgc tgggcgcgtt ttccgtgttc ctgattaaag aaacacacgg
     1381 cggggtttga gcgatgagcg atacccccgc tacccccgct acccgcgatt tcggcctgat
     1441 cgacgggtgt gccgtaacca gctatgtgct gtccaatcgg cgtggtacgc gtgtctgcgt
     1501 gctggacttg ggcgggattg tgcaggaatt ttccgttttg gcagacggcg tgcgcgaaaa
     1561 cctcgtggtg tcgttcgacg atgcggcttc ctatgcggac aatccgtttc agattaacaa
     1621 gcagataggg cgcgtggccg gacgcatccg cggtgcggcg ttcgacatca acggcaggac
     1681 ttaccgcgtg gaggccaacg aaggcaggaa cgcgctgcac ggcggttcgc acgggctggc
     1741 cgttacccgt ttcaacgcgg tggcggcaga cggccgttcg gtggtgctgc gcagccgcct
     1801 gcaacagtcg gccgacggtt atcccaacga tttggatttg gatatttcct accgcttgga
     1861 cgaggacgac cggcttaccg ttagctatcg cgccaccgcg ctcggcgaca cggtgttcga
     1921 cccgacgctg cacatttact ggcggctgga cgcgggcctg cacgatgcgg ttctgcatat
     1981 tccgcagggc ggacatattc cggccgatgc cgaaaaactg cccgtctcaa cggtttcaga
     2041 cgacctcgaa gtatttgatt tcagccggcc caagccgctg gatgccgccg ttgccgccct
     2101 gcgccgcgaa acgggtcggg ccggttttga cgacgcttac cgcgtgccgt ccgatatagg
     2161 ccgtcccgcc gctgtgttgc aagccggacg ccgccgtcgt atcagcatat acagcgaccg
     2221 caacggcttg gtcatcttta ccgccgcccc gcaggatttc gcgcggcacg atgcgggcgt
     2281 ttacgacgcg ctggcgaccg aggcgcagac gctgcccgac agcctgaatt ggcccgagtt
     2341 cggcaatatt cgtctgaaca agggtgatac tagggaggcg acgattgctt acggcatcga
     2401 atccctttct taggagcttc ctaacaccgg ttgcagacgg cctttttata gtggattaac
     2461 aaaaaccggt acggcgttgc ctcggcttag ctcaaagaga acgattctct aaggtgctga
     2521 agcaccaagt gaatcggttc cgtactattt gtactgtttg cggcttcgtc gccttgtcct
     2581 gatttttgtt aatccactat aagatttcac cattccctca aatcaatcca aacaggagct
     2641 tcataaatgt acacaagaat tatggaaatc agcccttgga cgctgcgttc ggcaaagctg
     2701 gaaaaagaac acaaacggct gcaagagagc ctgaccagtt tgggcaacgg ctatatgggt
     2761 atgcgcggca gctttgagga aacctattcc gccgacagcc acttgggcac ctacatcgcc
     2821 ggcgtttggt ttcccgacaa aacccgcgtc ggctggtgga aaaacggcta ccccaaatat
     2881 ttcggcaaag ccatcaacgc gctcaatttc agcaaagtca aaatctttgt cgacggacaa
     2941 gaggtggact tggcgaaaaa cgatgttgcc ggcttctccg tcgaactcga tatgcagcac
     3001 ggcgtgttgc gccgctcgtt caccgtattc ggtgtgcgtt tcaatgtgtg caaattcctg
     3061 tccgtcgcgc aaaaagagct ggctctcatc cgctgggaag ccgtatccgt tgacggcaaa
     3121 acccaccaag tccgcatcga ttccatcatc gatgccgacg tgaaaaacga agattccaac
     3181 tacgaagaaa aattctggca ggtattggac aaaggcgttt cagacggcct atcctacatt
     3241 gccgcccaaa ccgtcgccaa tcccttcggc gtggagcaat tcatcgtcaa cgccgagcaa
     3301 accttcgccg gcagctttaa agccctcggc ggcagccaaa ccgactggca ggtctccaat
     3361 tcttttgaag ctgaagtcgg cagcacgccc gaaacctttg aaaaacgcgt gattgttacc
     3421 accagccgcg attatcaggg cttggaagca gtgaaaaccg caggccgcgc cttgtcggaa
     3481 aaaattgcag gcgttgcgtt tgaaaccttg ctggacgcgc acaaagcagg ctggctgcac
     3541 cgttgggaaa tcgccgacgt ggtcatcgaa ggcagcgacg aagcgcagca gggcatccgc
     3601 ttcaacctgt tccaactgtt ctccacctac tacggcgaag acgcgcgcct gaacatcggc
     3661 ccgaaaggct ttaccggcga aaaatacggc ggcgcgacct attgggacac cgaagcctac
     3721 gccgtaccgc tctatctcgc actggcggaa cccgaagtta cccgcaacct gctgcaatac
     3781 cgccgcaacc aactgccgca ggcgcagcac aacgcgcgcg aacagggctt ggcgggcgca
     3841 ctctatccga tggtaacgtt taccggcatc gagtgccaca acgaatggga aatcaccttc
     3901 gaggaaatcc accgcaatgg cgcgattcct tacgccatct acaactacac caactacacc
     3961 ggcgacgaaa gctatcttgc caaagaaggc ttggaagtct tggtcgaagt gtcccgcttc
     4021 tgggcggacc gcgtccactt ctccaaacgc agcggcaaat acatgattca cggcgtaacc
     4081 ggcccgaacg aatacgaaaa caacatcaac aacaactggt acaccaacac cctcgccgca
     4141 tgggtattgg actacacccg cgaagccctg gcgaaatacc cgcgtccgga tttgaacgtg
     4201 agcgccgccg agttggaaaa atgggcggac atcagcgcga atatgtaccg tcctcatgac
     4261 gaagaactcg gcgtattcgt gcaacacgac ggcttcctcg acaaagacat ccgccccgtg
     4321 tccgcgcttt cgcccgacga tttgccgctc aaccagaaat ggtcgtggga caaaatcctg
     4381 cgttcgccct ttatcaaaca ggcggacgta ttgcaaggca tctatttctt cggcgaccgt
     4441 ttcaatatcg acgaaaaacg ccgcaacttc gacttctacg aaccgatgac cgtgcatgaa
     4501 agctcgttgt cgccgtgtat ccactctatt ctcgccgccg aactgggcaa agaagaaaaa
     4561 gccgtggaaa tgtaccggcg caccgcacgc ctggacttgg acaactacaa caacgacacc
     4621 gaagacggcc tgcacattac ttctatgacc ggctcgtggc tcgccatcgt ccaaggtttc
     4681 gcccaaatga aaacttgggg cggtaaactc agcttcgcac cgttcctgcc gagcgcgtgg
     4741 acaggctaca ccttccatat caactaccga ggccgtctga ttaaagtcgc cgtcggcaaa
     4801 gaaaacgtcg tcttcaccct gctcaaaggc gagccgctcg atttgcaggt gtacggcaaa
     4861 gacatcacac tcaacggcag ccataccgcc gcgttggaaa aataaggagg gcgcaaaatg
     4921 acgtttaccg cagtgctctt cgatctcgac ggcgtcatca ccgacaccgc cgaataccac
     4981 taccgcgcat ggaaaaagct cgccgaagaa ctgggcatcg gcatagaccg caagtttaac
     5041 gagcagctca aaggcgtgtc gcgcgacgat tcgctcaaac gcatcctcgc gcacggcggc
     5101 aaaaccgtcg gcgaaaccga gttcgccgaa ctgacccacc gcaaaaacga caactacgtc
     5161 gagatgattc aggcagtcaa acccgaagac gtgtaccccg gcattttgcc gctgctggaa
     5221 gcattgaggg caaacggcaa aaaaatcgcc ctcgcgtccg ccagtaaaaa cggcccgttc
     5281 ctgctcgaac gcatggggct gacccacttc ttcgacgcca ttgccgaccc tgccgccgtc
     5341 gcgcattcca aacccgcccc cgacatcttc ctcgccgcag ccgagggcgt gggcgcggac
     5401 atccgccgct gtatcggcat cgaagacgca gcagcaggag tagccgccat caaagccgcc
     5461 ggcgccttgc ctgtcggcgt gggcaaagcc gaagacttgg gcagcgacat cgcgctggtc
     5521 tccggcaccg ccgggctgac ctacgcctac ctgcaaaacg tgtggacaca gtcaggcaga
     5581 taaaatactc aggaagtaaa caggccgtct gaaaaatatt tcagacggcc tttctacttt
     5641 tagaacaaaa taataaccca acttacgcaa ccctaaaaac tgaatgccaa tttctcaacc
     5701 atgctattca aatttatttg aacgattttt ttctaaccag ccaaccttaa caatcactat
     5761 taaaatgcgc gccgatgttc tgtctccgcc tgtatgcggc ttgggcgacg gcgaggctgc
     5821 attcgagcag gttgcggttt tcgtattcgg acgcggtgtg cggttcggtt tggttttgtt
     5881 tccaaagccg cagctgggcg atggcgcagc gcagaccggt atcgttgcgg aggatgccca
     5941 gatggcgttg gttgaacgct tgcaggacgg ggcggctgaa tgcgctttgg atgccgtctg
     6001 aaaagatgcc tgcttcggag gagaggcttt cagacggcct tggagacgtt ttggcttgga
     6061 atgcttgtcc gtctgcgatg gtttgggcgg caagtctggc ggtaacgaca cattcgagca
     6121 gggagttgct ggcaaggcgg ttggctccgt gcaagccggt gcaggcggtt tcgcctaagg
     6181 agtagagctg cggcagggaa gttctgccgc aggggtcggt ttggatgccg ccgcaggtgt
     6241 agtgttgcac ggggcggacg gggatggctt ggcgcgtgat atccaggccg cattgggata
     6301 aacagtgccg atggatggac gggaaatgcc ggcggacgaa cgctgcgggt tgatggctga
     6361 tatcgagtga gacgaagtct tgcgtttgtt tggcgatttc ggcggcgatg gcgcgggcaa
     6421 cgatgtcgcg cggcgcgagt tcggcgcggc ggtcgtaata cggcataaac cgttcgcccg
     6481 cttggttggt caggatgccg ccttcgccgc gcacggcttc ggaaatcagg aaggtgcggc
     6541 cgttttcaga cgatcttgcc aagcctgtgg ggtggaattg gataaattcg aggttttcga
     6601 ctgcgcagcc tgcgcgtatc gccatggcga tggcgtcgcc cgtgcattcg ggcggcgtgg
     6661 tggtggcggc gtaaatctgt cccaagccgc cgcctgcgag tacggtatgg cgggcgcgga
     6721 tgctgtaggt tgcttgcgtt cggcagtcga ggacggtcag tccgcacgcc gcacctgatt
     6781 cggtttggat gtccaacgcc atctgctgct cgcaaacgcg gatgttcggg cggcagcgta
     6841 tttggacagt caggctctgc atgacggctt cgcccgtgta gtcggcgacg tgggcgattc
     6901 ggcggcaggt gtgcccgcct tcgcgcgtca ggtgcaggcc gttattattt tggtcgaacg
     6961 ccacgccctg cgccagcagc cattcgattg ccagtttgcc ctgcgacagg atggtgcgga
     7021 cggcggcttc gtcgcacaaa cccgcgcccg cttccaaggt atcggcaacg tgtttttcga
     7081 tgtcgtcctc tcccgaccac gccgccgcaa tcccgccttg cgcatgacgg ctggcagtgt
     7141 cgtccagccg gtttttgcac aaaatgacga tgcggaacga ttcaggcagc gacagggcga
     7201 gcgtcagtgc cgccagcccg tttccggcaa tcaatacgtc gcaatcggtt tgcatggtgt
     7261 tgtccttgtt tgagagatcg tctgaaacgg tatagtggat taaatt
//
LOCUS       DAWGBY010000094         7049 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.094, whole genome shotgun sequence.
ACCESSION   DAWGBY010000094 DAWGBY010000000
VERSION     DAWGBY010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7049
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.094"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..4301)
                     /gene="hrpA"
                     /locus_tag="WHG62_001604"
     CDS             complement(<1..4301)
                     /gene="hrpA"
                     /locus_tag="WHG62_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion exoprotein HrpA"
                     /protein_id="HEZ1725689.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDAKGAVLNNDRNNNPFLAKGSAQLILNEVRGAASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGGADYTEILARAVALQGKLQGKNLAVSTGAQKVDYASGEISAGTAAGTKPTI
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGAAGTFISNGGRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPA
                     ATVLNAGRNLVIESKANVNNAKGSTNLSTGGRTVIKEASIQTGTTVYSSSKGNAELGN
                     NTRITGADVTVLSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGT
                     SKTLTASKDMGVEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSAKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNYSKNELNETKL
                     PVRVVAQTAATRSGWDTVLEGTEFKTTLAGADIQAGVGEKARVDAKIILKGIVNRIQS
                     EEKLETNSTVWQKQAGRGSTIETLKLPSFESPTPPKLSAPGGYIADIPKGNLKTEIEK
                     LAKQPEYAYLKQLQVAKNINWNQVQLAYDKWDYKQEGMTPAAAAVVVIVVTVLTYG"
     gene            complement(4411..6153)
                     /gene="hrpB"
                     /locus_tag="WHG62_001605"
     CDS             complement(4411..6153)
                     /gene="hrpB"
                     /locus_tag="WHG62_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ1725690.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISTFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLVHK
                     TDLTDATGTETESGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRFHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGGTIPGTSRMKIITAGLDAAAPFMLGKQQF
                     SYETAIHAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLSGERGFYWQNTLGWHFHPRH
                     QFYLGADYGRVSGESAQYASGKRLAGAVAGFRGSHKVGGIFAYDLFAGKPLHKPEGFQ
                     TANTVYGFNLNYSF"
     gene            complement(6214..6453)
                     /locus_tag="WHG62_001606"
     CDS             complement(6214..6453)
                     /locus_tag="WHG62_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ1725691.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTDL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGEFCKGLIL"
     gene            complement(6737..7039)
                     /locus_tag="WHG62_001607"
     CDS             complement(6737..7039)
                     /locus_tag="WHG62_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725692.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
BASE COUNT         1604 a         1626 c         1735 g         2084 t
ORIGIN      
        1 ccgtaggtca atacggttac gacgataacg acgacagctg ctgctgcggg tgtcatgccc
       61 tcctgtttgt agtcccattt atcgtaagca agctgcacct gattccagtt gatgtttttc
      121 gcaacttgaa gttgtttcaa ataagcatac tcgggctgtt tggcgagttt ttcgatttcg
      181 gttttgaggt tgcctttggg gatgtcggcg atatagccgc cgggtgcgga cagtttgggc
      241 ggagtagggc tttcgaagct gggcagtttt agcgtttcga tagtgctgcc gcgtccggcc
      301 tgtttctgcc atacggttga gttggtttct aatttttctt ccgactggat acggttcaca
      361 atgcctttga ggataatttt cgcatcgaca cgggcttttt cgcctacacc tgcctgaatg
      421 tcggcaccgg ccagcgtggt tttgaattcg gtaccttcga gcacggtatc ccagcctgaa
      481 cgggtggctg cagtttgggc gacgacgcgg acaggcaatt tggtttcgtt cagttcgttt
      541 ttactgtaat tgctcttgcc taccttgatg ccgataaagc ggcggctttt ttggacatcc
      601 aactcgtgct tgtggatgcc ttcttctgcc agcagttgca gctcttcacc cgcaaccagg
      661 gtaactttac ctgcaggggc attgaagcgg gtggtattag cttcgatgtt gccgcctgcc
      721 tgaagcgtga taccgttggc ggtcagctcg acgggggctg gcataatcag gtggtcgcgg
      781 gtgctggtaa acttggtttt tctgatgatt ttgccgcttt tacctttggt ttttaagaag
      841 gtataggcat cgttttgtcc agcctccagt acaatatcac tatgggcttt gatgtctatg
      901 ctgcctgagg gagctttgat ttcggatgca ccgataataa tacgtgcatc atcgagtgcc
      961 gcagctgcat gaatacttac ccccgtacgt ccggtcaaac gtgaaggctt gttcagagca
     1021 gctttgtcgt agtgactctt gtaggtgggc ttgccaattt catattggtc ggttatgccg
     1081 tcaatcagaa tagcagccgc ctctgaatct gctgcctttg gcaatacgcc tgcggcgtga
     1141 aggttcagtt ttttggaagc ggtaatatcg gaaccgctga tttcgatgcc ttgtgcggaa
     1201 atcaagtcaa tattttgtgc agaaagcttg gcttgcaggt attctttgcc tttgggtttt
     1261 ttacctttaa cttccttgtt gatggcttga atatagaaag cgagacggtc gcgttcttct
     1321 tgcagggttg gaatcagctt gcttttaggc gagctttttt tcaactgcgc aatctgctgt
     1381 tccaattctt tggatttttg gttgagttca gccgcttttt gtgtaggaaa ataattgctg
     1441 aatgagttgt ttacggcttc gatattcaac ttgcctttgg tggtggcgac aaccaagttt
     1501 ttaccggctg taattttaga acctcttaaa tctgtttctc ctgtaaccag acggatattg
     1561 ccttttgctt ccaatgagga aacttgagca ctaggcgcac ctgcatttcc tccttttgca
     1621 gacaacagca attttccgcc tgttttgatg ctcaggtcgg tatgcgcact gatgcggttg
     1681 gcaggttcga tggttaatgt gccgctacct gcttcaatat tcagccgtcc ggccaatggt
     1741 tttaattcgg cattatcttc caaagttttg gtcgaaacgg tactccaatt gatgttgccg
     1801 cgcttgacta gggcggtacc ggcagtaagg ttgattgcac ccgctctcag cgtggtgttg
     1861 tcggcaattt gggaatagcg cgcattgagt gccaatacac cgttagccac cagcttgttg
     1921 gcagaaggca gtttgtcgtt ttgccaaatc tggctgccgg taatgcttag atgacggtgt
     1981 gcgtaggcat ctacttggtt gagcgttacc cgctcgtgtt gtgcattaag atgcgtatta
     2041 tgggtagact ccagcttggt attttctatg ctcaatgccc ggtcggaatg aatgttcaat
     2101 gccccgcttt tggcatggac gttaaggttt tttaagtcgg cattaccacc gttgtttttg
     2161 atgctgatgt gttttccgtt gattgaattg cgttgttttc cgtcaccaag ctgaataccg
     2221 ttgccggcaa ccaacgtaat atctcctgaa gatgaagtga tattggtatt gtctgctttc
     2281 agacggcctt taccaaccga tcctgcattg acatcggcct tggctgtcag ggtattgtga
     2341 ccggtaaagt cggcattacc gttggccaat aaggatacat gaccgtctgc agaaacagca
     2401 tgaaggccgt ctgaaacgat attgccctgc aatgcggtgg tttcgagagc cttggctgcg
     2461 ttcagcttgg tattgcgaag ctgaatattg cctttggctg cctgaatgtg cagattaccc
     2521 gagttggtac gcagattggt attggtaaca ttcagcgagc ctgcctccac acccatgtct
     2581 tttgaggcag tgagggtttt actggtgccg gtaatatggg cagcgttatc cgatttcaaa
     2641 tggatgctgg cggcagacaa atctttatca acattcaaat tcagatcttt acctgtatga
     2701 acatacagat tgccgggagt attcagattg gtagttttgg cagtaatgtt atcgtctgcc
     2761 agtaaagcaa gctgcttgcc gcccttgata ctgcctccgt ttaagcggat atcggaggta
     2821 actgttgaag cttccaaaga aagcggtttg cctgcttcga tgtgtgcggt gtctttggca
     2881 tctattacgg cggaactgct gatggtgccg ttggataata cggtaacatc tgccccggta
     2941 atgcgtgtgt tattgcctaa ttcggcgttg cctttgctgg aactgtatac ggtagtgcca
     3001 gtctgaatac tggcctcctt gatgacggta cggccgccgg tcgacagatt ggtcgaacct
     3061 ttagcattgt tcacatttgc tttgctttcg ataaccaaat tacggccggc atttaatacc
     3121 gtagcagcag ggcggttgcc gttgttttga acgaccgctc cgttacgcaa accgatgtcc
     3181 tccccggtat caataaccaa taagcctttg ctctctatcc ggccgccatt ggagataaat
     3241 gtgcctgccg ctcctttttc ggtggtttcg atggagagat aagtcggtga agcttcggtg
     3301 ccgtcggcag tggtggcgat gcggccgctg ttttcaatgc ggcctgacga agtcacaatc
     3361 aattgcttgg ccgcttcgag tgtgccggca tttttgacgc ctacgccttt ttcattggca
     3421 atcagtgtga tgctgtcggc gtacataccg cccagtgcgg cagtatcaag ggcaatagtc
     3481 ggtttcgtac ccgctgccgt acctgcgctg atttcaccgc tggcgtaatc tactttctgt
     3541 gcgccggtcg aaaccgccag gtttttaccc tgtaatttcc cctgcaaagc aactgcacga
     3601 gcaagtatct cggtgtagtc ggctccgcct ttatcattcc aacctgctgc tcctacggtc
     3661 aatgtgcctt gacgcacatc aaatcctgtc agtgcaccgt ctttgccgat ttggggcgca
     3721 ccggtagtta agatgccccg accgacattt ttaaagccgc cgccattaac ggtaatgccg
     3781 ttggggttgg caataatcac atcggccttt tgaccaccta cggtaacgat gccattgagt
     3841 ttgctggccg caccgcgcac ctcgttcaaa atcaactgcg cactgccttt ggccagaaac
     3901 gggttgttgt tgcgatcgtt gttcagtaca gcacctttag cgtcgacatc aaactgggta
     3961 tagcggttgt ggctcaatcc gcgtccattc ggagtttgga tattcaccaa gggggcacca
     4021 gtgttggttt taaggataac gacctgctgg tttttaggtg ctgatttgtc ggtggtgatt
     4081 tgggcatggg caggcaatac catactcagg gaaaccaaag agcagaccaa ggttttaagg
     4141 gtggttttga gtttgccgca aaggtcgcct gaagttttca gtgaaacaga aaccgaactg
     4201 cctgcctgtt tacctttgcc ctggctgttg gcagtttcgg ctactgcaac catggtgctg
     4261 tgctttttac taaagataat gcgatgtaaa cctttattca tgtctattcc attttgaaga
     4321 tgaacgtact gcgcgccaag tacgtaggta aagtttgaca gtctgaggat aaggaaagac
     4381 cgtctaaata tcagtaaaaa aattcagagg ttagaaactg taattcaaat tgaagccgta
     4441 aacggtgttg gccgtctgaa aaccttcggg cttgtgcagc ggcttgccgg caaataagtc
     4501 ataagcaaat ataccgccta ctttatggct gcctctgaag ccggccactg cacccgccag
     4561 ccgcttgccc gaggcatatt gggcactttc gcccgatacc cgaccatagt ccgcgccgag
     4621 atagaattga tggcgcggat ggaaatgcca gcccaaagtg ttctgccagt agaaacctcg
     4681 ctctccggaa aggctctgtt caccgtcaaa tcctcgaacg gtgtagcggc tgccgataga
     4741 caacttgtct tgggcaacca aaggcgtttt gttccattgt gcatggatag cggtttcgta
     4801 ggaaaactgc tgtttgccca acataaacgg ggccgctgca tccaatccgg cggttatgat
     4861 tttcatacgg gatgtgcctg gaatagtacc gccgccgttt tcttcaggtg cgggcatact
     4921 ttggcgcata ccggtacccc gtttgtaaga taacttgccg tccagttgcc agcggttgag
     4981 gtaagcacgg tggcgcaatt cggcttccca gcctgcagag cggcggcgtt gcacttcgat
     5041 ttcggcatcg tcgatgtatt tataggtttg gcgtgtccat aatttcattc cgactgaagt
     5101 tttatgaaac ctgttacgcc aaagcatgcg ctcggcggcc aggctgctct gatattgttt
     5161 gccgttgtaa tcgtaattga cggaatagcc ttcggttgct tcgtggtaac gatgtccatt
     5221 gtgattaaaa gaaaacagcc atttttttac gggcaccgaa taatgcacgc tgtaacttct
     5281 ggatccgctt tcagtttccg taccggtggc atcagtcaag tccgttttgt gcaccaaacc
     5341 gcgtccatat gaaacataaa acaaatcgct taagcccaaa gggttatcga acgataaagc
     5401 gacatttcct tgatatttgc cggtcgtttt gccgcccgca tcatctatac cgatactgaa
     5461 ccgtatgggt ttattctgct gccatttgat ctgtaaatcg cttttgcctt cttcttcgga
     5521 cggtataatc tgaatatctg ttttaacact cgacaaacga cgcaggtttt ccaagccctg
     5581 ctctacatcg cgaagattga gaattttgtt cctatataag ggaaatttgt tattgaatgt
     5641 actaatactg ccttcggcag acttcccatc ccgtttttct tcatagcgga tatcccctat
     5701 ttcgcctgct gatacccgta atttcagaat tcccgaatcc atattctgtg gttggataat
     5761 agcttgggaa gtgaggtagc cacgcacgat cagtatctgt tgcgcagctt tttgtagcct
     5821 gctcaaatta ttggaaccta aacacatccc agttttaaaa gctgtttctt tcatgagcac
     5881 agaaggaaga aaagaaaatt tgcgcgccgt cttatcatct aaactaatgt aatttacccg
     5941 agtacacggt gtttcatctt cactcaggac ataattgttc ttctccaatg gttgctcgaa
     6001 acggacattt gcatcagtta acaattcagc atctatgtgc tgctgacgct gcatggaacg
     6061 gataagttct gcatcgtttt catcggcagc taaggtttta aggggtatga cagccaggat
     6121 aaccaacaga catggagcag gaaaaaattt catgacatca atattatttt agcaatattt
     6181 actattttgt cataaattta aaagtattta cagttataga atgagacctt tgcaaaattc
     6241 cccaaaattc ccaccaagac atttagggga ttttggggaa ttttgcaaag gtctcggaca
     6301 gtattttgaa cgcagtgcgc gtaaatccgt atggaaacca tgaaatcccg ccacagccgc
     6361 cagacatgcc aagccgcatt ctgatatttc tgtttgcagg ataacaggca gctttttctt
     6421 taagcccaaa gacaggtttt gcagatgggg catagatttc ctttttgaaa aatagggatt
     6481 aggaagttgg atgtatttta gaaaggccgc ctgaaaaggt ttcagacgac cttttgcgac
     6541 tagctgctat tttatttaaa gcttttctct aacaaacgag ctaatatttt tcctgtaata
     6601 aaacagataa aaaacagcat ccaatacgtc agattggaaa aatcggtcgt atagagaatc
     6661 aacatataaa gaagcagcat gatgccgagt gcgatgaatt gataatgttt ggcaaacatc
     6721 atgacctcct caactattaa ggcaaaccgc ctgaatattc tcgttcaatc gtttcggcaa
     6781 tttccctata acgtcgatac catgaccagt cgaaattttc aatggcatgg ctcgcaaacg
     6841 taccaaattc aggcatccct atgcggctac ctgctaaagc tccgattgta gctccccaac
     6901 caggcggatt actgaacgta ttgtttggca atcctaaaga tttatcagga tttcccgtat
     6961 cgttaagccc tgcagattcg caaatttcgc aataatatga gctttgttgc gcattacctg
     7021 agcctccgac ccaagtcatt tcatgaaca
//
LOCUS       DAWGBY010000095         6955 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.095, whole genome shotgun sequence.
ACCESSION   DAWGBY010000095 DAWGBY010000000
VERSION     DAWGBY010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6955
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.095"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            1037..2485
                     /gene="gnd"
                     /locus_tag="WHG62_001608"
     CDS             1037..2485
                     /gene="gnd"
                     /locus_tag="WHG62_001608"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ1725693.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDERAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIICSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPTWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2548..3819
                     /gene="waaA"
                     /locus_tag="WHG62_001609"
     CDS             2548..3819
                     /gene="waaA"
                     /locus_tag="WHG62_001609"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ1725694.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRKSGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGDRQVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACWHALASGAAVQVESADAWREAVEKTLSSKGGGMQMQ
                     VRVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3860..4309
                     /locus_tag="WHG62_001610"
     CDS             3860..4309
                     /locus_tag="WHG62_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ1725695.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGLVSCEARRE
                     VENAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISW"
     gene            4342..5316
                     /locus_tag="WHG62_001611"
     CDS             4342..5316
                     /locus_tag="WHG62_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ1725696.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNSSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFKLAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVQQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEGDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFVFLKYGLA
                     FVLGFIGVKMLIMHWVHIPISVSLSVVFGALGASVLTSLVYTKKQSDK"
     gene            5385..5460
                     /locus_tag="WHG62_001612"
     tRNA            5385..5460
                     /locus_tag="WHG62_001612"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5418..5420,aa:Lys,seq:ttt)
     gene            5679..6932
                     /gene="murA"
                     /locus_tag="WHG62_001613"
     CDS             5679..6932
                     /gene="murA"
                     /locus_tag="WHG62_001613"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ1725697.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGA
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVEQLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
BASE COUNT         1626 a         1689 c         1969 g         1671 t
ORIGIN      
        1 caaaatttca tcattcctac aaaaacagaa aaccaaaaac agaaacctaa aatcccgtca
       61 ttcccacaaa agtgggaatc tagttttttg agtttcagtc attcccgata aattgcctta
      121 gcattgaatg tctagattcc cgcctgcgcg ggaatgacga agccatccgt acggaaacct
      181 gcaccacgtc attcctacga acctgcacca cgtcattccc acgaaagtgg gaatccagaa
      241 tctctaaagc ttcagctaac ctttgaatat tgctgttgtt ctaaggtctg gattcccgcc
      301 tgcgcgggaa tgacggcgga gcggtttctg ttttttctga taaattccta aaacttaaaa
      361 tttcatcatt cccactttcg tgggaatgac gggatgtaag ttcgtgggaa tgacgcggta
      421 caggtttccg ttacgtatcc ccatccgaaa gtttacttat acacaagcaa tccaaagtta
      481 tctgactgaa atattgtgag atttacccgc aaatctcatt ttctccacca cttatacaca
      541 aactcggatg cacactctgc caatatgcag agaaaaagac attcgtgccg ttaacttact
      601 attcccacac gttccaaaca catttccctc tcaaacctcc acagtattcc cgttcttaaa
      661 ggcgccagca gccattcggt aaagaaaagt aggatgccat ctgcacaaca agcaaactgt
      721 ccacaaaaac tattcttcat gaaaaacaat ccacaggtat gcacaaaagg gaatccgcct
      781 taccgacacc cttttaaaac ggcaatctcg atgattttta aaataaaaaa aaagttaccc
      841 acagaaaatg tctcctatca atataatcat cgttttatta tttaaatttt atattttatt
      901 tataagcctt cagggaaacg cacggtaaag cgtaaaggca tcttttcaaa aaattaaaaa
      961 gttaaggatt gttaaacaag tgtaaatcag gtagagttgc ggtcgataaa ttaaatctat
     1021 aacggagctt cctgcaatga aaggcgatat tggtgtaatc ggtttggcgg ttatggggca
     1081 aaacctgatt ttgaatatga acgattgcgg atttaaggtt gtcgcctaca accgaacaat
     1141 cggtaaggtg gacgaatttt taaacggcgc ggctaaggga acggatattg tcggcgcgta
     1201 ttccctgcaa gacttggtcg ataagctggc aaaaccgaga aaaatcatga tgatggttcg
     1261 cgcaggttcg gtggttgacg actttatcga acaactgctt ccgttgttgg aagaaggcga
     1321 catcattatc gacggcggca atgccaatta ccccgacacg acacggcgga cacattacct
     1381 tgccgaaaaa gggattttgt ttgtcggcgc gggcgtatcc ggcggcgaag aaggcgcgcg
     1441 gcacggcccg tctatcatgc cgggcggaga tgagcgcgct tgggaagccg tcaaaccgat
     1501 ttttcaggcg attgccgcca aaacgccgca gggcgaaccg tgttgcgact gggtcggcag
     1561 ggacggcgcg gggcattttg tcaaaatggt gcataacggc atcgaatacg gcgatatgca
     1621 gttgatttgc gaagcgtacc agttcatgaa agacggcttg gggctgtctt acgacgaaat
     1681 gcaccgcgtg tttgccgagt ggaacaaaac cgagctggat tcttatctga ttgaaatcac
     1741 agcggcaatt ttgggctata aggacgaagg cggcgaaccg ctggtcgaga aaatcctcga
     1801 tacggcaggg caaaaaggca cgggcaaatg gacgggcatc aatgctttgg atttgggtat
     1861 tccgttgacg ctgatttccg aagcggtatt cgcccgctgc gtttcgtcgt tcaaagaaca
     1921 gcgcgtgcag accggcaagc tattcgcccg aaccgttacg cccgtcgaag gcggcaaaca
     1981 agaatgggtt gaggcgttga gacaggccct gcttgcatct aaaatcattt cctacgcaca
     2041 aggcttcatg ctgatccgcg aagcgggcga aagctacggc tgggatttgg actacggcaa
     2101 cactgcgctg ctgtggcgcg aggggtgcat catctgcagc gcattcttaa gcaatatccg
     2161 cgacgcgtat gaaaacaatc ccgatttggt gttcttgggt gcggatccgt atttcaaaaa
     2221 tattttggaa aactgcctgc cgacgtggcg caaggtggtt gccaaggcgg tcgaatgcgg
     2281 catccctatg ccttgcatgg cttcggcgat tacgttcttg gacggctaca cgaccgaacg
     2341 tctgcctgcc aacctcttgc aggcacagcg cgactacttc ggcgcgcaca cttacgaacg
     2401 caccgacaaa ccgcgcggcg agtttttcca taccaactgg acgggcaagg gcggagatac
     2461 cgcttcgaca acctacgata tttgattccg ttgccgaaat gccgtccgaa ccgttcggac
     2521 ggcatttgtt ttgcaggaaa tagaaagatg ttccaatggc tttatgatgt attgtggctg
     2581 cttgcgccga tatggatacg gcgttatttg gacaaacgct ccggaagtgc cccggcatat
     2641 cgggcgcatc gggacgagcg tttcggcaag ccgtatccga atcccgttac cggcgcggtt
     2701 tggatacacg ccgtttcggt cggagaaacg cgtgccgccc agcccttgat acgcgagttg
     2761 cggcagcgtt ttcccgatgc gccgctgctg atgacgcaga tgaccccgac gggacgggaa
     2821 accgcgcaag ttctgtttcc tgatgcacaa tgccgttatc ttccgtatga caaaaaaacg
     2881 tgggtacggc agtttttgcg cgaacaccgc ccgatgttcg gcattttgat ggaaaccgaa
     2941 atctggccca acctgatgac ggagtgccgg aaatcgggcg ttccgctgtt tttggcgaat
     3001 gcgcggctgt cggaaaaatc gctaaacggt tatctgaaag tccgccgcct gatccgtcct
     3061 gccgccgctt cgctgacggg ttgtctggcg cagacggagg cggatgcggc gcggttggcg
     3121 aaattgggcg cggcatccgt gcaggtgtgc ggcaatacca aatacgacct gatgccgtcg
     3181 gaacagatga aaacgctggc ggggcagttt gaaaaacgca tcggagaccg gcaggttgcc
     3241 gtgtgcggca gcacgcgcgt ttatcggggt gaagacgagg cggaaaaact gctggcggcg
     3301 tggcaacaat atcgcggcga tgcgctgctg gtcgtcgtgc cgcgccatcc cgagcatttt
     3361 cagacggtat ttgaaacggc aaaacgcttc gggtttaagg ttcagcggcg cagcgacggt
     3421 ttgccggtcg aacctgatac gcaggtgtgg ataggcgaca gtatgggcga gctgtatgcg
     3481 tattacttgt gcgccgatgt cgcttttgtc ggcggcagtc tggtcgattc gggctgtcag
     3541 aacattatcg aaccgctttc ctgcggcgtt ccgacgatat tcggcttttc aacctacaat
     3601 ttttccgaag cctgctggca cgccttggca tcgggggcgg cggttcaagt cgaatcggcg
     3661 gatgcgtggc gtgaagccgt tgaaaaaacc ttatcgtcca aggggggcgg aatgcagatg
     3721 caggtgcgcg tggacggctt tatcgcacaa catcgcggag cgggcgcgag aatcgccgag
     3781 gcggtgcggg aagcggtatg cggacatcgg gggcgatagt gatacaatcc gtatccgagt
     3841 tttccgtttg gagcatcgta tgagtattta tgccgtcgcg cacatcgttc atctgtattg
     3901 cgctattgcc tttgtcggcg gcgtgttttt tgaagtgctg gttttgtccg tcctgcatac
     3961 gggactggtg tcgtgcgagg cgcggcgcga agtggaaaat gcaatgtctt accgcgccgt
     4021 cagggtgatg ccgtttgtgg tcggactgct gttcgccagc ggcatcgtga tggcggcaaa
     4081 ccgctatctt tctatattgg gcgaaccgtt tgccacttcc ttcggtacga tgctgacgct
     4141 gaaaatcctg ttggcgttca gcgtgttggc gcacttcgcc atcgccgtcg tcaaaatggc
     4201 gcgttccaca ctgaccgtcg gctggtcgaa atacatacac accgtcgtct ttacccatat
     4261 gctgctgatt gtctttttgg caaaagcgat gttttatatc agctggtaac acaattacat
     4321 ttcaaatcag gagattgaac catgacagaa tatcccggca tcgggtcgcc gttgttttac
     4381 ggcgtttttt ttgcggcagt gctggtcatg attgccttgg atatgttttc gctgaagaaa
     4441 aacagcagcc ataaagtcgg cgtcaaagaa gccttggcat ggagcggctt gtgggttgcc
     4501 gtatcctgcc tgttcgcagg ctggctgtat ttcaaactcg ccggcaatcc cggctacggc
     4561 gcggcagtcg caaaagaaaa agtattggaa ttctttaccg gctacatttt ggaaaaatcg
     4621 ttggcagtcg acaatatttt cgtgttcctg atgatattcg gctacttcaa agtcgcaccg
     4681 cagtttcagc accgcgtgct gctgtacggc gtattgggcg cattggtatt gcgcactgtc
     4741 atgattttcg tcggcgcggc actggttcag cagttcgagt ggattctgta tctgttcggc
     4801 gcgttcctgc tctataccgg catacacatg atgaagcccg aaggcgatga ggaaggggat
     4861 ttggcaaaca gcaggctgct gaatgccgtc aagaaagtcg ttccggtcgg cacggaattt
     4921 cacggcgaga aattttttac tgtcgaaaac ggtaaaaaaa tcgccacgcc gctgtttttg
     4981 gtgctggtca tgattgaatt gagcgatgtc gtttttgccg tggacagcat ccccgccgtc
     5041 tttgccgtta ccaccgatcc gtttatcgtg ctgacttcca atattttcgc aattctgggc
     5101 ttgcgggcga tgtatttcct gctggcggat gtggcggaac gcttcgtatt cctgaaatac
     5161 ggcttggcat tcgtgttggg ttttatcggt gtgaaaatgc tgataatgca ttgggtgcat
     5221 atcccgattt ccgtttcgct gtcggtcgtg ttcggcgcat tgggtgcatc ggtgttgact
     5281 tcattggttt atacgaaaaa acagtccgat aaataaaatg ccgtctcaac gccgacaaaa
     5341 tggttgacag catcaggctt gatgtataga atttcgagct tgtcgggtcg ttagctcagt
     5401 cggtagagca gcggactttt aatccgttgg tcgagcgttc gaatcgctca cgacccacca
     5461 gataaaacaa aaaagctgag ttttcaaaac tcggcttttt ttgtcttccg acaatccttg
     5521 ttcggaaagc gcggcatttc gtcaaattct ttggtgcggc ttccgtattt ttcccgaaaa
     5581 tcccttataa ttccgcctct gtaaccttca tcgggtgatg ctttatgcgt tgtcccgagt
     5641 attgaaatat tacaagtacc cactaggaaa gaacaaacgt ggacaaactg aaaatctccg
     5701 caaacggccc gctcaacggg gaaataacgg tctcgggcgc gaaaaacgcg gcattgccgc
     5761 tgatgtgcgc gggtttgctg acatcgggta cgttgcgcct gaaaaacgtc cctatgctgg
     5821 cagatgtcaa aaccacgcaa aaactgcttc aggggatggg cgcgcgcgtc ctgaccgaca
     5881 atatcagcga atttgaaatc aacggcggta cggtcaacaa cacgtgcgcc ccttacgagt
     5941 tggttcggac gatgcgcgct tcgattttgg tgctgggccc gacgctggcg cgtttcggcg
     6001 aggcgcaagt cagcctgccg ggcggctgcg ccatcggttc gcgccccgtc gatcagcatt
     6061 tgaaaggctt ggaagcgatg ggggcggaaa tcgtcatcga acacggttac gtcaaggcta
     6121 agggtaaact caaaggtacg cgcgtggcga tggatgtcgt taccgtcggc ggcacggaaa
     6181 acctgctgat ggcggcgacg ctggcggaag gtacgacggt tttggaaaac tgcgccattg
     6241 agcctgaagt ggtcgatttg gcggaatgcc tggtcaaaat gggcgcgaaa atcagcggca
     6301 tcggtacgtc tacaatgatt gtggaaggtg cggacgagct gcacggctgc gaacacagcg
     6361 tcgtccccga ccggattgag gcggggacgt tcctgtgcgc ggtggcgata accggcggca
     6421 gggtggtttt gcggaatgcc gcgccgaaaa cgatggaagt ggtgttggac aaactggttg
     6481 aggcaggtgc ggtgattgaa gcgggcgacg attggatcgc catcgatatg cgtcagcgtc
     6541 cgaaggcggt ggacatccgc acggtcgtcc accccggctt ccccacggat atgcaggcgc
     6601 agtttatggc attgaatgcc gtggcggagg gaagctgccg cgtggtggaa acgatttttg
     6661 aaaaccgctt tatgcacgtc cccgagttga accggatggg ggcgaacatc acaaccgagg
     6721 gcaatacggc atttgtgcag ggggtggaac agctttccgg cgcggtcgtt aaggcgacgg
     6781 atttgcgtgc gtccgcaagc ctcgttatcg ccggtttggc ggcgcgcggc gaaaccgtgg
     6841 tcgaacagat ttaccacttg gatcgcggtt atgaaaatat tgaaaaaaaa ctcggcagcg
     6901 tcggcgcgaa aatcgagcgc gtatccggct gatcgggttg cgatgccgtc tgaag
//
LOCUS       DAWGBY010000096         6950 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.096, whole genome shotgun sequence.
ACCESSION   DAWGBY010000096 DAWGBY010000000
VERSION     DAWGBY010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6950
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.096"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            78..692
                     /locus_tag="WHG62_001614"
     CDS             78..692
                     /locus_tag="WHG62_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ1725698.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGIYILVENNSFDMLWTVLG"
     gene            853..2514
                     /locus_tag="WHG62_001615"
     CDS             853..2514
                     /locus_tag="WHG62_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ1725699.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPTAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTIYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENI"
     gene            2631..3236
                     /locus_tag="WHG62_001616"
     CDS             2631..3236
                     /locus_tag="WHG62_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ1725700.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NYVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            3308..3700
                     /locus_tag="WHG62_001617"
     CDS             3308..3700
                     /locus_tag="WHG62_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ1725701.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGKAHDIWIPVGHVLSLFARETGEGMGFELE
                     KYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3729..3878)
                     /locus_tag="WHG62_001618"
     CDS             complement(3729..3878)
                     /locus_tag="WHG62_001618"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725702.1"
                     /translation="MPSEARIAGSDGIFNVPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(3899..4345)
                     /locus_tag="WHG62_001619"
     CDS             complement(3899..4345)
                     /locus_tag="WHG62_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ1725703.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(4477..4689)
                     /locus_tag="WHG62_001620"
     CDS             complement(4477..4689)
                     /locus_tag="WHG62_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ1725704.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(4978..6828)
                     /locus_tag="WHG62_001621"
     CDS             complement(4978..6828)
                     /locus_tag="WHG62_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ1725705.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKS
                     LGARKQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQL
                     TDDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAKKL
                     YKQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFRNSR
                     TADDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADIP
                     IEGAVYAETIPFSETRDYVKKVMTNAAYYAALFGAPHIPLKQRMGTVPAR"
BASE COUNT         1372 a         1863 c         1902 g         1813 t
ORIGIN      
        1 tttgacgggg ttgaagttga catctacaag gtttaatgtt tgaatacatt taaaaatata
       61 tttgaatgag atgttttatg attcaaaatg ttgttacttc aataatcctg tattctggga
      121 cagccgtaga cttacttatt atcctaatgt tattttttgc caaaagaaaa agcagaaaag
      181 acatcattaa catctattta ggacaatttc taggctctgt tagcctgata ttgctaagtt
      241 tgctttttgc atttgtctta gattatattc ctagtaaaga gattttaggt ttgctcggct
      301 tgattccaat tttcctaggc atcaaagttt tgctgttagg agattctgat ggagaggcta
      361 ttgccaaaga gggtttgcgc aaagataata aaaacctgat ttttctagtc gctatgatta
      421 cttttgcaag ttgtggtgct gacaatattg gtgtctttgt cccatatttt actaccttaa
      481 atttagcgaa tttgatagtg gctttactta cctttctagt catgatttat ctcttggttt
      541 tttctgccca aaaattagca caagtccctt ctgttggaga aactttggaa aaatatagca
      601 gatggtttgt tgctgttgtt tatttaggat tggggatata tatcctggtt gaaaacaaca
      661 gttttgatat gctatggact gtgttgggct aggaaaaaat attatgaaaa agatagtatc
      721 tgcaaagact gccatgtgca gtcttttttg ttgccggtct ttttgtgtct gatgccgtct
      781 gaagcagtct ctgcacgacc tttgtgcgaa tatttgctac acttggcaat ccgtccattt
      841 tttctcacgc ttatgctgac ctataccccg cccgatgccc gcccgcccgc caaaacccac
      901 gaaaagccgt ggctgctgct gttgatggcg tttgcctggt tgtggcccgg cgtgttttcc
      961 cacgatttgt ggaatcctgc cgaacctgcc gtctataccg ccgtcgaagc actggcaggc
     1021 agccccaccc ctttggttgc ccatctgttc ggtcaaaccg atttcggcat accgcccgtg
     1081 tatctttggg ttgccgccgc gttcaaacat ttgctgtcgc cgtgggcagc cgacccgtat
     1141 gatgccgcac gctttgccgg cgtgtttttc gccgttgtcg gactgacttc ctgcggcttt
     1201 gccggtttca actttttggg cagacaccac gggcgcagcg tcgtcctgat tctcatcggc
     1261 tgtatcgggc tgattccagt tgcccatttc ctcaacccca ctgccgccgc ctttgccgcc
     1321 gccggactgg tgctgcacgg ttattctttg gctcgccggc gcgtgattgc cgcctctttt
     1381 ctgctcggta cgggctggac gctgatgtcg ttggcagcag cttatccggc agcatttgcc
     1441 ctgatgctgc ccttgcccgt actgatgttt ttccgtccgt ggcaaagcag gcgtttgatg
     1501 ttgacggcag tcgcctcact tgcctttgcc ctgccgctta tgaccattta cccgctgctc
     1561 ttggcaaaaa cgcagcccgc gctgttcgcg caatggctcg acgatcacgt tttcggtacg
     1621 ttcggcggcg tgcggcacgt tcagacggca ttcagtttgt tttactatct gaaaaacctg
     1681 ctttggtttg cattgcctgc gctgccgctg gcggtttgga cggtttgccg cacgcgcctg
     1741 ttttcgaccg actgggggat tttgggcatt gtgtggatgc ttgccgtttt ggtgctgctt
     1801 gccgtcaatc cgcagcgttt tcaggataac ctcgtctggc tgcttccgcc gcttgccctg
     1861 ttcggcgcgg cgcaactgga cagcctgagg cgcggcgcgg cggcgtttgt caactggttc
     1921 ggcattatgg cgttcggact gtttgccgtg ttcctgtgga cgggcttttt cgccatgaat
     1981 tacggctggc ccgccaagct tgccgaacgc gccgcctact tcagcccgta ttacgttccc
     2041 gacatcgatc ccattccgat ggcggttgcc gtactgttca cacccttgtg gctgtgggcg
     2101 attacccgca aaaacatacg cggcaggcag gcggttacca actgggcggc aggcgttacc
     2161 ctgacctggg ctttgctgat gacgctgttc ctgccgtggc tggacgcggc gaaaagccac
     2221 gcgccggtcg tccggagtat ggaggcatcg ctttccccgg aattaaaacg ggagctttca
     2281 gacggcatcg agtgtatcga cataggcggc ggcgacctgc acacgcggat tgtttggacg
     2341 cagtacggca cattgccgca ccgcgtcggc gatgtacaat gccgctaccg tatcgtccgc
     2401 ttgccccaaa atgcggatgc gtcgcaaggc tggcagacgg tttggcaggg tgcgcgcccg
     2461 cgcaacaaag acagtaagtt cgcactgata cggaaaatcg gggaaaatat ataaaaaaca
     2521 acagattgag ccgaatttct ggattaagtg ccggaaatcg cgtataattg cgcgattaaa
     2581 cctttataaa tcagccgttt tgcaggcatc acacaggagc gacaattatt atgatgaccc
     2641 tctattccgg cattacctgc cccttcagcc accgctgccg cttcgttttg tacgaaaaag
     2701 gcatggattt tgaaatcaaa gacgtcgata tttacaacaa gcccgaagac ctcgccgtca
     2761 tgaacccgta taaccaagtt cccgtgctgg tcgagcgcga tttggtactg catgagtcca
     2821 acatcatcaa cgaatacatc gacgaacgct tcccccatcc gcagcttatg cccggcgatc
     2881 ccgttatgcg cggtcggggg cggctggtgc tgtaccgtat ggaaaaagaa ttgttcaact
     2941 acgtccaagt tttggaaaac cccgccgcta ccaacaagga acaggcaaaa gcgcgcgaag
     3001 ccatcggcaa cggcctgacg atgctcgccc cttcgttcag caaaagcaaa tacatcctcg
     3061 gcgaagattt ttctatgatt gatgtcgccc ttgctccgct gctgtggcgg ctcgaccact
     3121 acgatgtcaa actgggcaaa agtgccgcgc cgctgcttaa atacgccgag cgcatcttcc
     3181 agcgcgaagc ctttatcgaa gcactgacac ccgccgaaaa agccatgcgc aaataagccc
     3241 ggaatgcttg caaaacccgc cgttttgcag gcattttcac attcaggcac accacacgga
     3301 acccatcatg cccacctcaa ccaaacccta catcctccgc gccctctgcg aatggtgcag
     3361 cgacaacagc ctcacaccgc acatccttgt ttgggtcaac gaacacacgc gcgtccccat
     3421 gcagtacgtc cgcgacaacg aaattatgct caacatcggc gcgaccgcca cgcaaaacct
     3481 tcaaatcgac aatgattgga tcagtttttc cgcccgtttc ggcggaaagg cacacgacat
     3541 atggatacct gtcggacacg tcctcagcct tttcgcacgg gagaccggcg aaggtatggg
     3601 gtttgaattg gagaagtacc gacccgatac gccgcctgaa aacacctctg ccgaaaccgc
     3661 gccccggccc gccaaaaaag gcttgaaatt ggtcaaataa atctatgccg tctgaacgga
     3721 atcgtgtttc agacggcatt ttgtccgatg gggcgcaaac ggaatccgtt tatcggcaaa
     3781 acccgtttcg gtgtatcgaa accgtgttgc ccctgccgat tcgatattgg gacattgaaa
     3841 atgccgtctg aacctgcgat acgggcttca gacggcattt ttccttatat tcatacaatc
     3901 aggcggtcag tacggctttc agaattttgt tgacttcgcc catatcggct ttgccggcga
     3961 ggcgggtttt caatacgccc atcactttgc ccatatccgc catacctgcc gcgccggttt
     4021 cggcaacggc ggcatcgacc gcagtacgga tttcgccggc ggagagcatt tgcggcaggt
     4081 agcggtgcag tacctcgatt tcggcgtttt ctttgtctgc caaatcctga cggccggctt
     4141 cagtgtagat tttcgcgctg tctttgcgct gtttgaccat tttggtcagg atggcggtga
     4201 ttttggcatc gtcggcttcg gtgcgttcgt ccacttcaaa ctgtttgacg gcggcgttga
     4261 tgaggcggat ggtgccgagg gaaacttggt ctttggcgcg catcgcggtt ttcatgtctt
     4321 cggtaaggcg gattttcagg ctcataatgt cctcgctggg atgtcggatg gagacggcgg
     4381 gtttcgatgc cgtctgaaaa gcaaaacaca ccgcagagca ggtcttgcgg tgtgtcctca
     4441 tatcacaggg ctgacctgta atctgtactt gaacgtttag tacattttgg gcggcagctg
     4501 ttggctgcgc aggcgttttt gcaggcgttt tacggctgcc gcttttttgc gtttgcgttc
     4561 ggtagtcggt ttttcgtagg cttcgcgggc gcgcagctcg gtcagcaggc cggttttttc
     4621 tacggcgcgt ttgaaacggc gcatagcgac ttcaaagggt tcgttttctt ttacgcggat
     4681 tgcaggcatt ttatttcctt taataaattc tgttgttgca tctgcccatc atatcggtgg
     4741 aaagggtagg gcagacggtg ttgtaggttt tccgtatcgc tgtgcctttc ggcggcggga
     4801 tacgcgccgt gacggaaaca tcacctccta acgggtcggc ttgtgccgtg tcaagctgct
     4861 tgaaaaagca ggaaaaacaa ttttcggatt gtcttatatt tatggttcgc cgtcaatgcc
     4921 gttcgggata aaaatgccgt ctaaaagacc gggcgggttt cagacggcat cggtacgtca
     4981 gcgggcggga acggtgccca tacgctgttt gagcgggatg tgcggcgcgc cgaagagggc
     5041 ggcgtagtag gcggcattgg tcatcacttt tttgacatag tctcgcgttt cggaaaacgg
     5101 gatggtttcg gcatataccg cgccctcaat ggggatatcc gcctgccatc ggcgcgccct
     5161 gcctggaccg gcgttatagc ctgcggtggc gaggacttcg ttgttttgca ggcggcgttt
     5221 ggtgtccgcc atataccacg tccccatacg gatattgccg tcggcggtgt agagctgggc
     5281 ggcatccata ccgattttgc cagcgatttc gcgcgcggtg gcaggcataa cctgcatcag
     5341 cccctgcgcg cctacgcggg attgcgcgcc tataacgaag cggctttcct gacgaatcag
     5401 cccataaacc caagccggat cgacattaac attttgcgcg tggcggatta ccgtgtcttt
     5461 aaacggcgaa atatagcgca aggtgtagtt gagtttgcgg tcggtgcgtt ccgcgctgtt
     5521 gaccgccata tcgtaaaaac cgtggtcgaa cgcggtttgc gcggcggtca gcagcttgtc
     5581 ttcgtcaaag ccgcgtgtgg caaaacgcca ttccgcctga gcctgacggc gcattttcgc
     5641 atcgtcggcg gttcggctgt ttcggaacag caccagcgcg cgcttaatcg cgccgtcttc
     5701 cgccatacgg aggacgctgt ttttgccggc atcgggcaca ttgttgcgcg tatcgatttt
     5761 gcgccccaac tcttcccccg ccagcaccgc ataaaaattc ctgcccgtcg ctgctgcctg
     5821 tttgtaaagt tttttcgcct cttgcgtgtt gcccgttgcg gcgcgactgc gtgccagcca
     5881 gtagagccag gtcgggcttt tttgcagttt ttcgggcata tgcgagatta cggaagccag
     5941 ctcgtcccaa cgtcgggcgc gcaaggcggc gcgggcgtac cactcgattt ggtcgtcggt
     6001 cagttggcgg cggtcggcaa ctttgccgta atagtccaag gcggcaggca cattgaggtt
     6061 ttgcgactga taatgcccca atacgcccca cgcgaaactg cgttgttcga ggcttaaacc
     6121 gctttccatt tcggacagca gggcggcggc attcggcgat ttgcgtgctt ctttgccgat
     6181 gacgttcaac agggcgtatt cgcgcgaacc ttgtgtaccg ccgtcaaacg ggctgcccaa
     6241 tgcggcggca aggttgcgtg cgtctgtggt ttggcggccg gccagcagtc cgcgcacgcg
     6301 cctccaggcg tcgttgccgt ccaacaagcc ggatgcggct gcctgttcca acagtttggt
     6361 gcagcccgaa ggcagtttgc ccgtattttt gaccagttcg gcggcacgcg tatagtcgtt
     6421 gcggctcgaa tcggcgtagc attcgacttc ttgggcgcgc cctgccggtt cgagtttggc
     6481 atattcctgt gcaaacagcg tccactgttt gcgtgcgccc aaagacttca gccactcgtt
     6541 gcggacattt tccgccatcg cactgtcgcc ggcgttttcc aaataggcgg cgacggcggc
     6601 atcgtttttc tgtttcactg catccagtgc ggacgggtag ccgccgtaat ctgccagcgt
     6661 ttttccttcg ggttcggcag ggcgggtggg aacgcttgcc gaaaggtcgg cagtttctat
     6721 attgtctgcc ggggtcttgc cggctggcag tgtgtttgtc gaagaacacg cggcaagcac
     6781 cagggccgcc agcagcggca gggaatgctt catagagggt aggtacatcg gatttcctta
     6841 agaatcggaa ccctgaacgg tcagggttgg aaaagacaaa atgccgtctg aacaggcgtt
     6901 tgcccgaatt atatgccgaa actgcaccgc ctttggaatg tttccgacat
//
LOCUS       DAWGBY010000097         6917 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.097, whole genome shotgun sequence.
ACCESSION   DAWGBY010000097 DAWGBY010000000
VERSION     DAWGBY010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6917
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.097"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(78..1424)
                     /gene="mnmE"
                     /locus_tag="WHG62_001622"
     CDS             complement(78..1424)
                     /gene="mnmE"
                     /locus_tag="WHG62_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ1725706.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1555..1710
                     /locus_tag="WHG62_001623"
     CDS             1555..1710
                     /locus_tag="WHG62_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725707.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1707..2138
                     /locus_tag="WHG62_001624"
     CDS             1707..2138
                     /locus_tag="WHG62_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ1725708.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2272..6630
                     /gene="app"
                     /locus_tag="WHG62_001625"
     CDS             2272..6630
                     /gene="app"
                     /locus_tag="WHG62_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ1725709.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFTYKIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGRKYIDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPRQNGKYSFHD
                     NNNGTGKIDAKHEHNSLPNRLKTRTVQLFNVSLSETAQEPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGTVILDQQADDKGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNATTTST
                     VTITGNESITQPSGKNINRLNYSKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLL
                     LSGGTNLNGNITQTNGKLFFSGRPTPHAYNHLGSGWSKMEGIPQGEIVWDNDWINRTF
                     KAENFHIQGGQAVISRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCV
                     EKTITDDKVIASLTKTDISGNVSLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQ
                     NGNLSLVGNAQATFNQATLNGNTSASGNASFNLSNNAAQNGSLTLSDNAKANVSHSAL
                     NGNVSLADKAVFHFENSRFTGQLSGSKDTALHLKDSEWTLPSGTELGNLNLDNATITL
                     NSAYRHDAAGAQTGSVSDTPRRRSRRSLLSVTPPTSVESRFNTLTVNGKLNGQGTFRF
                     MSELFGYRSDKLKLAESSEGTYTLAVNNTGNEPVSLDQLTVVEGKDNKPLSENLNFTL
                     QNEHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAEKDNAQSLDALIA
                     AGRDAAEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQREAETRPATTA
                     FPRARRARRDLPQPQPQPQRDLISRYTNSGLSEFSATLNSVFAVQDELDRVFAEDRRN
                     AVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTFDDGI
                     GNSARLAHGAVFGQYGIDRFDIGISAGAGFSSGSLSDGIGSKIRRRVLHYGIQARYRA
                     GFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQHISI
                     TPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAAAKGP
                     QLEAQHSAGIKLGYRW"
BASE COUNT         1840 a         1988 c         1687 g         1402 t
ORIGIN      
        1 accaaacgga tcggattccc gtttttatgg gataacggaa tgttcagccg gacaccgcca
       61 cgatgctttc gatccgttta ttttccgata caaaacctcg aaaaaatcac gccgagcagg
      121 tcgtccgccg taaactcgcc cgtgatttcg ccgcatgcga cctgcgccaa gcgcaagtgt
      181 tcggcaaaca gctcgatttg atggttgccg cacaatgccg ccagcgacaa ttcttcctgc
      241 gctgctttga gtgcgttgac gtgccgcgtc cgcgccaaaa acagcccttc gccctcgccc
      301 tgccatccgg cctcgcgcaa caacgtccgt ttcagcgcgt ccaagccgtc gccggttttc
      361 gccgacagcg cgatgacggt ttccgcgccc gtaccgaacc cgcctgccgc gtgtgcgtgc
      421 aaatcggatt tgctgtggat ttcgatgcgt ttcaactccg gcggcaacgc gtccaaaatc
      481 gcccgtgtct tgtcgttcac gccttcgcgc ggatcgacca acaccagcgc gacatcggct
      541 tcggatacgg ctttgcggct gcgttcgatg ccgatgcgtt cgaccacgtc gtccgtctcg
      601 cgcaaacctg ccgtatcgac aatatgcacc ggaacgccgt caatcaggat acgttccctg
      661 accgcgtcgc gcgtcgttcc ggcaatatcg gtaacaatcg ccacttcgtc gcccgccagc
      721 gcgttcaaca ggctggattt gccgacattc ggcgcgccga ccaatacgac attcagacct
      781 tcgcgcaaaa tcgcgccctg ctgcgcgttg gcaagcacat catccacggc gcggcgcaag
      841 ccgtccagtt tgccgcgtgc gtctgccgct tcgagaaaat caatgtcttc ctcgggaaaa
      901 tctaacgtcg cttcgaccag catccgcaag gtaatcaagt cttcgaccag accgtgtatc
      961 cgccgcgaaa aatcgccttt gagcgagcgc aacgccagac gcgccgccga acggctggat
     1021 gcgtcaatca aatccgccac gccttccgcc tgtgccaagt ccagtttgtc gtttaaaaac
     1081 gcacgcttcg taaactcgcc cggttcggca aggcgcgcgc ccaattccaa acagcggttc
     1141 agcagcatat ccatcactac cggcccgccg tgtccctgaa gctcgataac atcttcgccc
     1201 gtaaaacttg ccggtgcggc aaaaaaaagc aaaagcccgc tgtcgattgc ctgaccgtcc
     1261 gcgtccgtaa aatcagcata ggttgccacg cgcggcttgg gcgttttccc acacaaagcc
     1321 tctgccatcg gcagcaggtt tttccccgat atgcgtatca cgcccacgcc gccgcgcccg
     1381 ggtgcggtag cgactgccgc aatcgttgga acgttatccg acataaaacc cccgaaaatt
     1441 caaaacagcc gcgattatag caaatgccgt ctgaagtccg acggtttggc tttcagacgg
     1501 cataaaaccg caaaaatgct tgataaatcc gtccgcctga cctaatataa ccatatggaa
     1561 aaacgaaaca catacgcctt cctgctcggt ataggctcgc tgctgggtct gttccatccc
     1621 gcaaaaaccg ccatccgccc caatcccgcc gacgatctca aaaacatcgg cggcgatttt
     1681 caacgcgcca tagagaaagc gcgcaaatga ccgaaaacgc acaggacaag gcgcggcagg
     1741 ctgtcgaaac cgtcgtcaaa tccccggagc ttgtcgagca aatcctgtcc gacgagtacg
     1801 tgcaaataat gatagcccgg cgtttccatt cgggaccgtt gccgccgccg tccgacttgg
     1861 cgcaatacaa cgacattatc agcaacgggg cagaccgcat tatggcaatg gcggaaaaag
     1921 aacaagccgt ccggcacgaa accatacggc aagaccaaac cttcaacagg cgcgggcaac
     1981 tgtacggctt catcagcgtc atcctgatac tgctttttgc cgtcttcctc gtatggagcg
     2041 gctaccccgc aaccgccgcc tcccttgccg gcggcacagt ggttgccttg gcgggtgctt
     2101 tcgtgattgg aagaagccga gaccaaggca aaaattaatg acaaatccta gggcgtgctt
     2161 catatccgcc cgaacgccga accgcacata taggcacatc ccgcgcgccg cccggaagcg
     2221 gaagccgcgc cctcccaaac aaacccgaat cccgtcagat aaggaaaaat aatgaaaaca
     2281 accgacaaac ggacaaccga aacacaccgc aaagccccga aaaccggccg catccgcttc
     2341 tcgcctgctt acttagccat atgcctgtcg ttcggcattc ttccccaagc ttgggcggga
     2401 cacacttatt tcggcatcaa ctaccaatac tatcgcgact ttgccgaaaa taaaggcaag
     2461 tttgcagtcg gggcgaaaga tattgaggtt tacaacaaaa aaggggagtt ggtcggcaaa
     2521 tcaatgacaa aagccccgat gattgatttt tctgtggtgt cgcgtaacgg cgtggcggca
     2581 ttggtgggcg atcaatatat tgtgagcgtg gcacataacg gcggctataa caacgttgat
     2641 tttggtgcgg aaggaagcaa tcccgatcaa catcgtttta cttataaaat tgtgaaacgg
     2701 aataattata aagcagggac taacggccat ccttatggcg gcgattatca tatgccgcgt
     2761 ttacataaat ttgtaaccga tgcagaacct gttgaaatga ccagttatat ggatgggcgg
     2821 aaatatatcg atcaaaataa ttaccctgac cgtgttcgta ttggggcagg caggcaatat
     2881 tggcgatctg atgaagatga gcccaataac cgcgaaagtt catatcatat tgcaagtgcg
     2941 tattcttggc tcgttggtgg caataccttt gcacaaaatg gatcaggtgg tggcacagtc
     3001 aacttaggta gtgaaaaaat taaacatagc ccatatggtt ttttaccaac aggaggctca
     3061 tttggcgaca gtggctcacc aatgtttatc tatgatgccc aaaagcaaaa gtggttaatt
     3121 aatggggtat tgcaaacggg caacccctat ataggaaaaa gcaatggctt ccagctggtt
     3181 cgtaaagatt ggttctatga tgaaatcttt gctggagata cccattcagt attctacgaa
     3241 ccacgtcaaa atgggaaata ctcttttcac gacaataata atggcacagg aaaaatcgac
     3301 gccaaacatg aacacaattc tctgcctaat agattaaaaa cacgaaccgt tcaattgttt
     3361 aatgtttctt tatccgagac agcacaagaa cctgtttatc atgctgcagg tggtgtcaac
     3421 agttatcgac ccagactgaa taatggagaa aatatttcct ttattgacga aggaaaaggc
     3481 gaattgatac ttaccagtaa catcaaccaa ggtgctggag gattatattt ccaaggagat
     3541 tttacggtct cgcctgaaaa caacgaaacg tggcaaggcg cgggcgttca tatcagtgaa
     3601 gacagtaccg ttacttggaa agtcaatggc gtggcaaacg accgcctgtc caaaatcggc
     3661 aaaggcacgc tgcacgttca agccaaaggg gaaaaccaag gctcgatcag cgtgggcgac
     3721 ggtacagtca ttttggatca gcaggcagac gataaaggca aaaaacaagc ctttagtgaa
     3781 atcggcttgg tcagcggcag gggtacggtg caactgaatg ccgataatca gttcaacccc
     3841 gacaaactct atttcggctt tcgcggcgga cgtttggatt taaacgggca ttcgctttcg
     3901 ttccaccgta ttcaaaatac cgatgaaggg gcgatgattg tcaatcataa tgccacaaca
     3961 acatccaccg ttaccattac agggaatgaa agtattacac aaccgagtgg taagaatatc
     4021 aatagactta attacagcaa agaaattgcc tacaacggtt ggtttggcga gaaagatacg
     4081 accaaaacga acgggcggct caaccttgtt taccagcccg ccgcagaaga ccgcaccctg
     4141 ctgctttccg gcggaacaaa tttaaacggc aacatcacgc aaacaaacgg caaactgttt
     4201 ttcagcggca gaccgacacc gcacgcctac aatcatttag gaagcgggtg gtcaaaaatg
     4261 gaaggtatcc cacaaggaga aatcgtgtgg gacaacgact ggatcaaccg cacgtttaaa
     4321 gcggaaaatt tccatattca gggcgggcag gcggtgattt cccgcaatgt tgccaaagtg
     4381 gaaggcgatt ggcatttgag caatcacgcc caagcagttt ttggtgtcgc accgcatcaa
     4441 agccatacaa tctgtacacg ttcggactgg acgggtctga caaattgtgt cgaaaaaacc
     4501 attaccgacg ataaagtgat tgcttcattg actaagaccg acatcagcgg caatgtcagc
     4561 cttgccgatc acgctcattt aaatctcaca gggcttgcca cactcaacgg caatcttagt
     4621 gcaaatggcg atacacgtta tacagtcagc cacaacgcca cccaaaacgg caaccttagc
     4681 ctcgtgggca atgcccaagc aacatttaat caagccacat taaacggcaa cacatcggct
     4741 tcgggcaatg cttcatttaa tctaagcaac aacgccgcac aaaacggcag tctgacgctt
     4801 tccgacaacg ctaaggcaaa cgtaagccat tccgcactca acggcaatgt ctccctagcc
     4861 gataaggcag tattccattt tgaaaacagc cgctttaccg gacaactcag cggcagcaag
     4921 gatacagcat tacacttaaa agacagcgaa tggacgctgc cgtcaggcac ggaattaggc
     4981 aatttaaacc ttgacaacgc caccattaca ctcaattccg cctatcgcca cgatgctgca
     5041 ggcgcgcaaa ccggcagtgt gtcagacacg ccgcgccgcc gttcgcgccg ttccctatta
     5101 tccgttacac cgccaacttc ggtagaatcc cgtttcaaca cgctgacggt aaacggcaaa
     5161 ttgaacggtc aaggaacatt ccgctttatg tcggaactct tcggctaccg aagcgacaaa
     5221 ttgaagctgg cggaaagttc cgaaggcact tacaccttgg cggtcaacaa taccggcaac
     5281 gaacccgtaa gcctcgatca attgacggta gtggaaggga aagacaacaa accgctgtcc
     5341 gaaaacctta atttcaccct gcaaaacgaa cacgtcgatg ccggcgcgtg gcgttaccaa
     5401 ctcatccgca aagacggcga gttccgcctg cataatccgg tcaaagaaca agagctttcc
     5461 gacaaactcg gcaaggcaga agccaaaaaa caggcggaaa aagacaacgc gcaaagcctt
     5521 gacgcgctga ttgcggccgg gcgcgatgcc gccgaaaaga cagaaagcgt tgccgaaccg
     5581 gcccggcagg caggcgggga aaatgtcggc attatgcagg cggaggaaga gaaaaaacgg
     5641 gtgcaggcgg ataaagacag cgccttggcg aaacagcgcg aagcggaaac ccggccggct
     5701 accaccgcct tcccccgcgc ccgccgcgcc cgccgggatt tgccgcaacc gcaaccccaa
     5761 ccgcagcgcg acctgatcag ccgttatacc aatagcggtt tgagtgaatt ttccgccacg
     5821 ctcaacagcg ttttcgccgt acaggacgaa ttggatcgcg tgtttgccga agaccgccgc
     5881 aacgccgttt ggacaagcgg catccgggac accaaacact accgttcgca agatttccgc
     5941 gcctaccgcc aacaaaccga cctgcgccaa atcggtatgc agaaaaacct cggcagcggg
     6001 cgcgtcggca tcctgttttc gcacaaccgg accgaaaaca ccttcgacga cggcatcggc
     6061 aactcggcac ggcttgccca cggcgccgtt ttcgggcaat acggcatcga caggttcgac
     6121 atcggcatca gcgcgggcgc gggttttagc agcggcagcc tttcagacgg catcggaagc
     6181 aaaatccgcc gccgcgtgct gcattacggc attcaggcac gataccgcgc cggtttcggc
     6241 ggattcggca tcgaaccgca catcggcgca acgcgctatt tcgtccaaaa agcggattac
     6301 cgctacgaaa acgtcaatat cgccaccccc ggccttgcgt tcaaccgcta ccgcgcgggc
     6361 attaaggcag attattcatt caaaccggcg caacacattt ccatcacgcc ttatttgagc
     6421 ctgtcctata ccgatgccgc ttcgggcaaa gtccgaacgc gcgtcaatac cgccgtattg
     6481 gctcaggatt tcggcaaaac ccgcagtgcg gaatggggcg taaacgccga aatcaaaggt
     6541 ttcacgctgt ccctccacgc tgccgccgcc aaaggcccgc aactggaagc gcaacacagc
     6601 gcgggcatca aattaggcta ccgctggtaa caccggatat gccgaaaggg gtttgacgat
     6661 gccgccgtgc gctgtcaaac cctttttctg ccgccgcctt gtgcctgctc cattgtctga
     6721 taaccgtcaa attgattttt agcccatgtt tggtgggtcg gggaaatcta tatcttcgtc
     6781 cgtgccgaaa tagtctgaga cctttgcaaa attcctttcc ctcccgacag ccgaaatcca
     6841 aacacaggtt ttcggctgtt ttcggctgtt tccgccccag atacctccta attctaccca
     6901 aacgccccct taatcct
//
LOCUS       DAWGBY010000098         6910 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.098, whole genome shotgun sequence.
ACCESSION   DAWGBY010000098 DAWGBY010000000
VERSION     DAWGBY010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6910
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.098"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            137..1720
                     /locus_tag="WHG62_001626"
     CDS             137..1720
                     /locus_tag="WHG62_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ1725710.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDADLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETIDFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLEF
                     DRMKINSQLLLQTILGRFSVSSDNAGKPFFEDHKTYVPARFTDYAAAFVEHGAEAFVR
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            1802..2899
                     /locus_tag="WHG62_001627"
     CDS             1802..2899
                     /locus_tag="WHG62_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ1725711.1"
                     /translation="MNHTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3013..4128
                     /locus_tag="WHG62_001628"
     CDS             3013..4128
                     /locus_tag="WHG62_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ1725712.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQAIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP
                     VCGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     VVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4253..4708
                     /locus_tag="WHG62_001629"
     CDS             4253..4708
                     /locus_tag="WHG62_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ1725713.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RSEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            4779..5255
                     /locus_tag="WHG62_001630"
     CDS             4779..5255
                     /locus_tag="WHG62_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ1725714.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5243..6169
                     /locus_tag="WHG62_001631"
     CDS             5243..6169
                     /locus_tag="WHG62_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ1725715.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTTEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6234..6791
                     /locus_tag="WHG62_001632"
     CDS             6234..6791
                     /locus_tag="WHG62_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ1725716.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDNTIFHRVIGGFVIQGGGLTEDLAQKASDKAVANESGNGLKN
                     TVGTIAMARTADPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMNTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVGQ"
BASE COUNT         1809 a         1693 c         1800 g         1608 t
ORIGIN      
        1 cgccgtctga agccttcgcg cctcccagat gccgtctgaa gtacgctccg cgccttcaga
       61 tggcatttga tttagttgaa cgggtaggat gaattggtta aacttgcggg caatagtgcc
      121 ttcagacaaa caaaatatgc cgaacaaaaa gaaaaaagcc gcctttgcgc gtgctgcaac
      181 ggagaacggt gtgccggacg tgtccaacat caaaaattca tatgatgatt tgatgtatga
      241 atccaaagca ttttcccaaa ccgccatcaa cgccttggag gctcgcgccc gcatgatggg
      301 tttgcagccc gcgcccgccg ccaatgccaa ggtcttggag ctgggctgtt cgatgggcgg
      361 caacatcatc acgcaggctc tttattaccc ggatgcggaa tttgtcggta tcgacttgtc
      421 cggcaggcag gttgcgcagg gcaacgccat cattgaaaaa atgggcttga aaaatgtgcg
      481 tctggaagaa aaagatattt tgaccgtcga tgagtcattc gggaagtttg actatatcat
      541 cgtccacggc atttggtcgt gggtgcctga cgcagttaaa gacaaaattt tttcgatttg
      601 ccggaacaac ttgaccgaac acggcattgc ctatatttca tacaatgttt accccggctg
      661 gaaacggcag gagcagttgc gcgaaattat gtactttgcc ggcagggatg tgcttgaaga
      721 acccttggaa gcacggacgc ggaaaggctt ggacgcgctc aaggcgctgg cggaaatttt
      781 agaaaacgac aagggcttgg acggcggcgg caaacttccg gcgattcaaa aaatattgaa
      841 tcataatttt tattacatcg cacacgaata tatggaggcg tttaacgacc cgatttacgt
      901 caacggcttc atcgaatggg caaaccgcca ccggctggcg tatatcgggg atgccgattt
      961 gcacgcgtct tttgtttctt ggatggcgga gcatacgcgg gagcggattc tggcattggc
     1021 agggggcgat tatattgcca aagaatttta cagcgatatt ttatccgacc gccaattccg
     1081 ccgttcgctt ttatgccgtg aggaagtcgg ggatactgtc aggcgtgatg agtcggttgc
     1141 cgtcgaagtg atagaaagtt tgaatttccg cccggcaaga ggggaaacga tcgactttga
     1201 tgaaaacgat accctgcttt cgggcatacg cgatgtgatg aaaaccggag agccgtttaa
     1261 aacggaagat gttgcggaaa acctcgcccg ccgatttccc ggtctggaat ttgaccgtat
     1321 gaaaatcaat tcccagcttt tattgcaaac cattctcggg cgtttttctg tttcatcaga
     1381 caatgcgggc aaaccatttt ttgaagacca taaaacctat gtgccggcgc gttttacaga
     1441 ttatgccgcc gcctttgtgg aacacggcgc ggaagcgttt gttcggcctg ccaaccgtta
     1501 caacgaaagc accccctcat tcggatacgg gcatttgtac attatgcggc aattatcgcg
     1561 gccgacgagc aaacaggcat tgattgaaac ggttgccgaa aacttgaaca tcgtcagcac
     1621 cacgcccgac ggtttgacat tccatccgcc tgccgaagtg tatgtggaag aaatattggc
     1681 agacttggca gacaggcatt ttctcgtttc ggcggattga cgggcaagtc ccggcggcaa
     1741 tccgtccgat atattttcag acaggaaaga cacacactgc gaaaagcggt acacgacata
     1801 tatgaaccat acatttacct tgcccgatac gcgcccgtat ccccaaaatc cgattaagaa
     1861 ccacctgctg ctcaatgcct accagttggc gcacaattct tcccaggctt cgcgcaaact
     1921 ctcgtccggc caacttcaaa ccgaaatcag ggggatgctt gagcaaaacc actatatcaa
     1981 cctttccctc gcgctgacga tgtcgcccga tgccggaact tatgccgcgc tgctttccag
     2041 tgtgaacgcg gtactcgatt gcgagaaaga aggcgaagtg cagtggttcg ccctgccggt
     2101 cgtgctggtg tccggctgca agaaagaacg ggcaatcgag atgaagctgc cgacggaggc
     2161 attgtttgcc tgtttgcaaa actatccgca cctgcgcgcg ttgacgcaag agacgcaatg
     2221 gctgccttat cttgtacatt cctccgattt gagtgcggtc gcgccggatg agtggtggcg
     2281 tgccaaacaa aataccgaag cggcggcgca acacttacgc cgtttcgccc cgcgcccttt
     2341 gcttttgccc gaagggcagt ccgtccacgt cgtttacgcg ctgggtttcg gcagcggcaa
     2401 agttcagacg gcattgggtc agaaccttct tcaggcaggt ctgcccttga tgcaggtatg
     2461 gcaggaaaat cttgcatcgg aaggcgttac gctgtttgcc aatccgcttt ccccggattc
     2521 tccggtacgc gcgctttccg acggcagcca cacgcgccag cgcatggcga tggatgtgtt
     2581 tgcggcaaac gcgatacgcg ccgtccgtat gcagagtccg cgcgtcggcg tggtcgcagc
     2641 ggcaaaggcg ggcggacaga ttttattcgg gtttaatgcg accgacggcg cgtttgaagt
     2701 cgtgccgcag gtgttttcgt ggcagctttc ctttaccgac aatattggcg ttattcagca
     2761 aaattttttg gatttaatgg cagaatgccg tgtagaacac gtttacctgt tgcacaatcc
     2821 cttgggcgaa caggaaagca tcccgagcta tgcggaagca ttgaaacggg aagggcacaa
     2881 tccgtttttc agcgcatagt gatttgtagt agtgataggc tttctcattt ctataataaa
     2941 tcaaaataaa gagcacaaca ctttttcatt ctgtgttgtg ccttgagtga aacgaaagga
     3001 tgaattataa atatgaagat tgtaattgca ccggattcgt ttaaggaaag cttgacagct
     3061 caacaggtag ctgaagcaat aaaaagaggc ttccaacaag cgatagcaga tgtggaatgt
     3121 ctcctctgtc ctgtcggtga tgggggagaa ggcactgtag atgctatccg acattctctt
     3181 gacctagaag aaaaatgtct ccaagtgaca ggaccttttg gacaaaaaga agtcatgcgc
     3241 tattttcaaa aagaacaact agccctattc gaagttgctg atttggttgg tcttggaaaa
     3301 atcccgctag agaaacgaaa tccattacaa atccaaactc gtggtattgg agaattgatt
     3361 cgccacctca ttagtcaaga aattaaagaa atctatattg gcgttggcgg tacggccagt
     3421 aatgatggag gtattgggat tgctgctggt ttaggttatc aattttatga tgaggatgga
     3481 aatgccttac ccgtttgcgg tcaatcctta ctaaacctag cttctgtttc aacagaaaat
     3541 cgctatgaaa ttcctgaaga tgttcacatt cgtattttag cagatgttgt gagtccctta
     3601 tgtggacacc aaggtgcgac ctatacgttt ggcaagcaaa aagggttgga ttctactatg
     3661 tttgaggtcg tagatcaggc aatacaagat ttttatgaaa aagtctcccc tgcaacatta
     3721 aaacttaaag gagcaggagc tggtggaggc atcgctggtg gtttgtgcgc ctttgctcag
     3781 gcaagtatcg tatctggaat tgacacctgc ctggacttga ttgactttga taagaaagtg
     3841 tcagatgttg acttggttat cgttggtgaa ggaagactag atcgtcaaag tttagcaggg
     3901 aaagcgccta ttggtgtagc aaaaagaacc cctgtcggag ttcctgttgt cgctatttgt
     3961 ggcagtctcg ttgaagattt gccttccctg ccatttgaaa atatccaagc tgccttttct
     4021 attttggaga aaagtgaacc tttagaagat agtttgaaaa atgccagtct ctatttggag
     4081 catacggctt ctaatattgg acacttatta aatatgccta agatttagcc aaaccatttc
     4141 ttccagatgg atgttttggc tggttctgcc ttatgcggtt acgattaacc gaccgatgac
     4201 gtctgaaagg gtttccgctt cagacggcat cgcgccggaa cagggagggg atatgaaaaa
     4261 accgaaaatc ctttttgtct gcctcggcaa catctgccgt tcgccgatgg cggaatacat
     4321 tttgcgccgc cgcgccgccg aagcgggcat tccccttgaa gcggacagcg cggggacatc
     4381 gggctggcac gacggcgaag atatgcaccg cgagacggca aagatattga aaaaacacgg
     4441 tatcgatgct tcaggcttta ccagccgcaa aatccgccaa agcgatgcgg cggcgtttga
     4501 ctgcatcatc gcgatggacg gcaagaattt gtccgaattg gaaagaacct tcggcaggcg
     4561 gtcggaaaaa atattcaagc tgaccgacct gatacccgaa agcggttacg accatgtccc
     4621 cgatccgtgg tacacgggcg attttgaaga aaccttcagg cttgcggatg cgggctgtcg
     4681 ggcattgttg gaaaagattt ccaaataaag caattgaata caaatataaa accgcctcct
     4741 gccgtatcgg ttgttcagac ggcataaaca gggaatttat gaaaacaaat ttcaaacaga
     4801 aaattatcga acaggcacgc agcgaaggct tgcaggtaac cgctttgcgc gagcaggtat
     4861 tagatattgt cttgcagcaa agcggcgtga ttaaagccta caacgtcttg tcgcagatgc
     4921 agcagcaaag cgagggcgtg cttgcaccgc ctaccgccta ccgcgccctt gatttttggg
     4981 cggagcaggg cgttttgcac aaagtggcgg cggtcaacgg ctatattttg tgcagccacg
     5041 cgcagcacga gtgcgacgac cattgccacg accacgaaga agccgaagcg caccacagcg
     5101 cgtttatttt ggtctgcacc gaatgcggca cggcggacga gcaaaccctc agccacgagt
     5161 gggcggcact gcgcgcaggc gttgccgaaa gcggctttgc gctgaaagaa gaacacgttg
     5221 ttttaactgg gatttgtaaa aaatgtcaga agtgaaaaaa accaaagtcc acctgatttc
     5281 aggttttctg ggaacaggca aaaccactgc gctcaaaagc ctgatggcgc aaaaagaccc
     5341 gaacgaaaaa tgggtcatca tcgtcaacga gttcggcgaa atcggtattg acggcgcggt
     5401 attgagcgac aacggcatcc ctgtggcaga aatcgccggc ggctgtttgt gttgcaccgc
     5461 cggcccgcaa atgggcgtaa ccgtgcagaa aatgctgcgc gacgccaagc ccgaccgcct
     5521 gatgattgaa gcaagcggac tggcgcacgc agccagcgtc atcgacgaac tcaaagccaa
     5581 accgctggac agccttttgg aaatcggcgc cgtctttacc gtcgtcaatc cgcgccagtt
     5641 catcaacccc gattacgcgc aacaggcgtt gtataaagac caaatcggca tctgcgacgt
     5701 attggtcgcc agcaaaaccg atttatgcac caccgaacag cttgccgaat ttcacgacaa
     5761 agcggcaaaa ctgttcccgc ccaaagccaa agtggtcgaa gtccaaaacg cacaactcga
     5821 catccggtgg ctcgatattc ccgtcatcga aaaatcacgc taccgcctca aagccctgcc
     5881 ggacaacacc atgggcttcc agtcgcaagg tttcacattc cccgccggac gcgatttcga
     5941 cggcgaaaag ctgaccaact ttttcaacga cctgcccaaa atgaccgaag gactcgtccg
     6001 cgccaaaggc gtgtttcaag tattgggaac gtgggtgtgg ctcaactggg tagacggaca
     6061 gtggggcgcg aaccaagtct catggcggcg cgattcgcgt tttgaattga ttgccaaatc
     6121 gtttgatgcg gatttaatcg aacaaaagct caaagacgca ttggaatagc gttcacgcgc
     6181 cttcagacgg catatgaaat gaaaatgccg tctgaaggtc tgaggaggac gggatgaaac
     6241 ccaaattcaa aaccgtttta accgcgctgc ttttggcggt ttccctgccg tctatggcgg
     6301 caacccatgt tttgatggaa accgatatgg gcaatatccg tttggttttg gacgaatcca
     6361 aagcacccaa aaccgttgcc aatttcgtgc gctatgcccg aaaaggcttt tacgacaata
     6421 cgatttttca ccgcgtcatc ggcggcttcg ttatccaagg cggcggattg accgaggact
     6481 tggcacaaaa ggcaagcgat aaggccgttg ccaacgaatc cggcaacggc ttgaaaaaca
     6541 ctgtcggcac catcgccatg gcgcggacgg ccgatccgga ttccgccacc agccaattct
     6601 ttatcaatct ggcggacaat gattcactca actacaaaaa cggacaatac ggctataccg
     6661 ttttcggcag ggtcgaaagc ggcatgaaca ccgtttccaa aatcgcccgc gtcaaaaccg
     6721 ccacgcgcgg cttttatcaa aacgtacccg tacagcccgt caaaatccgt cgcgttgttg
     6781 tcgggcagta acacgcagac agacgttcag acggcgtcgc ccgtttccca aaaaacgccg
     6841 tttaaattaa aaaaatattt taaaacagac agttgatatt gacaaattca aaccgaggat
     6901 tttaaaatgc
//
LOCUS       DAWGBY010000099         6836 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.099, whole genome shotgun sequence.
ACCESSION   DAWGBY010000099 DAWGBY010000000
VERSION     DAWGBY010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6836
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.099"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(369..1175)
                     /locus_tag="WHG62_001633"
     CDS             complement(369..1175)
                     /locus_tag="WHG62_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ1725717.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHDIPFQFFDALMPSEALEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLQERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISR
                     KAMRFFLDRFAVLPSERLKAVDWMLFSSFLDKGGMTVCQLTPALCIQSETLPSQLKNG
                     RQESYRNRRSPKVLLKRALGKIGREIERARERKRQKKLEKHLGRHVVPFE"
     gene            complement(1217..1312)
                     /locus_tag="WHG62_001634"
     CDS             complement(1217..1312)
                     /locus_tag="WHG62_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lacto-N-neotetraose biosynthesis glycosyl
                     transferase"
                     /protein_id="HEZ1725718.1"
                     /translation="MDIVFAADGRMRRLFTLRQYFGILRRLLKNR"
     gene            complement(1324..2151)
                     /locus_tag="WHG62_001635"
     CDS             complement(1324..2151)
                     /locus_tag="WHG62_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ1725719.1"
                     /translation="MQNHVISLASAAERRAHIAATFGARGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLQERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISR
                     KAMRFFLDRFAALPPEGLHPVDLMMFSDFFDREGVPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQRRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            complement(2193..3242)
                     /locus_tag="WHG62_001636"
     CDS             complement(2193..3242)
                     /locus_tag="WHG62_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ1725720.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLDILIVDDGSTDGTLAIARRFQEQDGRIRILAQPRNSGLIPSLNIGLDELAKSG
                     GGGGYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHEH
                     GKIWKKPTRHEDIATVFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVS
                     KLGRLAYYPEALVKYRLHANQVSSKHSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSL
                     EYRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTPPAGVWLDFAADGRMRRLFT
                     LRQYFGILHRLLKNR"
     gene            complement(3259..5322)
                     /locus_tag="WHG62_001637"
     CDS             complement(3259..5322)
                     /locus_tag="WHG62_001637"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ1725721.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLIAGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVA
                     SFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIQGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALDADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            complement(5343..5753)
                     /locus_tag="WHG62_001638"
     CDS             complement(5343..5753)
                     /locus_tag="WHG62_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HEZ1725722.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFGRFMDELIAYLVVNGFEMAGGGDCGDFSCLFQKSGARSLGETEKKAIISWLA
                     DREDVATLYATPLVDGFYGDDGWENYSETYKQAD"
     gene            complement(5830..6735)
                     /gene="glyQ"
                     /locus_tag="WHG62_001639"
     CDS             complement(5830..6735)
                     /gene="glyQ"
                     /locus_tag="WHG62_001639"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ1725723.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
BASE COUNT         1436 a         1793 c         1888 g         1719 t
ORIGIN      
        1 tttctgtttt tgcgggaatg acgagatttt aggtttctgt ttttggtttt ctgttttcgc
       61 gggaataacg gaattttaag ttttaggaat ttatcggaaa aacagaaatc cccccgccgt
      121 cattcccgcg cagacgggaa tctagaattt taatgcggca agaatttatc ggaaaaaacc
      181 gaagtttaaa gacctagatt cccgcctgcg cgggaatgac gagatttcag gtttctgttt
      241 ttggctttct gttttcgcgg gaatcacgaa ttagggctta cccgaaaaca agtgaaaccg
      301 aacaaaccgg attccccgac ataaatttag ggacagcgca cacccgccaa ataaggaaag
      361 gccaaaacct attcaaacgg gacgacgtgc cgcccgaggt gtttttccaa ttttttctga
      421 cgtttccgtt ccctcgccct ttcgatttcc ctgccgattt ttcccaaagc gcgtttcaac
      481 aaaaccttcg gggagcggcg gttgcggtac gattcctgcc tgccgttttt cagttggctg
      541 ggcagggttt cgctttggat gcacaaggcg ggggtcagtt ggcaaaccgt catcccccct
      601 ttgtcgagaa aactgctgaa cagcatccaa tccaccgcct tcaggcgttc ggacggcaaa
      661 acggcaaacc tgtccaaaaa aaaccgcatc gcttttcggg aaatgatata gcccgccgtc
      721 ccccagtgtt cgctttccaa cagcggaaag gcgcgcccgc agtagtccgc cacgccggag
      781 ggcgaggtca ggacgtgcat aaacatcgtt tccaagcgga cgataaaggc ggaatcgggg
      841 tcaaagcgtt cttgcagcca agcgtcttcg gcaaggaatt tctccgcgcc ttcgccgagt
      901 aaaacgtcgt cctcaaatac ggcgatatac ggcagacctt cgtccaatgc ctgtttccac
      961 aatacggcgt ggctcataaa gcaggctttt tccactccgc tcaaataggg gtgcgccgac
     1021 aaaccgggta cgagttccgc cattgcctgc tccagtgctt cagacggcat cagtgcgtcg
     1081 aaaaactgaa acggaatgtc gtgcctgccg aaggtatcgg caatgtgcgc cctgcgttct
     1141 gcagcggaag ccaagctgat aacgtggttt tgcataattt atcctgtttt ttgtctgttg
     1201 gataaagcgg cgtttttcaa cggtttttca gcaatcggcg caaaatgccg aagtattgcc
     1261 tcaaggtaaa cagccgccgc atcctgccgt ctgctgcaaa tacgatgtcc atctctcctc
     1321 cttttattgg aaaggcacaa tgaactgttc gcgcctttgc cggcgttttt ccctttccct
     1381 gctgattttg gtcaaggcgc ggatcaggcg gcgtttgaat gtgttggcgg gggaatcgcg
     1441 cctttgctgt ttgcggttca ggaggcggtc gtgttcgatc aggctgccca atgcgctgtt
     1501 ttggtcgtga aacttggcat aatgcagctc ttgggcgcat aaggcgggat tgagctggca
     1561 aaccggcact ccttccctgt cgaaaaaatc gctgaacatc atcagatcga cggggtgcag
     1621 cccttcgggc ggcagggcgg caaacctgtc caggaaaaac cgcatcgctt ttcgggaaat
     1681 gatatagccc gccgtccccc agtgttcgct ttccaacagc ggaaaggcgc gcccgcagta
     1741 gtccgccacg ccggagggcg aggtcaggac gtgcataaac atcgtttcca agcggacgat
     1801 aaaggcggaa tcggggtcaa agcgttcttg cagccaagcg tcttcggcaa ggaatttctc
     1861 cgcgccttcg ccgagtaaaa cgtcgtcctc aaatacggcg atatacggca gaccttcgtc
     1921 caatgcctgt ttccacaata cggcgtggct cataaagcag gctttttcca ctccgctcaa
     1981 ataggggtgc gccgacaagc cggggacgag ttccgccatt gcctgttcca gcctttcaga
     2041 cggcatcagt gcgtcgaaaa actgaaacgg gatgccgcgc gcgccgaagg ttgcggcaat
     2101 gtgcgccctg cgttctgcgg cggaagctaa gctgataacg tggttttgca taatttatcc
     2161 tgttttttgt ctgttggata aagcggcgtt tttcaacggt ttttcagcaa tcggtgcaaa
     2221 atgccgaagt attgcctcaa ggtaaacagc cgccgcatcc tgccgtctgc cgcaaaatcc
     2281 agccacacgc cggcgggcgg cgtgtccgtc cgtttgaagc attggtacaa aaaccggcgg
     2341 gcgcgttcaa aatcttcttc cggcaaatgt ttctccagca attcatacgc tactgctttt
     2401 atttggcggt attcaaggct gtcgaaccgg gttttaaaac ccatagactg caaaaaatcg
     2461 tttctggcgg ttttttggat gccttgcgca atttcgtgtt ggcggacgct gtgtttggat
     2521 gaaacctgat tggcgtgaag gcggtatttg accaaggctt cgggataata agccagcctg
     2581 cccaatttgc tgacatcgta ccaaaattgg taatcttccg cccaatcccg ctcggtgttg
     2641 taacgcaatc cgccgtcaat gacgctgcgc cgcataatca tcgtgttgtt gtgtatgggg
     2701 ttgccgaaag gaaaaacggt ggcaatatct tcgtgccggg tcggcttttt ccaaattttg
     2761 ccgtgttcgt ggtgccgcgc cagccggttg ccgtcctttt cttccgacaa aacttccagc
     2821 cacgcaccca tcgcaatgat gctgcggtct ttttccatct cgcccacgat tttctcaatc
     2881 caatcggggg cggcaatatc gtctgcatcg gtacgcgcaa tatatcctcc cccccccccc
     2941 gactttgcca attcatccag cccgatgttt aaagagggaa tcaggccgga attgcgcggc
     3001 tgcgcgagga tacggatgcg gccgtcctgt tcttggaaac gccgggcaat ggcaagcgta
     3061 ccgtctgtcg agccgtcatc gacaatcaaa atatccaagt tgcgccaagt ctgattcacg
     3121 acggcggcta atgattgggc gaaatatttt tctacgttgt aggcgcaaat caatacgctg
     3181 actaaaggct gcaatttatt ctcccgatag gcacgatgcc gtctgaaggc ttcagacggc
     3241 atttggactg tacaacggtt actcgcccaa aagcgcgatg tcggctaccg cgttcatttg
     3301 ttctgccaaa cggttcaaca ggttcaaacg gttttgtttt acggcggcat cttccgccat
     3361 caccatcacg ccgtcaaaga aggcatcgac ttgcggcttg acggaagcca gttcggacaa
     3421 ggcggtttgg aaattgcctt cggcgacggc ggcggcgatt ttcggctgca agccttgcgc
     3481 agcagcaaaa agggcttttt cttcgtcctg ttgcaacagg ctttcgttaa ccgcgcccaa
     3541 ctcggcatcg gcttttttca gcaggttttg cacgcgtttg ttggcggcgg cgagcgcggc
     3601 ggcttcgggc agttgtttga acgcggcaac ggcctgcagt ttggcggtca aatcgtccaa
     3661 acggcgcggc tgtttggcga gtacggcggc aacgatgtct tgcggataat cgttttgcag
     3721 caacacggca aggcgcgcct gcataaagtc ggcggtttca gacggcgttt tttcgttgag
     3781 caaacctttg gggaagctgt cgaaggtcgt ctgaatcagt tcattcacgt ccaaaccata
     3841 ctgcatcagc atccgcaaaa tacccaaggc ggcgcggcgc agggcgtagg ggtctttatc
     3901 gccggtcgga atcaggccga tgccccaaat tccgaccagg gtttccagct tgtccgccag
     3961 tgccacggcg gcggcaattt tgctttcggg cagcttgtcg ccggcaaaac gcggctggta
     4021 gtgctgctcg acggcttcgg cgatttcttc ggtttcgccg tccaagcggg catagtattt
     4081 gcccatcgtg ccttgcaatt cggggaactc gccgaccatt tcggtaacca aatcggcttt
     4141 ggcaagacgc gcggcgcgct cggctgcggc ggcatccgcg tccaacgctt tagcgatgtg
     4201 ggcggcaatg ctttgcaaac gttcgatgcg ttcggcttgc gaaccgattt tgttgtggta
     4261 caccacgttt gccagcttgg gcaggcggct ttccagagtc gctttttggt cttgtttgta
     4321 gaagaactcg gcatcagaca ggcgcgcgcg caagacgcgt tcgttgcctt ggatgatgtg
     4381 cgacgggtct tcggtttgca ggttggagac cagcaggaag cggttcatca gcttgccgtt
     4441 ttgatcgagc agcgggaagt atttttggtt ttgctgcatc gtcaaaatca agcattcttg
     4501 aggcacggcg aggaagtgtt cttcaaaacc ggcttccaat accacaggcc attcgaccag
     4561 cgcggttact tcgtccagca atgcttcatc ggcggcaacg gtcgcgttca gacggcgcgc
     4621 ctgcccttcc aatgccgtct gaatcgcggc tttgcgctcg gcaaacgaag cgacgacttt
     4681 gccttgcccg cgcatttgtt cggcgtagct gtcggcgttt tcaatggtga tttcgccgtt
     4741 ggacaagaag cggtgtccca aggtttgatt gctgctttgc agacccaaaa cgctgacgtt
     4801 tacgatgtcg ccgccgtgca gcacaatcag cccgtgaaca gggcgcacga aggtaaacgt
     4861 gctgctgccc caacgcatca ctttcggaat cggcagtttt ttcactgcgg cattgataat
     4921 gtcttccaaa agttcgccca acggtttgcc ggtttggacg tattcgtagg cgtacacgtc
     4981 ctgcttgccg tcgtggacga tggtcaagtc ttcgattttc gcccctgcac cgcgtgcgaa
     5041 accttccaaa gccttggtcg gcgcaccgtc ttttacggca ttcgccacgg cagggccttt
     5101 tttcacgatt ttctgatcgg cttgcacggc tttgacgttt ttgacttgaa ccgccaaacg
     5161 gcgcggagaa gcgtaggcgg taaattctgc cgcgccggct atcagttgcg ctttttccaa
     5221 gccttcggca acggaagcgg cgaaatggtt gcctaaatta ttcagggctt ttgggggaag
     5281 ttcttcggta aggagttcga ttaaaagggt ttgggtcatc attcggcttt ctttgaattt
     5341 ggttaatctg cctgtttata ggtttcgctg taattttccc agccgtcatc cccataaaaa
     5401 ccgtcaacca gcggggtggc gtacaaagtg gcaacatctt cgcggtctgc cagccaagag
     5461 ataatggctt ttttctcggt ttctcccaag cttcgggcac cggatttttg aaacaggcac
     5521 gaaaaatcgc cgcaatcgcc cccgcccgcc atttcaaagc cgtttaccac aagatacgcg
     5581 ataagctcgt ccataaagcg gccgaacgct tcggcatcgt cctcagcttg gtgcaaactg
     5641 ccttgaacgc cgaaaatcaa tgtttgaaac tcgcccaaat gcagcttttt atgctggcgg
     5701 cggttcattt tgtgcaggcg tttcctgctt ggggtgcgga aatagacagg catgattttc
     5761 ctaaaatata taatggttta cggacgactg ccttatcgtg ccgcccgaac gtaaaaaatc
     5821 gtcgccccct taggcagcat ttgccttcat taaagggaag cccagttttt cgcggctttc
     5881 aacatatttt tgcgccacgg cgcggctcaa tgcacgaata cgtccaatat aagttgcccg
     5941 ctcggttacg gaaatcgcgc cgcgtgcgtc taaaagattg aacgtatgcc ccgctttgag
     6001 aaccagctcg taggcaggca aggcgagggc ggcgttttct tcggcaagca ggcgtttggc
     6061 ttgcgcttcg tagtcgttga actggcgcag cagccaatcg gcatcgctgt attcgaagtt
     6121 gtaggtggat tgttcgactt cgttttggtg gtacacgtcg ccgtaagtta ctgtattacc
     6181 gtccagcgtt tttgcccaaa cgaggtcata gacgttttcc acgccttgca ggtacatcgc
     6241 caagcgttcg atgccgtagg tgatttcgcc gagtacgggg gtgcagtcga tgccgccgac
     6301 ttgttggaaa taggtgaact gggttacttc cataccgttg agccagactt cccagcccaa
     6361 accccacgca ccgagggtgg ggttttccca gtcgtcttcg acaaagcgga tgtcgtgcac
     6421 tttggggtcg atgcccaatt cgcgcaggga gtcgagataa aggtcttgga tattggcggg
     6481 ggcgggtttg agggcgactt ggaattggta atagtgttgc aggcggttgg ggttgtcgcc
     6541 gtagcggccg tctttggggc ggcggctggg ttggacgtag gcggcaaacc aaggctcggg
     6601 cccgagcgcg cgcaggcagg tggcgggatg ggaagtacct gcaccgactt ccatgtcgaa
     6661 gggttggatg acggtgcagc ctttgtctgc ccagaatgtt tgcagtttga agatgatttg
     6721 ttggaaggta agcatggctt atgattcgat aaaataaagg gtttatttta ctgtttccat
     6781 tgctgtttgg ataggtttat ctcgaagaca gactgatttg aaaacacggc atacat
//
LOCUS       DAWGBY010000100         6785 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.100, whole genome shotgun sequence.
ACCESSION   DAWGBY010000100 DAWGBY010000000
VERSION     DAWGBY010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6785
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.100"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(298..1287)
                     /gene="pdxA"
                     /locus_tag="WHG62_001640"
     CDS             complement(298..1287)
                     /gene="pdxA"
                     /locus_tag="WHG62_001640"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ1725724.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAAEAVEAGRLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            1447..2874
                     /locus_tag="WHG62_001641"
     CDS             1447..2874
                     /locus_tag="WHG62_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ1725725.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            3199..5094
                     /gene="mnmG"
                     /locus_tag="WHG62_001642"
     CDS             3199..5094
                     /gene="mnmG"
                     /locus_tag="WHG62_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ1725726.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGERISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQESCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTYEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLNR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLAAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            5163..5747
                     /gene="rnhB"
                     /locus_tag="WHG62_001643"
     CDS             5163..5747
                     /gene="rnhB"
                     /locus_tag="WHG62_001643"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ1725727.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDTLAEMIKDQAAAWHVAAATPEEIASLNILHATMLAMKRAVDGLAVRPEKIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQTLF"
     gene            complement(5882..6253)
                     /locus_tag="WHG62_001644"
     CDS             complement(5882..6253)
                     /locus_tag="WHG62_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725728.1"
                     /translation="MKKIRLLLEFHCFPVWFYDENDEIIENDWCEELLPQEILSDNHL
                     KELCIWLADEFDKLYCDEMGNFDYEKLQDEFSFQTKENEQEFIDKLTEFRTKFTQKCF
                     GFCALQDNLPKIENGKIVSWQ"
BASE COUNT         1658 a         1927 c         1701 g         1499 t
ORIGIN      
        1 cgcccaaagg cctggattcc cgcctgcgcg ggaatgacgg tttagaagtt gcccgaaacc
       61 tcaaaaaaaa accgaaaccg aacaagccgg attcccgcaa cctttcgtca ttcccgtgaa
      121 aacgggaatc tagaacctca aactttcaga taatctttga atattgccgt cgcccgaagg
      181 tctggattcc cgcctgcgcg ggaatgacga tttggaaatt acccgaaacc caaaaacaac
      241 tgaaaccgaa cagaccggat tcccgcctgc gcggaaatga cgggtctttt atcatcttta
      301 aaggctgccg cgcgccatct cgacggcggt ctccacggca gttatcaggc tgccggaatc
      361 cgccctgccg gttgccgcca aatcgagcgc ggtgccgtga tcgacggagg tgcggataaa
      421 gggcagcccc agtgtgatgt tcacgccctg tccgaagctg tggtatttca acacgggcag
      481 cccttggtcg tggtacatcg ccaatacggc atccgcacct tcgagcataa acggttggaa
      541 caaggtatcc gccggatacg ggccggcgag gtttatccct tcgcggcgca ggttttcgag
      601 cgcggggata atggtgtcgg tttcttcgtg tccgaggtgt cctccttcgc cggcgtgggg
      661 gttgagtccg gcgaccagga ttttgggatt tttgatgccg aatttgtgtt ttaagtcgtg
      721 atgcagaatg cgtgcgacgc tttcaatcag cggttgcgtg atggcggcgg caacgtcttt
      781 cagcggcagg tgggtcgtta cgagggcgac gcgcaggcct ttgccggcaa gcatcatcac
      841 gacctgcccc gtgccgcttt tttccgccag atattcggtg tgtccgctga aaaaacctgt
      901 gcttgcgcgc gcgtcgttga tgatgccttt gtgcagcggc gcggtaacga tgccgtcgaa
      961 aatgccgtct gaaatgcctg cgagcgcggt gtccaaaagt tgcagcacat aggcggcgtt
     1021 ggcgggattg agccgccctg cctcaaccgc ttcggcggca gggatgtgca gcacttccag
     1081 ctcgccgtat gccgcgccgc ctgattccgg atcgaagtcg cgcaagacga cgcttttgcc
     1141 caaggcttcg gcgcgcgcgc gcaacaggtg tttgtcgccc aataccgcgc agcggcaggg
     1201 caggcgtgca aacgccaagt ccaaacaaat atcggggccg atgccggcag gctcgccgga
     1261 agtaacggca aaaacaggct gtttcatcgt gtttgctcca aacaaaatgc gattctaacg
     1321 ccgcagccgc gcggcgatgt aaatttttct gattttgttg acaatctgct agaatgggcg
     1381 tttacaaaat ttaaaccctg cttgcatacc gccaatatgt gcgagtttca actttaagga
     1441 agcgatatga acgagaactt taccgaatgg ctgcacggct gggtcggcgc catcaacgat
     1501 ccgatgtggt catacttggt ttatatgctt ttgggtacgg ggcttttctt caccgtaacc
     1561 acgggctttg tccaattccg cctgttcggg cgcagcatca aagaaatgct cggcggccgc
     1621 aaacaggggg acgaccctca cggcatcacg ccgtttcagg catttgtaac cggccttgcc
     1681 agccgcgtgg gcgtgggcaa tatcgcgggc gtggccatcg ccatcaaagt cggcggaccg
     1741 ggcgcggtgt tttggatgtg ggtaaccgcc ttaatcggta tgagttcggc gtttgtcgaa
     1801 tcttcgctgg cgcagctctt taaagtccgc gactacgaca accaccattt ccggggcggc
     1861 cctgcctact acatcactca agggctgggg cagaaatggc tgggcgtgtt gttcgccctg
     1921 agcctgattt tctgtttcgg ctttgtgttt gaagcggttc agaccaatac cattgccgat
     1981 accgtcaaag cggcgtgggg ttgggagcct cattatgtcg gcgtcgccct ggtgatttta
     2041 accgcgccga ttatcttcgg cggcatcagg cgcatatcta aagcggcgga aatcgtcgtc
     2101 cccctgatgg cggttttgta cctctttatc gcgcttttca tcattttgac caatattccg
     2161 atgattccgg acgtgttcgg tcagattttt tcgggcgcgt tcaaattcga cgcggcagca
     2221 ggcggcttac tcggcggtct gatttcgcaa acgatgatga tgggcatcaa acgcggcctg
     2281 tattccaacg aggcgggtat gggttccgcg ccgaacgccg ccgccgccgc cgaagtgaaa
     2341 caccctgttt cgcaaggtat gattcaaatg ctgggcgtgt ttgtcgatac catcatcgtt
     2401 tgttcttgca ccgccttcat catcttgatt taccaacagc cttacggcga tttgagcggt
     2461 gcggcgctga cgcaggcggc gattgtcagc caagtggggc aatggggcgc gggcttcctc
     2521 gccgtcatcc tgtttatgtt tgccttttcc accgttatcg gcaactatgc ctatgccgag
     2581 tccaacgtcc aattcatcaa aagccattgg ctgattaccg ccgttttccg tatgctggtt
     2641 ttggcgtggg tctatttcgg cgcggttgcc aatgtgcctt tggtctggga tatggcggat
     2701 atggcgatgg gcattatggc gtggatcaac cttgtcgcca tcctgctgct ctcgcccttg
     2761 gcgtttatgc tgctgcgcga ttacaccgcc aagctgaaaa tgggcaaaga ccccgagttc
     2821 aaactttccg aacatccggg cctgaaacgc cgtatcaaat ccgacgtttg gtaaatcccg
     2881 cccttaccag agccgcttcc ccgcgaagcg gcttttccct ttccgcacac tgtaaaaaca
     2941 gggcgaacaa gcgtacaatc ccaacccttt acttttgaat ccatttcgtt tttcagacgg
     3001 catattgaat atagtggttt aacaaaaatc gggacaaggc ggcgaagccg cagacagtac
     3061 agatagtaca gaaccgattc acttggtgct tcagcacctt agagaatcgt tctctttgag
     3121 ctaaggcgag gcaataccgt actggttttt gttaatccac tataaatgcc gtctgaaaca
     3181 ccgtcaggca atacacacat gacccacatg atttacccca aaacctacga cgtgattgtc
     3241 gtcggtggcg gccatgccgg taccgaagcc gcgctcgccg ccgcccgcat gggcgcgcag
     3301 acgcttttgc tcacacacaa tatcgaaacg ctcggacaaa tgtcatgcaa cccttccatc
     3361 ggcggcatcg gcaaagggca tttggtacgc gaactcgacg cgctcggcgg cgcaatggcg
     3421 ttggccaccg acaaatccgg tatccagttc cgccgcctga acgccagcaa aggcgcggca
     3481 gttcgagcca cgcgcgcgca ggccgaccgc attttgtaca aagccgccat ccgcgaaatg
     3541 ttggaaaacc aagaaaacct cgaccttttc caacaagccg tcgaagacgt aacgctcgac
     3601 ggcgaacgca tcagcggcgt aatcaccgcg atgggcgtgg aattcaaagc ccgcgccgtg
     3661 gtgctgaccg caggcacatt tttgtccggc aaaatccata tcggtttgga aaactacgaa
     3721 ggcggccgcg ccggcgaccc cgccgccaaa tcgctgggcg gacgtttgcg cgaattgaag
     3781 ctgccgcaag gccgtctgaa aaccggcacg ccgccgcgca tcgacggacg cacgattgac
     3841 ttttcccaac tgaccgaaca gcccggcgac acacccgttc ccgtcatgtc cgtgcgcggc
     3901 aacgccgaaa tgcacccgcg ccaagagtcc tgctggatta cgcataccaa cacgcaaacc
     3961 cacgacatca tccgctcagg cttcgaccgc agcccgatgt ttaccggcaa aatcgaaggc
     4021 gtgggcccgc gttattgtcc gtctatcgaa gacaaaatca accgtttcgc cgataaagac
     4081 agccaccaga ttttcctaga acccgaaggc ctgactacgt acgaatacta tcctaacggt
     4141 atctccacca gcctgccgtt cgacatccaa atcgcgctcg tccgcagtat gaaaggtttg
     4201 gaaaacgccc atatcctgcg ccccggctac gccatcgaat acgactactt cgacccgcgc
     4261 aacctcaaag ccagcctcga aaccaaaacc attgagggac tgtttttcgc tgggcaaatc
     4321 aacggtacga ccggctacga agaagccgcc gcgcaaggtt tattggcagg cgcgaacgcc
     4381 gtgcaatatg tgcgcggaca agacccgctc ctgctgcgcc gcgaacaagc ctacctcggc
     4441 gtattggtgg acgacctcat caccaaaggc gtgaacgaac cctaccgaat gttcaccagc
     4501 cgcgccgaat accgcctgca actcagggaa gacaacgccg acatgcgcct gaccgaagac
     4561 ggctacaaaa tcggcttggt gggtgaagcg caatggcgca tgttcaacga aaaacgcgaa
     4621 gccatcgagc gcgaaatcca acgtttgaaa acaacgtggt acacgccgca aaaactcgcc
     4681 gaagacgaac aaatccgcgt attcggacaa aaactcaacc gcgaagccaa cctgcacgac
     4741 ctcctgcgcc gcccgaacct cgattacgcc gcgctgatga cgctcgaagg cgcgatgccg
     4801 tctgaacgcc tcgctgccga agtggtcgag caagtcgaaa tccaagtcaa ataccaaggc
     4861 tatatcgacc gccaaaacga agaaatcgac agccgccgcg acatcgaaac cttaaaactg
     4921 cccgacggca tcgattacgg caaagtcaaa ggcttgtcgg cagaagtgca gcaaaagctc
     4981 aaccagcaca aacctgaaac cgtcgggcag gcaagccgca tttccggcgt aacgcctgcc
     5041 gccgtcgcac tgctgatggt gcatttgaag cgcgggttta aagacgcgaa ataaacacat
     5101 cggtacgatg ccgtctgaaa catcgttcag acggcattcc caccatccca acaggaaaca
     5161 tcatgcacat actgaccgcc ggcgtggacg aggccggacg cggaccttta gtcggcagcg
     5221 tgtttgccgc cgccgtcatc cttccggaaa cgtttgacct acccggactg accgactcca
     5281 aaaaactcag cgagaaaaaa cgcgacacgc ttgccgaaat gattaaagat caggcggccg
     5341 cgtggcacgt cgccgccgcc acgcccgaag aaatcgccag cctcaacatc ctgcacgcca
     5401 ccatgctcgc catgaaacgc gccgttgacg gtttggctgt gcgtcccgaa aaaatattca
     5461 tcgacggcaa ccgcattcca gaacatttag gcatccctgc cgaagcagtc gtcaaaggcg
     5521 acagcaaaat catcgaaatc tccgccgcat ccgttttggc aaagaccgca cgcgatgcag
     5581 aaatgtacgc actggcgcaa cgccatcccc aatacggttt cgacaaacac aaaggttacg
     5641 gcacgaagca gcatttggaa gccctcaaac aatacggcgt gctgcccgaa caccgccgcg
     5701 acttcgcccc cgtcagaaac ctgctcgcgc agcagacgct gttttaaacc ggcacaaaaa
     5761 tgccgtctga acttcagacg gcattttcag catcgcaact tcaaagagaa agaacccaaa
     5821 ccgtcattcc tgcgaaaaac agaaaatcaa aagcgtgggc aacaagttgc gtacgctacg
     5881 ctcactgcca agaaacaatt ttaccgtttt caatttttgg taaattatct tgtaacgcac
     5941 aaaaaccaaa acatttttgt gtgaatttcg tcctgaattc tgttaattta tcaatgaact
     6001 cttgttcatt ttcctttgtt tgaaacgaaa attcatcttg taacttttca taatcgaaat
     6061 tacccatttc atcacaatat aatttatcaa attcatctgc tagccaaatg cacaattctt
     6121 tcagatgatt gtctgataaa atttcctgtg gtaataattc ttcacaccaa tcgttttcaa
     6181 taatttcatc attttcatca taaaaccata ctggaaaaca gtgaaattca agtaacaatc
     6241 ttattttttt catttaacta ctcttttggg gttggcacca acaataaacc cattattgcc
     6301 tatatcaata gccacacggt gttttgtgcc gttataggtg aattcatata taggtcttgt
     6361 gcgttgcatt cctacaattt gtccattttt aaccgcagtc atcaaataat taggaatttc
     6421 agataaagaa acctaaaatc cgtcattccc gtgaaaacgg gaatccagtc cgtccggttt
     6481 ccgttttttt ttgaatttcg ggaaacttcc aaaccgtcat tcccacaaaa acaaaaaatc
     6541 aaaaactgaa atttcgtcat tcccgcgcag gcgggaatct agaaacccaa agctgcaaga
     6601 atttatcaaa aatgactgaa actcaaaaaa ccggattccc gcgaaaacag gaatccggag
     6661 tctcagggtt ggaaaaaccg tttttcccga taagtttccg taccgacaga cctagattcc
     6721 cgcccgcgcg ggaatgacga tatttcagtt ttgtgttttt gatttttttg tttttgcggg
     6781 aatga
//
LOCUS       DAWGBY010000101         6662 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.101, whole genome shotgun sequence.
ACCESSION   DAWGBY010000101 DAWGBY010000000
VERSION     DAWGBY010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6662
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.101"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(72..710)
                     /locus_tag="WHG62_001645"
     CDS             complement(72..710)
                     /locus_tag="WHG62_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ1725729.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYEKSCIETADEVRIVADGDVVAFCENMERK
                     IRAHHYYLSPCEQNGAMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
     gene            complement(707..1078)
                     /locus_tag="WHG62_001646"
     CDS             complement(707..1078)
                     /locus_tag="WHG62_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ1725730.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(1347..1769)
                     /gene="queD"
                     /locus_tag="WHG62_001647"
     CDS             complement(1347..1769)
                     /gene="queD"
                     /locus_tag="WHG62_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ1725731.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGIIKGG
                     AKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(1776..2294)
                     /locus_tag="WHG62_001648"
     CDS             complement(1776..2294)
                     /locus_tag="WHG62_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ1725732.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTKMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            complement(2322..2981)
                     /gene="queC"
                     /locus_tag="WHG62_001649"
     CDS             complement(2322..2981)
                     /gene="queC"
                     /locus_tag="WHG62_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ1725733.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERASWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            3086..3511
                     /locus_tag="WHG62_001650"
     CDS             3086..3511
                     /locus_tag="WHG62_001650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725734.1"
                     /translation="MPSEHAAYADLTASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSECGIAGAAVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAVQAFVPDGKIGYNIGHQCPTY"
     gene            3526..4746
                     /locus_tag="WHG62_001651"
     CDS             3526..4746
                     /locus_tag="WHG62_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ1725735.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGQFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKRQ"
     gene            complement(4773..5054)
                     /locus_tag="WHG62_001652"
     CDS             complement(4773..5054)
                     /locus_tag="WHG62_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ1725736.1"
                     /translation="MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(5133..5267)
                     /locus_tag="WHG62_001653"
                     /pseudo
     CDS             complement(5133..5267)
                     /locus_tag="WHG62_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5266..5724)
                     /locus_tag="WHG62_001654"
     CDS             complement(5266..5724)
                     /locus_tag="WHG62_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725737.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(6288..6491)
                     /locus_tag="WHG62_001655"
     CDS             complement(6288..6491)
                     /locus_tag="WHG62_001655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725738.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSKPKEGAK"
BASE COUNT         1571 a         1555 c         1685 g         1851 t
ORIGIN      
        1 gcgacacact ttccccgtat gtcaaacatc ggtaaaaccg tacgccgtcc ctttgagtta
       61 cactgcttaa actactctat tcccgcccat ttgtgcgtct gcacgctcaa ctgccaatgc
      121 accggcgcgt cggggcggct gttcagaata ccgatttggc ggatggtgtc gtagatgttc
      181 attgcaccgt tttgttcgca gggcgaaagg tagtaatgat gcgcacggat tttgcgttcc
      241 atattttcac agaacgcaac gacatcgccg tcggcaacaa tccgcacttc gtcggctgtt
      301 tcgatacagc ttttttcgta tttggcggca tagcaggctt tggggctggt ggcgacatag
      361 tcgatttgcg gcggcgcggg attgagtccg ttggtttcga tacagaggaa atagccttcc
      421 gccttgagca tgtccagcag catatcgaga tgcggctgga tggtcggttc gccgccggtg
      481 atgatgatgt tgcgggcggc ataggttttc agacagccta agatgtcgga caggctcatc
      541 atgccgaatg tcaaataatc ggtatcacac cagccgcagg cgaggttgca tttgcccaag
      601 cggacgaaaa cggcgggcat gcccgtgttc cagccttcgc cttgcaggct ttcaaagatt
      661 tcgacgatgc ggtattgggg attttcgggg gcaacattga tttttttcat accgccaaca
      721 ccgccgccgc tgccaaaaat gcgggcaaac cttgtttgac gagtatgcct ttgttgccgg
      781 aagagaacgc gccccacgcg gcggcaatca ggacgaagcc gagaaacagt accgttgcgc
      841 cgtacaccgc gttatccgga gcggcaaagc gcgaccacac cagcccgatg ccgagaaagc
      901 cgttatacag cccttggttg ccgaacaggg tctgcacgcg cttttgttcc ataaattcat
      961 aaggcagctt gaatatttcc gccgcttttt cgctgggaat ctgcgtcatt tcaagccagg
     1021 cgatgtagaa atgttcggcg gtgacaagga ggactaagag ggtggagaga agtttcatgg
     1081 gtattccttt taatgggtgt atttgatatg gagggtcgtc tgaaaaaacg gggaatccgt
     1141 acaggagaaa aaaccgtttt acggtaaatt caaataagga cgctctaaac cgtcctttcc
     1201 gcgcaggcgg gaatccaaag atttggaatt gctgcaattt ttaaatattc ctgaaaaacc
     1261 aaggtctgga ttcccgcctg cgcgggaatg acgcggttgg gcatgtctta ttggaattta
     1321 ctatatcgat acgttcaaga tattccctac tccccttcat actccgcaca cgatgtcggc
     1381 gtttcccaca atttgacgcg gcacacgttc agccccgcgt ttttcagacg gtcgtacatt
     1441 tcgaccgcca tattttcggc agtggtgcgg cagggcaggc gcagggtttt catgttccag
     1501 ccttccaaga gtgcggcgat ttgagattcg cgcccgttgc cgccgtggta gatgaaggcg
     1561 tggtcgaagg ggtcggtaat gtgttgtttg acaatggctt tcaagtcggt aaagtccatc
     1621 accataccgt ctttcgcgcc gcctttgata atgccgtctg aaacggtgat ttcgagtttg
     1681 taggtatgtc cgtgcaggtt ttggcatttg ccgtcatgcc cgtcgagcat atgcgaggag
     1741 tcgaaggtga agattttggt gattttcatg ggttctcaaa tgggcaaata gccttgaaag
     1801 ccgatttcgg cgggtttgcc gtgcggattc ggggtcaggc ggatatggaa attgccgatg
     1861 cggtcgagcg caagcaggtt gtccacgtct tttaagttgt ctttatgttg ctgaacatag
     1921 ctgtcggtca acagggtttg cagggctttt tgtttggctt cggcaggcgt ggcggcggcg
     1981 aacagcccaa aagcgtgcgc ttcggcgagc tgccctgcgc gataaccgcc gacattggcg
     2041 aaatacaggc gcggggcgtg ttcagacggc attttcgttt tgggcgtttc ggatacggcg
     2101 atgtcgtaac cgtccgccca ttcgacaacc tgccagccgt cgatgtggat tttgtccgca
     2161 tcgccgaacc acgcggcttt gagtgcgggg acggcttcac ggtagtcgtc gcacacggca
     2221 aattggatgt cgtgcacttc gatattcgac ctgccggcat tgccgccgag gtaaaacata
     2281 tggagcttgg gcatatcgta ttccttatgg tttgcgcgtg ttcagacggc ctttttactt
     2341 tccagatatt ccgccagccc gcgttcgcgc aagatacagc tcgggcattc gcggcagccg
     2401 ccgacgatgc cgttatagca ggtgtgggtt tgctcgcgga tatagtccag cgcgcccatt
     2461 tcgtccgcca acgcccaagt ttgcgccttg gtcagataca tcagcggcgt gtggatttgg
     2521 aaatcatagt ccatcgccag attaagggta acgttcatgg atttgacgaa cacgtcgcgg
     2581 cagtcaggat agccggagaa gtcggtttcg cacacgcccg cgatgatgtg ccgtatcccc
     2641 tgccctttgg cgtaaatcgc ggcatagagc aggaaaagcg cgttgcggcc gtctacaaag
     2701 gtattcggaa cgccgttttc ggcagtttcg atggcggcgg tgtcgtccat cagggcattg
     2761 tgcgtaatct gccgcatcag gctcaagtcg agtacggttt gtttgacgcc caaatcctgc
     2821 gcaatccagc tggcacgttc cagctcgacg gcatggcgtt gcccgtattg gaaagtaatg
     2881 gcttggacgt tttcgcgccc gtagatttgg attgcctgaa tcaggcaggt ggtcgaatcc
     2941 tgaccgcccg aaaagatgac caaggctttt tggtttgaca tatcgaatcc tagttttggt
     3001 aacgcgggag gtttgcgaac cgcgaagttg gacagtaaag acgcggatta tacaggcaaa
     3061 cgcgttcaga cggcatctga acgccatgcc gtctgaacac gcggcttatg ccgacttgac
     3121 ggcgagttcc gccaagcgtt tgctttgtgc gaaggcgata ttgttttctt cggcggtcag
     3181 gacgggagcc gctgtcggga atatcttttt tgacggcttc gcagacggcg gagactttgg
     3241 ggacggtgcg caatacggct tcgcaacctt caacgctgtc gatgccgcga gcgattcgga
     3301 gtgcgggatt gcgggtgctg ccgttttgga aatagtagag gacgaggatt ttgaggggga
     3361 tttgggttca tgggcggatt ccgttaaaat ggttcggtct tcagacggca taacagttgt
     3421 tccgatgccg tctgaaacag ccgcagttca ggcatttgtt cctgacggca aaattggcta
     3481 taacatcggg catcaatgcc caacttactg accgggcaag aaattatgac ctttttacaa
     3541 cgtttgcaag gtttggcaga caataaaatc tgtgcgtttg catggttcgt cgtccgccgc
     3601 tttgatgaag aacgcgtacc gcaggcggcg gcaagcatga cgtttacgac gctgctggca
     3661 ctcgtccccg tgctgaccgt gatggtggcg gtcgcttcga ttttccccgt gttcgaccgc
     3721 tggtcggatt cgttcgtctc cttcgtcaac caaaccattg tgccgcaggg cgcggacatg
     3781 gtgttcgact atatcaatgc gttccgcgag caggcgaacc ggctgacggc aatcggcagc
     3841 gtgatgctgg tcgttacctc gctgatgctg attcggacga tagacaatac gttcaaccgc
     3901 atctggcggg tcaattccca gcgtccgtgg atgatgcagt ttctcgtcta ttgggcttta
     3961 ctgacgttcg ggccgctgtc tttgggcgtg ggcatttcct ttatggtcgg ctcggtacag
     4021 gatgccgcgc ttgcctcagg tgcgccgcag tggtcgggcg cgttgcgaac ggcggcgacg
     4081 ctgaccttca tgacgctttt gctgtggggg ctgtaccgct tcgtgccaaa ccgcttcgtt
     4141 cccgcgcggc aggcgtttgt cggggctttg gcaacagcgt tttgtctgga aaccgcgcgc
     4201 tccctcttca cttggtatat gggcaatttc gacggctacc gctcgattta cggcgcgttt
     4261 gccgccgtgc cgttttttct gttgtggctg aacctgttgt ggacgctggt cttgggcggc
     4321 gcggtgctga cttcttcact ctcctactgg cagggagaag cgttccgcag gggcttcgac
     4381 tcgcgcggac agtttgacga cgtgttgaaa atcctgctgc ttctggatgc ggcgcaaaaa
     4441 gaaggcaaag ccttgcctgt tcaggagttc agacggcata tcaatatggg ctacgacgag
     4501 ttgggcgagc ttttggaaaa gctggcgcgg cacggctaca tctattccgg cagacagggt
     4561 tgggtgttga aaacgggggc ggattcgatt gagttgaacg aactcttcaa gctcttcgtt
     4621 taccgtccgt tgcctgtgga aagggatcat gtgaaccaag ctgtcgatgc ggtaatgaca
     4681 ccgtgtttgc agactttgaa catgacgctg gcagagtttg acgctcaggc gaaaaaacgg
     4741 cagtagtctt gagtattttt gaaactgtat ttttatccta aagacatttt cctatctgct
     4801 gattccaccg tttcctttct gtgtgccgcc ataattttta tgatagacaa gccattcaag
     4861 tttgcattga ctgctttttc attggcaata tccaaatggc tggtcgctgc atctaaaaat
     4921 aggattttcg gttcgcaata taaggcccgc gccaatacga tgcgttgttt ttgtccgcct
     4981 gacagtgcgc tgcccatatc gccgatcaag gtttcatagc ccataggcat ggcggagatt
     5041 tcttcgtgaa tcatagcaag gcaggcgcaa tgttcgattt ttcctctatc cggttccgta
     5101 tcgaaaaaac aaggggctgt actagattag ccctaaatcc cacaccaatc ccgcaggatt
     5161 ttaagctgtt gagacggtgt gccgaagtta aatcgaaatt cgcattcttt caagaacagc
     5221 gggaaagatt tgcaatcgat tccgttgtat tttcgcaaga cacgtttagt ctagagtctg
     5281 tatattacat ttatttttag ggtctgctag ccaatttctt gttcccttca ttattttatc
     5341 ttctgaaaga aaattatttt tttccatgct attaatatta atgatatgat ttttatttaa
     5401 aataattttt ccatataaaa tttccggttt gtaatagcaa gagtctgaag caaatccttg
     5461 cccgtcaata taagaaaaat aaatgttatc atcctcctta taatattcta aaaccaatcc
     5521 ggatattatt ttatcaaaat tcccttcatt tccatctttc atgactaaaa tataattagc
     5581 aggccaacct ttatcgtaaa catattcaaa ctgatagttc ccgaaactct cgatatccga
     5641 actaaaaaag aagaaaagca aattaatagc caatacaaaa acaaataaga acaaaaatag
     5701 caaaattttc aacttagtta acaatattta cctctccttt aaattcaatc ctgaaaggta
     5761 ccccttaccc tgggctacca attatagttt ccatatttct aaatattgtt tttacattac
     5821 ttttttctcc ccccaaagga atgcatttta aaatcatgct tttcaggtgc taatcgatac
     5881 ttaccattaa catctttaat cacagatata tttccatgta tagcccaacg tgaaaaatct
     5941 gagtattata tacagttata ccttactgaa acaaagctag ctgtacatat ctgtaccata
     6001 tttttactaa aaacaaaaaa tatttataat tattaaggat aagataaaaa cccccaacgc
     6061 cagattaatt cttaataatt tcaaataaaa aatatttgag attttttatt ttccaaataa
     6121 tatattgaaa tatttaaagt taaggtagct tgatttaatt agaaaatcaa aaaaaccatt
     6181 aattaatttt tcttctttaa atattttata tgatattata aaattaaata acattgcgaa
     6241 aacatatgaa atcatcaaaa taccaaatat atagtgggaa tgcattatta tttagctcct
     6301 tcttttggct ttgacaaatt gacagtccat tgatatccaa tgcttgcatt tgcaattgct
     6361 gacgcacctg cccctgtttt ccctgttagt atcaatggtt cttttcttgc aagatgtgca
     6421 cctgcacaac cacctaatac taaaccacca cctattgtaa atccttcctg ttgtatctct
     6481 aatgataaca ttttcttctt gtgccgccct taatacagat tgtggaattg gattgacctg
     6541 agcaggaact tctaaaataa gttttccttc aagctgtctt cctcttagcg aagcaggtgt
     6601 acttggaaca ttggaaatga caaagtgagt gcgcaaagcc acctgaaggc gatgtgtttg
     6661 aa
//
LOCUS       DAWGBY010000102         6536 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.102, whole genome shotgun sequence.
ACCESSION   DAWGBY010000102 DAWGBY010000000
VERSION     DAWGBY010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6536
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.102"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            146..1981
                     /gene="edd"
                     /locus_tag="WHG62_001656"
     CDS             146..1981
                     /gene="edd"
                     /locus_tag="WHG62_001656"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ1725739.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGRGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLSAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVTGELNVLIDEAE
                     WNAREVEHIDLGANQQGCGRELFAGFRSLTGGAETGAMSFGGEFA"
     gene            2089..2727
                     /locus_tag="WHG62_001657"
     CDS             2089..2727
                     /locus_tag="WHG62_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ1725740.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAD
                     HNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPEYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(2983..4024)
                     /locus_tag="WHG62_001658"
                     /pseudo
     CDS             complement(2983..4024)
                     /locus_tag="WHG62_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            4187..5227
                     /gene="mutY"
                     /locus_tag="WHG62_001659"
     CDS             4187..5227
                     /gene="mutY"
                     /locus_tag="WHG62_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ1725741.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            5644..6204
                     /locus_tag="WHG62_001660"
     CDS             5644..6204
                     /locus_tag="WHG62_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ1725742.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
BASE COUNT         1685 a         1850 c         1554 g         1447 t
ORIGIN      
        1 ttaatccact atagtgaggt tttcagacga ccccttgtaa ggtttgaaag gtcgtctgaa
       61 acgccaaatg ccccacaccc aatacaaaaa atcagaaacg cgcaaacaaa atccccatac
      121 cccccgttcc gacaggagac cgaccgtgaa cactactcct atccactcca aactcgccga
      181 aatcaccggg cgcattatcg aacgcagccg tccgacgcgt gaaaaatatc tggcgaaaat
      241 ccgcagcgcc aaacaaatgg gacgcttgga gcgcaaccaa ctcggctgca gcaatttggc
      301 gcacggctat gccgccatgc ctaaaagcat caaaatcgaa atgcttcagg aaactgtccc
      361 caacttaggc atcatcaccg cctacaacga catggtttcc gcacaccagc cgtttaaaga
      421 cttccctgac caaatcaaag acgaagcgca gaaaaacggc gcgaccgccc aagtcgccgg
      481 cggcacaccc gccatgtgcg acggcatcac tcaaggctac gccggtatgg aactgtcgct
      541 gttctcccgc gacgtgattg ccatgagtac cgccgtcggg ctgtcgcatc aaatgtttga
      601 cggcagcctg tttatgggcg tatgcgacaa aatcgttcca ggtttgatga taggcgcgct
      661 ttcgttcggt catattccgg gtatcttcgt ccccgcaggc ccgatgtcca gcggtatcgg
      721 caacaaagaa aaagcccgca cccgccagct tttcgccgaa ggcaaggtcg gacgcaacga
      781 acttttgaaa agcgaaatgg gttcttacca cagcccgggc acctgcactt tctacggcac
      841 ggcaaactcc aaccaaatga tgatggaaat gatgggcgtg cacctgcctg ccgccgcctt
      901 cgtccaccct tacaccgacc tgcgcgaagc gctgacccgc tacgccgccg gacacctcgc
      961 gcgcggcatc aaaaacggca cgattaaacc tttgggcgaa atgttgaccg aaaaatcctt
     1021 tatcaacgcc ttgattggcc tgatggcaac cggcggttcg accaaccaca ccatgcacct
     1081 cgtcgccatg gcacgcgccg ccggcgtgat tttgaactgg gacgacttcg acgaaatttc
     1141 ctccatcatc ccgctgctca ttcgcgttta tccgaacggc aaggccgacg tgaaccactt
     1201 taccgcagcg ggcggactgc ctttcgttat ccgcgaattg ctgaatgcag gcctgttgca
     1261 cgacgatgtc gataccgtcg tcggacgcgg tatgcgccac tacaccaaag agcctttcct
     1321 catcgacggc aaactcgaat ggcgcgaagc ccccgaaacc agcggcaacg acgacatcct
     1381 gcgcaaagcc gataacccgt tctccccaga cggcggtctg cgcctgatga aaggcaacat
     1441 cggtcgcggc gtgattaaag tgtccgccgt gcgcgaaggc tgccgcatca tcgaagcacc
     1501 tgccatcgtg ttcaacgacc aacgcgaagt attgtccgca tttgaacgcg gcgagttgga
     1561 acgcgatttc gtctgcgtcg tccgctacca aggcccgcgc gccaacggta tgcctgaatt
     1621 gcacaaactg accccgcctc tgggcatcct gcaagaccgc ggcttcaaag tggcgttgct
     1681 gaccgacggc cgtatgtccg gcgcgtccgg caaagtgccc gcatccatcc atatgacccc
     1741 cgaagccctg atgggcggca acatcgccaa aatccgtacc ggcgacctga tccgcttcga
     1801 ttccgtgacc ggcgaactca acgtcctgat tgacgaagcc gaatggaatg cccgcgaagt
     1861 cgaacacatc gacttgggcg cgaaccaaca aggctgcggc cgcgaactct tcgccggctt
     1921 ccgcagtttg accggcggcg cggaaaccgg cgcgatgagc ttcggcggcg aatttgcctg
     1981 atgcgcgttt cagacggcct tcgtgaatag aaggtcgtct gaaaaattaa atccccatcc
     2041 cgtttgaccg cagcaaaaac aacaccccat tccacccgga gaaccgaaat gtccaaactg
     2101 accccccgcg aaattttgac cgccggcgca gttgtgccgg taatggcgat tgacgactta
     2161 agcaccgccg tcgatttgtc ccacgccctt gtcgaaggcg gcatccccac cctcgaaatc
     2221 accctgcgca cccctgtcgg cctcgatgcc atccgcctga ttgccaaaga agtgcccaac
     2281 gccatcgtcg gcgctggtac ggttaccaac cctgaacagc tcaaagccgt cgaagacgca
     2341 ggcgcggttt tcgccatcag cccgggtttg cacgaatccc tcgccaaagc cgaccacaac
     2401 agcggcatcc ccctgattcc cggtgttgcc accccgggcg aaatccaact ggctttggaa
     2461 cacggcatcg acaccctcaa actcttcccc gccgaagtcg tcggcggcaa agccatgctc
     2521 aaagcccttt acggccctta cgccgatgtt cgcttctgcc caaccggcgg catcagcctg
     2581 gcaactgccc ccgaatacct ggcactgccc aacgtcctgt gcgtcggcgg ctcttggctg
     2641 acaccgaaag aagccgtgaa aaacaaagac tgggacacca tcacccgcct cgccaaagaa
     2701 gcggcggcat tgaaacccaa agcctgaacc gcatcgtaaa aatgccgtct gaaaaacctt
     2761 tcccgtttca gacggcattt tgtcgattga gggcacagtc ggcatacacg gcagcactga
     2821 tcagacatac cgcccctaaa atgcccatcc gccttccgca taataaaaat aacggtcagt
     2881 tcattcgaca gcagccggac agcccactac acggctgaaa aaatgccgtc tgaaacgcat
     2941 tcagacggca tccgcttaaa aaaacaactg attcaacgcc gattaatccg cttccaaaac
     3001 cactttcatc gcttggtttt cggcggcgtg tttgaacacg tcgtaggctt tttccaattc
     3061 gctgaatttg aaacggtggg tcaacatttt ggtgtaatcg acggagctgc tggaaattgc
     3121 cttcatcagc atttcggtgg tattggcgtt taccaggccg gtagtgatgg caagcttttt
     3181 aatccacagt ttttccagtt tgaaatcaac ggattgaccg tgtacgccga caacggcgat
     3241 atggccgccg ggtttcacga tgtcttggca catattccaa gttgcaggga taccgaccgc
     3301 ttcgatggca caatctacgc cgtcttcacc gacgatggcg aaaacttgtt tggagacgtc
     3361 gccggaagcg gggctgatgg tatgggtcgc gcccaactct ttcgccagtt tcaaacggtt
     3421 ttcgtccata tcgcacacga taatggcggc ggggctatac agttgggcgg tcaacaaggc
     3481 ggacataccg acaggagcgg cacctgcgat gaatacggtg tcgccgggtt tgacatcgcc
     3541 gtattgcacg ccgatttcgt gtgcggtcgg caaagcgtcg ctcaacaaca gggcgacttc
     3601 ttcgttgacg ttgtcgggca gcggcacgag gctgttgtcg gcataaggcg tgcggacgta
     3661 ttctgcctgc gtgccgtcaa tcatgtagcc caaaatccag ccgccgttgc ggcaatgcga
     3721 ataaagttgg attttgcagt tgtcgcaagt acagcatttg ctgacgcatg aaataatgac
     3781 tttatcgccg actttgatgt tttttacagc ctcgccgact tcttctacaa taccgatgcc
     3841 ttcatgaccg agaatacgac cgtcggcgac ttcgggtttt tttgcctttc caaataccca
     3901 aatcggtacc gcaaatcgtg gttttgacga ttttcaccac cgcatcggtc ggatcgataa
     3961 tctgcggacg gggtttttct tcaaaacgga tgtcgtttgc gccgtgataa accattgctt
     4021 tcatgctgat actccttgct tgttgataaa taatttcaat accgcaataa agtttcttta
     4081 tatgagttat atgcccctac aaaaaataag tcaataagaa ttattttcac aatgttatac
     4141 aataacatac tgttttaaat ataaataaaa ccaccgattg atattaatga acacacccat
     4201 ccccttctcc gaacggctca tccgctggca aaaacaacac ggtcgccacc acctcccttg
     4261 gcaggtcaaa aacccttatt gcgtctggct ttccgaaatc atgctccagc aaacgcaggt
     4321 cgccaccgtg ttggactact atccgcgttt cttagaaaaa ttcccgaccg ttcagacgct
     4381 tgccgccgcg ccgcaagacg aagtgttgtc gttgtgggcg ggcttgggct attacagccg
     4441 cgcgcgcaac ctgcacaaag ccgcgcaaca agtcgtcagg caattcggcg gcacgtttcc
     4501 gtcggagcgc aaagacttgg aaaccctctg cggcgtaggc agaagcaccg ccgccgccat
     4561 ttctgccttc tccttcaacc gccgcgaaac cattttggac ggcaacgtca aacgcgtact
     4621 ctgccgcgtg ttcgcccgcg acggcaatcc gcaggacaaa aaatttgaaa actcgctctg
     4681 gacacttgcc gaaagcctgc tgccgtctga aaacgccgat atgcctgcct atacacaagg
     4741 tttgatggat ttgggcgcga ccgtgtgcaa acggacgaaa cccttgtgcc accaatgccc
     4801 gatggcggac atctgcgaag caaaaaagca aaaccgcacc gccgagctgc cgcgcaaaaa
     4861 aaccgccgcc gaagtaccga ccctgccgct ttactggctg attgtccgca accgggacgg
     4921 cgcgattttg ctggaaaaac gccccgccaa aggcatttgg ggcgggctgt attgcgtgcc
     4981 gtgttttgaa agtttgaacg ggctttccga ctttgccgcc aaattctccc tgaccatggc
     5041 agatatggac gaacaaaccg ccctgaccca ccgtctgacg caccggctgc tgatgattac
     5101 gccgtttgaa ggacaaatgc cgtctgaaag cccttcagac ggcatttgga taaagccggc
     5161 gcatttgaaa gattacggcc tgcccaagcc tttggaaatt tatttaaacg gtaataggtt
     5221 agaataaaca aaataaaccc attgaactgt tgtttgcagg tatcgcagca agaacaaccg
     5281 atgaatttgg gtcgtatttt aggcggcggg ataatgttca aatgggacat ttggaacgga
     5341 agaagtcggc aatttaaaaa ggatttaaaa agcaaagaag gtcaaaaaca tgaacacaaa
     5401 cttaaatgac aaagacaaag ccatggatac cgcaatcagg tttcagaaaa ggatgaggat
     5461 tccgaaattt ttctttttaa ttctctgaat cacaatggtt ttggcattta tccaagacgt
     5521 gataacgggt tctaattttc tgcaaataac aattaatgta aaattttcgt aaaaatttat
     5581 cggcttttaa aacaaaattg actaaaatag tcgcgagttt ttactgcaat aaaggagatt
     5641 gcaatgaata tgaaaacctt attagcacta gcggttagtg cagtatgttc agttggtgtt
     5701 gcgcaagcac acgagcataa tacgatacct aaaggtgctt ctattgaagt gaaagtgcaa
     5761 caacttgatc cagtaaacgg taacaaagat gtgggtacag tgactattac tgaatctaac
     5821 tatggtcttg tgtttacccc tgatttacaa ggattaagcg aaggcttaca tggtttccac
     5881 atccatgaaa acccaagctg tgagccaaaa gaaaaagaag gtaaattgac agctggttta
     5941 ggcgcaggcg gtcactggga tcctaaaggt gcaaaacaac atggttaccc atggcaagat
     6001 gatgcacact taggtgattt acctgcatta actgtattgc atgatggcac agcaacaaat
     6061 cctgttttag caccacgtct taaacattta gatgatgttc gcggtcactc tattatgatc
     6121 cacacgggtg gtgataatca ctccgatcat ccagctccac ttggcggtgg cggcccacgt
     6181 atggcatgtg gcgtgattaa ataattcgat tgttcgaaac gaaaagtgcg gtaaattttg
     6241 accgcacttt tttgctagat atttagcatt taattcacga cttcagcagt atagtgaatt
     6301 aaatttaaac cagtacagcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg
     6361 ctgaagcacc aagtgaatcg attccgtact atttgagacc tttgcaaaat tcccttccct
     6421 cccgacagcc gaaacccaaa cacaggtttt cgtctatttt cgctcctaat tactcctaat
     6481 tctacccaaa taccccctta atcctccccg gatacccgat aatcaggcat ccgggc
//
LOCUS       DAWGBY010000103         6494 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.103, whole genome shotgun sequence.
ACCESSION   DAWGBY010000103 DAWGBY010000000
VERSION     DAWGBY010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6494
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.103"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            47..451
                     /locus_tag="WHG62_001661"
     CDS             47..451
                     /locus_tag="WHG62_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ1725743.1"
                     /translation="MTAQPCPICTAQDEDILLQTPNLRVIAIHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
     gene            491..1675
                     /locus_tag="WHG62_001662"
     CDS             491..1675
                     /locus_tag="WHG62_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ1725744.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNVGFTVTNQQAGSRRF
                     QRFAGTDTQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNGGYAVAFGGYPTLDASALTLDTLLPPPDLPFFPESGVADI
                     SE"
     gene            complement(1777..4032)
                     /locus_tag="WHG62_001663"
     CDS             complement(1777..4032)
                     /locus_tag="WHG62_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ1725745.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRVKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPKLQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPGEVFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            4403..5563
                     /gene="nirK"
                     /locus_tag="WHG62_001664"
     CDS             4403..5563
                     /gene="nirK"
                     /locus_tag="WHG62_001664"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
                     /protein_id="HEZ1725746.1"
                     /translation="MKRQALAAMIASLFALAACGGEPAAQAPAASAEAASSAAQAAAE
                     TPAGELPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGD
                     VPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTSTFSFK
                     ALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKGKKGA
                     QGLQPFDMDKAVAEQPEYVVFNGHVGSIAGDNALKAKAGETVRMYVGNGGPNLVSSFH
                     VIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRAFNKG
                     ALGQLKVEGAENPEIMTQKLSDTAYAGNGAAPAASAPAASAPAASASEKSVY"
     gene            5688..6443
                     /locus_tag="WHG62_001665"
     CDS             5688..6443
                     /locus_tag="WHG62_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ1725747.1"
                     /translation="MKYVRLFFLGAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
BASE COUNT         1651 a         1827 c         1617 g         1399 t
ORIGIN      
        1 agaaattatc ctaccgtttt ttaaacactt tcaggaataa ggaaaaatga ccgcccaacc
       61 ctgccccatc tgcacggcac aagatgaaga tattttgctg caaaccccca acctccgcgt
      121 catcgccatc cataacgaca gcggttcgcc tgcattctgc cgcgtcattt ggcgtaagca
      181 catcgccgaa atgaccgacc tttcggcagc ggaacgcggc gaattgatgg aaatggtgta
      241 caaagtcgaa gccgctatgc gccaagtgtt ccggccggca aaaatcaacc tcgccagctt
      301 gggcaatgtc gtgccgcacc tgcattggca tattatcgcc cgctttgaaa acgatgcgtc
      361 tttccccgcg ccgatttggg caaaccccgt ccggaaacac ggtatgaccc tgccgcaaga
      421 ttggacggaa cagcttaaaa agctgcttta agcccgccaa tgccgtctga aaccgtatga
      481 aagggaaatt atgaccgaac cgacctcccg ccgccgtttt ctgaaaacct gcaccgccgc
      541 tgccggcgcg gggctgcttc aggcttgcgg cacatccgcc acatccgttc cgccccttcc
      601 ctcttcccat tccgttgtga aagcccgaac cgtgcctctc caaacgccac gccgtcaaag
      661 ttcggacggc aaccttctgc gcgttgtcgc ttcgtcagga tttgccgaag acaccaaccg
      721 cgtcaacaca gccttaaccc gcctttacaa tgtcggtttt accgtaacca accaacaggc
      781 gggcagccgc cgtttccaac ggtttgccgg cacggacacg caacgtgccg ccgatttcca
      841 agaggtcgct tccggccgcg tcgccacgcc taaagtgctg atgggcttgc gcggcggtta
      901 cggtgcggcg cggattctgc cgcatatcga ttttgcttcg ctcggcgcaa ggatgcgcga
      961 acacggcacg ctgtttttcg gattcagcga cgtatgcgcc gtccagctgg cattgttggc
     1021 aaaaggcaat atgatgagtt ttgccggccc gatggcttat agcgattttg gcaaacccgc
     1081 ccccggtgcg tttacgatgg atgcctttat caagggtgca acccaaaacc gcctgaccgt
     1141 tgatgttcct tatatccaac gcgccgatgt cgaaaccgaa ggcatattgt ggggcggcaa
     1201 cttaagcgtc ctcgcctcgc tcgccggcac gccttatatg cccgacatcg acggcggcat
     1261 tttgttcctc gaagatgtcg gcgaacagcc ctaccgcatc gaacgtatgc tcaatacgct
     1321 gtatctttcg ggtattttga agaaacagcg cgccatcgtg ttcggcaatt tccgtatgga
     1381 aaaaattcga gatgtctatg atccgtctta tgatttttct gccgttgcca accatgtttc
     1441 gcgcacggcg aaaatccccg tgctgacggg cttcccgttc ggacacattg ccgacaaaat
     1501 cactttccct ctaggcgcgc acgcccgaat ccgtatgaat ggaaacggcg gttatgcggt
     1561 cgcgtttgga ggctacccga cactcgatgc gtccgccctg actttggata ccctgctccc
     1621 accgccggat ttgcccttct tccccgaaag cggtgttgcc gatatctcgg aataaacccg
     1681 caaacggaca aatgccgtct gaagccttca gacggcattt tcctgtaaaa aaaccgcacc
     1741 tgatggcagg tgcggtttcc attttcgggc tgaaacttat ttgtcccggc cgaatacgat
     1801 tttggtagct tggatagcaa cgcagattgc accgccgatg aagatcaagt cagcagctgt
     1861 acgaacccaa cgcagggtgt cgagaatttc catttgcagg aattcttcgc tgcgggcata
     1921 ccacaggccg tgcgtgatag aggcgtatgc ctgaatcgcg ccgacaggca gcaggctgat
     1981 ggcaatcata ccgaccaagc caccgttgag cagccagaag ccccaagtca tcagtttgtc
     2041 gtcaaactgc gcgttcggtt tcaaataacg ggcaaccagc aatacgaagc ccaatgccaa
     2101 gaaaccgtac acaccgaaca aggcggcgtg cgcgtgaacg gcagaagtgt tcaaaccttg
     2161 gatatagaac agggaaatcg gcggattgat caggaagccg aatacgccgg caccgatcat
     2221 attccaaaag gcgactgcca cgaagcacat cagcggccaa cgcaggcgtt tcgcccagtc
     2281 ggacaggtgt tggtaagacc agtgttcgta tgcttcacgg cccagcaaca ccagcggcac
     2341 gacttccaaa gcggagaagc aggcaccgat tgccatagag gcggaggtag agccggagaa
     2401 gtacagatgg tgcagcgtac ccggaacgcc gcccaacata aagatggcgg cagcggccag
     2461 agtggaggca gtggcggtac tgcggcggac aaagcccata ttgtagaaga caaaggcaaa
     2521 ggcggcagtg gcaaatactt caaagaagcc ttccacccac aggtgaacca cccaccaacg
     2581 ccagtattcc atgacggcaa tcggggattt ttcaccgtag aacaggcccg gcgcgtagaa
     2641 cacacccacg ccgaccatag aagcgacaaa gatagccaac aggtttttgt ccacgccttt
     2701 ttctttaaag gcggaaaccg tgcaacgcaa catcaggaac agccacaaca gcagaccgac
     2761 catcaaaagg agttgccaga aacgtcccaa atcgaggtat tcgtaacctt ggtgtccgaa
     2821 ccagaagtta aattccgggg gaaggatgtg cgtcaacgcg aagaagttgc ctgcgtaaga
     2881 accgccaacc acaatgaaga gggcgatata gagaaagttt acgccggcac gttggaactt
     2941 gggatcttta ccgccgttga caatcggcgc gaggaacaaa cctgccgtca aaaagccggt
     3001 tgcaatccag aagatggcgg attggatgtg ccaagtacgg gtcagggcat agggaaacca
     3061 gtcggacatt tcaaagccca acgcctcatc gatgccgtag aaaccttgac cttcgacggt
     3121 gtagtgcgcg gtcagaccgc ccagcaatac ttgtaccaca aacagggcaa ctgtcaggaa
     3181 gacgtatttg cccaatgctt tttgcgaagg ggtcagttgg attttggaaa tcgggtcttc
     3241 agacggcact tccacttcct cgtgtttggt caggaaggaa taaccccaca tcaacaaacc
     3301 gatgcccatc aagagcagta caacactggt aaacgaccac atgtagtttt cagtagtcgg
     3361 tacattgtta atcaaaggct cgtgcggcca gttgttggtg taggtaaaga cctcgccggg
     3421 acggttggtc gaagcagacc aagaagtcca gaagaagaag tcgaacagtt tttcacgcgc
     3481 ttcctgactt ggcaatgtgt tgtttttcat tgcaaagtgt tcgcgggtgg tttgcaactt
     3541 gggatcgtcg ccgtaaacgc cgtgataata aggcaggatg ctttcgatgg ctttcacgcg
     3601 cgtatcgctg atgactacag aaccgtcttc cttcacacgg ctttggttgc ggtattcgtc
     3661 agccagtcgg gttttcagaa cggcttgttc ttcaggggaa acttcatcga attttttgcc
     3721 gtaagtctgt tgcgcggtca aatccaacca ggcggacaac tcacgatgca gccagtcggc
     3781 cgtccagtcc ggagcctgat atgcgccgtg acccagaatc gaaccgactt ccatgccgcc
     3841 ggtactctgc cacgcagact gacctgccaa aatatcgtct ttcgtcatca agaccttgcc
     3901 ggatgcggaa acgacctgtt cggggtaagg cggggctttt ttgtaaacct cgctgcccat
     3961 atagccaaga atggtaaagc ataccgccag aacggcaaac agcaagtacc acagcttctt
     4021 gtactgtccc attttgagag ctccttttaa tatagtggat taaaattcac aaaatatgaa
     4081 tgttaaagat tgtagcacgg tttaccgcgc aaataaacat ttgttcaaag aaactcacat
     4141 ataaaacaaa tatatatatg ataataacta tcattattct ttagtcggca actaccctgc
     4201 ctttgcctga tttgccgaag cccttaagca aatcagccta tttattgtaa tttttagtag
     4261 ctataaagta ttagaagtat cattttaagt tcatatttta tgaattattt gacttaaatc
     4321 aaaatgcccc caatggggca aacgcataat cacaccaagt tcttaaccaa ttcctctact
     4381 tttcttacaa aaggaaaaca ttatgaaacg ccaagcctta gctgcaatga ttgcttcctt
     4441 attcgcatta gccgcctgcg gcggcgaacc tgccgcgcaa gcccctgccg cttccgcaga
     4501 agccgcaagt tccgccgcac aagctgccgc cgaaacgcct gcaggcgaac tgcccgtcat
     4561 cgatgcagtt accacccacg ctcctgaagt acctcccgca atcgaccgcg actatcctgc
     4621 caaagtacgc gtaaaaatgg aaaccgtcga aaaaaccatg aaaatggacg acggggtgga
     4681 ataccgctac tggacatttg acggcgacgt tccgggtcgc atgatccgcg tacgcgaagg
     4741 cgatacggtt gaagtggaat tttccaacaa cccgtcttct accgttcccc ataacgtcga
     4801 cttccacgcc gcaaccggtc agggcggcgg tgcagccgca acctttaccg ccccgggccg
     4861 cacttccaca ttcagcttca aagccctgca accgggtctg tacatctacc actgcgccgt
     4921 cgcgccggtc ggtatgcaca tcgccaacgg tatgtacggt ctgattttgg tcgagcctaa
     4981 agaaggtctg ccgaaagtgg ataaagagtt ctacatcgtc caaggcgact tctacaccaa
     5041 aggcaaaaaa ggcgcgcaag gcctgcaacc gttcgatatg gacaaagccg ttgccgaaca
     5101 gcctgaatac gtcgtattca acggtcatgt aggttctatc gccggcgata acgcgctgaa
     5161 agccaaagca ggcgaaaccg tgcgtatgta cgtcggtaac ggcggtccga acctagtgtc
     5221 ttccttccac gtcatcggcg aaatcttcga caaagtttat gtggaaggcg gcaagctgat
     5281 taacgaaaac gtacaaagca ccatcgttcc tgccggcggt tccgccatcg tcgaattcaa
     5341 agtcgacatc ccgggcagct acactttggt cgaccactcc atcttccgcg cattcaacaa
     5401 aggcgcgttg ggccaattga aagtagaggg tgcggaaaac cctgaaatca tgactcaaaa
     5461 attgagtgat accgcttacg ccggtaacgg tgcagctcct gctgcttccg ctcccgcagc
     5521 ttctgccccg gcagcctctg catccgaaaa aagcgtttat taaattggat acccgtcatt
     5581 agcgggacga accactgccg ctgtacttca ttacgcacgg cagtggtttt ttaacaacca
     5641 atctttcctt tcggaagatt gattttaacc gcctgtcagg aggctttatg aagtatgtcc
     5701 ggttattttt cctcggcgcg gcactcgccg gcactcaagc ggcggctgcc gaaatggttc
     5761 aaatcgaagg cggcagctac cgcccgcttt atctgaaaaa agataccggc ctgattaaag
     5821 tcaaaccgtt caaactggat aaatatcccg ttaccaatgc cgagtttgcc gaatttgtca
     5881 acagccaccc ccaatggcaa aaaggcagga tcggttccaa acaggcagaa cccgcttacc
     5941 tgaagcattg gatgaaaaac ggcagccgca gctatgcgcc gaaggcgggc gaattaaaac
     6001 aaccggtaac aaatgtttcc tggtttgccg ccaacgccta ttgcgccgca caaggcaaac
     6061 gcctgccgac cattgacgaa tgggaatttg ccggacttgc ttccgccacg cagaaaaacg
     6121 gctcaaacga acccggctac aaccgcacta ttctcgattg gtatgccgac ggcggacgga
     6181 aaggcctgca cgatgtcggc aaaggccgcc cgaactactg gggcgtttat gatatgcacg
     6241 ggctgatttg ggaatggacg gaagatttca acagcagcct gctttcttcc ggcaatgcca
     6301 acgcgcaaat gttttgcagc ggcgcgtcta tcgggtcgag cgactcgtcc aactatgccg
     6361 ccttcctccg ctacggcatc cgcaccagcc tgcaatccaa atatgtcttg cacaacttgg
     6421 gcttccgttg cacaagccga taaccccttc aattatagtg gattaacaaa aaccagtacg
     6481 gcgttgcctc gcct
//
LOCUS       DAWGBY010000104         6432 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.104, whole genome shotgun sequence.
ACCESSION   DAWGBY010000104 DAWGBY010000000
VERSION     DAWGBY010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.104"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(415..972)
                     /locus_tag="WHG62_001666"
     CDS             complement(415..972)
                     /locus_tag="WHG62_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpA"
                     /protein_id="HEZ1725748.1"
                     /translation="MENNKAKSDDNSVSIEFIQDFITASTDVINLSYENFRKNFYTQM
                     STDSTNYAAKHESLGKSVQRELQKTQSQLRQVVRKMQSKYNINNKARAAEISLLRQMQ
                     SQFSRKDVNKNLGNGNTLAQQGSYTKKDGTTAQAGDLLLAADNLHSRLTDKMLSISHV
                     RENTISPFVLGCLKQITINAYHYLK"
     gene            complement(1509..1793)
                     /locus_tag="WHG62_001667"
     CDS             complement(1509..1793)
                     /locus_tag="WHG62_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725749.1"
                     /translation="MKLALKRSGKYNVYDPLALDLDGDGIETVATKGFSGSLFDHTNN
                     GIRTATGWIAAYDGFSVRKLNSNGGIISTTDTIFQSLHTWLDHQPNDTCH"
     gene            complement(1790..2083)
                     /locus_tag="WHG62_001668"
     CDS             complement(1790..2083)
                     /locus_tag="WHG62_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HEZ1725750.1"
                     /translation="MNIDDFTPSKIANFFADPDTYSNVLEEVSRFIYSLVPDDANPWK
                     GGEDYIGRGISEWGELLEKWYKQDFLPYLEKNGTNFRNLKIGCLNSLNGQESG"
     gene            complement(2422..2643)
                     /locus_tag="WHG62_001669"
     CDS             complement(2422..2643)
                     /locus_tag="WHG62_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HEZ1725751.1"
                     /translation="MTYANFNINGFGDVKLTPYSPLLGYKAWDSFIGSIQSLSDLIYN
                     VDNNRNKMEITVNNAIQAADSFLSSNWKR"
     gene            complement(3439..4437)
                     /locus_tag="WHG62_001670"
     CDS             complement(3439..4437)
                     /locus_tag="WHG62_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ1725752.1"
                     /translation="MIASRLSGNISSAIQEHKDGKVNINRFQNILADLYSLGGLGSTL
                     IEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEFYNFDNWKGFGYELFEDWSR
                     WVYDWLPDGWNLWKELDRNRSGQYHIYDPLALDLDGDGIETVAAKGFSGSLFDHNGNG
                     IRTATGWVSADDGLLVRDLNGNGIIDNGAELFGDNTKLADGSFAKHGYAALAELDSNG
                     DNIINAADAAFQSLRVWQDLNQDGISQANELRTLEELGIQSLDLAYKDVNKNLGNGNT
                     LAQQGSYTKTDGTTAKMGDLLLAADNLHSRFTNKMLSISHVRENTISPFVLGCLNK"
     gene            complement(4655..5374)
                     /locus_tag="WHG62_001671"
     CDS             complement(4655..5374)
                     /locus_tag="WHG62_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725753.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
     gene            complement(5650..6084)
                     /locus_tag="WHG62_001672"
     CDS             complement(5650..6084)
                     /locus_tag="WHG62_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725754.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
BASE COUNT         2158 a         1140 c          952 g         2182 t
ORIGIN      
        1 tgagttcaat agatcttttt gtttttttac caagaggaaa gtctaccaca acaggttctg
       61 ggctaatagc catataaaaa atagtttcaa caaaactgca gctagcaatc aataggcaag
      121 atattattaa taatattttt ctaaatgcag acataataaa aatttccaaa aaatccatat
      181 cagaatatac taattatttg tataattaat aaggaagaga aaaattcaaa acggctatga
      241 gatttccgcc tgaaaataat gaaataaaag tccatagtaa tgaataatag ctttatcaga
      301 ccccctttaa tgcaaacata gagaatactt cccttgaagc actatcaatt tctacttaac
      361 taaaactcta gctctatttc taaaattttg tcaaaaatag ttaaatactt ttatttattt
      421 taaataatga tatgcattta tggttatttg ttttagacag cctaaaacaa acggggaaat
      481 cgtgttttcc cgaacatggc taatggatag cattttgtcc gtgaggcggc tgtgcaggtt
      541 gtcagcagcc aacagcaaat cgcctgcttg cgcggttgtg ccgtcttttt tggtgtagct
      601 gccttgttga gccaaagtgt tgccgttacc aagatttttg tttacatctt ttcgagaaaa
      661 ttggctttgc atttgcctta acaaagatat ttctgctgct cgtgctttat tatttatatt
      721 atatttactc tgcatttttc ttacaacttg tctcaactga ctttgtgttt tttgtaattc
      781 acgttgtacc gattttccta aactttcatg tttggctgca taattggtag aatcagttga
      841 catttgtgta taaaaatttt tacgaaaatt ttcgtaactc agattaatta catccgtact
      901 tgcagttata aaatcttgta taaattcaat agaaactgaa ttatcatcag atttggcttt
      961 gttattttcc atattaagcc tctcttaatt tgaaaaaatt aacataaaca tttaaaaata
     1021 aaacaaaatt atataataaa aaaataatga gaatataaag gataaaaaga gagttaagtt
     1081 atttaatcgg acttgttctc tataaatcat aaggcaccaa ataagccata ataaatttag
     1141 taaataaaaa ctgcttatac ccaactttct tttcttggaa cctattatta tttcaactct
     1201 ggatgaaaaa atagaattta aaaatttttt tctttgatat atcgttaata tctccctagt
     1261 ttttcttaaa aaaaatataa tcatatatat actacacaac attggtaata aataaattaa
     1321 aagcgaaagg taattaaatt gataattgta aattatataa taaacaacat acgaagaaaa
     1381 aattattata gatgatttgc tatacgaata aaaaaatatc ctacctagcc cgaaccttct
     1441 tataatttgt actatgtgat cattcatttc aatatccatt taagctttca attaattttc
     1501 tatatttttc aatggcatgt atcatttggt tgatgatcaa gccatgtatg caaagattgg
     1561 aatatggtat ctgtcgtgct aataatgccc ccgttactgt ttaatttgcg cacagaaaaa
     1621 ccgtcatatg cagcaatcca gcccgtggcg gtgcggatgc cgttgttggt gtgatcaaat
     1681 aagctgcctg aaaagccttt ggtggcaacg gtttctatac cgtcgccgtc caaatctagg
     1741 gcgaggggat cgtaaacgtt atatttgcct gaacgtttga gagctaattt caaccactct
     1801 cttgcccatt cagggaattc aggcagccaa tcttcaaatt tcggaaattg gtcccattct
     1861 tttcaagata agggagaaaa tcttgtttat accatttttc cagtaactct ccccattcac
     1921 ttatccctcg tccaatataa tcttcgcccc ctttccaagg gtttgcatca tcaggaacta
     1981 aggaatatat aaacctagat acttcttcta atacattgct gtatgtatca ggatccgcaa
     2041 aaaagtttgc tatcttactt ggtgtaaaat catctatatt cattatagat tcgccaagcc
     2101 tctcgtttcc ataatcctta tttaattcaa ttcatgctgt aaaacagtag aggattttag
     2161 cattctagaa ttaaggacat catttaaacc agtttttaat ttagttggta agaatttgct
     2221 ttgagccatc gcctctgttt gttgttttat atattgtaat ctatcaccag cagcaatgaa
     2281 tatatcacca atttcttgtt gaatatcatt aggtttaaat tttcctgttt ctcgtatatc
     2341 tcgagataca tttcttaaat ttaaaaaaat gttatcgagg gatgcaagta aagaagcagt
     2401 atttgttatt ttgttatttt gttatctctt ccaattactg cttaaaaagc tatctgcagc
     2461 ttgaatagca ttattaacag taatttccat tttatttcta ttgttatcca cattatagat
     2521 taaatcagat aaggattgaa tagaaccaat aaatgaatcc caagctttat atcccaagag
     2581 tggtgaatag ggtgttaatt tcacatctcc aaaaccgtta atattaaaat ttgcatatgt
     2641 catatctgct ttcctttcaa gtaaattaaa aaaataacgt gaggaattaa aattaagaat
     2701 aaattaatta tcgactcaat ataatatgaa tcaattagct ctcttatggt aaatataaga
     2761 ggtaaaaata ctaaaaataa actaataaag ttcagaaaaa tagtaaatgg aatattttca
     2821 tatggaaaaa ttctacaaaa tacaagtaat attccatgac atattaacaa atgagtaaaa
     2881 ttcattataa aatatataaa tatttcccca tcgtaagata tattcaaata aagacatata
     2941 aacaatataa agtatataaa atatattttt tggcacctaa aaaataaact tttagcaatc
     3001 atatatgaat agcttgtaga atagaaaacg aaaattatta attatcgtag gtgtgcattt
     3061 attccaacac ggtttcatgc agcttaaaaa ccagaaattc tttctccctt tccctttatc
     3121 ctttcttaaa aatagcgttt ccaaattctg caacgacagg tttcattcaa gtaggactgc
     3181 cgtgattgca tcaattgctt cgcggcatgg catccatatc acacaacagg acatttattc
     3241 tcgggtaagt ccaccttcat cctcttcggc cagcaggaac agttacaggc tacctaaaat
     3301 atgctctgtg ctcggatagt aaatatttcc tttctcacta ttgtttgtca tttaatcgac
     3361 agtctactct ttctctaaaa tttcgtcaat aatagttaaa tacttttatt tattttaaat
     3421 aatgatatac atttatggtt atttgtttag acagcctaaa acaaacgggg aaatcgtgtt
     3481 ttcccgaaca tggctaatgg atagcatttt gttcgtgaag cggctgtgca gattgtcggc
     3541 tgctaaaagt aaatccccca tttttgcggt tgtaccgtct gttttggtat agctgccttg
     3601 ctgagccaaa gtgttaccgt taccgagatt tttatttaca tctttatagg cgagatccaa
     3661 agattggata cccaattctt caagggtacg caattcatta gcttgggaaa tgccgtcctg
     3721 gttgagatcc tgccatacac gcagggattg gaatgcggcg tctgccgcgt tgatgatgtt
     3781 gtcgccgttt gaatccaatt cggccaaagc tgcatagccg tgtttggcaa aagaaccgtc
     3841 tgccagtttg gtgttgtcgc cgaagagttc cgcgccgttg tcgatgatgc cgttgccgtt
     3901 caaatcgcgc acaagcagac cgtcatcggc agaaacccag ccagtggcgg tgcggatgcc
     3961 gttgccgtta tggtcgaaga ggctgcctga aaagcctttg gcggcgactg tttctatgcc
     4021 gtcgccgtct aggtctaggg cgagggggtc gtagatgtgg tattggcctg aacggtttct
     4081 gtccaattct ttccacagat tccagccgtc gggcagccag tcgtataccc aacgagacca
     4141 gtcttcaaat agctcatacc caaaaccttt ccagttgtca aaattataaa attcctctgt
     4201 agatatcgta ccagtatctc ctgtggcaat agccgttgct gcaattatat ctccagcaat
     4261 tgctaatgga atcccccaac tctgcatatt tccattcttc tctattaatg tacttcctaa
     4321 ccctcccaat gaatataaat ccgctaaaat attttgaaaa cggttgatat taactttacc
     4381 atctttatgc tcctgaatag ctgaagatat atttccagag agacggcttg caatcacaga
     4441 ggcatttgtt ccgtttacaa tatgcgatga cgtactacct ggtgcaatat tactagccaa
     4501 attaccaaat gctaataatg cactataacc agcttgtttg taatattcat tacgtttcga
     4561 gatatctttc tcattttttg cagaaactaa attagcaacc atatttccaa attctgctaa
     4621 cgcggatgag cgtgcgctca taaaattacc aaaactattc caactcattg aagtaagtcc
     4681 tatataaaag caaattaaat tttaaatata aaataattaa tacgatacaa acactgtttt
     4741 caataagaaa aaatgtttta tacttatcta acaagtacaa acttttgttt ccatcattaa
     4801 tttcaaatat tacattatct ataaaatctc cttgaggttg attataaaaa taaattttaa
     4861 caggtttttt tgcaaatttt ataaaattgg cacatggagc atatgaatga ataccacaaa
     4921 ccaagcttaa tcttatggat ttatttttaa catcagatgc aactacatca atataaggtg
     4981 tttctctaat taccctacca tatctatgat tatcttttaa tttagcatat ccatttgagt
     5041 cataaacata attataacta tcatgtggtt ttatcacccc agtaatcgag gatatatttt
     5101 gttcctttat ttgatgctca aatttataaa attttatatt tatcatacta atatgaatta
     5161 ccatccatat aataatagaa atcggcaata aaaacaataa tttgtttttt atgttttttt
     5221 ctaaaaataa taaatttaca gcaagaaaga cgtttgcaaa aaacaaaaac gcaaaaaaat
     5281 caaatagaaa aacaaaataa ccaaacacta tattaattac tatcaaggct atatgtaaaa
     5341 ctataaatac tagtaaataa tttttatttt tcatatgtct cattaaataa aatatagctg
     5401 gtatgattta gtgaatatca atttagtggc atagagtgta tactcatcgt attcactctc
     5461 tcagtcttca ggctgcctga aaagcctttg gcggtgactg tttctatgcc gtcgccgtcc
     5521 aagtctaggg cgaggggatc gtagacgtgg tattttccat cacacgcaga aaattttttg
     5581 cattgtttag tatcaccact accaatcatt gttactctcc ttgagtttaa gtcaaacaaa
     5641 aaatgaaatt caaatactct ctcttaactt attgagatca atcatcaata taaataaaaa
     5701 atataaacta ccagaataac caaagccacg aaaaattttt tccaatattt cactatttaa
     5761 acaaaaagca ccgcataccc acgttgatga ttccgaaata aaacacatcc atatttccat
     5821 tactgccaac catgacacta ctatcctaat caaaaatact tttttatctg cccaagcact
     5881 ttttatattt aacaatacaa tatgattttg taatttaaaa tctaagcttt gcatttttct
     5941 aaccagtgca aacaaacaac caagcgcaat aaaaaaagat tggtaggact ggtaaaaagg
     6001 tagaaataga atatttaaga ccaatggata gatccacata tacctatttg ttaaattatt
     6061 aataaattct tttttgttat ccataaaatt tccataaaat attgcgctga tattgcactg
     6121 agtttattag caaacaacgt aaagaaaata tttattatga taagtgtttt ttaagtttca
     6181 ttttcaaatg atggcgcgta ataaaaagtt tcacaaatcc gtttttcaga ctatctaagt
     6241 atctatttta caatctattt caataatcgt tatgtcttaa caactcttct tggcattata
     6301 gatgctcact catatcattt aatgatactc ttgattaatc tttatgcgat ttagcgaaat
     6361 taaaatttct cttttttgtt tgaggctgta ctagattagc agatatgtta cccccgaaat
     6421 atgaagataa ca
//
LOCUS       DAWGBY010000105         6411 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.105, whole genome shotgun sequence.
ACCESSION   DAWGBY010000105 DAWGBY010000000
VERSION     DAWGBY010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6411
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.105"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            96..1121
                     /locus_tag="WHG62_001673"
     CDS             96..1121
                     /locus_tag="WHG62_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein"
                     /protein_id="HEZ1725755.1"
                     /translation="MKYKALSLLPLAAALAACAGGGVAEPHVPVSIPTATPLPGEVTL
                     SDDSVNIVNINTAGTGSTSSGISIQQRKYNVTSYGFTREEKAFIFKTPGGAQYTLSSY
                     ADPIVPSYSSPDFKIPDRHAGQRLADGSRIFICCSDSGATNQAEITKQDYMKFGAWIG
                     PNGEIDLFAGGFPVGKTPASSSYYSSTLETAGKGKITYQVWGIRVKDGQFVTSSYTPP
                     KNSSSYLYKPTNTPVLSFITANFNSNKLAGEIIGNSDYGPDVKIENATIDGLSFSGNA
                     TSGGKTGKLDGKFFGKFDSTRSSDTGIGGKITFKDDRSLDTVFGGVIYEKKLDDKTSQ
                     DTTHLTK"
     gene            1152..3584
                     /gene="hupB"
                     /locus_tag="WHG62_001674"
     CDS             1152..3584
                     /gene="hupB"
                     /locus_tag="WHG62_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HEZ1725756.1"
                     /translation="MHIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDIEIKNDGYVYNPTDTGGPSKYLTYVATGVARSQPDPQEWVNKSTLFKL
                     GYNFNDQNRIGWIFEDSRTDRFTNELSNLWTGTTTSAATGDYRHRQDVSYRRRSGVEY
                     KNELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINGEVYHSFRHIRQNTAQWT
                     ADFEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFAKLYAPKILASNQAKITMLIENR
                     SKYKFAYWNNAFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAH
                     AGFSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAEKAK
                     NWELGLAGSGKAGNFKLSGFKTKYRDFIELTYMGVSSNDPKKPTYAPLSDGTELVSSP
                     VWQNQNRTAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINAL
                     SPWTAVYSLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLF
                     DLSAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSP
                     GRSYNFTIEAKF"
     gene            complement(4210..5844)
                     /gene="groL"
                     /locus_tag="WHG62_001675"
     CDS             complement(4210..5844)
                     /gene="groL"
                     /locus_tag="WHG62_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ1725757.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGQVISEEVGLSLEKATLEDLGQAKRIEIGKENTTIID
                     GFGDAAQIEGRVAEIRQQIEVATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(5938..6225)
                     /locus_tag="WHG62_001676"
     CDS             complement(5938..6225)
                     /locus_tag="WHG62_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ1725758.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVE"
BASE COUNT         1584 a         1897 c         1529 g         1401 t
ORIGIN      
        1 gatttttgca tcgacccaca aaacagttga catcatataa catttaaact gataatcaaa
       61 actattatta acacatcatc aagattgagt atgcgatgaa atacaaagcc ctgtccttac
      121 tgccgcttgc cgctgccctt gccgcctgtg ccgggggggg ggtagccgaa ccgcacgtcc
      181 ccgtgtccat ccccaccgcc acgccgctac ccggtgaggt aacgttatca gacgatagcg
      241 tcaatatcgt aaacatcaac accgccggca caggaagcac atcctccggc atttctattc
      301 aacagcgaaa atataacgta acaagttacg gcttcacaag agaagaaaaa gcattcatct
      361 tcaaaacacc tggcggcgcg caatacaccc tttcatccta cgccgacccc atcgtcccca
      421 gctactcctc ccccgatttc aaaattcccg accgccacgc agggcagcgg cttgccgacg
      481 gcagccgcat ctttatctgc tgcagcgact ccggggcaac caatcaagcg gaaattacca
      541 aacaagatta tatgaaattc ggggcgtgga taggtcccaa cggcgaaatc gacctcttcg
      601 ccggcggctt ccccgtcggc aaaacaccgg catcaagcag ttattacagc agcacgctcg
      661 aaaccgccgg caagggcaaa atcacttatc aggtttgggg catccgcgtc aaagacgggc
      721 aatttgttac ctcctcttat acgccgccga aaaacagtag ttcttatttg tacaaaccta
      781 ccaacacccc cgtcctttcc tttatcaccg ccaatttcaa cagcaacaaa ctggcaggcg
      841 aaatcatcgg caacagcgat tacgggccgg atgtgaaaat tgaaaacgca acgattgacg
      901 gactatcctt ttccggcaat gccacctccg gcggcaaaac cggcaaattg gacggcaagt
      961 tttttggcaa gttcgacagc acccgcagca gcgacaccgg cataggcggc aaaatcactt
     1021 ttaaagacga ccgctccctc gataccgtat tcggcggcgt gatttatgag aaaaaacttg
     1081 atgacaaaac cagtcaagat accacccatc tcacaaaata ataattaatc cgcttttaaa
     1141 aaggttttct tatgcacatc cctttcaagc ccgtattggc tgccgccgcc atcgcccaag
     1201 cgtttcccgc ctttgcggca gaccccgcgc cgcagtccgc ccaaacgctg aacgaaatca
     1261 ccgttaccgg cacgcacaaa acccaaaaac tcggcgaaga aaaaatccgc cgcaaaactt
     1321 tagacaagct cttggtcaac gacgaacacg acctggtgcg ctacgacccc ggcatttccg
     1381 tcgtcgaagg cggcagggcg ggttctaacg gctttaccat acgcggcgtg gacaaagacc
     1441 gcgtcgccat caacgttgac gggctggcgc aggcggaaag ccgctcttcc gaagccttcc
     1501 aagaattgtt cggcgcgtac ggcaacttca acgccaaccg caacacttcc gagccggaaa
     1561 acttttccga agtaaccatc accaaaggcg cggactcgct caaatccggc agcggcgcat
     1621 tgggcggcgc agtcaattac caaaccaaat ccgcaagcga ttatgtttcc gaagacaagc
     1681 cctaccattt ggggataaag ggcggcagcg tcggcaaaaa cagccaaaaa ttcagcagca
     1741 tcaccgccgc cggcaggctc tttggtttgg atgccttatt ggtttatacc cgccgcttcg
     1801 gcaaagaaac caaaaaccgc tcgaccgagg gcgatatcga aattaaaaac gacggatatg
     1861 tctataaccc gaccgataca ggcggaccca gcaagtacct gacctatgta gccacagggg
     1921 ttgcgcgctc ccaacccgac ccgcaagaat gggtaaacaa aagcaccttg ttcaagctgg
     1981 gctacaactt caacgatcaa aaccgtatcg gctggatttt tgaagactcg cgcaccgacc
     2041 gttttaccaa cgagctgtct aatttgtgga cgggtacgac cacgtctgcc gcaacgggcg
     2101 actaccgcca ccgccaagac gtgagctacc gccgccgctc cggtgtcgaa tacaaaaacg
     2161 aattggaaca cggcccgtgg gacagcctca agctgcgcta cgacaagcag cgcatcgata
     2221 tgaacacttg gacttgggac atcccgaaaa attacgattt gcgcggcatc aacggcgagg
     2281 tttaccattc gttccggcat atccgccaaa acaccgcgca atggactgcc gattttgaaa
     2341 aacaactcga cttttccaaa gccgtttggg cggcgcaata cggcttgggc ggcggcagag
     2401 gggacaatgc caactcggat tacagctatt tcgcaaaact gtacgccccc aaaatcctcg
     2461 cttccaacca agccaaaatc acaatgctga tcgaaaaccg gtcgaaatat aaatttgcct
     2521 attggaacaa tgcgtttcac ttgggcggca acgaccgctt ccgcctgaat gcgggcatac
     2581 gctacgacaa aaacagcagc agcgcgaaag acgatccgaa atacaccacc gccatccggg
     2641 ggcagattcc ccatttgggt tcggaacgcg cgcacgcggg cttcagctac ggcacggggt
     2701 tcgactggcg gtttaccaag catctgcact tgttggcaaa atacagcacc ggcttccgcg
     2761 caccgacttc ggacgaaacc tggctgctgt tcccacaccc cgatttctac ctgaaagcca
     2821 acccaaacct gaaagccgaa aaagccaaaa actgggaatt gggtctggcg ggcagcggca
     2881 aagcgggcaa cttcaagctc tcgggcttca aaaccaaata ccgcgacttt atcgaattga
     2941 cgtatatggg cgtttcgtca aacgacccta aaaaacccac ctacgccccg ctttcagacg
     3001 gcaccgaatt ggtcagctcg cccgtttggc aaaaccaaaa ccgcaccgcc gcctgggtga
     3061 aaggcataga gtttaacggc acttggaacc tcgacagcat cggcctgccc aaagggctgc
     3121 acaccggcct caacgtcagc tacatcaagg gcaaggcaac gcaaaacaac ggcaaagaaa
     3181 cgcccatcaa cgcgctttcg ccgtggacgg cggtttacag cttgggctat gacgcacctt
     3241 ccaaacgctg gggcatcaac gcctacgcca cacgcaccgc cgccaaaaag ccgtccgaca
     3301 ccgtccacag caacgacgac ttgaacaacc cgtggcctta tgccaaacac agcaaggcct
     3361 atacgctgtt cgacctttcc gcctacctca acatcggcaa acaggttacg ctccgcgccg
     3421 ccgcgtacaa cattaccaac aagcagtact acacttggga atctttacgc agcatccgcg
     3481 agttcggcac ggtcaaccgc gttgacaaca aaacccacgc cggcatccaa cgctttacct
     3541 cgccgggcag gagctacaat ttcaccatcg aagcgaagtt ctaagctcct gatgtgccaa
     3601 tgccgtctga aacccgatga tttgggtttc agacggcatt ttttacggtc gcaccgccgc
     3661 cccctttcag gcttgtacca agcccaatcc cgcaactctc cgtcattccc gcaactctcc
     3721 gtcattcccg caactctccg tcattcccgc gactctccgt cattcccacg gaagtgggaa
     3781 tctagaaacg caaagctgca agaatttatc ggaaatgact gaaactcaac gaacctggat
     3841 tcccgcctgc gcgggaatga cgaagctatc cgcacagaaa cctgcaccac gtcattccca
     3901 cgaaagtggg aatccagaac gtaaaatctg aagaaaccgt tttatccgat acgtttccgc
     3961 accgacagac ctagattccc gctttcgcgg gaatgacggc ggaaaggttg ctgtttttcc
     4021 gataaattcc tgccgctctt cgtttttggg atggcgggaa ataaaacaaa agcgcgcgta
     4081 tcaaaaaata acaatgcaaa gaacggtgtt ggcaatttta aggtttgcgc cttagccgca
     4141 cttattcgca aaaaaaccgc acggcgttga ccgtgcggct tgttgtctga aggcttcaga
     4201 cggcattgct tacatcatgc cgcccatacc acccatgccg cccatatcag gcatagccgg
     4261 tttgtcttca gggatttcag caatcatgca gtctgtggtc agcatcaggc cggcgataga
     4321 cgcggcgtgt tgcagcgcgg aacgggttac tttggcgggg tcgagtacgc ccatttcgat
     4381 catgtcgccg tattcgccgc tgccagcgtt gtaaccatag ttgcctttgc cttccaacac
     4441 tttgttcaca accacgctgg gttcgccgcc tgcgttggca acgatttggc gcagcggaga
     4501 ctcaacggcg cgcaagacga tttgtacgcc tgcgtcttgg tctgcattgc cggtgtgcag
     4561 gttttccaga gcggcacggg cgcgcaacag ggctacgccg ccgcctgcga ccacgccttc
     4621 ttcaacggcg gcacgggtcg cgtgcagcgc gtcttctacg cggtctttct tctctttcat
     4681 ttccacttcg gttgcggcac cgactttaat caccgccaca ccgccggcca atttggccac
     4741 gcgctcttgc agtttttcac gatcgtagtc gctggtggcc acttcgattt gctgacggat
     4801 ttccgccaca cggccttcga tttgggcggc atcaccgaag ccatcaataa tggtggtgtt
     4861 ttctttgccg atttcaatgc gtttggcttg acccaaatct tccaaagtgg ctttttccaa
     4921 agacaagccc acttcttccg aaatcacttg gccaccggtc aaaatggcga tgtcttgcaa
     4981 catggctttg cgacggtcgc caaagcccgg tgctttcacg gccacggttt tcaggatgcc
     5041 gcggatgttg ttcaccacca aagtcgccaa ggcttcgcct tccacgtctt cagcgataat
     5101 caagagcggg cggctggctt tggccacttg ttccaaaaca ggcaacaaat cgcggatatt
     5161 gctgattttt ttgtcgaaca acaatacaaa cggattgtcc aaagcagcga tttgtttttc
     5221 agcgtcgttg atgaagtaag gagacaggta gccgcggtcg aactgcatac cttcaaccac
     5281 gtccagctcg ttttccaaag atttgccgtc ttcaacggta atcacgcctt ctttgccgac
     5341 tttttccatc gcttcggcaa taatcgcgcc gacttgttcg tcagagttgg cggaaataga
     5401 gccgacttgg gcgatttctt tagaagtgtc gcaaggtttg gcgatgtttt tcagctcttc
     5461 aaccaaagcg gcgacggctt tgtcgatacc gcgtttcagg tcggtcgggt tcataccggc
     5521 ggtaacgtat ttcatacctt cggcaacgat ggattgcgcc agtacggtgg cggtagtcgt
     5581 accgtcgccc gccacgtcgt tggttttgga cgcgacttct tttaccattt gcgcgcccat
     5641 attttcaaac ttgtctttca gttcgatttc tttagcgacg gttacgccgt ctttggtaat
     5701 gtgcgggccg ccgaaagcgc ggtcaaccac cacgttgcgg cctttgggac ccagggttac
     5761 gcgcacggcg tttgccagaa tgttcacgcc gtttaccatt ttttgacgga cttcattgcc
     5821 gaattgtacg tcttttgctg ccatttcaat tctccaaaaa tcattaaaac tgtctgataa
     5881 aaccgtttat gccgtctgaa ggcggtttgc cgtttcagac ggcatcatca ttcgcactta
     5941 ttcaacgatg ccgaaaatat cttcttcgcg cattaccaac agctcttcgc cgtcggcttt
     6001 tacggtttgg ccgctgtatt tgccgaaaat gattttgtcg ccgactttga catccagcgg
     6061 acggcgcgcg ccgtctttac cgattttgcc cgcgcccacg gcgatgactt cgcccatatc
     6121 gggtttttcg gcggccgcac ccggcaaaac gatacccgat gcggtttttt cttcagcttc
     6181 caagcgtttg acgacgacgc ggtcgtgtaa aggacggatg gtcatattta tgctccgata
     6241 aaatggtttg aaaacaatca tctgcccgaa cggttcggac agattgaagt ggaaaccggg
     6301 ctgccgcctg ccggccgccc gtatgaatcg gcaaaattag ggtgtgtgcg ggcaaattca
     6361 agtgaggcgg aaaaaattta tttccgccgt tttttatagt ggactaaatt t
//
LOCUS       DAWGBY010000106         6310 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.106, whole genome shotgun sequence.
ACCESSION   DAWGBY010000106 DAWGBY010000000
VERSION     DAWGBY010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.106"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            176..1234
                     /gene="alr"
                     /locus_tag="WHG62_001677"
     CDS             176..1234
                     /gene="alr"
                     /locus_tag="WHG62_001677"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ1725759.1"
                     /translation="MRPLNVQIRLGNLRHNYQILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLIRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     TPSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1298..2653)
                     /locus_tag="WHG62_001678"
     CDS             complement(1298..2653)
                     /locus_tag="WHG62_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ1725760.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAASKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(2669..2941)
                     /locus_tag="WHG62_001679"
     CDS             complement(2669..2941)
                     /locus_tag="WHG62_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ1725761.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3067..3804)
                     /locus_tag="WHG62_001680"
     CDS             complement(3067..3804)
                     /locus_tag="WHG62_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ1725762.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHQRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4085..4984)
                     /gene="prmB"
                     /locus_tag="WHG62_001681"
     CDS             complement(4085..4984)
                     /gene="prmB"
                     /locus_tag="WHG62_001681"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ1725763.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5129..5722
                     /locus_tag="WHG62_001682"
     CDS             5129..5722
                     /locus_tag="WHG62_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725764.1"
                     /translation="MADGMGNLIGWEKTGLVAGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGYELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5834..>6310
                     /locus_tag="WHG62_001683"
     CDS             5834..>6310
                     /locus_tag="WHG62_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ1725765.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIATAAMKA
                     AIPDYMKFGEGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVAKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVSTCFKADKSAEAVNNDTEHNT"
BASE COUNT         1700 a         1589 c         1475 g         1546 t
ORIGIN      
        1 atttgggaaa gcgattatat caggaaaagc aaaccgcctt cctacctgaa aactgctgct
       61 tcggcttgaa gacacaaggg tctttaatat tttaaaagcc ttgccgttgg attataattc
      121 cctaattgat ttcttaattt tgctaataaa cacttgtttg gtaaggaatg aatttatgcg
      181 tcctttgaac gtgcagatca ggttgggcaa ccttaggcac aattatcaga ttttaaagga
      241 aatgcacgga ggcaagctgt tggcggtagt gaaggccgac gcatacggac acggtgcggt
      301 cagatgtgct ttcgcgctgg cagacttggc agacggcttt gccgtggcga caatcgatga
      361 aggaatcagg ctgcgggaga gcggcattac ccatccgatt gtccttttgg aaggcgtatt
      421 tgaagcatca gagtacgaag cggtcgaaca atactcgctt tggccggcag tcggaaacca
      481 atggcagctt gaggctttgc tgatccgcca ttggaaaaaa cccgtcaaag tctggttgaa
      541 aatggattcg gggatgcacc gtaccggttt tttccctcat gattacgctt cggcatatgc
      601 ggcattgaaa cagtcggaat atgtggacag tattgtcaaa ttctcgcatt tctcctgtgc
      661 ggacgaaccc gaaagcggta tgacggaaat acagatggaa gcattcgatt tgggtacgga
      721 agggctggaa ggcgaagaaa gccttgccaa ttcggcggct attttgaatg ttcccgaagc
      781 acgcagggat tgggggcgcg cgggcttggc gttatacggc atttccccgt tcggaggcag
      841 cgatgacagg ctgaaacccg tgatgaggct ttcaacccgt atttttggcg aacgcgtttt
      901 acagccgcac tcccctatcg gttatggcgc aacattttat accagcaaat ctacgcgcgt
      961 cggtctgatt gcctgcggtt atgcggacgg ttatccgcgc cgcaccccaa gcaattcccc
     1021 cgtcgctgtc gacggcaaat tgacccgggt catcggcagg gtctctatgg atatgatgac
     1081 catcgagctg gacgcttcgc aagaaggttt gggacacgag gtcgaactgt ggggcgatac
     1141 ggtcaacatc aatactgttg ccgaagcggc cggaaccatc ccttacgaat tgatgtgcaa
     1201 tatcaaacgt gcaaaattca cttatatcga gtaatcaagt ccaaacaaaa atgccgtctg
     1261 aagcctttca gacggcattt ccccatcaaa accgcaatca gtttttcatc gattgaaccg
     1321 gtgcgggaat cctgccgccc cggttgacga acacttcgca tgagccttct tttaccggca
     1381 ttacaggcgc gtagcccaac aggccgccga actcgacgct gtcgccgacg gtttttccgg
     1441 ttaccggaat aatgcgcacg gcagtggttt tgctgttgat catgccgatg gcggcttcgt
     1501 cggcgatgat gccggaaatg gtgtgtgcgg gcgtatcgcc agggacggca atcatgtcca
     1561 gcccgaccga gcagacggcg gtcatcgctt cgagtttatc caacgtcagc acgcctgctt
     1621 cggcggcggc aatcatacct tcgtcttcgg aaacggggat aaacgcgcca ctcaaaccgc
     1681 caaccgcgct cgaagccatc atgccgccct ttttcacggc atcgttcagc aatgccaaag
     1741 ctgctgttgt gccgtgcgta ccgcagacgc tcaaacccat ttcttcaaga atgcgcgcca
     1801 ccgagtcgcc gacggcaggg gtcggtgcca gcgacaagtc gagaatacca aacgggatat
     1861 tcagcatttt tgaggcttcg cggccgatga gttcgcccac gcgggtaatt ttgaaggcgg
     1921 ttttcttcac aacttcggca acttcggtca atgtcgttgc atccgaattt tccaacgcgg
     1981 cttttacgac acctgggccg gatacgccga cattaatcac agcatccgct tcgcccgatc
     2041 cgtgaaacgc acccgccata aacggattgt cttccaccgc attgcagaac acgacgattt
     2101 tcgcgcagcc gaaaccttcg ggcgtaattt cagccgtgcg tttgatggtt tcgcctgcca
     2161 gcttgaccgc atccatattg ataccggcgc gcgtactgcc gacattgatg gagctgcaca
     2221 cgatgtcggt ggtcttcatc gcttcgggaa tggaacggat taacacctcg tctgaaggcg
     2281 acatgccttt ttgcaccaac gcggaaaagc cgccgataaa ggacacgccg atggctttgg
     2341 cagccttatc caaagtttgc gccacgctga cgtaagaatc ggctttgctc gccgccgcga
     2401 tttgggcaat cggcgtaacg gaaatgcgct gattcacaat cggcacgccg tatttggcag
     2461 acagatattt tgccgtcgcc accaagtctt tgccgaccgt ggtgattttg ttgtaaatgt
     2521 tttggtttaa cacgtcgatg tcggtgctga tgcagtcgtg caaatcaatg ccgatggtaa
     2581 tggtgcgcac gtcaaaattc tggtcggcca ccattttgac ggtttctaaa atctcgccgg
     2641 attgaatact catggctctc cctccgactt aaatacggtg catggcttgg aaaatttctt
     2701 cgttttgcat acggatatca agcgcgagtt ttttgctctc ttccgcaaac aaatccaaaa
     2761 cctcctgccg agatttgggg catttcgagg tatccaccaa gataatcatg gtaaaaaaat
     2821 cgtccatcag ctgttggctg atattaagga tgttgattcg gttttccgcc aaaattttgg
     2881 aaacatcgta cacgatgccg acgcggtctt tgccgatgac ggtgatgact gaattgttca
     2941 caggcttact ccttgcagat atccgttaaa gtccgaaatt ataccaccgt tggattttga
     3001 agaaatattg tcaacaatat atacatacaa aatgccgtct gaaactattt cagacagcat
     3061 caagattcag ggttcgatta aataaccatc cttatcccac tgggttttcc tgaccaactt
     3121 gtcatcctga taaacagcct cgctcttttt agaaccatct tcataccact ccaaaaccac
     3181 cccgttgcgt tgatggtggc ggatagacag ttccgagagt aatcggccgc tttcatccca
     3241 agtcagaatt ttggcaggct catcgttgac cataaccatt tccgttttga tattgccgtc
     3301 ggcataccat tgcttccata cgccgtttgc cttattctgt ttaaactgga tttcgctttc
     3361 cttgccgccg ttacggtaat agcggtaccc cgtaccttca ctcaaaccat ttttataagg
     3421 cataacggca gattttttac cgttcggata ccagttgacc cactccccgt ccggcttacc
     3481 cttgctgaag ccccccgcca tttttttctg accattaaaa tgccacaaaa tcaacatacc
     3541 gttttgcagg gtaggcacaa aagatttgat ttgcgttgaa gcaacgatat aaggttcgga
     3601 atatttcttc atcgacggat aataaaaatc ctgcgcgtgc gcaataccct ccgccacact
     3661 atattgcctg atataagcgg cagaagacat cgtcgccgtc agtttcccgt tctgattaaa
     3721 ataaacagaa taggtctgcg ccggcaaagc ggccgaaaaa cccaacagga cagttgaaaa
     3781 tacaatccga gataattttt tcattgcaat agcgatataa aaacaaggct gtgttttagt
     3841 aatcttttga tttcaattat ttgcaaggga aaagacaatt attttccggt taggaataaa
     3901 cctattctat tgaatatatt gaagccaagt acgcctatca acactatatt aaaacactgc
     3961 caaaaacaat taacttataa acaatatggt aaggatttct ctgccaagca tcaaacccga
     4021 gacaacgtat cgtaaaaatg ccgtctgaaa acaaatcgtc ttcagacggc atttcccctt
     4081 caactcactc ttcacccaat aactgctcgc gcgtcaagag gaaaacaaaa ccgtcgcccc
     4141 cgctggtttc caaccaagta aaaggcaact ccggatacgc tgcttccaat acatccctgt
     4201 tatgcccgat ttccaccagc aatacacctt tgggattcag aaactttgcc gcattcagaa
     4261 gaatctgcct ggtggcatcc aacccgtccg ccccgctgcc caatgccaat tccggttcgt
     4321 gcaaatactc ttcaggcaat aactcaaccg attccgcatc cacataaggc ggattggaaa
     4381 caatcaaatc ataagtgcct tccaatcctt caaacaaatc cgtatgaata agccggatgc
     4441 gttcttccaa accataatct tcgacattaa tccctgccac ttccaaagca tccaagctca
     4501 catcaaccgc atcaatttgg gcatcaggat aatgatgcgc catctgaatg gcaaggcaac
     4561 cgcttccggt gcaaagatcc aaagcattat gcaccaactc atcgtattct atccaaggac
     4621 gaagtccgtc acccaacaat tcataaataa aagaacgagg tatgattacg cgctcatcca
     4681 catagaaatc aaactctccc tgccatgcct ggtgtgtcaa ataagcggct ggaatgtgtt
     4741 cgacagcacg acgctcaata accgtcagca cttcctcttt ttcagcttcc aagagttttg
     4801 catcaagata tggggcaagc atatccaaag gcaaattcaa agtatgcaga atcaaataag
     4861 ctgcttcatc atgcgcatta tccgttccat gaccaaaaaa gagccctgcc tcattaaaac
     4921 ggctgactgc aaaacgtaaa acatcgcgga tagtcgtcaa ttcttgtgct gcctgattaa
     4981 acataatatg aaccattctg cgtatagata cttttaatta taacagaaac aacaagcaaa
     5041 ccttttcata tcgccaaata accacccaat ctacccatac aactacataa atgcccgcgc
     5101 gaaaaccatc gcccgaacgg aaacgacaat ggccgacggt atgggcaacc tgattggctg
     5161 ggaaaaaacg gggcttgttg ccggtaagca gtggataacc gcaaaagacg acaaggtgtc
     5221 cgatgtctgc aatgccaacg gcgagatggg cgtaatcggg ctttacgagc ctttctcaca
     5281 cggcgcattg acgatacccg gtcatccgaa ctgccgatgc gaggttgttt ccgtatcggg
     5341 tggcgaattg ggggaatttg ccgaaaaaaa ggagcttcgt aaagcggcta tgcagtatgc
     5401 gcgggataac tttatcggca aaagctatgt caatgaaaac agcgggtatg aactgaaggt
     5461 aacttggcaa ggtgtgaaac acgctgcgtc aaaggcaaat caggcggaat tatccatcat
     5521 gacaaaactt gatgacttat tgcgctacgc aaaatatgag ggttcttatt cggataggaa
     5581 aggtcatcct aatattattg cagcacataa gtatcgtgcc gttgccaagg ttgggaatga
     5641 gtctttaaat atcggtgtga ttgtaaggga atttccagac gaccataaac attacgacca
     5701 tttcatcttg aaggatgaat aaagcccttt tgcagtgtcg ttctggagcg gatagcgtta
     5761 aggcaagtac acttccagcc ttgaaaaagg gctttaaatt cagcatgcca tttatacagg
     5821 caggagtaaa cccatgacaa agttatacgc agaaatcgcc aagatggaga cgcaggacga
     5881 cgacacggtc aaggtttggg gttacgcttc aagcgaggaa atcgattcgg acggcgaagt
     5941 catcgcgacg gcagctatga aggcggcgat tcccgattat atgaagtttg gcgaggggcg
     6001 cgagatgcac ggctcaaacg ctgcgggaac ggcaattgaa atcaacgttg aagacgacgg
     6061 cataaccttt ttcggtgctc atatcatcga ccccgttgtc gtggcgaaag tcaaaacagg
     6121 cgtttacaaa ggcttttcca tcggcggcag cgttaccgcc cgcgatgatt tgaacaagtc
     6181 ccaaatcacg ggcttgaagc tgacggaaat cagccttgtc gaccgccctg ccaatcccga
     6241 tgcggtgtct acctgcttta aggcggacaa aagtgcggaa gcggtaaaca acgatacaga
     6301 acataatact
//
LOCUS       DAWGBY010000107         6258 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.107, whole genome shotgun sequence.
ACCESSION   DAWGBY010000107 DAWGBY010000000
VERSION     DAWGBY010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.107"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(391..825)
                     /locus_tag="WHG62_001684"
     CDS             complement(391..825)
                     /locus_tag="WHG62_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ1725766.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(828..1490)
                     /gene="exbB"
                     /locus_tag="WHG62_001685"
     CDS             complement(828..1490)
                     /gene="exbB"
                     /locus_tag="WHG62_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ1725767.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            complement(1556..2398)
                     /locus_tag="WHG62_001686"
     CDS             complement(1556..2398)
                     /locus_tag="WHG62_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ1725768.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            2653..3291
                     /locus_tag="WHG62_001687"
     CDS             2653..3291
                     /locus_tag="WHG62_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ1725769.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            complement(3743..4543)
                     /locus_tag="WHG62_001688"
     CDS             complement(3743..4543)
                     /locus_tag="WHG62_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ1725770.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTMAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(4679..5182)
                     /locus_tag="WHG62_001689"
     CDS             complement(4679..5182)
                     /locus_tag="WHG62_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725771.1"
                     /translation="MDFFDFFAQGKYKKIATEQGLDRKYFIFQYIVCNLSAISSFCLM
                     KIIHTYTILYILIAVIGIINGFLLRSKVLSIVKNKQKFLSDMFPLEMPFFFVEYKIPI
                     LARFLNRGMKWLYLPSFFCLVAICFSIYILNEEGGWMPYFACYWFGLCYPVSTYYVFL
                     SRDYKHI"
     gene            complement(5519..6160)
                     /locus_tag="WHG62_001690"
     CDS             complement(5519..6160)
                     /locus_tag="WHG62_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ1725772.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
BASE COUNT         1671 a         1567 c         1296 g         1724 t
ORIGIN      
        1 ggtatagcgg attaacaaaa accagtacgg cgttgcctcg ccttaactca aagagaacga
       61 ttctctaagg tgctgaagca ccaagtgaat cggttccgta ctatttgtac tgtctacggc
      121 ttcgttgcct tgtcctgatt tttgttaatc cactataaaa attagaaatg cacattttca
      181 ttattctcgc gcaggcagga ctccagactt acccatttca gtaatgtttg aaaataaaag
      241 aaaaatcaga tgtttgtatt cccgcctgcg cagaaatgga gacggtgctc tgtcgtctca
      301 tttttgtttt aatcaactat atatagctga ttaaacataa gaaatgccgt ctgaaagact
      361 ttcagacggc attcgttcaa gcgtcgaact ttattgcgcc ttggtttcgg ttacaaaacc
      421 gattttggtg attcctgcct gacgggcggc ttctaaagct ttgtttacat aatcgtattc
      481 caccgccttg tctgccgcaa tcgccacaat cacgttttca ttctgctcct tggcggcttt
      541 cagacggctt tccacttccc cgatttccac tttgcttgca gaatccccgc cgacataata
      601 gccgccgttc gcatcaatcg tcaggcgcag ggggtcttta ggctgtttgt cctgcttgtt
      661 tgtctgctcg gacgcggtcg gcagttccaa agggatggaa tgcgtcagca ccggcatagt
      721 aatcataaac acaatcagca acaccagcat cacgtccacc aacggcgtaa cgttgatgtc
      781 ggacatcgga gaatcgtcgc cggaattcat cgaaccaaat gccataatca gctatccttt
      841 tgattaagca ggcggacgtg caaatcgtgc gccatcgcat ccaaatcctg ggtcagtatt
      901 tttgtgccgc gattgaggaa gttgtatgcc aacaccgccg gaatcgccac gaacaaaccc
      961 gccgccgtcg ccaccagtgc ctcgccaatc gggccggcaa ccgccgcaat actcatctgc
     1021 ccgctttgcc cgatattgat cagggcgtgg taaatccccc aaaccgtgcc gaacagcccg
     1081 ataaacggcg cggtcgcgcc gatggaggca agcgcggtca tcccgtaatc aaaccggcgc
     1141 ataatctgcg ccatactgtt gcggatttga atgaccaaat actcgttcaa cggcaaagcc
     1201 tgcgccagtt cggacgcttc gtttcggcgg tagttgcggt aagactgcaa tgcctcttgc
     1261 gccagtttgg acaaaggcgc atcgacggcg cgcacttttt cgaccgcgtc gttcagcgac
     1321 aaagtatcgc gcatatgccg tttgacggcg gcattccctt tgcgcgcccg atacagcttg
     1381 atgcagcgca agacaaccaa acaccacgtt acgatactca tcaacagcat caacacaaac
     1441 acaccgatca ggacgggatc gcccgattca aatactaatt tcaaattcat aatgattcca
     1501 acactgaaaa aaccaatcaa acatccaagc tgccgcaaac cgctgcggca accgcctaat
     1561 tcaattcaaa cttgacgggg actttaaact ccgtccaggc attggcttga aaatgcccgt
     1621 tttgcgccgc cttgcgtgcc gcattgtcca accgagaaaa accactgctt ttcacgattt
     1681 taacggactc gacatgaccg cccggagaaa ccaaaacgct caaaacaacc gtaccctgct
     1741 cgtcattctc catagaaagc gtgggataag ccgggcgcgg aatgctgccg ttggcgcgta
     1801 aaggattgcc tttgctgctg ccggctcctt ccccgtgttc gcctttgaca ccgccgctac
     1861 ctttaccgct gccttctccg cgccccgttc cgtctccttt ggtaccggtt cccttatctt
     1921 ccccattacc ctgctcgctg tctgctttgg cagaagcatt gctgggatgt tcggcaggtt
     1981 tttcagacgg cttctcgacc ggtttttccg ccggtttcgg gacaggcttc gcttccggct
     2041 taggctctgg tttcggtttt tcttcgggtt tcggcttttc ttcaggtttc ggctcttcct
     2101 taggctgctg aatatccgca tccgcctttt tcgtaaccac cggcttcaaa accggcttgg
     2161 gcggctcgac aggtttgggc ggctcaggct caggttgcgg ctcaggcgca gcaggcgcac
     2221 ctgcgccttc gggtgcaccg tcccctccgc caaaatcacc caaatcgaca aattcaataa
     2281 cattgcctga ctctatcacg ggcagcttgt gcgcctgcca aagcaatgcc accattgcca
     2341 aatgcagcag tgcgacggaa aacacgactg cgggggttaa aattcgttct ttatccataa
     2401 ttcgggcata ataatagcaa caattcctat ttgcaaccta tttttacaat ttttggtcat
     2461 atgaatgtct gttccgttca caggcaaacc gtgtttaaac gctgtattac agcaaatcat
     2521 cagataacgg gccggcagaa aaaatgattc cgtctgattt cttattccaa taaaatcagg
     2581 ttagatgata tattgccgct tctgtctgtc agccgtttcg ggctgcacac cacatctgtt
     2641 caaaggaaaa ccatgtttca aaattttgat ttgggcgtgt ttctgcttgc cgtcctgccc
     2701 gtgctgctcg ccattaccgt cagggaggtg gcgcgcggct atacggcgcg ctactgggga
     2761 gacaacactg ccgaacaata cggcaggctg acactgaacc ccctgcccca tatcgatttg
     2821 gtcggcacaa tcatcgtacc gctgcttact ttgatgttca cgcccttcct gttcggctgg
     2881 gcgcgtccga ttcctatcga ttcgcgcaac ttccgcaacc cgcgccttgc ctggcgttgc
     2941 gttgccgcgt ccggcccgct gtcgaatctg gcgatggctg ttctgtgggg cgtggttttg
     3001 gtgctgactc cgtatgtcgg cggggcgtat cagatgccgt tggctcaaat ggcaaactac
     3061 ggtattctga tcaatgcgat tctgttcgcg ctcaacatca tccccatcct gccttgggac
     3121 ggcggcattt tcatcgacac cttcctgtcg gcgaaatatt cgcaagcgtt ccgcaaaatc
     3181 gaaccttatg ggacgtggat tatcctgctg cttatgctga ccggggtttt gggtgcgttt
     3241 attgcaccga ttgtgcggct ggtgattgcg tttgtgcaga tgttcgtctg actggctttc
     3301 agacggcata aacgctccag aaaacgcggc aggacatatt gccctgccgc gttttcctgt
     3361 agtgtaatct tatttttttc atcattatta gaaccaagtt gcatgataat acctttcatt
     3421 aactgaaaca ctgattaaga aactccagtc tgtctaatga tgaggttttc acatcgccaa
     3481 aacttgccaa tcaaatgctg gatttattgc cgtctgagat ttggtcaaat ccaaaggcga
     3541 cattcttaga ccctgtgtgt aaatcagggg tatttttgcg tgaaatcgtc aaacgcttgg
     3601 atgaaggctt gaccaatcaa ataccagata aacaaactcg cattaaccac attttaaaaa
     3661 atcaagtttt tggaagtact gccacgtatg taggtagctt tgaccgatat ttgcataaaa
     3721 actcctttgc tggtgaaagg aattattttg ccaattttaa aatatttctg gcaccaaata
     3781 gtacaatgac aaagacaatc atgccaatga ttaaatcagg atagctagaa tgagtcaata
     3841 acgtcaatgc tcccgccgct atcacaccga tattgatgat aatgtcattg gatgtaaaaa
     3901 tcatgctggc tttgatatgg atttctttat tttgattttt gctcagtaga tataagcaca
     3961 gccagtttgc aatcaatgcc aaaaatgccg tgccaatcat cagttgataa ttgggcagct
     4021 gctcagcacc gataaaacgc ctaatcactt ctatcacccc aaataacgcc aatattatct
     4081 gcgttatccc cgccaaaaat gccacacgtt ttttatacgc catcgtcata ccaatggctg
     4141 atagcgccaa tatatagaca aagctgtccg ccagcatatc tagactatca gcaatcagcc
     4201 ccatagaatt agcaaaaata ccaaccgaac actctatgat aaaaaacaca aagttaatca
     4261 tgagcacttg atataataat cttttttcta agtgctcatc aggcttgtta aacactatct
     4321 tatcaacaat cacttcggtg gaaatgatat gactatcaaa attaagcggt tcaagtactt
     4381 gtaaaatcgt tgtatcttga ttatcgtgat agacggttaa gcaccgccca gcaatatcaa
     4441 actgtaattc ataaatatca gacacatctt ttaaacgcat gcgaatgagc tgttcttcgg
     4501 acgggcagtc cattttggta atgttaaaaa tggtcttttt catctattta gttccttgtt
     4561 ttgatcaggt tggctcaaat aaatctgtgt ttatattgct gcttggtaat ttttggatgg
     4621 tttgagtaaa ttgattaggt taaaatttac ctttggaagt accgccacgc ataatagttt
     4681 agatatgttt ataatctctg gataaaaaaa cgtaataagt gcttactgga taacaaagtc
     4741 caaaccaata gcaggcaaaa taaggcatcc accccccttc ttcattaagg atatatattg
     4801 agaaacaaat cgcaactaaa cagaaaaaac ttgggagata aagccatttc attcccctat
     4861 tcaagaatct agccaagata ggtattttgt attctacaaa aaagaaaggc atttccaagg
     4921 gaaacatgtc agataaaaac ttttgtttat tttttactat agatagaacc ttgcttctca
     4981 agagaaagcc attaataata ccgatgacag ctattaatat atagagaata gtataagtat
     5041 gaataatctt cattagacaa aaagaagaaa tggcagataa attacatacg atatattgga
     5101 atataaaata tttacggtct aaaccttgtt cagttgcaat ttttttatac ttaccttgcg
     5161 caaaaaaatc aaagaaatcc attaaactat ctttcacatt agaaatttaa aagctaaata
     5221 atacgacaaa caatgtgaag tactattcat ggtttattta aaaaataata ctattctgaa
     5281 cattatttag atacagaaat taacaaatta gaactaaaca agcttttaaa tactttaatt
     5341 ttattggaaa gctataaaag gaactataac tttacacact agtcacttct ttttaagagg
     5401 caaaagggat tgggaaggtc gtcttggaga taagcactgg tatttcggcc aatggtaaat
     5461 agagtttacc tcaaataggg tagaacctcc ttcatctgtc agttaataac agccactttt
     5521 acaatgccct gtcgaaataa agtggcacgc ccgatttttc actcataccg attaaataat
     5581 ccatcgtctt ccgagggaac gcgatgccgc gcaccacggt cagattcctc aaaacgggga
     5641 aaaccaaaat atcctccata ccgattccgc cgttgatgcc gtctgaagca ccgtccatca
     5701 aattttccaa ctcttgcaaa tctgcgttta tccgttcgag gtattgggcg gttttattca
     5761 aattggcgga aaagctgccg atgcttttct cttttttgtc tgtaaaatat ttcaccgctt
     5821 ccggcgttgc aaattcaggc agcccgattt tgatcacgcg cggctgcacc agtttgtcgt
     5881 tgtatccgcc caccttgtcc agccacgccc gtatctcggg gcggacttcg tctttcagac
     5941 ggtcttcgcg gtcgaaatgc cgcacaatgt ccaaactctc gcccataaac gaaccgtctt
     6001 ctttttgcag gacgggcact tgtttcgcac cgatcatacc gatcggcgtt gcctcgtcgt
     6061 cgtttgccag cacggcttct tcaacgtccg cgccaaacag cccggcagcc atccgcgcac
     6121 gcacgcaaaa cgggcaatgg tcgtaaatat acagtttcat caaaatattc ctcgtcaacc
     6181 tgtcggtacc ggctacctta acaccccgcg ccacccgaaa caagtttatc ttcccgccta
     6241 tgcaccgtaa ataaataa
//
LOCUS       DAWGBY010000108         6217 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.108, whole genome shotgun sequence.
ACCESSION   DAWGBY010000108 DAWGBY010000000
VERSION     DAWGBY010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6217
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.108"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            100..273
                     /locus_tag="WHG62_001691"
     CDS             100..273
                     /locus_tag="WHG62_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725773.1"
                     /translation="MSWWEFRGFWGILQRSQTVKLAQKWEQEQKKQQIQQKKETEKSP
                     KHKASRDDWEMER"
     gene            complement(355..2442)
                     /locus_tag="WHG62_001692"
     CDS             complement(355..2442)
                     /locus_tag="WHG62_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ1725774.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLA
                     ILQQLISLLQAWVGMHLSTTLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAVFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
     gene            complement(2445..3710)
                     /locus_tag="WHG62_001693"
     CDS             complement(2445..3710)
                     /locus_tag="WHG62_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ1725775.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKLEQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            complement(3677..3891)
                     /locus_tag="WHG62_001694"
                     /pseudo
     CDS             complement(3677..3891)
                     /locus_tag="WHG62_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235355.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4931..5167)
                     /locus_tag="WHG62_001695"
     CDS             complement(4931..5167)
                     /locus_tag="WHG62_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ1725776.1"
                     /translation="MKELHTSELVEVSGGKFHIFAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGISKKW"
BASE COUNT         1965 a         1104 c         1085 g         2063 t
ORIGIN      
        1 tcacttgatc caacttcaat agtgggaaac ggtcgatgtg tctggcaatc atggcttggg
       61 cggtttgctg gaagaaggtg ctcatggaac atcccctaaa tgtcttggtg ggaatttagg
      121 ggattttggg gaattttgca aaggtctcag accgtgaaat tagcccaaaa atgggaacaa
      181 gagcagaaaa aacaacaaat tcaacagaaa aaggaaactg aaaaatcgcc aaaacacaaa
      241 gccagtcgtg atgattggga aatggaacgt taaaccgcta ttttcatgta ttctattaaa
      301 ttatttgaaa aaagacttca ctttttgtta aagaaaaatg aagtcttgtt ctgttcaacc
      361 taaattcaga attttatctg ccgattgaat tgtttcttgg cggtgtgcaa ccattatttt
      421 cataatacca agacttttta ggttatggtt aattttttgt tcattttcta catctaaatg
      481 gctacttgct tcgtctaaaa atagaatttt gggtcgttta tacaatgcac gagccaagat
      541 aactctctgc ttttgtccac ctgataagat atttcccata tcgccaatca aggtctcata
      601 gcccattggc attttaagta tatcgtcatg tatttgtgcc atttttgcac attgttcaat
      661 gagctccata tttgggcttt catcaaaaaa tgaaatattt tccccaatag aacctgcaaa
      721 aaggacatca tcttggcgaa caatcccgct caatccccta ataaaggatg gagaaacttg
      781 atatatatca tgcccattaa tactaactgt accagtttca ggttttaggc tacctgttaa
      841 aatgtttaac aaagtggact tcccccgacc agattgtcct gttaaaacaa ctgcttcatt
      901 atctttaaat tccaaattaa tgttttcaaa aagatatggc tcattatcag catatctgaa
      961 tgagacgttt tcaactttaa gaaccagttg ttcattatct aatttaggta tatgattata
     1021 cttaataatt tcagtttctg tttcatttaa agtaatgtca gccaaacgtt cagcatgaag
     1081 ccctaacatt ttgatttgga tgtattggtc aacgagagaa gctgttctgc tttcaaattg
     1141 ccctttataa gccaaaaaag ccatcagaac accgactgta aatgaaccat ctaaaattgc
     1201 gcttgcacca agataaatta tgataatatt ttccatgcta aacaacagtt tatttgaaaa
     1261 ttcaaataaa gcagagagtt tatctgttgt cagcttggta ttgactgtat tcacaaatag
     1321 gctcatccaa gtgccatgtc tttgataatg tttatcaaat aatttaactg attggatacc
     1381 acgaatggtt tccatgaaat atgagttttg tttggcttca tgaacaatat tttcttctgt
     1441 tgcatttctt aatgggtaat atgcaagcca acgaattagt atgtacaaaa caagtgttaa
     1501 aagaacaatc agcgataatt gagtgctgta aattgtcatt aacacgaaag taaaaacagc
     1561 cattaagcta tttaaaacta aaacaaaaaa agtagaagtt agtgtttctt ggatatgatc
     1621 tattgaacca aatcttgaaa tcacatctcc taaatgtcgt ttactgaaat agtcattagg
     1681 taagtcaagt aaccttttaa atatattggc tttccattgt aaattaagag ttgtagatag
     1741 gtgcatacct acccatgctt gtaacaggct aattaactgt tgcaggatag ccagtaaacc
     1801 aaatcccaaa gtaagggtca gtaataaatt tttatcagca gttacaatga catggtctat
     1861 tacccattgc ataaagaatg gactaaccaa tgcaaagact tccaaagaaa tagctaatat
     1921 aagcatttga attaaagagc gttttaagcc tgaaatcccc cttaatagag ataatatttt
     1981 gattttcttt gtttcttttt tctcttcaaa atgggtattg gggaataatt ctagggcaat
     2041 ccctgtgaat ttttgtgaaa cttcgtccat tttgattttt cgcataccga cagcagggtc
     2101 cataatgacg atactgtctt tggaaatgga acaaagtaca acaaaatggt ttaagttcca
     2161 atggagaatg cagggtagtt gtaaatttga cagctcatct aactctaaac gcaaagctcg
     2221 tggcgttaaa ttcatttcat tgccaaatct catgatgtct gcaagatttg cgccctttaa
     2281 tgacagggtg tatttttggc gtaacgttct taaatcagtg tgaaagccat aataggacaa
     2341 gatggatgtc aggcatgcta aaccacattc agcaacttct gtttgcagaa tgacaggtag
     2401 ctttttgtta aatccaaagg acagtcttga taaataatcc atttttaatt gatttttcct
     2461 gaaatgctgt aaagtgggtc aagtacccat tcgtacaatt tttttcgttc atggagaata
     2521 tctgcttcta aaatcatgcc aatttgaagc ggcttgtttt ctccgtatgc tttaatcgtt
     2581 tgtttttcca atttaacttt cacaagatag gcaggttcat ttaataaggt tgggttagtg
     2641 aaaatgatac ctaaacctga tagctcttgt ttaccgagag cagttctggc aactgaaata
     2701 atttctcctg tggcatgtcc aaatttttgg taagggtacg cttggtaacg taaaacaact
     2761 ttatctttcg gtttaataaa accaacagct ttactgggta tgtaaagatt ggcgaccaat
     2821 tcagtttgtt cagggacaat gcttaacagc aatttagacg gttcaacttg ttgccctata
     2881 tcaacattaa ttgttgatat ataacctgat ttactagctc gtatggtttg ttcggatttc
     2941 aaatcaaaat ccaaaatttc ttggttcatt tccgtaatcg cacggttgag ttggctcaat
     3001 tcggttttat ggcgttcagg caggctgctt aatgtaattt tctgttcatc aagttccctg
     3061 attgcattat tttgttcaag ttttaggctc tccaaacgtg agcgttgttc caataaatgg
     3121 ctttcggcgg tcatcttatc ttgttgggat actgcgcctt gactggctaa aaacttgttc
     3181 ttgttaaggg ttttttccgc taaacgaatt tgacgatttt gccctgtaat ttgctgttta
     3241 atattctcta attgattgtt taaacgatga atgttgttat gaacattttt ttgctcattt
     3301 tgatgaatgc gctttaaacg ttccaattct tgtaatgcca aagttttttt aaggttggct
     3361 tctgctgcca atttggcttg tacgtttcct ttttcgccaa aacgcgatgt ggaaagtttg
     3421 aacaatggtt cgccagcttt gacaaagtta ccatcttcaa caaatttatg cgtaatcgtg
     3481 ccgatatcgg aagagtaaac acgaaccacc cccatagttg gaagtaattg accttcaacg
     3541 gttgttttat tggtatagct accaaaaatc aaaaagataa tgatacacag agcaatgaga
     3601 aaagcgcaaa aagtcagaaa taaaaaagag aatggacggg tcaagataac ctgacctgtc
     3661 cacttatttt gttgggctac aaagacttct tttcggaata agtgggacat ttattattat
     3721 ttcttaaaaa aatggataga aaaacaccaa taattaaata cttatgccta ataacataaa
     3781 tttgctattg attgatgttt ctattttaat tacattaaat ttaaccaata atccagaaat
     3841 ggttgcagct aaaatgcaaa agacagtggc gtaaatggtt tcagtattca taatttttct
     3901 ctttcaaaat tgttcaatct aaatagaaaa aggtaacttc aatacatatt gctgtaactg
     3961 aaattacctt ttccttaatg atgtaattat cttatggctt catcatgcca cgaccgatat
     4021 tgtatccgcc agcagcagag aaaataccag ctccaattgc gccaacccag cctactggtc
     4081 ctgtccactt gttccgttga gctacaaaga cttctggtct gaaaaatgag tgattgttag
     4141 acatgtgtac ttatttatgt ttctttgatt gggataaatt tgtaaaaaca aaaaaaaggc
     4201 aagttgttat tatagaagaa cttaaaatgc ttaacatact cattgaggtt tgtaccacat
     4261 aatgagatac gagataattt gttgggagta aaatcaaaaa aagattaaat atttaaaata
     4321 atcactatat tttttcatta tttgttcctt tttgtattta agttcttatg aaaaactagg
     4381 gtattttgaa tagaaaatat caaaataccc tagttttatt aaggaatatt accaccaaca
     4441 agtgcttcca tattgtacag caccagtgat tgcaccacca atagctccga atttcgcacc
     4501 tggaatagca ccaataccac ctgcaaatga accaacaatt gccccaccag ctgctccacc
     4561 taatgcacta ccaatggtat tttttgagaa atcacgccag ttacaagcag caccagaaac
     4621 ttattgaatt tcattcaaag tcaaaacttg cataatattc acctttgtta agtgtggttg
     4681 agaaaaaagt aaattttcat cgttactcat tatttgcaat catgcatata ctgtaaccaa
     4741 gcactatatt cagttggatc atagtttttc ctactgggtt gtctgatatg actattggca
     4801 ctattggcac aattgggatt agcaacttta ttgtgagtac ctaatggatt gatatttcct
     4861 gtaaagtggc tattgcatgc gcttaatgag catagattta ttaatgtcag aaaggataaa
     4921 acaaaaaatc ttaccatttt ttactaatac caaaagtagg tttcgaaaac tgtacaccaa
     4981 gaccttgtac atatccaaat tgcttgctaa cagaaaactc tactccacta ttgttagggg
     5041 aataggaagc accaatttta ccaacagcaa ccatatcttt tttacctagg ttgccgccac
     5101 cctgtgcaaa gatatggaat ttgccacctg acacttcaac taattcagag gtgtgtaact
     5161 ctttcatgat tttctcctgt aaagaagtat ggttggaaat gtaaatcaga attaaccttt
     5221 cttaagttta atttaatact ttttttgcaa gtattttatt ttaaattaaa tcaatatttt
     5281 aaaaatattt acttgtatac tgaatattta cttgtatact gaaaaagaaa ctcctaatgg
     5341 tggagtgggg cttttgttta agtaagcatt gaaaaaattt aaatttccca ttatgattaa
     5401 cttaatgcaa gagctttttc aggacgtaca aaccagcgaa cgggcgttct gatgtgggca
     5461 ggttggttgt cgctaaccaa tttcagtagc tcaatcgtca gattggtatc cggccctatc
     5521 aagctaagga gaggctgcgg ctactacaca aagcacctga aattattggg tgcttttgtc
     5581 tttttatggc attgtaccaa tttgtgtacc acgagggctt gttcgaccaa acgcggtaac
     5641 aactgaatac acactttccc cctcaacttc tttgcgttct aaaacgactg tcccaatccg
     5701 agaatagaca atcataggac gatgattgcc ccttacatca ctaaattcac taaaaatttt
     5761 tgcgcctgat tgaaaaatca tttccacata aaagggttac acctgtttca tcgtggctta
     5821 atccaaaccg cgttaaatct gctttgtgtt ctgccaaaat gtgaatcaca ccaaagccgt
     5881 gattaacctt tttgtgttcg ccgtgtttta aaacaatttg acctgccggg aagtctgctc
     5941 tattgttcgg acaatagggg gaatatacca attactttaa ctacatcatt ttttgacatt
     6001 tttcttgcct ttcaatttaa aatccaaaat catactgcca taatttagca atccaaaaaa
     6061 atttaggcag cagtcatggt ttcgtatttt agaaaacgaa acttggtttg gtgttttgaa
     6121 gcatttcagt acacaaacat ggaattttaa attgtcttgt gttgccttga tttaggatgt
     6181 tccagttttt taataaatag tttggggctg tcctaga
//
LOCUS       DAWGBY010000109         6169 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.109, whole genome shotgun sequence.
ACCESSION   DAWGBY010000109 DAWGBY010000000
VERSION     DAWGBY010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6169
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.109"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(99..2324)
                     /locus_tag="WHG62_001696"
     CDS             complement(99..2324)
                     /locus_tag="WHG62_001696"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ1725777.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFTRHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKHP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGDKLAAAGVNVNNGFGNLLANLDKLDADTRTAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAEGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAADIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
     gene            complement(2391..2531)
                     /locus_tag="WHG62_001697"
     CDS             complement(2391..2531)
                     /locus_tag="WHG62_001697"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/arginine repetitive matrix 2"
                     /protein_id="HEZ1725778.1"
                     /translation="MPPHIRHSTSDTAAKSGKTISPFLSRRRVQTRQDRTKREQSRQN
                     MP"
     gene            complement(2554..2658)
                     /locus_tag="WHG62_001698"
                     /pseudo
     CDS             complement(2554..2658)
                     /locus_tag="WHG62_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            2758..3873
                     /gene="lst"
                     /locus_tag="WHG62_001699"
     CDS             2758..3873
                     /gene="lst"
                     /locus_tag="WHG62_001699"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HEZ1725779.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTGNLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            complement(4037..4495)
                     /locus_tag="WHG62_001700"
     CDS             complement(4037..4495)
                     /locus_tag="WHG62_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ1725780.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            4614..5435
                     /locus_tag="WHG62_001701"
     CDS             4614..5435
                     /locus_tag="WHG62_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ1725781.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPNMVARGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDEKAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            complement(5486..5932)
                     /gene="yciA"
                     /locus_tag="WHG62_001702"
     CDS             complement(5486..5932)
                     /gene="yciA"
                     /locus_tag="WHG62_001702"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ1725782.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIAQGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPILAGLLPTP"
BASE COUNT         1335 a         1374 c         1814 g         1646 t
ORIGIN      
        1 atatccaatg ggtgcggcgt ttaatcataa tcaggcagat agggataact aatgccgtct
       61 gaacgacgaa tgttcagacg gcatttttac ctttgtgctt ataaggcgtt tagtgcctga
      121 ttaaaggtta cgctcggacg catcacttgt gcggcttttt caggattggc ggcgtagtag
      181 ccgccgatgt cggccgcttt gccttgtacg gcggaaagct cggcaacgat tttcgcttcg
      241 tcggcggtca aagcggctgc caatggcgta aatgcggctt tcagttcggc atctttgtct
      301 tgcgccgcca attcttgcgc ccagtagagg gtgaggtaga aatggctgcc gcggttgtcg
      361 agttcgccgg ctttacgttt aggcgatttg tcgttcaaca gcagtttttc ggtggctgca
      421 tccaaagtgt cggcgaggac ttgggctttg gtgttgccgg ttttttgcgc cagatgttca
      481 aacgatacgg cgagtgcgag aaattcgccc aaagagtccc aacgcaggtg gttttcttcg
      541 aggaattgtt gaacatgttt cggtgcagaa ccgcccgcgc cggtttcaaa cataccgccg
      601 ccgttcatca atggaacgat agacagcatt ttcgcgcttg tgccgagttc caaaattggg
      661 aacaagtcgg tcaggtagtc gcgcaagaca ttaccggtta cggagatggt gtcttcgccg
      721 tttttcagac gacccaagct gaacttggcg gcttcttcag gagcgaggac gcggatgtcg
      781 aggccattgg tatccagttc ggcaaggtag gctttaacct tggcgagcag gctcttgtcg
      841 tgcggacggt tttcatcgag ccagaacacg gcaggcgtgt tgctcaggcg ggcgcggttg
      901 acggcgagtt gcacccagtc tttgaccgga gcgtctttgg tttggcacat acgccagatg
      961 tcgcctgctt caacgtcgtg ctgcatcagg acttttcctt ccgcatcaat gacttgaacc
     1021 tgaccgtcgg cttcgatttc aaaggttttg ttgtgcgagc cgtattcttc cgccgcttgc
     1081 gccatcagtc cgacgttggg cacagtaccc atggttgtcg ggtcaaatgc gccgtgttcg
     1141 cggcagaagt cgatggttgc ttggtaaacg ccggcatagc tgctgtcggg aatcacggct
     1201 ttggtgtctt gcgctttgcc gtttttgtcc cacatacggc cggaattgcg aatcatcgca
     1261 ggcatagagg catcgacgat gacatcgctg ggaacgtgca ggttggtgat gcctttgtcg
     1321 gaatcaacca tcgccaaatc ggggttggca gcgtaaacgg cggcgatttc ggcttcgacg
     1381 gcggtgcggg tgtccgcatc cagtttgtcc agattggcaa gcaggttgcc gaagccgttg
     1441 ttgacgttga cacctgcggc agccagtttg tcgccgaatt tttcaaaaac aggcgcgaag
     1501 aacactttga cggcgtgtcc gaagataatc gggtcggaca ctttcatcat cgtggctttc
     1561 atatgcagtg agaacaatac gccttttgcc ttcgcgtctt tcacttgttc ggcaaggaag
     1621 gcgagcaggg cttttttgct catcacggtt gcgtcgatga tttcgccggc tttcagggca
     1681 acaggcgcgc gcagctcttt tttattgcct tgtttgtcgg tgaacacgat ggatacggaa
     1741 gtcgcttcag gtacggtaac ggattgttcg ttatggaaaa agtcgccgct ttgcatggtg
     1801 gcaacgtggg ttttggagtc ttttgtccat gcgcccatgc tgtgcggatg ttttttcgca
     1861 aagtttttca ctgctttagg cgcgcgacgg tcggagttgc cttcacgcag gacagggttt
     1921 accgcgctgc ctttgatgcg gtcgtagcgt tcgcgcacgg ctttttcttc atcggtttgc
     1981 gggtcggcag gataatcggg aacggcaaag cctttagact gcaattcttt aatcgcggcg
     2041 gtcagttgcg gtacggatgc gctgatgttc ggcagtttga ttacgtttgc atcgggttgt
     2101 tttaccagtt cgcccaattc ggcaagcgcg tcgggtacgc gttgcgcttc ggtcagatat
     2161 tcggggaatg ccgccaaaat acggccggac agggaaatgt cggcagtttt gacatcaata
     2221 tcggcgtggc gggtaaaagc ctgcacaatc ggcagcagcg attgggtcgc cagcgcgggg
     2281 gcttcgtcgg tatgggtata aacaatggtg gatttttgag tcataggatt attctcttgt
     2341 aggttggttt tttcttttgg aacacattgc gcggggaatg tgcgtggcta ttatggcata
     2401 ttttggcggc tttgttcgcg ctttgttcga tcttggcgtg tttgaacgcg gcggcgtgaa
     2461 aggaaggggg aaatggtttt cccgcttttg gcggcggtgt cggaggtgct gtgcctgatg
     2521 tgcggcggca tattttcggt gaaattgatt ttatagtggt ttaaatttaa accagtacag
     2581 cgttgcctcg ccttgtcgta ctgcttgtac tgtctgcggc ttcgtcgcct tgtcctgatt
     2641 taaatttaaa ccactataat attcggtaac tgtcggaata tctgctaaaa ttccgcattt
     2701 ttccgcccgg gacactcggg gcgtatgttt aatttgtcgg aatggagttt tagggatatg
     2761 ggcttgaaaa aggcttgttt gaccgtgttg tgtctgattg ttttttgttt cgggatattt
     2821 tatacatttg accgggtaaa tcagggggaa aggaatgcgg tttccctgct gaaggacaaa
     2881 ctcttcaatg aagaggggga accggtcaat ctgattttct gctataccat attgcagatg
     2941 aaggtggcgg aaaggattat ggcgcagcat ccgggggagc ggttttatgt ggtgctgatg
     3001 tctgaaaaca ggaatgaaaa atacgattat tatttcaatc agataaagga taaggcggag
     3061 cgggcgtatt ttttccacct gccctacggt ttgaacaaat cgtttaattt cattccgacg
     3121 atggcggagc tgaaggtgaa ggcaatgctg ctgccgaagg tcaagcggat ttatttggca
     3181 agtttagaaa aagtcagcat tgccgccttt ttgagcactt acccggatgc ggaaatcaaa
     3241 acctttgacg acgggacagg caatttaatt caaagcagca gctatttggg cgatgagttt
     3301 tctgtaaacg ggacgatcaa gcggaatttt gcccggatga tgatcggaga ttggagtatc
     3361 gccaaaaccc gtaatgcttc cgacgagcat tacacgatat tcaagggttt gaaaaacatt
     3421 atggacgacg gccgccgcaa gatgacttac ctgccgctgt tcgatgcgtc cgaactgaaa
     3481 gcgggggatg aaacgggcgg cacggtgcgg atacttttgg gttcgcccga caaggagatg
     3541 aaggaaattt cggaaaaggc ggcaaaaaac ttcaacatac aatatgtcgc accgcacccc
     3601 cgccaaacct acgggctttc cggcgtaacc acattaaatt cgccctatgt catcgaagac
     3661 tatattttgc gcgagattaa gaaaaacccg catacgaggt atgaaattta tacctttttc
     3721 agcggcgcgg cgttgacgat gaaggatttt cccaatgtgc acgtttacgc attgaaaccg
     3781 gcttcccttc cggaagatta ttggctcaag ccggtgtatg ccctgtttac ccaatccggc
     3841 atcccgattt tgacatttga cgataaagat taatcgcata gcaaatcaaa atagaaaatg
     3901 gcggagtaag taaggcaaaa atcaggatat ggcgtatttt ttgaattgac gataatttct
     3961 gattgctttg cgtgtgctga aatggcaaag aaaatgccgt ctgaaggctt cagacggcat
     4021 tgttctgttt cggatgttat tcgggtgcgc ggaaactgtc gtggcaggat ttgcagcttg
     4081 cgccggtttc gccgtaggcg gctttgattt catccagttt gccggtttgt gctgcggcat
     4141 tgagtttttc gacggcggcg gcgaattttg ttttttcggc ttcaaatttt gcaccatccg
     4201 accaaacggc tggcagggcg cggccgttgc cttgcggatc ggactcaaaa agtgtgaacg
     4261 gtttcttgct gctttcggca aacgccgcgg cagcctgttt gaatttttcg acatcgtaag
     4321 gctcttcgcc tttgaccatt ttgcccatac gcgagaagtc gggcatcata gatttgaacg
     4381 cggcggtgcg gttttcggaa atttcgcctt tgggttggga aggtattccg ctgcctccgc
     4441 aggcggaaag gagcagtgtg atggcggcag cagcaaggct gatttgggtt ttcatattga
     4501 atgtgtcctg tcgtggtggt atggttgttg tcattttcag ccggcgcgat gccgtctgaa
     4561 gagcgttatg atacctgaaa caggtttggg aaacgagaaa gaaaggaaaa acaatggctg
     4621 ttttaattac cggtgcttcg gcaggattcg gcgaagcgat gtgccgtgcg tttgtcgggg
     4681 cgggataccg cgttatcggt gcggcgcgcc gtgcggacag gcttcaggcc ttggcggatg
     4741 aattgggtgc tttgttttac cctttggaaa tggacgtgtc gcgacgcgag tcggtggaaa
     4801 acgccttaaa cggcatcccc gatgaatttt ccgacatcga ctgcctcatc aacaatgccg
     4861 ggctggcttt gggtctggac acggcggaca aggcggattt tgaagattgg gaaacaatga
     4921 ttcaaaccaa tgttttgggt ttgacgtttc taacgcgcaa gattttgccg aatatggtgg
     4981 ctcggggcgg cggttatgtg atgaatttgg gttcgattgc aggcaattat gcttatgccg
     5041 gcagcaacgt ttacggggcg accaaggcgt ttgtgcgcca gttcagcctg aatttgcgcg
     5101 cggagttggc ggataagaac atccgcgtta ccaatatcga gccgggtttg tgcggcaata
     5161 cggagttttc caacgtgcgc ttcaaaggcg atgacgagaa ggcagcaggc gtgtatgagg
     5221 gtgtggaatt tatccgcccc gaagatattg cggaaaccgc attgtggctg taccgccggc
     5281 cggcgcatat gaatgtgaac acgattgaaa ttatgcccgt ggcgcagact tttgcaggaa
     5341 tgaaggtgat aaaaaaagcc gtgccggaag tgcgggaaga ctttgaaaaa cagagtatgt
     5401 cgctgttttc ccgcatcaga tcttggttca aatgatgcgg aatgccgtct gaagacagtt
     5461 tcagacggca tttttacggg catttttacg gagtaggcaa taagcccgcc aatatggggt
     5521 tgccttcttt cggaatcggg cgcggattgc cttccgcatc gatggcgaca taagtgaaca
     5581 cggcttcggt tacgaggtgg cggtcttcgg taacgcaatc gttcatcaaa gttttcaccc
     5641 agacttcgac tttaagctgg agggaagtat tgcccacgcg gacgcaatgc ccgtagcagc
     5701 agacgacgtt gccgaccttg accgggcgga tgaagttcat ttcctgaacg gcgacggtaa
     5761 cgatgcgtcc ttgtgcgatt tccgctgcca atatgccgcc gcccaaatcc atctgcgaca
     5821 taatccagcc gccgaaaatg tcttggttgg gattggtatc gcgcggcata gcgacggtac
     5881 gcaggagcag ttcgccttga gggcgttggc ggttgccttc ttcgtgctgc ataaagtttc
     5941 cttgttttat tgaaagataa atcgaacctg cacccctgcc cgaaacggga agtcgggaag
     6001 tgcgtagttt aacccatttg agacatacaa gggcgggcgt gggacagatt cgcaaggcgt
     6061 attgtagggc ggggctgtag agtgggcttc agtccgccaa tcccgccaaa tcctacccta
     6121 agcaactgaa ccgtcattcc cacgaaagtg ggaatctaga atctcgggg
//
LOCUS       DAWGBY010000110         6092 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.110, whole genome shotgun sequence.
ACCESSION   DAWGBY010000110 DAWGBY010000000
VERSION     DAWGBY010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6092
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.110"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(69..2075)
                     /locus_tag="WHG62_001703"
     CDS             complement(69..2075)
                     /locus_tag="WHG62_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ1725783.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            2364..4391
                     /locus_tag="WHG62_001704"
     CDS             2364..4391
                     /locus_tag="WHG62_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ1725784.1"
                     /translation="MSLSEFIERRTSFNLMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEIIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(4483..6036)
                     /locus_tag="WHG62_001705"
     CDS             complement(4483..6036)
                     /locus_tag="WHG62_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ1725785.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
BASE COUNT         1255 a         1426 c         1861 g         1550 t
ORIGIN      
        1 ccttttatgg ggatttcccg catcagggcg gtattcgggg cgaatcccgc ttcagacggc
       61 attgccggtc aaggcttgtc cgaaggagga tgtccctgtt ctttggcggg cgggaggaaa
      121 agtatgcagg gattgctttt aatctgattc caaaaactct taatcagatt gcggatgctg
      181 ccgattttcg tgccgcgcga gcgcagggcg acgaagaggg cgaggctgaa gctgacgcag
      241 aggttgacca ggccgatggc gaggacgctg aaaatgccga gtacgaacgt gcccaaaccg
      301 acgttgccgc tgacggcggc atagccgagg ttggcggagg aaaaggcgac gtggcggatg
      361 tccagcggca gcccgaggag gtgtccgaaa tagccggtca tacccaagag catcccgaag
      421 atgaagttgc ctgccaacga gccgtagtgt ttgtggatgt aggcggcgag gacgcggcgg
      481 ggcccggggc gcatgatttt acgcagcaag gggttgaagg gcaggcgttg gcgcaggttg
      541 aggtagtcgg cgcggttgtc gaaaaaacct gcgatgatgc cggagcagaa cagccacaga
      601 cctgcaatgg cggcatacca cagcgtcggg taagcgatga tgtctatgga tttgaactgg
      661 taggcggcgg tgtgggcatc gagtatgggc tgccggtaca gatgggcata gccgaacgat
      721 atggcgcacg ccaaaaggat ggcgatggaa acgttgccga aaacggcgac actttgggaa
      781 cggcatacgt cgatgaggag cttggcgagt ttgttgtcca ccgctttgcc gccttcgttg
      841 agatcgacct gttcggcaaa gctggcggca gtcatcgcgg gctgtttggt ggcgacggtg
      901 cagtgcagca tatggatgat cataaagccg atgccgtagt tgaacccagc cgacaaggaa
      961 gtcaggaagg ggctgaggcc gagtgtgccg atgcggattt tgagcagcgc catcagggcg
     1021 atgatgatgc cgccgcctgc cgccgagtag aacattttga aatattcttt gcggttgcgg
     1081 gtaatgtagt gttcgccgtg gtggcttttg ttttcggtaa tgctgcgggc gagcatacgg
     1141 atgctgctgc ggcgcaggtg gcgggtgctg tattgttcga ccgccgcgta gatgagggag
     1201 ttcatcagcg cgatggtcag gcggttgctg ttgccggcgc cggtttggat gtcggtgagc
     1261 agcttcagac ggtctacggt ctgccggagc cgttcgagca ggtgggcgac tttgaccgac
     1321 gaaccggagc cggcgcccgt ccctttgcgg cgcaaatagt caatctggct gaaacattgg
     1381 tcgaacatca cttcgaggtg ggcggtgtcg taaggcgtgg tgccgttgcg gtagtgttcg
     1441 accagtttgg cggtttcgcg ttggagggcg acgaaggaag aatcggcttc cagcaggcgc
     1501 ggggcgatgc ggatgaggtc gggttcgatg gcttcggatg ccgtccagac agacagcatt
     1561 tcgatggcgc gcaaacgcgc atcggcaagg cggatgcccg ccgtctgcaa tttggacggc
     1621 tcggcgtggc tccggatgag ttcgtataaa accagccatt ggcggatatt gagcgtttgc
     1681 agccatttgt cgtcgttttc ggaatggaaa agataaagga agacttcgcc caagttggca
     1741 aaatctttat atgacgggct gaagcgttcg tagatgcgta tgcccatttc ccgggcaaag
     1801 ctgtggcgcg agaagatgcc gagtttgatg agtgccggat aaatgtgtat ttgcgcgagc
     1861 cagatgtaaa aacaccggct gaagcgggac agcaattccc tgtcttgttt gaatgtgtcg
     1921 ataatcaggt cgaaacgttc ccccgcacat tttttgccgc cacggcgcaa aaatttaatc
     1981 agtgcgttga ggacgttgac aaagtcggta tgtcccaagc tttccgaaag cagggggcgc
     2041 aggttttgag gggtaatttt cttcatatca gccattgtac cgcatcggca atccggcgtt
     2101 aaacgccccg atggcgggga gggcgcgcct gcggaaggcg gcgcattttc cgccggtttg
     2161 aaatcaaact atattaatga tataataaat atcgataaat caatctgata gaataatccg
     2221 tattgatttt taattttttc gattataaca atttcggccg gtttgtgcat ttcgtcatcc
     2281 ggaagccggt attttgccgg caggttttga ccgctttgcc cgatgaccgg gtttgtctgt
     2341 ttttaacaaa ggagtgagaa ggtttgtccc tgtctgaatt tatagaacgc cgaacgtcat
     2401 ttaatctgat ggttattttg acgactttgt tttttgtgtg tgttttggtg gtattggttt
     2461 taaccgtgcc ggatcaggtg cagatgtggc tcgatcgggc aaaagaaatc atttttaccg
     2521 agttcagctg gttttatgtt ttaacgtttt ccatttttct gggtttcctg ctgatactct
     2581 cggtcagcag tttgggaaac atcaggctcg gacgggatga agatgtgccg gaattcggct
     2641 tcctgtcgtg gctggcgatg ctgtttgcgg ccgggatggg cgtgggtctg atgtttttcg
     2701 gcgtggcaga gccgttgatg cattattttt cggacattac ggccggcacg ccggaacaca
     2761 ggcagcagca ggcattgctg cacacggtgt tccattgggg cgttcacgct tggtcggtgt
     2821 acggtacgat tgcattggct ttggcttatt tcggtttccg ctacaagctg ccgcttgccc
     2881 tgcgttcttg tttttacccc ctgttgaaag aaaaaatttc cggaaggttc ggcgatgcca
     2941 ttgatattat ggcgttgctt gctacttttt tcggcatcat caccacattg gggttcgggg
     3001 cttcgcaact gggcgccgga ttgcaggaaa tgggctggat tgccgaaaac agcttcagcg
     3061 tgcaggtttt gattatcgcc gccgtcatgt ccctcgccgt cgtttcggca atatccggcg
     3121 tggggaaggg cgtgaaggtg ttgagcgagt tgaacctgag ccttgcgttt ttgctgctgt
     3181 tttttgtttt ggcggcgggt cccactgttt acctgttgtc ggcattcggc gacaacatag
     3241 ggaactacct cggaaatctg gtgcgcctca gttttaaaac ttatgcgtac gaacgggaac
     3301 acaagccgtg gtttgaatct tggacggtgc tttattgggc gtggtggtgt tcttgggcgc
     3361 cgtttgtggg tttgtttatc gcgcgcattt caaaggggcg caccatccgc gagtttgtct
     3421 tcggggtttt gctcatcccc ggcctgttcg gcgttttgtg gtttaccgtc ttcggcaata
     3481 cggcgatttg gctgaatgac ggggttgcgg ggggaatgct cgaaaagatg acctcctctc
     3541 cggaaacgct gctttttaaa ttctttaatt acctccccct gcccgaattg acgagcatcg
     3601 tcagcctgct ggtcatttct ctgttttttg taacttctgc cgattccggg atttatgtcc
     3661 tgaacaatat tacctctcgg gacaaaggct tgagcgcgcc acggtggcag gcggttatgt
     3721 ggggcgtgct gatgtctgcc gttgccgttt tgctgatgcg ctcgggcgga ctcggcaacc
     3781 tgcagtctat gaccctgatt gtttccctgc cgtttgccct gctgatgctg ataatgtgtt
     3841 tcagcctgtg gaaaggcttg agtgcggata agaaatattt tgagacccgg gttaacccta
     3901 ccagtgtatt ttggacgggc ggcaagtgga aagaacggct ggtgcagata atgagccaga
     3961 cgcaggagca ggatatttta aaattcctca aacataccgc atcgcccgct atgcacgagt
     4021 tgcaacggga gctttcggaa gaatacggct tgagcgtccg ggtcgataag atgtttcatc
     4081 aggacgagcc cgcaatcgag ttcgtcattc ggaaagagac gatgcgcgat tttatgtacg
     4141 ggattaagtc tgtcgggcag gatgtatccg accagttgat taacgacggc aagctgccgc
     4201 atatccggca tcagacaact tacaaaccct acgcttattt tttcgacggg cgcgtcgggt
     4261 acgatgtgca gtatatgaac aaggacgagc tgattgccga cattttgaaa aactacgaac
     4321 gttatttgat gttgttggat gatgtcggtc aggaactgat ggcgcacgag caggtggaat
     4381 tggcagagta agtgccttat ctctggcgtt tgccaaaaaa aatgcggtga atcagattca
     4441 ccgcattttt tttgccggac ggggcttcgg acggcacggc gttcatttgt ttccgtcaaa
     4501 ctgctccttc aacacccgtt tcaatacctt gcccgtagcg ttgcgcggca gcccgtcttt
     4561 aaagtggatt tgtttgggga ttttgaaatt tgccagcacg gtacgcaggt ggcggcggat
     4621 ttcgttctcg cccaaatcca taccttcctt caattggacg aaggcgacga tttcctcgtc
     4681 ggcataacgg tctttcacgc cgatgacggc agcggcttcg acggcatcga gtttgtagat
     4741 ttcttcttcg atttcgcgcg gatagacgtt ttgacctttg gaaataatca aatctttttt
     4801 gcggtcgacg ataaagataa agccgtcttc gtctatggta acgaaatcgc ccgttttcaa
     4861 ccagccgttg acgatggttt catcggtggc ggcaggcata ttgaggtagc cccgcatcac
     4921 cgaaccgccc ctgacgatca gttcgcccac ttcgccgcgc ggcacttcga ccaattcttc
     4981 atcgacggct ttggcttcca aaccgggcag ggggatgccg acgctgcggg ctttttgcct
     5041 ctcgggcgta ttgacggcga cgacgggaga ggcttcgctc agtccgtagc cttccagcaa
     5101 tttggcgcgg gggaacttgg ctttgaaatc gaggatggtt tgttccgcca aaggcgcacc
     5161 gccgctgata aacaggcgaa tgcggttgaa ccatctgaaa taccaaggga ttttcgcctt
     5221 gctcattgcg gtgtaaatcg cgggtatgcc caaaaacacg gtcgcgcgtt tgagcagggc
     5281 ctgtttcaaa acgttggaaa acgggaaaac ggatttgacc aaaataatcg aacacgccat
     5341 ataaatcggc agcagcacca tagccgtcag cgtgaagctg tggaacatcg gcaggaaaac
     5401 gataaagcgg tcgcgcttgg agattttaaa gatgcgttcg atgccgttca ggttggcgaa
     5461 caggttggcg taactgatta gcgcgccttt gggatgcccc gtcgtgccgg aggtgtagat
     5521 gatgtgtgcc aaatcattta tccggggttg gcggcccaag tcgggttttt cggggaagcg
     5581 gcgcacgtct tcaaaaaagg catcgccttc cgccatttcg ccggccggac ggcttttgtc
     5641 cgtccaaatg attttttcga cgggcgtttg cgccttcaag cccgccaact cttttgacag
     5701 gcccgccgag gcgaacagga agcgcgcctt gcagtcgttc aggatatacg cgtattcgct
     5761 gtttttcaaa aatgtgttca tcggtacggc gaccgcgccg atggcggaga cggcgaaata
     5821 ggcggtaata aattctgtgg aattggaaac cgccagcgcg accgtgtcgc cgaacttcac
     5881 gccgatattt tgcagatacg ccgcgacggc ttcggcctcc tgcttgagcg cgcggtaggc
     5941 ggttttttcc ttgccgtcga acactgccgt gccgttgccg tttttgcggc aggcggcggc
     6001 gagcatttcg tagaaattgg cataagtccg gttcatgaaa cttcctttat ggttgcggac
     6061 ggcgaacgcc ctcatttgaa aacaatatgc cg
//
LOCUS       DAWGBY010000111         6074 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.111, whole genome shotgun sequence.
ACCESSION   DAWGBY010000111 DAWGBY010000000
VERSION     DAWGBY010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6074
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.111"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            25..408
                     /locus_tag="WHG62_001706"
     CDS             25..408
                     /locus_tag="WHG62_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEZ1725786.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            523..996
                     /locus_tag="WHG62_001707"
     CDS             523..996
                     /locus_tag="WHG62_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ1725787.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVEGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            1122..2225
                     /gene="mnmA"
                     /locus_tag="WHG62_001708"
     CDS             1122..2225
                     /gene="mnmA"
                     /locus_tag="WHG62_001708"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ1725788.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDDETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQTTDKPVIITR"
     gene            2296..3966
                     /locus_tag="WHG62_001709"
     CDS             2296..3966
                     /locus_tag="WHG62_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEZ1725789.1"
                     /translation="MKKIWLDSYEKGVSAEIDITQYNSVSDVFRQSVEKFADQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPVALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFVIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGQLKKQRVNVCIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            4078..5712
                     /locus_tag="WHG62_001710"
     CDS             4078..5712
                     /locus_tag="WHG62_001710"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ1725790.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDREMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAVKNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NKGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSGHIRERHRHRYEVNNNYVPQLEKAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            5727..5929
                     /locus_tag="WHG62_001711"
                     /pseudo
     CDS             5727..5929
                     /locus_tag="WHG62_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246312.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5940..>6074
                     /locus_tag="WHG62_001712"
     CDS             5940..>6074
                     /locus_tag="WHG62_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ1725791.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     Y"
BASE COUNT         1604 a         1643 c         1525 g         1302 t
ORIGIN      
        1 tgagaacatt ttgaaaggat accgatggaa ccttcctcct acgcggcaga aaaaaaaggc
       61 aaaggcggca tcaggcgcgt cattaacgca ttcggctatt cgatagacgg catcgccgcc
      121 gcctaccgtt acgaagcggc attccgtcag gttttgtggc tgaacgtact gctggtgtgc
      181 gcggcatttt tttgggtttc cgaaaccgcc gtccgcctgc cgttgattat cgcgtctttt
      241 gtgtcggtca ttgtcgaact gttcaacacc gccgtcgaag ctgccgtcga tcatacttcg
      301 accgaaaaac acgagctggc caaacgcgcc aaagacgcag gttctgccgc acaattgttc
      361 gcgatgctga tgttggcggc ggtttggctg tctgccctgt tcgggtaaaa cgcttgcagc
      421 aggatttgta atcctttagg attagtatgt ggtatttatt attcacttaa tccactataa
      481 gattaagcac attccccgtc tgatattata aggagcagaa agatgaaaaa attattggcg
      541 gccgtgatga tggcaggttt ggcaggcgcg gtttccgccg ccggagtcca cgttgaggac
      601 ggctgggcgc gcaccaccgt cgaaggtatg aaaataggcg gcgcgttcat gaaaatccac
      661 aacgacgaag ccaaacaaga ctttttgctc ggcggaagca gccccgttgc cgaccgcgtc
      721 gaagtgcata cccacatcaa cgacaacggc gtgatgcgga tgcgcgaagt cgaaggcggc
      781 gtgcctttgg aggcgaaatc cgttaccgaa ctcaaacccg gcagctatca cgtgatgttt
      841 atgggtttga aaaaacaatt aaaagagggc gacaagattc ccgttaccct gaaatttaaa
      901 aacgccaaag cgcaaaccgt ccaactggaa gtcaaaaccg cgccgatgcc ggcaatgaac
      961 cacggtcatc accacggcga agcgcatcag cactaatctg ctgaaaatat ttgaaatgcc
     1021 gtctgaaaaa gcccgggctt tcagacggca tttttatgac cgcctttaaa atgtgttaaa
     1081 atctgccttt aaaaaccgcc gtttccaacc atattctacg catgaatacg acagcaaacc
     1141 cttccaatat catcgtcggg ctctccggcg gtgtcgattc ttccgtaacc gccgccctgc
     1201 tcaagcagca gggttatcaa gtgcgcggtg tgttcatgca gaactgggaa gacgacgaca
     1261 acgacgaata ttgcagcatc aaacaggatt cgtttgatgc catcgccgtt gccgatattg
     1321 tcggcatcga catcgacatc gttaatttcg ccgcgcaata taaagacaaa gtctttgctt
     1381 attttcttca ggaatacagt gcggggcgca cgccgaatcc cgatgtgttg tgcaacgccg
     1441 aaatcaaatt caaatgcttt ttggattacg ccgtagggca gggcgcggat accatcgcca
     1501 ccggacacta tgcgcgcaaa gaagtccgca acggcgtgca ttacctgctc aaaggtttgg
     1561 atcgaaacaa agaccaaagc tatttcctct accgcctcaa gcctttccaa ctcgaacgcg
     1621 cgatttttcc gttgggcggt ttggaaaaac ccgaagtgcg ccgccttgcc gccgagttca
     1681 aactgccgac cgccgccaaa aaagacagca cgggcatctg cttcatcggt gaacgcccgt
     1741 ttcgcgagtt tctgcaaaaa tacctgccga ccgacaacgg taaaatggtt acgcccgaag
     1801 ggaaaaccgt cggcgaacac gtcgggctga tgttctacac gctcggacag cgcaaaggtt
     1861 tgggcatcgg cggcgcgggc gaaccgtggt ttgttgcggc taaggatttg acgaaaaacg
     1921 aactgattgt cgtgcaagga cacgaccatc cgctgctcta tacccgcagc cttgtgatga
     1981 acgatttgag tttcacgctg cccgaacgcc cgaaagcagg gcgttatacc tgtaaaacgc
     2041 gttaccgtat ggcggacgcg ccttgcgaat tgcgctattt ggatgatgaa accgccgagc
     2101 tggtgtttga cgaaccgcaa tgggcggtta cgccgggcca gtctgccgtg ctgtacgacg
     2161 gcgacatctg tttgggcggc ggcatcatcc aaacgaccga caaaccagtc atcatcacac
     2221 gataaaggta atgccgtctg aaacggtttt cagacggcat tgttccgctc aattccactt
     2281 taaagaccga tacctatgaa aaaaatctgg ttagacagct acgagaaggg cgtcagtgcc
     2341 gaaatcgaca tcacgcaata caattccgtc agcgacgtat tccgccaaag cgtggaaaaa
     2401 tttgccgacc aacctgcttt tcaaaacatg ggtaagacgc tgacttatgc cgaaaccggc
     2461 aaactggcaa cagattttgc ttcttatctg caaaacgtcc ttaaattgcc tcgaggagag
     2521 cgcgtggcaa taatgttgcc caatgtactg caatatccgg ttgccctttt cggcattttg
     2581 caggcaggtt tggtagcggt gaacaccaat ccgctctata ccccgcgcga gctggagcat
     2641 cagttgaaag acagcggcgc gaccgccatc atcgttttgg aaaatttcgc caacacgctg
     2701 gagctggtgc tgccgcgcac gcagatcaaa cacgtcatcg tcgcctccgt cggcgaaatg
     2761 ttcgggctgc ttaaaggttc gctgatcaat ttcgtcatcc ggaaaatcaa gaaaatggtg
     2821 cccgaatacc gtattcggga aaccgtttcc tttcagacgg cattgaaaga gggagcgaag
     2881 cacgttttcc aacctgtcgc attaaaccgc gaagataccg cgctgctgca atacacgggc
     2941 ggcacgacag gtgttgccaa aggggcggtg ctgagtcacg gcaacatctg cgccaatatg
     3001 cttcaggcaa aagaatggat taaaaaccag ttgcgtgagg gaaaagaaac cgttatcgcc
     3061 gccttgccgc tgtaccatat ttttgcctta accgtgaatc tgatgatttt tgccaatgcc
     3121 ggctcgaaaa tcatcctgat taccaacccg cgcgatatga aaggctttat cggacaactg
     3181 aaaaaacagc gggttaatgt atgtatcggc gtgaacacac tgtttaacgc aatggttaac
     3241 cgtcctgatt ttgccgaagt cgatttttca ggattgcggc tgactttggg cggcggtatg
     3301 gcgacccaaa aagccgttgc cgaaaaatgg aaaaaaatca ccggcacgcc catcgtcgaa
     3361 gcctacggtc tgaccgaagc cagccccggc gtgtgctgca accccttaaa catcgaatca
     3421 tacagcggca gcatcggttt gcccgtctcg tccaccgaag tcgaactgcg cgacgcaaac
     3481 ggcaaagaag tccccgtcgg gcagccgggc gaattgtggg taaaaggccc tcaagtgatg
     3541 caaggctact ggaaccgccc cgaagaaacc gccaaagcca tagacgcgcg cggcttcttg
     3601 gaaaccggcg atattgccgt catggacgaa aaaggctggt tgaagctggt cgatcgtaag
     3661 aaagacctcg tcgttgtttc cggattcaat gtttatccga acgaaatcga ggaagtcatc
     3721 gcgcatcacg gcaaagtcat ggaagtcgcc tgtatcggcg ttcccgacga aaaaaccggc
     3781 gaggcactca aagtattcgt cgtcaaaaaa gacccgtcat tgaccaaaga agaacttatc
     3841 gccttttgcc gcaccgaatt aaccgcatat aaagtaccga aaaatatcga attccgcgac
     3901 gagttgccca agtccaacgt cggcaaaatc ctgcgccgcg agttgcggca aagtaccggt
     3961 aaataaagaa aagatgccgt ctgaaaacag ccgtccaccg ttcagacggc atccgtccgt
     4021 ttgccagaac cgcgcgcttc acgttaaaat cacgcattcc aatatgggta ttccatcatg
     4081 accaaattca ttttcgtaac cggcggcgtt gtctcctcac tgggtaaagg tatcgccgcc
     4141 gcttctattg ccgccatcct cgaatcgcgc ggcttgaacg ttaccatgct caagctcgat
     4201 ccttatatca acgtcgatcc cggcacgatg agcccgttcc aacacggcga agtgttcgta
     4261 accgacgacg gcgcggaaac cgacctcgac ttgggacact acgaacgctt tatcgattcc
     4321 acgatgaccc gccgcaacag cttcagcacg gggcaggtgt acgaaaacgt catcgccaaa
     4381 gaacgacggg gcgactattt gggcggcacg gttcaagtca ttccgcacat taccgacgaa
     4441 atcaaacgcc gcatccacga aggcgcggca ggttacgatg tggcgattgt cgaaatcggc
     4501 ggtacagtcg gcgatatcga atctttgcca ttcttggaag ccatccgcca aatgcgcagc
     4561 cagctcggcc gcaacaatac attgtttgcc cacctgagct atgttcctta cattgccgcc
     4621 gccggtgaaa tcaaaaccaa accgacccag cataccgtta aggaaatgtt gagcattggt
     4681 ttgcaaccgg acatcctgat ctgccgtatg gacagagaaa tgcctgcgga cgagcgccgc
     4741 aaaatcgcct tgttctgcaa cgtggaagaa cgcgcgattg tgggcagcta cgacgtggac
     4801 agcatctacg aatgccccga aatgctgcac gaccaaggca tagacaacat cattaccgaa
     4861 cagttgcagc ttaacgtaca acaggcggat ttgactgcgt ggaaaaaaat cgtccacgcc
     4921 gtcaaaaatc cgaaacacac cgtcaaaatc gcgatggtcg gcaaatacgt cgatttgacc
     4981 gagtcctaca aatcattgat tgaagccttg aaacacgcgg gtatccacac cgaaaccgac
     5041 gtgcaaatta cctttgtcga cagcgaaagc atcgagaaaa acaaaggcga cgtttccatg
     5101 ctcaaagata tggatgccat cctcgtcccc ggcggtttcg gttcgcgcgg cgtggaaggc
     5161 aaaatcgccg ccgtgcgcta cgcccgcgaa aacaacgtgc catacttggg catctgcctc
     5221 ggtatgcaga ttgcgctgat cgaatacgcc cgcgacgtgg caggtttgaa aggtgcgaat
     5281 tccaccgagt tcgacctcaa atgcgccgcc cccgtcgttg ccctgattga cgaatggcaa
     5341 actgccgacg gcagcgtcga aacccgagac gagtccgccg atttgggcgg cacgatgcgt
     5401 ttgggcgcgc aagaagtcga attgaaagca ggcagcctcg ccgccaaaat ctacggcagc
     5461 ggacatatcc gtgaacgcca ccgccaccgc tacgaagtca acaacaacta tgttcctcag
     5521 ttggaaaaag caggcttggt tatcggcggc gtatccgccg gacgcgaacg cttggtcgaa
     5581 accatcgaac tgccgaacca tccttggttc ttcgcctgcc agttccaccc cgagtttacc
     5641 tccaatccgc gcaaagggca tcctttgttc accgcgtttg tcaaagctgc gttgaacaat
     5701 aaaaaagcct gataaagcgt tacttgatga tcaaaatgcc gtctgaaagc ctgaatgaag
     5761 actttcagac ggcattttcg caaatcgggg attataaaag ccatcaattt aatttttatg
     5821 gttttatcta atatttacca actgaatatt gttaagcggg gcgtgaaact caagttgaga
     5881 cctttgcaaa attccccaaa atcccctaaa ttcccaccaa gacatttagg ggattttcca
     5941 tgagcacctt cttccggcaa accgcccaag ccatgattgc caaacacatc gaccgcttcc
     6001 cgctattgaa gttggatcaa gtgattgatt ggcagccgat cgaacaatac ctgaatcgtc
     6061 aaagaacccg ttac
//
LOCUS       DAWGBY010000112         6051 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.112, whole genome shotgun sequence.
ACCESSION   DAWGBY010000112 DAWGBY010000000
VERSION     DAWGBY010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6051
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.112"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..957
                     /locus_tag="WHG62_001713"
     CDS             <1..957
                     /locus_tag="WHG62_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ1725792.1"
                     /translation="LEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAA
                     ANKGKCQDGAIGAVVGEIVGEALVKNTDFSGMTASEIEKAKANITAYAKLVAGATVGV
                     TGGNVDVAANASETAVKNNALDIIWDIGNLVWDGGKWIYAKSIGDKQMAREAAIDFGV
                     DAAAAAVPFVPAGATKISRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTYDKVNKVW
                     TTPAGLDYGLDAKHGNRIKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEAWRMKGNP
                     LPNDSSVYLVDMKKPIGTKGETKVRIVVQKGTNKIISAYPQK"
     gene            976..1239
                     /locus_tag="WHG62_001714"
     CDS             976..1239
                     /locus_tag="WHG62_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725793.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            1346..3271
                     /locus_tag="WHG62_001715"
     CDS             1346..3271
                     /locus_tag="WHG62_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ1725794.1"
                     /translation="MQLLAAEGIHQHQLNVQKSTRFIGIKVGKSNYSKNELNETKLPV
                     RVIAQTAKTRSGWDTVLEGTEFKTTLFGADIQAGVGEKARADAKIILKGIVNRIQTEE
                     KLESNSTVWQKQAGSGSTVETLKLPSFEGPALPKLTAPGGYIADIPKGNLKTEIEKLA
                     KQPEYAYLKQLQTVKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVAAVTGGVGAG
                     LIGAAQGTASAAVADAAFTALVSQASISLINNKGNIGNTLKELGRSRTVKNLVVAAAT
                     AGVADKIGASALNNISDKQWVNDLTVNLANAGSAALINTTVNGGSLKDNLEANILAAL
                     VNTAHGEAASKIKQLDHHYITHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETL
                     LDGRDPGSLNVKDRAKIIAKAKLAAGAVAALSKEDVSTAANAAAVAVENNSLNDIQDR
                     LLSGNYALCMSAGGAESFCESYRPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRN
                     GNVYFSVGKIWSTVKSTKSNISGVSVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEM
                     ISQTLVGESVGGSLCLTRACFSVSSTISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIY
                     IGNIKDIDKFISANIKK"
     gene            3280..3702
                     /locus_tag="WHG62_001716"
     CDS             3280..3702
                     /locus_tag="WHG62_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725795.1"
                     /translation="MKYMINFLKKTFELMSWVLVILIIGTFYDYYQIRQYAELEKKSI
                     SNILLYAQKEKFRLESKDKYMRGGYTKYEFIFSEYSNTTFLNFINDLKKDNYLPLDGY
                     GHGFLCRKGESISINIYPEINKFILVWGYPENLCADSN"
     gene            3739..4149
                     /locus_tag="WHG62_001717"
     CDS             3739..4149
                     /locus_tag="WHG62_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ1725796.1"
                     /translation="MRKLNNHDVHKRYQDRLEEDVEFTINYELPLSCLWSTIKDFSSD
                     FEEKTEAFFILFKELLRRGHLKLQRDGQIIGHTPEEWEQIFREVWSEYEIEPNPLPGY
                     APFDIGMWLTVEAPAYAVWIDPEDGSELKYQCLE"
     gene            4252..4872
                     /locus_tag="WHG62_001718"
     CDS             4252..4872
                     /locus_tag="WHG62_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725797.1"
                     /translation="MLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYV
                     SKTKIKIGQTELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRVLSGGKY
                     GGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSREWIKQVANNLPD
                     GSPAKAAVFKAEREGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            4875..5810
                     /locus_tag="WHG62_001719"
     CDS             4875..5810
                     /locus_tag="WHG62_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ1725798.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPEAIDYVDERKGVP
                     LAAMRHILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILQSVDDEDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
BASE COUNT         1897 a         1169 c         1461 g         1524 t
ORIGIN      
        1 ctggaagcga atatccttgc ggctttggtg aatactgcgc atggagaagc agccagtaaa
       61 atcaaacagt tggatcagca ctacatagtc cacaagattg cccatgccat agcgggctgt
      121 gcggcagcgg cggcgaataa gggcaagtgt caggacggcg cgattggtgc ggtcgtgggg
      181 gagattgtcg gggaggcttt ggttaagaat accgatttca gcggtatgac tgcttctgaa
      241 attgaaaaag ctaaagcgaa tattactgcg tatgcaaaat tggtagccgg agcgactgta
      301 ggtgttacag gaggcaatgt tgatgtggcg gcaaatgctt ccgaaacagc tgttaaaaat
      361 aatgcattag atattatttg ggatatcggc aacctcgtat gggacggcgg taaatggatt
      421 tacgccaaat ctattggcga taagcagatg gctcgagaag cggcgattga ttttggtgtg
      481 gatgccgccg cagctgccgt tccctttgtt ccggcaggtg cgactaaaat cagccgaggc
      541 ggggcttatg ttctgaaggc gggagacgaa gcagttgata cggctaaagc catacaggaa
      601 attcagaagc agaccggaat caagcttact tatgataagg ttaataaggt ttggacaaca
      661 ccggcggggt tagattatgg gttagatgct aagcatggta ataggattaa acatgtttta
      721 gcccatacaa ttccaaatcc aaacaaacct gttcattctg tttttaatgt gtcccgtaaa
      781 gaagttttgc ctttggttga tgaagcttgg agaatgaaag gaaatccttt gccaaatgat
      841 tcatccgtat atcttgtaga tatgaagaaa cctattggaa caaaaggaga aacaaaagtg
      901 cggattgttg tgcaaaaagg aacaaataaa atcatttctg catatcctca gaaataatta
      961 agaaaggaat ctcttatgga taaagaaatt aaaatttgcc caagatgtga gcaaggctac
     1021 ctttatcatg caaagcctaa atatttctct ggggaggtca ttttatgcga tgaatgttat
     1081 gctatgtggc ttggggatat gaaaattttt tacggacaat atggaaaaga tttttatgat
     1141 tatcatgagt ttatgaaaga taaaggcata gaagaaataa atatgtggga aggagagctt
     1201 tttgatcacc catattatga ggatgaaaaa tttaaataat tgattttctg ttccccgaat
     1261 ttgggaaata cgatgatatt ttaaacccaa atattattta aagtagcaat aggccgtctg
     1321 aatatccgtt tttcagacgg cctcaatgca actgctggca gccgaaggca ttcaccaaca
     1381 ccaattgaat gttcagaaaa gtacccgttt catcggcatc aaagtgggta aaagcaatta
     1441 cagcaaaaac gagctgaacg aaaccaaact gcccgtacgc gttatcgccc aaacagccaa
     1501 aacccgttcc ggctgggata ccgtactcga aggcaccgaa ttcaaaacca cccttttcgg
     1561 agccgacata caggcagggg tgggtgaaaa agcccgagcc gatgcgaaaa ttatcctaaa
     1621 aggcatcgtt aaccgcatcc aaaccgaaga aaagctggaa tccaactcga ccgtatggca
     1681 aaagcaggcc ggaagcggca gcacggttga aacgctgaag ctaccgagct ttgaagggcc
     1741 ggcactgcct aagctgaccg ctcccggcgg ctatatcgcc gacatcccca aaggcaacct
     1801 caaaaccgaa atcgaaaagc tggccaaaca gcccgaatat gcctatctga aacagcttca
     1861 gacggtcaag gacgtgaact ggaaccaagt acagctcgct tacgacaaat gggactataa
     1921 acaggaaggc ctaaccggag ccggagccgc aattatcgcc ctggcagtag cggcggtaac
     1981 cggaggagta ggcgcaggcc ttatcggagc ggcacagggt accgcatcgg cagccgtggc
     2041 cgatgctgcc tttaccgcat tggtgagcca ggcttccatt tccctgatca acaacaaagg
     2101 caatatcggt aacaccctga aagagctggg cagaagccgc acggtgaaaa atctggtggt
     2161 tgccgccgct accgcaggcg tagccgacaa aatcggcgct tcggcactga acaatatcag
     2221 cgataagcag tgggtcaatg acctaaccgt caacctggcc aatgcgggca gtgccgcgct
     2281 gattaatacc actgttaacg gcggcagcct gaaagacaat ctggaagcga atatccttgc
     2341 tgctttggtg aatactgcgc atggagaggc agcaagtaaa atcaaacagt tggatcatca
     2401 ttacattacc cacaagattg cccatgccat agcgggctgt gctgcggcgg cggcgaataa
     2461 gggcaagtgt caggatggtg cgatcggcgc tgcggtcggt gaaatccttg gcgaaaccct
     2521 actggacggc agagaccctg gcagcctgaa tgtgaaggac agggcaaaaa tcattgctaa
     2581 ggcgaagctg gcagcagggg cggttgcggc gttgagtaag gaggatgtga gtacggcggc
     2641 gaatgcggct gctgtggcgg tagagaataa ttctttaaat gatatacagg atcgtttgtt
     2701 gagtggaaat tatgctttat gtatgagtgc aggaggagca gaaagctttt gtgagtctta
     2761 tcgaccactg ggcttgccac actttgtaag tgtttcagga gaaatgaaat tacctaataa
     2821 attcgggaat cgtatggtta atggaaaatt aattattaac actagaaatg gcaatgtata
     2881 tttctctgta ggtaaaatat ggagtactgt aaaatcaaca aaatcaaata taagtggggt
     2941 atctgtcggt tgggttttaa atgtttcccc taatgattat ttaaaagaag catctatgaa
     3001 tgatttcaga aatagtaatc aaaataaagc ctatgcagaa atgatttccc agactttggt
     3061 aggtgagagt gttggtggta gtctttgtct gacaagagcc tgcttttcgg taagttcaac
     3121 aatatctaaa tctaaatctc cttttaaaga ttcaaaaatt attggggaaa tcggtttggg
     3181 aagtggtgtt gctgcaggag tagaaaaaac aatatacata ggtaacataa aagatattga
     3241 taaatttatt agtgcaaaca taaaaaaata ggagttagta tgaaatatat gattaatttt
     3301 ctaaaaaaaa catttgaatt aatgagttgg gtattagtca tactaataat tgggacattt
     3361 tatgactatt atcaaataag gcaatatgct gaattagaaa agaaatctat atcaaatatc
     3421 ttgctatatg cccaaaaaga aaaatttcgc ttagagagta aagataaata catgcgagga
     3481 ggatatacaa aatatgaatt tattttttca gaatatagta atactacttt tttaaacttc
     3541 ataaatgacc tgaaaaaaga taattattta ccacttgacg gctatggaca tggttttcta
     3601 tgtagaaaag gagagtctat atcaatcaat atataccctg aaattaataa atttatttta
     3661 gtatggggat accctgaaaa tctttgcgct gattctaatt aagtaagcaa gaataggtta
     3721 tagggaaata aaattcaaat gagaaaattg aataatcacg atgttcataa acggtatcaa
     3781 gatcgtttag aagaggatgt agagttcact atcaactatg agcttccttt gagttgtttg
     3841 tggtcaacca tcaaagactt ttccagcgat tttgaggaaa aaactgaagc gttctttatt
     3901 cttttcaaag agctgctgcg cagaggtcat ctgaaactgc aacgcgacgg gcaaattatc
     3961 gggcatacgc ccgaagaatg ggaacaaata tttagggaag tatggtctga atatgaaatc
     4021 gaacccaatc cacttcccgg ctatgccccg tttgatattg gaatgtggct tacggtcgag
     4081 gctcctgcct acgccgtatg gatagatccc gaagacggta gcgaattaaa ataccaatgt
     4141 ttggaataaa tcccgtctga aaaacagctt tttcagacgg gatttattcc aattatcggt
     4201 gatatacaga gttttgtaca agcacagacc gctgccgatc acctgtttgc tttgctgggt
     4261 gtggttccgg gtatcggtga atcgatacag gcctataaag tagcgaaagc ggcaaaaaat
     4321 ttacaaggca tgaaaaaagc cttggacaag gcagcaaccg ttgccactgc acagggctat
     4381 gtcagtaaaa ccaaaatcaa aatcggtcaa actgaattaa gggttactgc agcaactgac
     4441 aaacaattgc tgaaagctat tggcgaagga agggacacga caggtaaaat gaccgagcag
     4501 ttatttgact ctttagctaa acaaaatggc ttcagagtgc tttcgggcgg caaatacggc
     4561 ggaaataacg gttttgatca tgtatggcag gctgccgatg gtagtgttgt tttgattgta
     4621 gaaagtaagc agattaggaa cggtacggta cagctgaatc cgaatggtgc gggtggatat
     4681 acgcagatga gtcgtgaatg gattaaacaa gttgcaaata acttacctga tggtagtcct
     4741 gctaaagctg ctgtcttcaa agcggagcgg gaaggcaaat taaaaacggc aatagcaggc
     4801 gttgatcgtc aaacaggtaa ggccgttatt ctttctgtca aagttccttc taaaaccaat
     4861 ataaggagat aacaatgggg cacaatatga tgaccaccca aaaatggtat gagcatatta
     4921 ctaatgtaat cataggcaat actgctaatt tcaatagcgg ttgccctgaa gctatagatt
     4981 atgtagatga aagaaaaggc gttccgcttg cagcgatgag acatatttta atgtatactg
     5041 aagctgcggc ttcccatgcc tatctatttg aacatgatct taagaaattc aagcaatatg
     5101 cttatgttgc aggaaagttg ggtattttgc agagtgtaga tgatgaagac cccgaaccct
     5161 tcttctttcc ctgcgacatg ctcaacattc aagatccgat gtttctgatg ctgatgagcg
     5221 acagcccgca gctgcgcgag tttttggtgc gcaatatcga caacatcgcc aacgatacag
     5281 aagccttcgt aaaccgatac gacctcaacc gtcatatgat ttacaatact ctgctgatgg
     5341 tggaaggtaa gcagcttgat cggttgaaac aacgtagcga gaaagtcttg gcgcatccca
     5401 cccctagcaa atggctgcaa aagcggttgt acgattaccg cttcttcctc gctttcgccg
     5461 aacaggatgc cgaggcgatg aaggccgcct tagagccgct tttcgataaa aaaaccgcgc
     5521 gtatggctgc caaagaaaca ttgtcctatt tcgatttcta cctgcagccg caaatcgtta
     5581 cctacgccaa aatcgcatcc atgcacggtt tcgatttggg catagaccac gaaatcgcac
     5641 cgagggattt gattgtttac gatccgctgc cggcagacga atatcaagac atcttcgatt
     5701 ttatgaaaca gtatgacttg tcttacccgt atgaatatct gcaggattgg atagattact
     5761 atacgttcaa aaccgataag ctggtatttg gtaacgcgaa gcgagagtga gccgtaaaac
     5821 tctgagctcc tgttttatag attacaactt taggccgtct taaagctgaa agattttcga
     5881 aagctataaa ttgaagccct tccacagtac atagatctgt gttgtggcgg ggctttacca
     5941 cgctgattgc cggagaagaa ctcaacctgc tggcaaaaca aggcatgaga tctttgcaat
     6001 aacatgagtt gagacctttg caaaaaagcc cttccccgac agccgaaacc c
//
LOCUS       DAWGBY010000113         6051 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.113, whole genome shotgun sequence.
ACCESSION   DAWGBY010000113 DAWGBY010000000
VERSION     DAWGBY010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6051
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.113"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(86..1489)
                     /gene="mtrE"
                     /locus_tag="WHG62_001720"
     CDS             complement(86..1489)
                     /gene="mtrE"
                     /locus_tag="WHG62_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ1725799.1"
                     /translation="MNTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANAGGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREATYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYEAAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1544..4747)
                     /gene="mtrD"
                     /locus_tag="WHG62_001721"
     CDS             complement(1544..4747)
                     /gene="mtrD"
                     /locus_tag="WHG62_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ1725800.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAAEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMAASIAFSAFLALTLTPALCATMLKPIQKGHHEEKKG
                     FFGWFNKKFDNWTHGYEGWVAKVLRKTLRMMVVYVGLAVVGVFLFTRLPTSFLPTEDQ
                     GFVMVSVQLPAGATKERTDATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     MLKDWDERKTPGSDAVAVAGKLTGMMMGTLKDGFGIAIVPPPIMELGNGSGLTINLQD
                     RNNAGHTALLAKRNELIQKMRTSGIFDPSTVGAGGLEDAPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADGDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGMEQSVRFNGYPAMELSGSPATGVSTGQAMEAVQKMVDELGGGYSLEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDKQY"
     gene            complement(4759..5997)
                     /gene="mtrC"
                     /locus_tag="WHG62_001722"
     CDS             complement(4759..5997)
                     /gene="mtrC"
                     /locus_tag="WHG62_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ1725801.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFIVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1369 a         1711 c         1618 g         1353 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataaaga aagaaatgcc gtctgaaacc ttatcgtttc
       61 agacggcatt tgattgcccg ggcggttatt tgtcggtttg ggtatcccgt ttcaatccgc
      121 cgccgagcgc cttgtacaaa tcggcaaggt tttcggcgcg ggtcagttgt gccgacaaag
      181 ccgcaccctc cgccgaatag ctgctgcgtt ccgcatcgag caaatcgagc gcgccggata
      241 cgccgtgttt gtaacgcagg ccgaccaagc gcaacgcttc tttagaggcg cggctttgtt
      301 tgcttaaagc gtcataggct ttatccagct gctcgcgcgc cgccaatgcg tttgccacat
      361 cttgaaatgc ggattggacg gcggcttcat aggcaacgat ttgtgcctgt tggcgcagct
      421 tggctacatc aaggttggct ttgttcgtac cccaggtaaa aatcggcagg gtaatagacg
      481 gcgcgaacga ccaaacgccc gtgccgcttt tgaacaaccc acccaattcg gcagaacccg
      541 taccgacggt tccggtcagg cggatggatg ggaaaaaggc ggcgcgtgcc gcaccgatat
      601 tggcgttcgc ctgtttgagc gcgtgttcgg cggcgcggat gtcgggacgg tcaagcaata
      661 cttcggaact caaaccggcc ggcagttttt caacaaaaaa ctgcttgtcc agcggcaaac
      721 cggcgggcag gtcgtcgggt atcggttggt taatcagggt tgccaaggca ttgcgcgcct
      781 gttcgcggct gcgcgcggca tgggcataat cggctttggc agattcgatc agggcttcct
      841 gctggcgcag ggcgacggcg gaaatcacgc ctgccttgta ccgcaattcg gacagcttgt
      901 aggttgcttc gcgcgttttc aagacacgct gcgccaagga catcgcttct tcggcataac
      961 gctcgttaaa ataggctttg gcaacggtgg caatcaggct caaatgtgcc gcatcgcggt
     1021 tggcgacact ggcaaaatag ccttgcagtg ctgcttcgct gctgctgcgg acgcgtccga
     1081 acaggtcgag ttcgtaagat gccgcaccca gtccgacatt gtagctgctg ctgacattgc
     1141 cgccgctcaa gctgccttgg cgcgaaccgc cggcattggc ggcaagcgtg ggcagaaggt
     1201 tgttgcgctc gatcatgtat tgtttgcggt agatttcgct gttcaatacg gctgtacgca
     1261 aactggtatt gcgctcgagt gcgatgtcga tcagcttttg caggcgcggg tcggcaaaat
     1321 agtcgtgcca acccaaatcg acagcgcgga tgccgctgtc ggcggtatcg tttttgaacg
     1381 tttcggcaac ttcaactttg ggctgctcgt attggggaat catggtacag gcagacaatg
     1441 caaaggctgc cgcaacagaa gtcaaggtgg ttttcaatgt agtattcata aaaaagtcct
     1501 gatgccgtct gaaaacccgt gggcgttcag acggcatggt tgcttaatat tgtttatcgt
     1561 ccgaaccggt gatgcccgcc tcggcggcgt gttttaccgc catttcgtgt tcgtgtgcag
     1621 tttctttgaa gaatttgcgc accaccacat agaaaagcgg aacaaggaac acggacaaga
     1681 gcgtgccgat gagcatcccc cagaatacgg tcgtaccgat ggcgcgctgg ctggcagaac
     1741 ttgcaccgcc ggcaatatac aggggaacca cgcccaaaat aaaggcaaac gaggtcataa
     1801 taatcggacg gaaacgcagg cgggcggctt ccaaagcggc ttcgaccgcg cttttgcctt
     1861 gtgcttgaag gtctttggca aactcgataa tcagaatcgc gtttttcgca ctcaaaccca
     1921 tcacggtaac gaaaccgact tggaagtaga tgtcgttggc aaacgaggga acgctgccca
     1981 acagtccttc aaacaaattg cgcccggtta cgcccgcagc cgcaccgatc aaacccaacg
     2041 gaatcacaag gatgaccgcc agcggaatcg accagctttc ataaagcgcg gcaagtacca
     2101 aaaatacggc tgcaaccgcc aaaccgtaca aaatcagggt ttgcgaaccg ccttttgcct
     2161 cttcgcgcga ctgtccgccc cactccaggc tgtaaccgcc gcccaattcg tcaaccattt
     2221 tttgaactgc ctccatggcc tgaccggtgg aaacaccggt tgcgggcgaa ccagacagtt
     2281 ccatagcggg ataaccgttg aaacggacgc tctgttccat accgttttcc caagaaacag
     2341 tggcaatggt ggaaagcggt acggcaacgc cggatttgtt cggcacggtc aggttcaaaa
     2401 tatcggcagg ctgcatacgg gcatccccgt ctgcctgcac catcacgcgc tgcagacggc
     2461 cttggttcgg gaagtcgctg acataagacg aactcagcgc gcttgccaat gcggtgcgga
     2521 tgtcggcaaa cgaaatgcct tgcgccgccg ctgcggcacg gttgatgtcg attttcaact
     2581 gcggcgcgtc ttccaaaccg ccggcaccga cggtactcgg gtcgaagata ccgctggtac
     2641 gcattttttg aatcagctcg ttgcgcttcg ccagcaatgc ggtatgaccg gcattgttgc
     2701 ggtcttgcag attgatggtc agacccgaac cgttgcccaa ctccataatc ggaggcggaa
     2761 cgatggcgat gccgaaaccg tctttaagcg tccccatcat catacccgtc aatttgccgg
     2821 caaccgcaac ggcatcgctg ccgggggttt tacgttcgtc ccaatcctta agcatcgcaa
     2881 aacccatcgc catattctgg ccgctgcccg aaaagctgaa gccggaaacg gtaatgatgt
     2941 tttcaatttc aggaatgctt tttgccaatt gggtaacttg cgccagcgtc gcatcagtac
     3001 gctctttggt cgcacccgca ggcagttgca cgctgaccat gacgaagcct tggtcttcgg
     3061 ttggcaagaa agaagtcggc aggcgcgtaa acaggaatac gcccacaacc gccaaaccaa
     3121 cgtaaacaac catcatgcgc aaagtcttgc gcaatacttt ggcaacccag ccttcgtagc
     3181 cgtgtgtcca gttgtcgaat tttttgttga accaaccgaa gaagcctttt ttctcttcgt
     3241 gatgcccctt ttgaatcggt ttgagcatcg tggcacacaa tgcaggcgtg agtgtcagcg
     3301 caaggaaggc ggagaatgca attgatgccg ccatcgtcag ggcaaactgt ttgtaaatat
     3361 tgcccgtcgc gccgctgaac atcgccaacg gtacgaacac ggaaatcaat acggcggtaa
     3421 taccgatcac cgcgccggaa atctgaccca ttgctttttt ggtggcttct ttaggcggca
     3481 aaccttccgc cgccataatg cgctcgacgt tttcaaccac cacaatcgca tcgtcgacca
     3541 cgataccgat gaccaaaacc atcgcaaaca tcgtcaatac gttaatcgac atacccatat
     3601 aagagatgaa ggcgaaaccg cccaacaggg aaatcggtac gacgatggtc ggaatcagcg
     3661 tataacggat gttttgcagg aagagataca ttacgacaaa caccagcacc atcgcttcga
     3721 ttaaagtgtg aatcactttt tcaatcgaaa tttcgacgaa tttggaagtg tcgtaagggg
     3781 ttttccagct cataccctga ggaaagtatt tttccaacgt cgccatgcgt tctttaaccg
     3841 cctttgccgt cgccatcgca ttgccgctgt tggacagcat caccgccata ccggtggtat
     3901 ttacaccgtt cagacgggtt gaggaagaat agtcttccat acccagtccg acccttgcca
     3961 catccttcag gtaaacatta gaaccgtcgg tattggcgcg gaggatgacg ttgccgaatt
     4021 cttctgccgt acccaactgc ccttgcgccg ttacggtagc cgtaaccgtc tgtccgcgaa
     4081 cggcgggaag cgaaccgata gaacccgctg aaatctggac gttctgggcg gacagcgcac
     4141 tgccgatatc ggcaaacgac aaattgtagt tttgcagttt cttaggatca acccaaatcc
     4201 gcatcgcgcg ttgcgcgccg aacaggcgta cctgccccac gccttcgata cgctgcaact
     4261 cgggaacgat attacgctgc gcgtagtcgt tcatctcttc ggttgactgc acatccgacg
     4321 aaagcatcac aatcatcagg aaattggaac gcgccttgga tacggttacg ccgtattgct
     4381 ggacggttgc cggcagcgtg ctcaatactt cggaaagctt gttctgcact tccacctgcg
     4441 ccagattctc gtcggtatcg ggcgtaaagg tcaggctcac gctgccgctg ccgctcgaat
     4501 cggcggaagt ggacatataa tccaaacctt ccacgccgtt catattccgc tcgatcacgg
     4561 aaagcacgct gtcttccatt acctgcgcgg acgcacccgg ataagtggcg tgcaaagtaa
     4621 tggtcggggc ggcgacagac ggatattgcg aaacaggcag gcttttgatg ccgaaaatac
     4681 ccgccgcaat aatgaaaatc gaaataaccc acgcaaaaat agggcggtcg ataaaaaatt
     4741 tagccatcga tgccttcctt attccgcttc agaagcagtt ttggcttcag atgccgtctg
     4801 aacgccggat tgaggcgcgg cggcttggtt ttcagacggc gcccattctt tgggcgttac
     4861 ctttttcgca cccgttatac cggcgatact gatgccttcc acaaccacct tgtccccgtc
     4921 cttcagaccc gacgtaacaa tccaattcgt accctgctgt tgcgcaaccg ttacctcgcg
     4981 gggttccata ccgccttggg cattcacaat catcacggta tctttcgcac cgcgcgttac
     5041 cgcctgctgc ggcacgatga atgcgttatc caccgccact tggtccatca gcacgcgcac
     5101 atacaggccg ggcatcagga tattctgatc gttcggtacg gcggcgcgca gggtaatctg
     5161 accggtcgat tcgttgacgg tcggatcggc aaacagcagg cggccttttt cagggtaaac
     5221 tgtgccgtcg tcaaatttga tgccgaccgc aatcacacca tccgccgcca gcagtttgcc
     5281 ttcggctatc tgacggcgca atttcatcac ttcggatgca gactgggtaa cgttcacata
     5341 catcggattg gtttggcgga tggttgccag cacggtcgta tcgcccgcat tcaacagcgt
     5401 accttcggaa actttggact gaccgataaa gccggaaatc ggcgcggtaa tgcgcgaacg
     5461 gttcagatta atgccggcag atttgattgc cgcctgtgct gctttgacac ctgcctcggc
     5521 agaacgtttc gccgttaccg cagcatcgta ttcctgccgg ctgacggctt cggcggcaac
     5581 caaaggcttg tatcgcgcca aatccgcatc cgctttggca agcgttgcct gagccgttgc
     5641 cagttgcgcg cgcgcacttt ccagacctgc ttcataagtg gaactgtcga tctgatacag
     5701 cggctgtccg gcacggacat aactgccttc ttggaacagg cgtttttgga tgatgccgcc
     5761 gacttgggcg cggacatcgg cggtacgcag cgattccaaa cgccccggca actcgacggt
     5821 caatgcgacg gtttgcggat ggacggttac gacaccgacg acgggcgcag gggcttcccg
     5881 accagcaggc tgcccgccct gcgccgcgtc tccgccttta ccgcaagacg acagtaccaa
     5941 tgcaacggcg gcagccaacg cggccgcacg catcgcctta aaagcataaa aagccattat
     6001 ttatcctatc tgtctggttt gatgtaaagg gttttgccaa tcaacaggca t
//
LOCUS       DAWGBY010000114         6027 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.114, whole genome shotgun sequence.
ACCESSION   DAWGBY010000114 DAWGBY010000000
VERSION     DAWGBY010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.114"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            45..458
                     /locus_tag="WHG62_001723"
     CDS             45..458
                     /locus_tag="WHG62_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ1725802.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVHRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLAFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            504..1133
                     /gene="nth"
                     /locus_tag="WHG62_001724"
     CDS             504..1133
                     /gene="nth"
                     /locus_tag="WHG62_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ1725803.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1271..2770
                     /locus_tag="WHG62_001725"
     CDS             1271..2770
                     /locus_tag="WHG62_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ1725804.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIKHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSSNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLRAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            2973..4493
                     /locus_tag="WHG62_001726"
     CDS             2973..4493
                     /locus_tag="WHG62_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ1725805.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWADGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TASPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTFGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLIAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRADV"
     gene            4550..5635
                     /gene="nagZ"
                     /locus_tag="WHG62_001727"
     CDS             4550..5635
                     /gene="nagZ"
                     /locus_tag="WHG62_001727"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ1725806.1"
                     /translation="MTVPHIPRGPVMAGIAAFRLTEEEKQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLSELEAADLAPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELRDDFRIPDNPALAQRWQYMANTLGSAAAQAVIQTAD
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5716..5792
                     /locus_tag="WHG62_001728"
     tRNA            5716..5792
                     /locus_tag="WHG62_001728"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5750..5752,aa:Pro,seq:cgg)
BASE COUNT         1376 a         1845 c         1525 g         1281 t
ORIGIN      
        1 cgtacaatcc gtcgccgatt tttgcctgtt tgagactgtt tgcaatgatg cccgcctacg
       61 cctacgccgc gctcgccttt tccgccttca cttccgccac cctcctgccc ggcacatccg
      121 aagccgcctt tgccctgttc gtccaccgct ttcccgaaca cgcatacggc gcgttgctgt
      181 gcgccggcct tgccaacgga ttgggcagta tggtttccta ttggatgggg cgtttgctgc
      241 cctcccgaaa aatgccgtct gaaaaaacac tgaatctgat gcggcgtttc ggtatttggc
      301 tgcttgcgtt tgcctggctg cccgtcgtcg gcgacgcact gccgcttgcc gccggctggc
      361 tgcggttgaa tccgtggaca agcgggctga tgctggttat cggcaaaacg gcgcgttacg
      421 ccttcattct gtggggaatg caatattacg ccgcctgaac cgtgcgttat aatgccgacc
      481 gcacaaaccg actgcacaaa aaaatgaaca gacacatccg ccaagaaatt ttcgaacgct
      541 tccgcgccgc caacccccat ccgaccaccg agctgaattt caactcccct ttcgagcttt
      601 taatcgccgt tctgctttca gcgcaggcga ccgatgtcgg cgtaaacaag gcgacggcga
      661 agctgtttcc ggttgccgat acgccgcagg caatgctgga tttgggcttg gacggcgtga
      721 tggaatacac gaaaaccatc gggttgtata aaaccaagtc caagcacatc atgcagacct
      781 gccgcatcct gctggaaaaa tacaagggcg aagtgccgga agaccgcgag gctttggaat
      841 cgttgccggg cgtggggcgc aaaacggcaa acgtggtatt gaacacagcg ttcggacacc
      901 ccgttatggc ggtcgatacg catattttcc gcgtgtccaa ccgaaccaaa atcgcacccg
      961 ggaaagatgt gcgcgaagtc gaagacaaac tgatgcgctt cattcctaaa gaatttctga
     1021 tggacgcgca ccactggctg attttgcacg gacgctacac ctgcaaggca ctcaaaccgc
     1081 aatgccaaac ctgcatcatc aacgatttgt gcgaatatcc cgccaaagcc tgactgccgc
     1141 cgcccttcaa aatgaaacgc ttgaaaattc ggacggacgt tgtagaattt caacctatgc
     1201 cgtctgaagc cgacaaaatg cgcttcagac ggcattaaag ccggtaccgg catccgacaa
     1261 aggacaaaac gtgttcaaaa aataccaata cctcgctttg gcagcactgt gtgccgcctc
     1321 gctggcaggc tgcgacaaag ccggcagctt tttcggtgcg gacaaaaaag aagcatcctt
     1381 cgtagaacgc atcaaacaca ccaaagacga cggcagcgtc agtatgctgc tgcccgactt
     1441 tgtccaactg gttcaaagcg aaggcccggc agtcgtcaat attcaggcag cccccgcccc
     1501 gcgcacccaa aacggcagca gcaatgccga aaccgattcc gacccgcttg ccgacagcga
     1561 cccgttctac gaatttttca aacgcctcgt cccgaacatg cccgaaatcc cccaagaaga
     1621 agcagatgac ggcggattga acttcggttc gggcttcatc atcagcaaag acggctatat
     1681 tctgaccaat acgcacgtcg ttaccggcat gggcagtatc aaagtcctgc tcaacgacaa
     1741 gcgcgaatat accgccaaac tcatcggttc ggatgtccaa tccgatgtcg cccttctgaa
     1801 aatcgacgca acggaagagc tgcccgtcgt caaaatcggc aatcccaaag atttgaaacc
     1861 gggcgaatgg gtcgccgcca tcggcgcgcc cttcggcttc gacaacagcg tgaccgccgg
     1921 catcgtgtcc gccaaaggca gaagcctgcc caacgaaagc tacacaccct tcatccaaac
     1981 cgacgttgcc atcaatccgg gcaactccgg cggcccgctg ttcaacttaa aaggacaggt
     2041 cgtcggcatc aactcgcaaa tatacagccg cagcggcgga ttcatgggca tttccttcgc
     2101 catcccgatt gacgttgcca tgaatgtcgc cgaacagctg aaaaacaccg gcaaagtcca
     2161 acgcggacaa ctgggcgtga ttattcaaga agtatcctac ggtttggcac aatcgttcgg
     2221 tttggacaaa gccggcggcg cactgattgc caaaatcctg cccggcagcc ccgcagaacg
     2281 tgccggcctg cgggcgggcg acatcgtcct cagcctcgac ggcggagaaa tacgttcttc
     2341 cggcgacctt cccgttatgg tcggcgccat tacgccggga aaagaagtca gcctcggcgt
     2401 atggcgcaaa ggcgaagaaa tcacaatcaa agtcaagctg ggcaacgccg ccgagcatat
     2461 cggcgcatca tccaaaacag atgaagcccc ctacaccgaa cagcaatccg gtacgttctc
     2521 ggtcgaatcc gcaggcatta cccttcagac acataccgac agcagcggcg gacacctcgt
     2581 cgtcgtacgg gtttccgacg cggcagaacg cgcaggcttg aggcgcggcg acgaaatcct
     2641 cgccgtcggg caagtccccg tcaatgacga agccggtttc cgcaaagcta tggacaaggc
     2701 aggcaaaaac gtccccctgc tggtcatgcg ccgtggcaac acgctgttca tcgcattaaa
     2761 cctgcaataa cgcacataat ttaaccaaaa tatttttaaa tgataaaatg cccgtcaata
     2821 ccgattaacg ggcattttac aaaaatcagt tggttgattt taaacaaata ttttttacga
     2881 caaaaaatat ttccacccat tttgccaaca aaacccaaac cggaggcgga cagataccca
     2941 cccatccgga cgcttaacac cccccataaa ccatgcagct gattgactat tcacattcat
     3001 ttttctcggt tgtgccaccc tttttggcac tggcacttgc cgtcattacc cgccgcgtac
     3061 tgctgtcttt aggcatcggt attttggtcg gcgttgcctt tttggtcggc ggcaaccccg
     3121 tcgacggtct gacacacctg aaagacatgg tcgtcggctt ggcttgggca gacggcgatt
     3181 ggtcgctggg caaaccaaaa atcttggttt tcctgatact tttgggcatt ttcacttcac
     3241 tgctgaccta ctccggcagc aatcaggcgt ttgccgactg ggcaaaacgg cacattaaaa
     3301 accggcgcgg cgcgaaaatg ctgaccgcct gcctcgtgtt cgtaaccttt atcgacgact
     3361 atttccacag cctcgccgtc ggtgcgattg cccgccccgt taccgacaag tttaaagttt
     3421 cccgcgccaa actcgcctac atcctcgact ccactgcctc gcccatgtgc gtgctgatgc
     3481 ccgtttcaag ctggggcgcg tcgattatcg ccacgcttgc cggattgctc gttacctaca
     3541 aaattaccga atacacgccg atggggacgt ttgtcgccat gagcctgatg aactattacg
     3601 cgctgtttgc cctgattatg gtattcgtcg tcgcatggtt ctccttcgac atcggctcga
     3661 tggcgcgttt cgaacaggct gcgttgaacg aagcccacga cgaaaccgcc gcttcagacg
     3721 ctaccaaagg tcgtgtttac gcattgatta ttcccgtttt ggccttaatc gcctcaacgg
     3781 tttccgccat gatctacacc ggcgcgcagg caagcgaaac cttcagcatt ttgggggcat
     3841 ttgaaaatac cgacgtaaac acttcgctgg tattcggcgg cacttgcggc gtgcttgccg
     3901 tcgtcctctg cacgttcggc acgattaaaa ccgccgatta tcccaaagcc gtgtggcagg
     3961 gtgcgaaatc catgttcggc gcaatcgcca ttttaatcct tgcctggctc atcagtacgg
     4021 ttgtcggcga aatgcacacg ggcgactacc tctccacgct gattgcgggc aacatccatc
     4081 ccggcttcct gcccgtcatc ctcttcctgc tcgccagcgt gatggcgttt gccacaggca
     4141 caagctgggg gacgttcggc attatgctgc cgattgccgc cgccatggcg gtcaaagtcg
     4201 aacccgcgct gattatcccg tgtatgtccg cagtaatggc gggggcggta tgcggcgacc
     4261 actgttcgcc catctccgac acgaccatcc tgtcgtccac cggcgcgcgc tgcaaccaca
     4321 tcgaccacgt tacctcgcaa ctgccttatg ccctgacggt tgccgccgcc gccgcatcgg
     4381 gctacctcgc attgggtctg acaaaatccg cgctgttggg ctttggcacg accggtattg
     4441 tattggcggt gctgattttt ctgttgaaag ataaaaaacg cgccgacgtt tgaccttccc
     4501 ccctgttcag acggcatatg ccgtctgaag ttttttggag caaaccgcaa tgaccgtccc
     4561 ccatattccg cgcggccccg tcatggcagg cattgccgcc ttccgcctga ccgaagagga
     4621 aaagcaacgc ctgctcgatc ccgcaatcgg cggcatcatc ctcttccgcc gcaacttcca
     4681 aaacattgaa cagctcaaaa cactcaccgc cgaaatcaaa gccctgcgca cacccgaact
     4741 cattatcgcc gtcgatcacg aaggcggcag ggtgcaacgg tttatcgaag gcttcacccg
     4801 cctgcctgca atgaacgttt tagggcaaat ttgggacaaa gacggcgcgt ccgccgccga
     4861 aaccgctgcc ggacaagtcg gccgggtttt ggcaaccgag ctttccgcct gcggcatcga
     4921 tttgtccttc acgcccgtct tagatttgga ctggggaaac tgcgccgtca tcggcaaccg
     4981 cagcttccac cgcaatcccg aagcggtcgc ccgcctcgcc ctcgcccttc aaaaaggttt
     5041 ggcaaaaggc ggtatgaaat catgcggcaa acatttcccc ggacacggat ttgtcgaagg
     5101 ggacagccat ttggtgctac ccgaagacgg gcgcagcctg tccgaactcg aagccgccga
     5161 cctcgccccc ttccgcatta tgagccgcga aggtatggca gcggttatgc ccgcccacgt
     5221 cgtttatccg caagtggaca caaagcccgc cgggttttcc gaaatctggc tcaaacaaat
     5281 tttgcgccgc gacatcgggt tcaaaggcgt gattttctcg gacgatttaa ctatggaggg
     5341 cgcgtgcggg gcaggcggca tcaaagaacg cgcccgcatt tcctttgagg caggttgcga
     5401 catcgtcctc gtctgcaacc gtcccgacct tgtggacgaa ctgcgcgatg atttccgcat
     5461 tcctgacaat cccgctttgg cgcaacgttg gcaatatatg gccaacacgc tcggcagtgc
     5521 cgccgcgcaa gccgttatac agacggcgga tttccaagcg gcgcaagcct ttgttgccgg
     5581 ccttgcctcg ccgcaagaca cggcgggcgg cgtaaaagtc ggcgaagcct tttaaatccg
     5641 cccgacacgc ggcaaaaagg caaaacggta taggcacgcc gtattttttg cgctataatc
     5701 acgccttact taattcggaa tgtagcgcag cccggtagcg cacttcgttc gggacgaagg
     5761 ggtcggaggt tcgaatcctc tcattccgac caaatccaaa ccgcctcggt atccattgcc
     5821 gaggcagttt ttccttttga cgtcaacaga aaaatgccgt ctgaaacaga atgctgtttc
     5881 agacggcatt tcgttttccc taaccctgcc atttgcgcgc actgacaaag ggtatcggca
     5941 aggttcaaaa gaccatcgga atttaggaag ccgagcttgt acccaacggc agcatcttat
     6001 tcagtaaggc tccgtcctga ttgggcg
//
LOCUS       DAWGBY010000115         6024 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.115, whole genome shotgun sequence.
ACCESSION   DAWGBY010000115 DAWGBY010000000
VERSION     DAWGBY010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6024
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.115"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..436)
                     /locus_tag="WHG62_001729"
     CDS             complement(<1..436)
                     /locus_tag="WHG62_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEZ1725807.1"
                     /translation="MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASLQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKAPA"
     gene            complement(472..585)
                     /gene="rrf"
                     /locus_tag="WHG62_001730"
     rRNA            complement(472..585)
                     /gene="rrf"
                     /locus_tag="WHG62_001730"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(682..3573)
                     /locus_tag="WHG62_001731"
     rRNA            complement(682..3573)
                     /locus_tag="WHG62_001731"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3980..4055)
                     /locus_tag="WHG62_001732"
     tRNA            complement(3980..4055)
                     /locus_tag="WHG62_001732"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4020..4022),aa:Ala,seq:tgc)
     gene            complement(4061..4137)
                     /locus_tag="WHG62_001733"
     tRNA            complement(4061..4137)
                     /locus_tag="WHG62_001733"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4101..4103),aa:Ile,seq:gat)
     gene            complement(4239..5779)
                     /locus_tag="WHG62_001734"
     rRNA            complement(4239..5779)
                     /locus_tag="WHG62_001734"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1305 a         1762 c         1304 g         1653 t
ORIGIN      
        1 tggctggggc ttttggtgcg ggcgcgccga cggaagcctg atccttcagc ttcgccagca
       61 ccgcagggcc gatgcccttt accttggtca aatcgtctac agacttgaac gcaccgtttt
      121 gcgcacggta ttccgcaatg gccttcgcct tcgccgggcc tatgcccggc agcgcctcca
      181 actcctgcag cgaagccgca ttgatgttta ccgccgcaag ggagaaggcg caggagaaca
      241 gcatacagaa cagcacgaac attttcttca tggtttttcc tttaagggtt gcaaacaata
      301 aaccgcatct tgcgacgata aaacgggtca ttctaaaatg aatatcccaa agtttcaagc
      361 cgttcctccg caaacccgac cggacgccgt acggatactg tcccgccatc cccgacattt
      421 tttccgggca aagcaaaaac ccccgaataa tcgggggttt tctgaaaggg tgtttggcag
      481 tgacctactt tcgcatggaa gaaccacact atcatcggcg ctgagtcgtt tcacggtcct
      541 gttcgggatg ggaaggcgtg ggaccaactc gctatggccg ccaaacttaa actgttacaa
      601 atcggtaaag ccttaatcaa tatattcggt aatgactgaa tcagtcagta agcttttatc
      661 tcttgaagtt cttcaaatga tagagtcaag cctcacgagc aattagtatg ggttagcttc
      721 acgcgttacc gcgcttccac accccaccta tcaacgtcct ggtctcgaac gactctttag
      781 tgcggttaaa ccgcaaggga agtctcatct tcaggcgagt ttcgcgctta gatgctttca
      841 gcgcttatct cttccgaact tagctacccg gctatgcaac tggcgttaca accggtacac
      901 cagaggttcg tccactccgg tcctctcgta ctaggagcag cccccgtcaa acttccaacg
      961 cccactgcag atagggacca aactgtctca cgacgtttta aacccagctc acgtaccact
     1021 ttaaatggcg aacagccata cccttgggac cgactacagc cccaggatgt gatgagccga
     1081 catcgaggtg ccaaactccg ccgtcgatat gaactcttgg gcggaatcag cctgttatcc
     1141 ccggagtacc ttttatccgt tgagcgatgg cccttccata cagaaccacc ggatcactat
     1201 gtcctgcttt cgcacctgct cgacttgtcg gtctcgcagt taagctacct tttgccattg
     1261 cactatcagt ccgatttccg accggaccta ggtaaccttc gaactcctcc gttacgcttt
     1321 gggaggagac cgccccagtc aaactgccta ccatgcacgg tccccgaccc ggatgacggg
     1381 tctgggttag aacctcaaag acaccagggt ggtatttcaa ggacggctcc gcagagactg
     1441 gcgtctctgc ttctaagcct cccacctatc ctacacaagt gacttcaaag tccaatgcaa
     1501 agctacagta aaggttcacg gggtctttcc gtctagcagc gggtagattg catcttcaca
     1561 accacttcaa cttcgctgag tctcaggagg agacagtgtg gccatcgtta cgccattcgt
     1621 gcgggtcgga acttacccga caaggaattt cgctacctta ggaccgttat agttacggcc
     1681 gccgtttact ggggcttcga tccgatgctt gcacatcttc aattaacctt ccagcaccgg
     1741 gcaggcgtca caccctatac gtccactttc gtgttagcag agtgctgtgt ttttaataaa
     1801 cagtcgcagc cacctattct ctgcgaccct ccagggctta cggagcaagt ccttaacctt
     1861 agagggcata ccttctcccg aagttacggt atcaatttgc cgagttcctt ctcctgagtt
     1921 ctctcaagcg ccttagaatt ctcatcctgc ccacctgtgt cggtttgcgg tacggttcga
     1981 ttcaaactga agcttagtgg cttttcctgg aagcgtggta tcggttgctt cgtgtccgta
     2041 gacactcgtc atcacttctc ggtgttaaga agacccggat ttgcctaagt cttccaccta
     2101 ccggcttaaa caagctattc caacagcttg ccaacctaac cttctccgtc cccacatcgc
     2161 atttgaatca agtacaggaa tattaacctg tttcccatcg actacgcatt tctgcctcgc
     2221 cttaggggcc gactcaccct acgccgatga acgttgcgta ggaaaccttg ggctttcggc
     2281 gagcgggctt ttcacccgct ttatcgctac tcatgtcaac attcgcactt ctgatacctc
     2341 cagcacactt tacaatgcac cttcatcggc ctacagaacg ctcccctacc atgccggtaa
     2401 accggcatcc gcagcttcgg ttatagattt gagccccgtt acatcttccg cgcaggacga
     2461 ctcgaccagt gagctattac gctttcttta aatgatggct gcttctaagc caacatcctg
     2521 gctgtctggg ccttcccact tcgtttacca cttaatctat cattggggac cttagctggc
     2581 ggtctgggtt gtttccctct tgacaacgga cgttagcacc cgctgtctgt ctcccgagga
     2641 accacttgat ggtattctga gtttgccatg ggttggtaag ttgcaataac cccctagcca
     2701 taacagtgct ttacccccat cagtgtcttg ctcgaggcac tacctaaata gttttcgggg
     2761 agaaccagct atctccgagt ttgtttagcc tttcacccct atccacagct catccccgca
     2821 ttttgcaaca tgcgtgggtt cggtcctcca gtacctgtta cggcaccttc aacctggcca
     2881 tggatagatc actcggtttc gggtctacac ccagcaactc atcgccctat taagactcgg
     2941 tttccctacg cctcccctat tcggttaagc tcgctactga atgtaagtcg ttgacccatt
     3001 atacaaaagg tacgcagtca caccactagg gtgctcccac tgtttgtatg catcaggttt
     3061 caggttctgt ttcactcccc tcccggggtt cttttcgcct ttccctcacg gtactggttc
     3121 actatcggtc gatgatgagt atttagcctt ggaggatggt ccccccatat tcagacagga
     3181 tttcacgtgt cccgccctac ttttcgtacg cttagtaccg ctgttgagat ttcgaatacg
     3241 ggactatcac ccactatggt caagcttccc agcttgttct tctatctcga cagttatcac
     3301 gtacaggctc ctccgcgttc gctcgccact acttgcggaa tctcggttga tttcttttcc
     3361 tccggatact tagatggttc agttctccgg gttcgcttct ctaagtctat gtattcaact
     3421 taggatactg cacagaatgc agtgggtttc cccattcgga catcgcggga tcatagcttt
     3481 attgccggct cccccgcgct tttcgcaggc ttacacgtcc ttcgtcgcct atcatcgcca
     3541 aggcatccac ctgatgcact tattcacttg actctatcat ttcaagaact tccttgactt
     3601 cgtttaccta cccgttgact aagtaagcaa acttgaaatt cctactttga taaagcttac
     3661 tgctttgttg tgtcttaatc ctgccttttg tgtttcagga ttaagtcgat acaatcatca
     3721 cccaaatact gtgtttgttt tcttttctct tgtgagcgat tttttatcct ttgcaaagaa
     3781 taaaaaatca aaacaaacgc tttgtctttg tttgttgatt tcggctttcc aatttgttaa
     3841 agatcgatgc gttcgatatt gctatctact gtgcaaatca aaacgagctg attattatat
     3901 cagcattttg ttcttggtca agtgtgacgt cgccctgaat ggattctgtt ccattcttcc
     3961 gttttgattt gtacagtatt ggtggaggca aacgggatcg aaccgatgac cccctgcttg
     4021 caaagcaggt gctctaccaa ctgagctatg cccccgttct tggtgggtct gggaggactt
     4081 gaacctccga ccccacgctt atcaagcgtg tgctctaacc agctgagcta caaacccgga
     4141 ttctcttctt aagcgaatct tgccttcact caagcttctt ccgcatcttt ttcagtttac
     4201 cgataagtgt gaatgcctaa agcctcttct ttctctagaa aggaggtgat ccagccgcag
     4261 gttcccctac ggctaccttg ttacgacttc accccagtca tgaagcatac cgtggtaagc
     4321 ggactccttg cggttaccct acctacttct ggtatccccc actcccatgg tgtgacgggc
     4381 ggtgtgtaca agacccggga acgtattcac cgcagtatgc tgacctgcga ttactagcga
     4441 ttccgacttc atgcactcga gttgcagagt gcaatccgga ctacgatcgg ttttgtgaga
     4501 ttggctccgc ctcgcggctt ggctaccctc tgtaccgacc attgtatgac gtgtgaagcc
     4561 ctggtcataa gggccatgag gacttgacgt catccccacc ttcctccggc ttgtcaccgg
     4621 cagtctcatt agagtgccca actgaatgat ggcaactaat gacaagggtt gcgctcgttg
     4681 cgggacttaa cccaacatct cacgacacga gctgacgaca gccatgcagc acctgtgtta
     4741 cggctcccga aggcactcct ccgtctctgg aggattccgt acatgtcaag accaggtaag
     4801 gttcttcgcg ttgcatcgaa ttaatccaca tcatccaccg cttgtgcggg tccccgtcaa
     4861 ttcctttgag ttttaatctt gcgaccgtac tccccaggcg gtcaatttca cgcgttagct
     4921 acgctactaa gcaatcaagt tgcccaacag ctaattgaca tcgtttaggg cgtggactac
     4981 cagggtatct aatcctgttt gctacccacg ctttcggaca tgaacgtcag tgttgtccca
     5041 ggaggctgcc ttcgccatcg gtattcctcc acatctctac gcatttcact gctacacgtg
     5101 gaattctacc tccctctgac acactcgagt cacccagttc agaacgcagt tcccgggttg
     5161 agcccgggga tttcacatcc tgcttaagta accgtctgcg cccgctttac gcccagtaat
     5221 tccgattaac gctcgcaccc tacgtattac cgcggctgct ggcacgtagt tagccggtgc
     5281 ttattcttca ggtaccgtca tcagccgctg gtattagcaa cagccttttc ttccctgaca
     5341 aaagtccttt acaacccgaa ggccttcttc agacacgcgg catggctgga tcaggcttgc
     5401 gcccattgtc caaaattccc cactgctgcc tcccgtagga gtctgggccg tgtctcagtc
     5461 ccagtgtggc ggatcatcct ctcagacccg ctactgatcg tcgccttggt aggcctttac
     5521 cccaccaacc agctaatcag atatcggccg ctcgaatagc gcaaggccca aaggtcccct
     5581 gctttctctc tcaagacgta tgcggtatta gctgatcttt cgatcagtta tcccccacta
     5641 ctcggtacgt tccgatatgt tactcacccg ttcgccactc gccacccaag aagcaagctt
     5701 ctctgtgctg ccgtccgact tgcatgtgta aagcatgccg ccagcgttca atctgagcca
     5761 ggatcaaact cttatgttca atctctaact ttttaacttc tggtctgctt caaagaaacc
     5821 gacaggacaa tgttcaaaac attatcttgt ctgtctttca aacagtgtga ggctcaaggc
     5881 actcacactt atcggtaatc tgttttgtta aagagcgttg cgaattataa agtatctctt
     5941 ccgcctgtca agatatctct cgatatcccc aacattctgt gctatacttt tcagttcgtc
     6001 cgccgcttct gcagcagcga agaa
//
LOCUS       DAWGBY010000116         6018 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.116, whole genome shotgun sequence.
ACCESSION   DAWGBY010000116 DAWGBY010000000
VERSION     DAWGBY010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6018
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.116"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(205..2808)
                     /gene="pepN"
                     /locus_tag="WHG62_001735"
     CDS             complement(205..2808)
                     /gene="pepN"
                     /locus_tag="WHG62_001735"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ1725808.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLSVKINGAVADYMLEGETLTIAGVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEYSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRATMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAAAFDYQGKRATEAVLLLT
                     EAEQIFLLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIGLPKHEKLLAAVEKVISDGLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGLSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2932..3726)
                     /locus_tag="WHG62_001736"
     CDS             complement(2932..3726)
                     /locus_tag="WHG62_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ1725809.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAGKLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            complement(4477..5346)
                     /locus_tag="WHG62_001737"
     CDS             complement(4477..5346)
                     /locus_tag="WHG62_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEZ1725810.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWDGKKRETVLKQHFKHMAKLMLEYGLYWYAPAKRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLI
                     GRTEGLRALVKQFRKGSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREEDNTVTLHFYPAWESFPSEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5397..5933)
                     /gene="ruvC"
                     /locus_tag="WHG62_001738"
     CDS             complement(5397..5933)
                     /gene="ruvC"
                     /locus_tag="WHG62_001738"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ1725811.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPPDAP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(5936..>6018)
                     /locus_tag="WHG62_001739"
     CDS             complement(5936..>6018)
                     /locus_tag="WHG62_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ1725812.1"
                     /translation="NQSKASVMLGLNRNTLRKKLIQHGLL"
BASE COUNT         1376 a         1576 c         1542 g         1524 t
ORIGIN      
        1 acaaaaacca gtacagcgtt gcctcgcctt accgtactat ctgtactgtc tgcggctttg
       61 tcgccttgtc ctgatttttg ttaatccact ataattaata tgactttgcg gccgttttgc
      121 cattgcgtaa taaaacgatg gggaagtgat gataaaacgt gtgtgtaact atatcagacg
      181 gcattgtttt tctgtttgac ggcctcaatc caaaatcttg ccgacgattt cgcccacgtc
      241 tttcgacaat ccttcctgcg cccgaatgcg ctgcaatgct tgtttcacca agtttttgcg
      301 gtgcggttcg agcttattgc agagattgaa cgcctgcact aggcgggcgg cgacctgcgg
      361 gttaaagcgg tcgatttcga tgactttgtc ggcgatgaag cggtagccgc tgccgtcttc
      421 tgcgtggaaa tgcgggacgt tgcggctgaa gctgccgata agcgagcggg ctttgttggg
      481 gttttcgagg ctgaatttcg gatgctgcaa ggcggtttga acctgttgca gggtgtcgct
      541 gcggcggctt aagccgacga gggcgaaata tttgtccatc accagcgcgt cgtctgaaaa
      601 cttgtcggca aactgagcca gcaggcggtt gcgcgtatcg ctttcgttgc cgttgacggc
      661 ggacaggatg ccccattcgt gggtcatgtt ttgcgccatt tcgccgtatt tttcggcaac
      721 ggtttcgatg tgcgcagggt cggcgcgcag gacgaaggcg cggcagacgt tgcgcagcgt
      781 gcgccagccg gcagcttcgg ggctgtactc gtagctttgg ttttcctgct tcgccgcctg
      841 acggttcaat tcatgccatt tcggcaggaa gcggacggca agcgtatcca acaaggcttc
      901 gcgcgcctga tggtagcgca gcgggtcgat gttttctgcg ccgtcccaca gttcggcttc
      961 agacggcaca cccaaaagca gggctttgaa ggcgttgtcc aagaggccgt ctgaaatgac
     1021 tttttcgacg gcggcaagca gtttttcgtg tttcggcaac ccgatgccgt ctgaaagcgc
     1081 ggcaaggttg gcggcgacgg cgcggcggta gagcgtttgg gcggcttccc agcgcgtgaa
     1141 ggcgtcgctg tcgtgggcga gcaggagcag caggtcgtcg tcgctgtacg gatagttcag
     1201 atgcaccggc gcgctgaacc cgcgcagcag cgagggaacg acggcttcgg ttacgccttc
     1261 gagcaggaag atctgttcgg cttcggtcag cagcaatacg gcttcggttg cgcgtttgcc
     1321 ctgataatcg aatgccgccg cttcgccgtt gcggttcagc agcccgattt tgacgggaat
     1381 catcatcggc tgcttgtccg ccatatcggg cgtgggcggc acggtttgtt taatggtcaa
     1441 ctcgaaaaca ttgtttttca gacgaccttc cgcttccaaa acgggcgtgc ccgcctggct
     1501 gtaccacaag gcgaactggt cgagattaat gccgttcgcg tccgccattg tcgcgcggaa
     1561 atcgtcgcag gtcacggctt gcccgtcgtg gcgttggaaa tagagcttca tgcctttttg
     1621 gaagccctct tcgccgagca gggtgtgata catccgcacc acttccgcgc ctttttcata
     1681 aacggtcatg gtgtagaaat tgttcatctc ctcatagctg gcggggcgca ccggatgggc
     1741 ggtcgggcct gcgtcttcgg ggaactggtg ctggcgcagc aagcggatgt tctcgatgcg
     1801 gcgcacggcg cggctggcgc ggtcgccgga aaattcttgg tcgcggaaca cggtcaaccc
     1861 ttctttcagc gaaagctgga accaatcgcg gcaggtaacg cggttgcctg tccagttgtg
     1921 gaaatattcg tgtccgacca cggattcaat gccttcaaaa tcggtatccg tggcggtacg
     1981 gctgtcggcg aggacgaact tggtgttaaa gatgttcaaa cccttgtttt ccatcgcacc
     2041 catattgaaa tcacccacgg cgacgaccat gaaaatatcc aagtcgtatt ccaaaccgaa
     2101 gcgcgtttcg tcccacttca ttgcgttttt cagcgattcc acggcaaagc cgaccttggg
     2161 cttgtccgct tcggtggtgt aaaactcgat tttgacgttt ctgccgctca tggtggtgaa
     2221 atagtcttcc gtgaccgcca aatcgcccgc gaccaaagca aacagataac tcggtttggc
     2281 aaacgggtct tcccatttca cccaatggcg gccgtctgaa tactcgccgc cgtcgatttt
     2341 gttgccgttg gagagcaaaa cgggatagcg ttttttgtcc gcaacgatgg tggttgtgaa
     2401 cttggacatc acatcaggac ggtcgatgta aaacgtgatt ttgcggaagc cctccggctc
     2461 gcactgggta aacagattgc ctccggaagc atacagcccc atcagcgatt tgttttccgc
     2521 cggcaggatt tcggtttcca cttcgacggt gaagcgttcg gacggcacgc ccgcaatcgt
     2581 cagcgtctcg ccttccaaca tataatccgc caccgccccg ttgattttga cggacaaaag
     2641 tttcgccgaa ccgtccaaca ccagcggctc ccccaccctc tgcggctcga ccgtcaaacg
     2701 ggatttcacg acggtttgcg gttcggcaat atcgaaatgc aggtcggttt cgagaatacg
     2761 gtaggcaggc gtttggtaat ctttcagata acggacggtt ttgctcattt ttttctttca
     2821 atattgtttg gtttgactgg aaaaggcttc agacggcatg ggcgcatccc gcgtatgccg
     2881 tctgaaaccg aaacggcggc acaagcgtac cgccttcgga cagcagtttt tctatttcca
     2941 cgcttggaca aattctgccc aatgcggttt gtcttctgtt tgggcggaaa gatagtttct
     3001 gatccgcttg atttccattt cgtattcgtc cgcgtcgaat ctgccgctga ccagacaaaa
     3061 acgcagatac atcaaatacg tattcacggc atcggtttca caataattgc ggatttcctt
     3121 caatttaccg gcatggaatg cctcccagac cttgctgccg tccataccca atttacccgg
     3181 aaaaccgcac agtttcgcca tatcgtccag cggcacattc gccctcggct ggtaaagcgc
     3241 gagcaaatcc atcaaatcgc aatgacgttg gtggtagcgg ctgatgtagt tgttccactt
     3301 gaaatcgcgg ctgtcgccga aatcgccgtc gcccatatcc caatagcgcg cggcgttaat
     3361 gccgtatatc agggagcggt aatgcagaac cggcaggtcg aaaccgccgc cgttccaact
     3421 gaccagttgc ggcgtatgtt tttcaatcaa ttcgaaaaat ttggcaatga ccacttcctc
     3481 gccgtcatcc atctcgccga ttgtaccgac atggacttta tcctgccccc aacgcataca
     3541 gcacgaaatc gccacaacct gatgaagatg atgctgcata aaatcgccgc ccgtttgggc
     3601 gcggcgtttc tgctgggcaa acagcaccac ttcatcgtcg ggcagcgagg acggcagctc
     3661 gtacaatgtt cggataccct gcacatcggg tacggtttca atatcgaaag ccaaaatcgt
     3721 attcatggca gtaccttgca ttcaaaaaca gacttgcgcc tattgtgtca ttaaaaggcg
     3781 gataaaaaaa gaggcaaccc cccacaggat tgccccaata cctcaaatca gagatttacg
     3841 cttcacaaac aatacaggct ttcgcctgcg gctttgcccg cgtagctcaa ctctacgccg
     3901 gcaaactttt gtttcaccgt ttccgatgaa accccgacca atcgcaagat tgaccggaaa
     3961 atcctttcag acggcatttc ctgcctgtcg tgtaattcca tgtagcgaaa tgtacgccat
     4021 tttctacgct ttgccaagca ttttttacaa tataaatgtc aaaacattaa ttttataaaa
     4081 ttgctgaaaa tattaaatat atgaattttt attttaaata ttttaataaa tataaattta
     4141 attttgattt atatttaaat ttaagcataa aatgttaaat attaaaggca atatgaaagg
     4201 catatattaa atatttattt ataacgctat gtttttaaag aaaattaatt ttaatatatt
     4261 aactagattg tctgcagata ttcatgggtt tgcggtattt cttccaaaac ctgcttcgaa
     4321 ttttccgagc aagtcttaaa aatattgttt tttgagatac ttaaatagca gcgattatca
     4381 aatgaaatct gttcatataa tctgccattt cgcatttaaa aaaacaaaca ggagtttcga
     4441 ctcgaaacgc ctgatatgtt ttgtaatttt acgtagtcag taaaaatcgg ggctgccttc
     4501 cggacgggtt ttgaaacgct tgtgcagcca aaaatactgc tcgggatgtt cgcgcacgcg
     4561 ttcctcgata aaacggttca tacgctgcgc gtcggcttgc gcatcttcac tcggaaagga
     4621 ttcccaagca gggtagaaat gcaatgtaac cgtattgtcc tcctccctga cgggaatggc
     4681 gggtatcact tttgcatttg caagcgcggc aatgcggctc aatccggtaa tcgttgccgt
     4741 ctgaataccg aaaaaatcca caaaaaccga atcgttgcgt ccgaaatcct gatcgggcag
     4801 atacagaaac ggcgcgctgc ctttgcggaa ctgtttgacg agggcgcgca gcccttcggt
     4861 gcgcccgata aggaaaacgt tgtgataacg gttgcggcct ttcaaaatct gttcgtccaa
     4921 tatcttgttt ttttggtggg aatacatact aattagcgga acatcctgat taagcgcgta
     4981 caccgccatc tcgaacgcgg taaagtgcgg atacaggatg atgacttttt cccccgccgc
     5041 cagcgcgtcg tccaaataat gcttattgcg gtaacgcacc agcgatttca ggcgtttggc
     5101 aggcgcatac caatataagc cgtattcaag catcagtttc gccatatgtt tgaaatgctg
     5161 cttcaatacg gtttcgcgct tttttccgtc ccactcggga aagcattttg ccaaattgat
     5221 ttcgccgata cggcggcggg gtttgaccaa aaggtaggcg agcaaacccg tcaggtcggc
     5281 aagtttgtgc agcagcgcaa acggcagaaa ctgcaaaaca tacagtacaa aaaatataaa
     5341 tttcatctcg atacacattt tcttttcaga cggcaaaata caaatgccgt ctgaaactat
     5401 tgaaacctgc cgcgcttgac ctgcatcccc gaaggattga gtttggcggc aagcccgtgg
     5461 ttgcgtaagg cgtgggtcag cgcgacggca agaccgtccg ccgcatccgc ctgcggcgtt
     5521 cccgaaagcc ccagcatctg caccaccata tgctgcacct gttctttcgc cgccttgcct
     5581 ttgccgacta ccgcctgttt gacctgcaag gccgtgtatt ccgaaacggg cagcttatgg
     5641 ctgaccaatg ccgccaatgc cgcgccccta gcctgaccca gcatcagcgt cgatgccgga
     5701 ttgacgttga cgaacacctg ttccaccgcc gcctgctgcg gcttgtaaac ggcaacgact
     5761 tcgccgatgt gccgcacaat cacggcaatc ctgtctgcca gaggcgcatc gggaggcgtt
     5821 ttgatgcagc cggaggcgac gtaaaaatga tcgcgccccc tgacatcgat gatgccgaaa
     5881 cccgttacgc ggctgcccgg gtcgatacct aagatacgga cggttgccga catattcaca
     5941 gcaaaccgtg ttgaatcagt tttttacgca aagtattgcg gttcagtccc aacatgacgg
     6001 aggctttgga ctggttgc
//
LOCUS       DAWGBY010000117         5991 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.117, whole genome shotgun sequence.
ACCESSION   DAWGBY010000117 DAWGBY010000000
VERSION     DAWGBY010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5991
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.117"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..609)
                     /locus_tag="WHG62_001740"
     CDS             complement(<1..609)
                     /locus_tag="WHG62_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725813.1"
                     /translation="MNITIVAPYCSLPSEPHFNRFRYLAELLSQSHDVLLITSNFKHY
                     DKSFRRPEDAEAASQGRLKVMLLEESGYGKNVSLGRLASHHRFVRHFEKWLENCRPGE
                     QDIVYSAYPLIATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHNLLPFA
                     SRANQAYRCADALVAVSQTYLDRAKEANPNVPGEAVYIGTDFA"
     gene            complement(629..1704)
                     /locus_tag="WHG62_001741"
                     /pseudo
     CDS             complement(629..1704)
                     /locus_tag="WHG62_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            complement(1701..3122)
                     /locus_tag="WHG62_001742"
     CDS             complement(1701..3122)
                     /locus_tag="WHG62_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEZ1725814.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVSKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFR
                     AIEANTPPARLSATAESASALLAAAVCLTGIFSPLASLLLPENYAAVRFIVVSCMLPP
                     LFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACAASFW
                     LFFVFKTESSCRLWQPLKRLPLYTHTLLCLTSSAAYTCFGTPANYPLFAGVWAVYLAG
                     CILRHWKDLHKLFHYLKKQGFPL"
     gene            complement(3317..4426)
                     /gene="ribD"
                     /locus_tag="WHG62_001743"
     CDS             complement(3317..4426)
                     /gene="ribD"
                     /locus_tag="WHG62_001743"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ1725815.1"
                     /translation="MFSDTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQVVGQG
                     FHVKAGEPHAEVHALHQAGEMAQGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYRKHAHVRILMPSETAGGK
                     IDLNSLMRLLADEGIGELIVEAGSELTSAFLAEDLADEIVLYRSPKILGSGKDLFSLP
                     ENRAALSAPPLWMPVSTEILGHDIKTVFRKNGNAF"
     gene            complement(4459..4923)
                     /gene="nrdR"
                     /locus_tag="WHG62_001744"
     CDS             complement(4459..4923)
                     /gene="nrdR"
                     /locus_tag="WHG62_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ1725816.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDEAVRLTEHRLYTSGQRD
                     IPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKTDRKA"
     gene            complement(4953..5795)
                     /locus_tag="WHG62_001745"
     CDS             complement(4953..5795)
                     /locus_tag="WHG62_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ1725817.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVIAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSAEEGLKIARAA
                     GVAV"
BASE COUNT         1225 a         1517 c         1987 g         1262 t
ORIGIN      
        1 ggcaaaatcc gtaccgatat agacggcttc gccgggtacg ttcggattgg cttctttggc
       61 gcggtcgaga taagtctgcg atacggcaac cagcgcgtcg gcgcagcggt aggcttggtt
      121 ggcacgtgaa gcaaagggca gcaggttgtg cggtactttt ttcaaaaacg gtacgactga
      181 ggagaaggac tccggccata cgtcctgcac atcgacaatc agtttgtagc ccaaacgtgc
      241 tttgtgtttg cccaacagca ggttggtggc aatcagcgga taggcggaat agacgatgtc
      301 ttgttcgccc ggacggcagt tttccaacca tttttcaaaa tgtctgacga agcggtgatg
      361 gctggccaag cgtcctaaag acacgttttt gccgtagccg ctttcttcca acagcatgac
      421 tttcagacgg ccttgtgagg cggcctcggc atcttcgggc cgtctgaaag atttgtcgta
      481 gtgtttgaag ttgctggtaa tcagcagcac gtcatgcgac tgcgacaaca gctcggcaag
      541 ataccgaaag cggttgaagt gcggctcgga cggcagcgag caataagggg cgactatggt
      601 gatgttcatc ggcggctttc agacggcatt acatggtata cgccgccatg gtggtgcggt
      661 agatttcgtc gtcggagcat aaggtttcga catgtttgtg cagggctttg cccatttggc
      721 tgcgcaactc tggatgcttg atgagtgtat cgacggcttc gataaatgct tcgtcgtcgc
      781 cgaaaggaat gcagtagccg gtttggccgg taatgaccat ttcggaaatg cccgccatgt
      841 tgtaggtcac gacaggcgtg tcgtaaaggc cggcttccaa aatattgttg ccgacacctg
      901 cgccgtgatc gcccacgcaa tgcggcgtgt tcaccaaaat atcgacttct ttgaagtagc
      961 cggtcaaatc gcggacgccg ccgaggaagg tgactttgtc ttcaatgccc aaacgtttgg
     1021 cttgggcttt gaggttgtcc atttcttcgc cgatacctgc aacgttgagg cgtacaggca
     1081 taccgcggtc aaccattttc ttcaaaatat ccaacatcag atgcacggcg cggacggtgt
     1141 ccaaacggga aagtgtgccg agtacggcgc attctttttt ggttttccgg aaatgaaatt
     1201 ccgggggggg ggggggagtg cgttgtaggc gtaggcaatc cggccggcgg ggaagccgtg
     1261 gcggatgagt ttttcgcgct cgtgtttaca gttgccgatg atgtacacgc ccagcttgtc
     1321 gaagagcttg gcgattttgg ggtaggttgc cgcgtccaaa ccgtgcgagt ggtagatgat
     1381 tttggttttc ggcgaaacga ttttggcggc aagggcgcag gctggaacaa cgcgcgccat
     1441 ttggtagtcg atgatgtcgg gttgttcgcg gcgcagcatc cgggcgtagg caaaggtgct
     1501 tttgaggtag ccggcaagcc cgccccggta aaaatcaacc ggctgccaac ggatgcccga
     1561 tgcttgcgcc tctccgacaa aaggcccgtc cgaagaagca aggatgatgt cgtgcccgcg
     1621 ccgtttgagc agccgcccga ggcggacggt ggcggtttcc gtgccgccca agcccgacat
     1681 agaagtggtc aggatgattt tcataatgga aacccttgtt ttttcaaata atgaaacagt
     1741 ttgtgcaaat ctttccagtg gcgcaggatg cagcctgcca gatataccgc ccatacgccg
     1801 gcaaacaggg ggtagtttgc cggtgtgccg aagcaggtgt aggccgccga ggaggtcagg
     1861 cagagcaatg tgtgcgtata aagcggcagg cgtttgagcg gctgccacag gcgacaggag
     1921 ctttctgtct tgaaaacaaa aaacaaccag aatgaggcgg cacaggcaac cgccgcgccg
     1981 cgcgcgccgc cggacggtac ggcaagcccc agcagcagca ggtttgccgc cagcgcgccc
     2041 aaggtggcga gcgcgatcgg gcgtgttttt cggacgacgt tcaaaccgat gccgctgatt
     2101 tctaccagcg tgcaaaacag cggcggcagc atacacgata cgacgataaa ccggacggcg
     2161 gcgtagtttt ccggcagcag gagggaggcg aggggcgaga aaatgccggt caggcagacg
     2221 gcggcggcaa gcagggcgga ggcggattct gccgttgccg agaggcgggc gggcggggtg
     2281 tttgcttcga ttgcgcggaa aatatacggt gtccagaccg ttgaaaagat gctttggaac
     2341 aataatgccg ccccgccgaa cgaaataccc atcgaataaa cgccgagctg ttctaggccg
     2401 gcatattttt tcaggaacaa acggtcggcg gatgccagcc cccaataggc gatgctgctt
     2461 agtgcgatcg gtatgccgta gcgcaggccg cgatgcagga cggcggatga aaacggtgcg
     2521 cgccggacgg ccttcagacg gcatcggttt tgaaacagca aaaaggcggc ggcggcaagg
     2581 tttgccagcg cgtaaacggc ggtcaggacg gcggtgttcg ccggaaagtg cagcagcccg
     2641 accgtcagcg gcagcagcag caggatggcg agcttggaca cgagttgcgc ggacgaaaag
     2701 gcaagggcgc gcccttccat acgcaaaacc agtaagagaa agcggatggg caggaagctc
     2761 agttcaaaca gcaccagccc gatgccggcg gcggcatcgt cgagcgaaaa caggatttca
     2821 gacggcaggg acgggcggga aagcagcagg gcggctatcg cggcggcaga cagcagcggc
     2881 ggcaggaaca gggttttgaa caaggtgtct ttgtcggcgg cggcatagta ttcgcggacg
     2941 tatgcctgat ccagcccgag gcacaatacc gacacagtca gtcccgccgc cgtctgcatc
     3001 agcacgatgc gcccgatgtc gtcggcgggg aaataccacg acagcagcgg caggatgatg
     3061 acggctaaaa ccgcgctgcc gatcgagcct gccgcgtagc cgaggatttc ttttgtgtcc
     3121 atttttgatg tccgggcggc ggcgggatgc tgcctgtgtc gtctgaagcc tttcttgatc
     3181 ggaatttgac ggctttcaga ccgtcgcggc tgccggcggg gtgcggcagt ccgggtcgcg
     3241 cttttccggg cgggcggcgg tctgaacggg gccgtttttt atcggcgtta ttatatagtg
     3301 aaacggcgca aaccttttaa aaggcgttac cgttttttcg gaacacggtt ttgatgtcgt
     3361 gtccgaggat ttcggtggaa acgggcatcc acaagggcgg tgcggaaagg gcggcgcggt
     3421 tttcgggcag ggaaaacagg tctttgccgc tgccgaggat tttgggcgaa cggtacagca
     3481 cgatttcgtc tgccaaatct tctgccaaaa atgcagatgt gagttcggag cctgcttcga
     3541 ctatgagttc ccctatgcct tcgtcggcaa gcaggcgcat caggctgttc aaatcgattt
     3601 tgccgcctgc cgtttcagac ggcatcagga tgcggacgtg ggcgtgtttg cgataggggc
     3661 ggagtttgtc ttcatcgcgt tccaaggtgg cgatgtaggt tggagattgt ccgtcggtca
     3721 gaaggtggct gtccaagggc aggcgcaggc ggctgtctaa aacgatgcgt gcgggttggc
     3781 gcaaagttgg aaaagcgcgg acgttgagcc ggggattgtc cgccaacacc gtgccgatgc
     3841 cggtcagcac cgcgcagctt tcggcacgca aaacctgtac gtcggcacgc gcgtcttcgc
     3901 cggtaatcca aaagctgctg ccgtctgaaa gggcggtttt gccgtccagc gaaacggcgc
     3961 atttgaggcg gacaaagggg cggcggcgtt cgatgcgcga caggaagcct cggttgagtt
     4021 cccttgcctg atgttcgagt aaaccgcatt ccgtcttgat gcctgctgct tcgagcaggg
     4081 caagcccttt gcctgcaacc agcgggttgg ggtcgcgcat ggcggcaacg acgcgggaca
     4141 cgcccgcccg caccagtgct tcggcgcagg gcggtgtgcg tccgtaatgg ctgcatggtt
     4201 cgagggtaac aaaggcggtc gcgccttgag ccatttcgcc cgcctgatgc agggcgtgga
     4261 cttcggcgtg cggttcgccc gctttgacgt ggaagccctg cccgacaact tggctgccgt
     4321 gtgcgataac gcagccgacg cgcggattgg gcgaagtgga aaaacgcccc aaagcggcaa
     4381 gtcggagggc ggtttccatc atggatatat ctgtgtccga aaacatgggg ataccgtatc
     4441 agtatgggtt ggggagaatc aggctttgcg gtctgttttg acggcttgcg ccagccacga
     4501 ggcaaagtct gccggattgt cgaagcgttt gtgcagggcg gcgaaacgga cggcggcttc
     4561 cgtatcttgt cggagcagtt cttttagcac catgtcggca agtgcggcag aggggatgtc
     4621 gcgctgaccc gaagtgtaga gcctgtgttc cgtcaggcgg acggcttcgt cgatctgttc
     4681 gggtgtcagg gcggattttc gggcggcggc ggtcaggtcg ttgcggaggc gttgtgcatt
     4741 aaagggcgag cgttttttgt ccggaccgat gacggcgggc attttgagtt cggcggtttc
     4801 gagcgtgccg aagcgtttgc cgcagttggg gcagtggcgg cggcggcgca cggcgttgcg
     4861 ttcttccatc agacgcgaat cggcaacgcg ggtgtcgggg tgggcgcaaa acgggcattt
     4921 catcgggttc gtcctcctat gtcgtctgaa gttcagacgg cgacgccggc ggcgcgggcg
     4981 attttcagac cttcttcggc actcatatag acggggtttt cgggacggtc gtgtcggacg
     5041 atgttgcctt cgcggaacat gaccagttcg tccacggcaa gttgggacca tgattcgtcg
     5101 cgggtcagtg gcagggtggc gataacggcg acgcggtcgg agggcgtggt tacttcggca
     5161 aaatcgacca tcacgtcgtc gtcgagcagg cgcgccttgc cgaacggggc ttggcggacg
     5221 atgtagtgca gcagcgtgct ggcgtgggca aacagggcaa tgccgtctga aagcataaag
     5281 ttaaacagcc cgaacttgcg gatttcgtgc gtcagccccg caatcgcgtc aaacagcgtg
     5341 tcgtcgtcgg gacgggcggc aaagcgggtg cgcaggcggt tgaggatgtg gcagaacgcg
     5401 cgttcggaat cggttgtgcc gacggggtgg aaaaattcgc cctgttcggg gaaaaaatca
     5461 atcaaatgtc cgttgtgggc aaacagccag tagccgcccc acatttcgcg cataaaggga
     5521 tgggtgttcg ccagcgaggt ttgtccttgc gatgctttgc ggatatgtgc gatgacgttt
     5581 tccgatttga tttggtaggc acgcacgagg tcggcgacgg gggaatttgc gctcggcttg
     5641 tcgtcgtgga acaggcgcac gcctttgcct tcgaaaaagc cgatgccgaa accgtcggca
     5701 tgatggtcgg taatgccgcc gcgccggcgg aagccttcaa aggaaaacat aatatcggtc
     5761 ggcgtattgc agttcatgcc cagcagttga cacatagttt gtcccaatga ttcagatggt
     5821 cgcaagtatt cggattatac cccgaactga aaatgccgtc tgaaatacgg cttgttcccc
     5881 gttattccct cgaaaacaga aaacaaagac ggaaacttaa gattccgtca ttcccgcgca
     5941 ggcgggaatc cgacttgtcc ggttttggtt gtttttcgtt ccgtaacttt t
//
LOCUS       DAWGBY010000118         5967 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.118, whole genome shotgun sequence.
ACCESSION   DAWGBY010000118 DAWGBY010000000
VERSION     DAWGBY010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.118"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(84..671)
                     /locus_tag="WHG62_001746"
     CDS             complement(84..671)
                     /locus_tag="WHG62_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ1725818.1"
                     /translation="MEHKLPQLPYEPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTSKGQGKPAGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWNEVAKRFAALS"
     gene            834..2240
                     /gene="dnaB"
                     /locus_tag="WHG62_001747"
     CDS             834..2240
                     /gene="dnaB"
                     /locus_tag="WHG62_001747"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ1725819.1"
                     /translation="MNDYTAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
     gene            2549..3217
                     /locus_tag="WHG62_001748"
     CDS             2549..3217
                     /locus_tag="WHG62_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ1725820.1"
                     /translation="MCTRKQQGFTLTELLIVMAIAAIMAMIALPNMSQWIASRRIASH
                     AERVANLLRFSRGEAVRLNLPVYICPVQVKKDGAPNNKCDSGKKGQGMLAFGDKNGNK
                     IYDNDTADVLLRSVVLNDDINNKRINYAFNHIAFGQTQQTADRVVWTFNQNGTFGYTK
                     DQHLTSKSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRNDRRTV
                     CQYK"
     gene            3247..3858
                     /gene="pilV"
                     /locus_tag="WHG62_001749"
     CDS             3247..3858
                     /gene="pilV"
                     /locus_tag="WHG62_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ1725821.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHTLSAVDGDFQVDAI
                     KTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCDASAN
                     GDTLIKVLWVNDSAGDSDINRTDLETNGNNIVYTYQARVGGRE"
     gene            3855..4802
                     /locus_tag="WHG62_001750"
     CDS             3855..4802
                     /locus_tag="WHG62_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ1725822.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLSAQQDLRNAATLIVRDARMAGGFGCFNMSEHPATDVVFDVVQKNRL
                     FSLNLKRNSTNKLIPITESSNINYPNFFQVDSALIFQYGIDDVNASTATTVVSSCAAI
                     SKPGKQIPTLEDAKKELKIPDQDKEQNGNIARQRHVVNAYAVGRIADEEGLFRFQLDD
                     KGKWGNPQLLVKKVRRMKVRYIYVSGCPEDDDAGKEETFKYTDKFDSSTNAVTPAGVE
                     VLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            4781..5380
                     /locus_tag="WHG62_001751"
     CDS             4781..5380
                     /locus_tag="WHG62_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ1725823.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGEGLCTAVNVRT
                     NTNNDNEEAFDNIVVQGKPTVEAVKRFCPANSTDLCIDKKGMKYKKGTRSVSKMPRYI
                     IEYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            5385..5858
                     /locus_tag="WHG62_001752"
     CDS             5385..5858
                     /locus_tag="WHG62_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ1725824.1"
                     /translation="MEQKGFTLIEVMIVVTILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK"
BASE COUNT         1631 a         1315 c         1540 g         1481 t
ORIGIN      
        1 aaaagcagca ggaatttatc ggaaataact gaaattcaat accgcaaaaa tctacccgaa
       61 atgatatagc ggattaacaa aaatcaggac aaggcggcga agcgtttggc gacttcgttc
      121 cagttgacga tttcccaaaa acctttcagg tagttggggc ggctgttgcg gtagtcgatg
      181 taataggcgt gttcccacac gtcgcaggtc agcagcggcg tgttttcagt ggtcagcggc
      241 gtagcggcgt tggaagtgga aaccaaatcc aatccgccgg caggggtttt taccagccac
      301 gcccaaccgg agccgaaagt accggccgcg caggcattga acgcttcttg gaatttctcg
      361 aagctgcccc atttcgcgtc gatggcggcg gccagttcgc cggcaggttt gccttgacct
      421 ttggacgtga aacccagcca gtagaaggtg tggttccaag tttgcgctgc gttgttgaac
      481 acgccgcccg aagatttttt cacaatctct tccaaaggca ggttttcaaa ttcggtgcct
      541 ttgatttgat tgttcaggtt ggtgatgtag gtttgatggt gtttgccgta gtggaattcc
      601 aaagtctctt tgctcagatg cggggacaat gcgtccggtt cataaggcag ttgcggcagc
      661 ttatgttcca ttttgtgctc ctaatattgt tttaaatgtt gtattttggc agtgttgctg
      721 caaatagctt ggcagcgcac atattttacc tgttttgagg aatggaaacc aattaaacct
      781 gctttacgct ataatagaag attgcaattt cggcacgaca gataggatgt accatgaacg
      841 attacacagc catgccgtct gaagaccgtg aggtcggcgc attgtcgctt ccgccgcact
      901 caatggaggc ggaacaatcc gttttgggcg ggttgatgct ggaaaatccg gcatgggaca
      961 ggattgccga tgtggtttcg ggagaggatt tctaccggca tgaacaccgc ctgattttcc
     1021 gttccattgc caaattaatc aatgagagcc gtcccgcaga tgtgattacg gttcaggaag
     1081 atttgcagcg gaacgaagaa ttggaagcgg caggcggatt cgaatacctg attacgctgg
     1141 cgcaaaacac cccgtctgcc gccaacatcc gccgctacgc cgaaatcgtg cgcgagcgtt
     1201 ccattatgcg ccaactcgcc gaagtgggga cggaaatcgc ccgcagcgcc tacaatccgc
     1261 aaggcaggga cgcggggcag cttttagacg aggcggaaaa caaagtattc caaatcgccg
     1321 aaagcaccgc caaatccaag cagggctttt tggagatgcc cgatttgctg aaagaagtcg
     1381 tacagcgcat cgatatgctc tactcgcgcg acaatcccga tgaagttacc ggcgtgccga
     1441 cagggttcat cgacctcgac aaaaaaacct cgggtctgca acccggcgac ctgattatcg
     1501 ttgccggtcg tccgtctatg ggtaagaccg ccttttccat caatatcgcc gaacacgttg
     1561 ccgtagaagg caagctgccg gttgctgttt tctcgatgga aatgggcggt gcgcaactgg
     1621 tcatgcgtat gctcggctcg gtcggacgct tggatcaaag cgtcctgaaa accggcaggc
     1681 tcgaagacga acactggggt cgtctgaacg aagcagtcgt caaactctcc gacgcgcccg
     1741 tgtacatcga cgagaccccg ggtttgactg cgctcgaact gcgcgcccgt gcccgccgtc
     1801 tcgcccgtca atttaacaat aagcttggat tgattgtcat cgactacctg caactgatgg
     1861 caggatccgg ccgttccgac aaccgagctt cggagctggg agagatttca cgttcgctca
     1921 aagcgttggc gaaagaattg caagtcccca tcatcgccct gtcgcaattg agccgcacgg
     1981 tcgaatcgcg taccgacaaa cgcccgatga tgtccgacct tcgcgaatcc ggtgctatcg
     2041 agcaggatgc cgacctgatt atgtttatgt accgcgacga atactacaac caagactcgc
     2101 ccatgaaagg ccttgccgaa tgtatcatcg gcaaacaccg caacggtccc gtcggtaaaa
     2161 tcttcctcac atggacggga caattcacca aattcgacaa tgctgcctat attcccgagg
     2221 aggcaaagat agaggattaa atggctatat aaaaatttat taggcgaaat caggcaaaat
     2281 cgtttaaaat catgctgaga gattgcccta aaaaataaaa cgcggtcttg aggcattttt
     2341 gcattcagcc cgcatataat tgaaaatata gtggattaac aaaaatcagg acaaggcaac
     2401 gaagccgcag accgtacaaa tagtacggaa ccgattcact tggtgcttga gcaccttaga
     2461 gaatcgttct ctttgagcta aggcgaggca acgccgtact ggtttgaatt taatccacga
     2521 tacattacca gttaacgttc tattgcctat gtgtacacga aaacaacaag gtttcacgct
     2581 aacagagctg ctcatcgtga tggccattgc agccattatg gcgatgatag ccctccccaa
     2641 tatgagccaa tggattgcat cccgccgcat tgccagtcac gcggagcggg ttgccaacct
     2701 tttgcgtttc tccaggggcg aagccgtccg gctcaatctc cctgtctata tctgtcctgt
     2761 tcaagttaaa aaagacggtg cgcccaacaa taaatgtgac tccggcaaga aggggcaggg
     2821 aatgttggct tttggcgata agaatggcaa taagatatat gacaatgata cggcggatgt
     2881 tcttctccgc agtgtggtat tgaatgatga tatcaataat aagcggatta attatgcctt
     2941 caaccatatc gctttcggtc agactcagca gaccgctgac cgtgtagttt ggacattcaa
     3001 tcaaaacggg acgttcggtt atacgaaaga ccagcatctt acaagcaaat ccagcttttt
     3061 ttattccgac ggttatatcc aaatcgtgct gacagatgcg agagcagttt cagatgccga
     3121 taagaaattc cgttcggcgg tggttttgat taacagcagc ggcagggttg aggtttgtcc
     3181 tagaaacgat aggcgtaccg tatgccaata taaatgattg ttttagtcgg tttgggaaat
     3241 aaaaaaatga agaataatga ttgcttccgc ctgaaaaacc cccagtccgg tatggcgctg
     3301 atagaagtct tggtcgctat gctcgttctg accatcggta ttttggcact attgtctgtt
     3361 cagttgcgga cagtcgcttc cgtcagggag gcagagacgc aaaccatcgt cagccaaatc
     3421 acgcaaaacc tgatggaagg aatgttgatg aatccgacca ttgattcgga cagcaacaag
     3481 aaaaactata atctttacat gggaaaccat acactatcag ctgtggatgg cgattttcag
     3541 gttgatgcca taaaaactaa gacgcagttg gcagaggcac aattgaagag atttagttat
     3601 gagctgaaaa atgccttgcc ggatgcggca gccatccatt acgccgtctg caaggattcg
     3661 tcgggtgttg cgccgacatt gtccgccggc agtacttttt cttcaaattg cgatgctagt
     3721 gcaaatgggg atactttgat taaagtattg tgggtaaatg attcggcagg ggattcggat
     3781 atcaaccgta cggatcttga gacgaacggc aacaatatcg tatataccta tcaggcaagg
     3841 gtcggaggtc gggaatgaga cgtaaaatgc taaacgtacc aaaaggcagt tatgatggta
     3901 tgaagggttt taccattatt gaatttttgg ttgcgggcat gctcagtatg attgtcctga
     3961 tggcggtcgg atcgagttac ttcacatccc ggaaattaaa tgatgcggca aacgagcgtc
     4021 tttccgcgca acaggatttg cggaatgcgg caacattgat tgtccgcgat gcaagaatgg
     4081 cagggggctt cggttgtttc aatatgtccg agcatcctgc aactgatgtt gttttcgatg
     4141 tggtgcaaaa aaaccgtctt ttttccttaa acttaaaaag gaacagtaca aataaactta
     4201 tccccataac ggaatcttca aatatcaatt atccgaattt tttccaggtt gatagcgcat
     4261 tgatttttca atacggaatc gatgatgtta atgcaagcac cgcgactacc gtcgtcagca
     4321 gctgtgccgc aatatcgaaa ccgggcaagc aaatccctac tttagaagat gcaaaaaaag
     4381 aattgaagat tccggatcag gataaggagc aaaatggcaa tatagcgcgt caaaggcatg
     4441 tggtcaatgc ctatgcggtc ggcaggattg ccgatgagga aggtttgttc cgcttccaat
     4501 tggatgataa gggcaagtgg ggtaatcctc agttgctcgt gaaaaaggtt agacgtatga
     4561 aagtgcggta tatctatgtt tccggctgtc ctgaagatga cgatgccggc aaagaggaaa
     4621 cattcaaata tacggataaa ttcgacagct ccacaaatgc tgttacgccc gccggggtgg
     4681 aggttttatt gagtagcggt actgatacca agattgccgc ttcttcagac aatcatattt
     4741 atgcttaccg tatcgatgcg acaatacgcg ggggaaatgt atgcgcaaac agaacacttt
     4801 gacgggaatc ccgacttctg acggacagag ggggtttgca ctgtttatcg tgctgatggt
     4861 gatgatcgtc gtggcttttt tggttgtaac tgccgcgcag tcttacaata ccgagcagcg
     4921 gatcagtgcc aacgaatcag acaggaaatt ggctttgtct ttggccgagg cggctttgcg
     4981 ggaaggcgaa cttcaggttt tggatttgga atatgatacg gacagtaagg ttacatttag
     5041 cgaaaactgt ggagaaggtc tgtgtaccgc agtgaatgtg cggacaaata caaataatga
     5101 taatgaagag gcttttgaca atatcgtggt gcaaggcaag cccaccgttg aggcggtgaa
     5161 gcgtttttgc cctgcaaatt ctaccgacct gtgcattgac aagaaaggga tgaaatataa
     5221 gaaaggcacg agaagcgtca gcaaaatgcc acgttatatt atcgaatatt tgggcgtgaa
     5281 gaacggagaa aatgtttatc gggttactgc caaggcttgg ggtaagaatg ccaataccgt
     5341 ggtcgtcctt caatcttatg taagcaataa tgatgagtaa taaaatggaa caaaaagggt
     5401 ttacattgat tgaggtaatg atagttgtca cgatactcgg cattatcagc gtcattgcca
     5461 taccttctta tcaaagttat attgaaaaag gctatcagtc ccagctttat acggagatgg
     5521 tcggtatcaa caatatttcc aaacagttta ttttgaaaaa tcccctggac gataatcaga
     5581 ccatcaagag caaactggaa atatttgtct caggctataa gatgaatccg aaaattgccg
     5641 aaaaatataa tgtttcggtg cattttgtca ataaggaaaa accaagggca tacagcttgg
     5701 tcggcgttcc aaagacgggg acgggttata ctttgtcggt atggatgaac agcgtgggcg
     5761 acggatacaa atgccgtgat gccgcttctg cccgagccta ttcggagact ttgtccgcgg
     5821 atgccggctg tgaagccttc tctaatcgta aaaaataagg ttgttttgcc gatgccgtct
     5881 gaaaatcaat gttcagacgg catttttatg ggtatagtgg attaacaaaa atcgggacaa
     5941 ggcgacgaag ctgcagacag tacagat
//
LOCUS       DAWGBY010000119         5882 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.119, whole genome shotgun sequence.
ACCESSION   DAWGBY010000119 DAWGBY010000000
VERSION     DAWGBY010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5882
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.119"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            284..1231
                     /locus_tag="WHG62_001753"
     CDS             284..1231
                     /locus_tag="WHG62_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ1725825.1"
                     /translation="MNILSKISSFIGKTFSLWVALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKLSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMAYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1384..2508)
                     /gene="rluD"
                     /locus_tag="WHG62_001754"
     CDS             complement(1384..2508)
                     /gene="rluD"
                     /locus_tag="WHG62_001754"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ1725826.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIIYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVQQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAADPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2507..3310
                     /locus_tag="WHG62_001755"
     CDS             2507..3310
                     /locus_tag="WHG62_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ1725827.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATVRMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3368..5587)
                     /locus_tag="WHG62_001756"
     CDS             complement(3368..5587)
                     /locus_tag="WHG62_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEZ1725828.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         1427 a         1854 c         1422 g         1179 t
ORIGIN      
        1 ttctccgagc tttatatgtt tcaacagagg acggcacatc aagcaccgca ctgcgtgttg
       61 cccgaacgag actaccctcc gattagattc tatcgccata aacagacggg tttcaaccga
      121 aaaggaatgg ggataaagtc catttccgac atctctcggg cgatgccgtc tgaaaaccaa
      181 tctccacttt cagacggcat tgtttaggca cggtcatttt gcaaattaag gttaaggcgt
      241 gtatgcttgc cttcccttaa aaacaaacac gcaacgcatt attatgaata tcctcagtaa
      301 aatcagcagc tttatcggaa aaacattttc cctctgggtc gcgctctttg ccgccgccgc
      361 ttttttcgcg cccgacacct tcaaatgggc ggggccttat attccttggc tgttgggcat
      421 tattatgttc ggtatgggtt tgacgctcaa actttccgac ttcgatattt tgttcaaaca
      481 tcccaaagcc gtcatcatcg gcgtaatcgc acaattcgcc attatgccgg caaccgcctg
      541 gctgctgtcc aaactgttga acctgcctgc cgaaatcgcg gtcggcgtga ttttggtcgg
      601 ctgctgcccg ggcggtacgg cttccaatgt gatggcctat ctggcgcgcg gcaatgtggc
      661 tttgtcggtt gccgttacgt ctgtttccac cctgatttcc ccattgctga ctcccgccat
      721 cttcctgatg cttgccggcg aaatgctgga aatccaagcg gccggtatgt tgatgtccat
      781 cgtcaaaatg gttttgctcc ccattgtttt gggtttgatt gtccataagg ttttgggcag
      841 taaaaccgaa aagctgaccg atgcgctgcc gctggtttcc gttgccgcca tcgtgctgat
      901 tatcggcgcg gttgttgggg caagcaaagg caagattatg gaaagcggcc tgctgatttt
      961 tgcggttgtc gtactccaca acggcatcgg ctacctgctc ggcttctttg ccgccaaatg
     1021 gaccggcctg ccttatgatg cacaaaaaac gctggccatc gaagtcggta tgcaaaactc
     1081 gggcctggcc gccgcgcttg ccgccgcaca ctttgccgcc gcgccggtcg ttgccgttcc
     1141 gggcgcattg ttcagcgtgt ggcacaatat ctccggctcg ctgctggcaa cttattgggc
     1201 ggccaaagcc ggtaaacata aaaaacccta aacgcctttc atcataatgc cgtctgaacg
     1261 gggcaaacga aaccggcggt ttctgcccgg ccccttcaga cggcctttgt ttgaaatcgg
     1321 cggggacgat tgcccggctg ctccggttcg gctgcctgcg ttcgccccgc cttgcaaacc
     1381 gcctcactcc cttacataaa ccacttcgac atcgtagtcg tcttcgttcc aatcgtcatc
     1441 gtcgtccgcg ccgaatttgt cctgccattc ctcttcattg ctcaaagacg aatccaaacc
     1501 ggcttcaaga cggaggacag acaataaatg atatatgtcg tccggaatcg gtgcctcaaa
     1561 cgaaacggtt tcgccgcttt ccggatgggt aaaactcaag cggtaggcgt gcaacgcctg
     1621 acgcgcgccc aaacttttaa cggcttcttt caccgtgtcg ccgcacggat ggcgcgggtt
     1681 gccgtaaacc gggtcggcgg caagcggatg gttggcctca cgcatatgga cgcggatttg
     1741 gtgcgtcctg cctgtttcga gcgagcattc gatatagctg tgcgccagat agcgttccaa
     1801 cactttgacg tgggtaacgg ctggtttgcc gccgaatttg acgactgcca ttttcaggcg
     1861 gttgtgcgga tcgcgtccga tttgggtttc gattttaccg tcaaagggaa cgatgccgtt
     1921 ggcgacggcg cggtaaatgc gtttgaccgt gcgctcttga agctgttgca cgagggaatt
     1981 ttgcgccggc agggttttgg caaccaccat cagcccgctg gtttctttgt ccaaacggtg
     2041 tacgatgcct gcacgaggta cttggctcaa ttcgggacag tgcgccaaca ggccgttgag
     2101 cagcgtcccc gtccagttgc ccgccgccgg atgcaccacc agtccggccg gtttgttgac
     2161 gacgatgacg gtatcgtctt cgtaaataat atccaaagcc ataggctctg gaacaaacgc
     2221 cagattttcc tcactcggac ggacggttac acaaatttgc tcgccgccta tcattttgtc
     2281 tttgggttgc gaaggtttat cgtttacaat aaccgcgcct tctttaatcc atgatgtcag
     2341 gcggctgcgc gagtagtcgg gcagaagttt cgccaacacc gcatccaacc gcccgccggc
     2401 aagctcgagc ggaacggtca gaccgatacg gttttcagtt tcggaagctg acgcaaagtc
     2461 tgaatcgtcg ctataatcgg attcattatc aaaggaagta ttctgcatga aaaaaattct
     2521 tttaacggtt tcattaggtt tggcactgag tgcctgtgcc actcaaggta cggtcgataa
     2581 agatgcccag attacccaag attggagtgt ggagaagctc tatgccgaag cccaggacga
     2641 attgaacagc agcaattata cgcgggctgt caagttatac gaaatcttgg aatcgcgctt
     2701 ccccaccagc cgccatgccc ggcagtcgca actggatacc gcatacgcct attataaaga
     2761 cgatgaaaaa gacaaggctc tggcggcaat cgaacgcttc cgccgcctcc atccgcagca
     2821 tccgaatatg gattacgcgc tgtatctgcg cggcttggtg ctgttcaacg aagaccagtc
     2881 cttcttgaac aaactggcct cgcaagactg gtccgaccgc gacccgaaag ccaaccgcga
     2941 agcgtatcag gcctttgcgg aactcgtcca acgcttcccg aacagcaaat acgccgccga
     3001 tgcaaccgta cgcatggtca aactggtcga tgcactgggc ggcaatgaaa tgtcggtggc
     3061 gcgctactac atgaaacgcg gtgcatacat cgccgccgcc aaccgcgccc aaaaaatcat
     3121 cggcagctac cagaatacgc gttatgtcga agaatcgctc gccatattgg aacttgccta
     3181 ccaaaaactc ggcaaaccac agcttgccgc cgatacgcgc cgcgtgttgg aaaccaactt
     3241 cccgaaaagc ccgtttttga cgcacgcttg gcagcccgac gatatgccct ggtggcgtta
     3301 ctggcattaa gcccatcttc gtaatgccgt ctgaagccgt ttcagacggc attttatgtt
     3361 tcaaacctca ttcaaacggt tttttctgcc aatagaattt ataccctctc aaacgttgag
     3421 ccttcacgcc gccgcgcccc aagccgaatt gcagcgcgcc tgacaaatcg gtacgcagca
     3481 gtttgatgcc gtgtgcgcgg acacggttct gcaccgcttc ggtcggatgt ttgtaggcgt
     3541 tggcataacc gcttgaagca acagcatatt cgggcgagac ggcattgagg aacacgcccg
     3601 acgaggacgt attgctgccg tgatgtccca acaccaaaac ctggctgtac aggttgcctc
     3661 catacttgcc gaccaggctt tcctcgccct tcgtatccaa atcgcccgtt accagcagtg
     3721 ccgcaccgcc cgccacaaca cgcaaaacac aacttttccc attatcatcg atgtttttgc
     3781 gttcagacgg catcaaaaac tcaaaatcca cgccgtccca ttgccaacgc tgttccgcac
     3841 aatgccgcgc cccctcataa aattccggct gcccggcata aatcccgccg ttcggtatct
     3901 tgccgactgc ctgaaaaccg ccgtcgtggt cgctgtcgtg atgcgacaga accagcttgt
     3961 ccaaacggcg gacacccgcc gcattcaaac tcggcacaat ccccatctgc gccgccgctg
     4021 ccgttccggt gtcaaacaaa agatgatgat ttgccgtctg aaccgacacc gacaaaccct
     4081 gccccgcatc ccaaaccgta accgcaacct cattttccgg cacgccgggt gaacggtaaa
     4141 acacaaaccc tgccaacagc aacaccgccc acggacgcaa acccaagccg cgcggcagca
     4201 gcaacagcaa agcggcacac accgccaaca ccaacagcgg caaaggtgcg gaggcaacgg
     4261 caaactcggg cgacacatcg gcaagccaca ccaaaaaccg caaagtatat tccgccaaaa
     4321 atgcccccaa ctgttgcaaa ggcgcaaacg gcacgaccga acccagcaac gccagcggcg
     4381 tcaataccca agaaaaccac ggaattgcca ccgcattgac caaagggctg attaaaggca
     4441 gcgaagcaaa cagataaccg agcaaaacca gcgacaacac cgaagccgcc cactgcccgc
     4501 gcaaagcagt ttgccgtttt ccctcgtgca aacgccccga gcacgcccat atcagggccg
     4561 ccaccaaacc gaaagacagc caagtcccca cacccaagac cgccgacggg tcgaacagca
     4621 gcaccgccgc caacgcctgc caccacgtcg cccacgccga caatcttccc ctgcgccaag
     4681 cccacgcaaa cgccgccaac atcaaaacgc tgcgctgcgt cggcacggaa aaaccggcaa
     4741 gcagcgcgta aaacagcgcg cctgcacacc ccgccgccaa aacccacgcg cgcggccggg
     4801 caggaaggcg cggggaacag gcaagcagcc gcttcgccag ccacgcaaac attaccgcca
     4861 ccatcgtaac gtgcaaaccc gaaatactga ccaaatgcgt cagccccaac ggccggaacg
     4921 cctgccacaa ttcggggcgc aatgccgact gttcgcccac gctcaacgcg cgcatcagcc
     4981 cgatgccgtc tgaaagcccg ccgtccgcat ccgcctgctg ccaattacgg ctgatgcggc
     5041 tgcgccaaac cgcaatcccc caaccgcttc cgccatgcag caaaaccctg tccgcaccga
     5101 ccgtccccgc gccgcctatt ccgttggata atgcccacgc ctcacggttc aaaccgcgca
     5161 ggttcaactc cccgacgaca gggtgcacac gtgccgttat ccgccatctg ctcccgaccg
     5221 cccattcgcg ccgtttgtag tccgacagca gcaaatcaaa cgtccgacca ccgctgtcca
     5281 cagcctttgc cgcaaactgc acacgccgcc cgtccgacct cggcatatcc gccacttcca
     5341 ccgtcaaagg cacgcctgaa acggcttctg cccaccattg ggaagacaat gccgcctccg
     5401 tcctgaatac gccgtaagcc gcgcccgcca acacgcacag catcagaccg gcaaacgcaa
     5461 aacgccttgc aaacacagca aaaaccgcaa aagccgccag ccaaaacagc caatgcggca
     5521 cgaccggcag cgcaaacgaa gccgccgcac cgacaaccca acacggcaaa aaccaacgac
     5581 ggaacacgtc tccccacccc agatatttca aaaataaacg gataataaag caaatccgaa
     5641 aaaccgtcat aacaagattt gaaaatgata tagtggttta aatttaaatc aggacaaggc
     5701 gacgaagccg cagacagtac aagcagtacg ataaggcgag gcaacgctgt actggttttt
     5761 gttaaaccac tataagaatg caaacgaaaa gcctcagtat tatccgagac aacggcaaac
     5821 tttccatcgt cattcccacg aacccacatc ccgttattac cacgaaagcg ggaatctagg
     5881 ac
//
LOCUS       DAWGBY010000120         5823 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.120, whole genome shotgun sequence.
ACCESSION   DAWGBY010000120 DAWGBY010000000
VERSION     DAWGBY010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5823
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.120"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(238..345)
                     /locus_tag="WHG62_001757"
                     /pseudo
     CDS             complement(238..345)
                     /locus_tag="WHG62_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(391..1119)
                     /gene="pdxJ"
                     /locus_tag="WHG62_001758"
     CDS             complement(391..1119)
                     /gene="pdxJ"
                     /locus_tag="WHG62_001758"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ1725829.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFTKILTDAGIRVSLFIDADDRQIQAARDVGAPVVELHTGAYADAR
                     SHAEQIRQFERIQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1143..1934)
                     /gene="recO"
                     /locus_tag="WHG62_001759"
     CDS             complement(1143..1934)
                     /gene="recO"
                     /locus_tag="WHG62_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ1725830.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVSFVPVSASWYGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMPELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHTDGTGGDI
                     LADKTYRLMPEEAVMPVCEDADALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLLIGTLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(1968..3095)
                     /gene="pheA"
                     /locus_tag="WHG62_001760"
     CDS             complement(1968..3095)
                     /gene="pheA"
                     /locus_tag="WHG62_001760"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ1725831.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASSSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3134..4366)
                     /locus_tag="WHG62_001761"
     CDS             complement(3134..4366)
                     /locus_tag="WHG62_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ1725832.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGDSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
     gene            complement(4886..5740)
                     /locus_tag="WHG62_001762"
     CDS             complement(4886..5740)
                     /locus_tag="WHG62_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ1725833.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         1352 a         1672 c         1590 g         1209 t
ORIGIN      
        1 acataatcat cgcctcaata tttaatatcc caaaatatag atttaaaacc atcgcctttg
       61 tggtttgtca gcattcctaa ttgagataga aagtcaaata atttcttgtt tctccggctg
      121 ccatcaagat ggtttagatt aagacctcga acaatacaat acccaatact ctgtactgta
      181 ttgtgaattt cttctatcaa actattattg tttgcagata aaatatactt ttgattcata
      241 tagtgaatta aatttaaacc agtacggcgt tggcttgcct tgccgtacta tttgtactgt
      301 ctgcggcttc gccgccttgt cctgatttaa atttaatcca ctataacata tccctgtcgt
      361 gaaatgctgt ctgaaagggt ttgcctgccc ttacggcagc agccttgccc tgaacatcgc
      421 ctccttcatt tggcgcacgg cttcgggcag tccgaggaag agggcttggg caatcagcga
      481 atgcccgatg ttcagttcgc ggatggcgag gatttgggcg atgggggtaa cgttgtgtat
      541 ggtcagtccg tgtccggcgt tgacgaccaa gcccaaatct ccggcgaaat gcgcgccgtt
      601 ttggatgcgc tcgaactgcc tgatttgttc ggcgtggctg cgcgcgtcgg catacgcgcc
      661 tgtgtgcagc tcgacaacgg gcgcgccgac atcacgggcg gcttggattt gcctgtcgtc
      721 ggcatcgata aacaaagaca cgcgtatgcc cgcgtcggtc aggattttgg tgaattcggc
      781 gattttttcc tgttgcgcca atacgtccaa accgccttcg gtcgtgattt cctgccgttt
      841 ttccggcacg atgcacacgt cttccggcat cactttaagc gcgttttcga gcatttcttc
      901 cgtcaacgcc atttcaaggt tcaggcgcgt gcggatggcg tttttgacag caaacacgtc
      961 cgcgtctttg atgtggcggc ggtcttcgcg aaggtgcatg gtaatcaggt ccgcaccgtg
     1021 cgtttcggca accagtgccg cctccacggg gctgggataa gtcgtgccgc gcgcgttgcg
     1081 gacggtggcg atgtggtcga tgttgacacc taaaagcata atctttcctt ttatttctgc
     1141 cttcagacgg catttgaagc cgtgccgtcc gaagtcggga cggtttcccg ggcggtttct
     1201 ttgcggtcaa actgccgtat ctgttccaac acctgccgcg atttcaagcc ttcgggaagc
     1261 agcgtgccga tcagcagccg tgtgattttc aatgcctgtt gcaggctttc ggcggtgcgg
     1321 aaactgcctt cgcgcaaatc gatcaggctt tgcccttcga caattgcgcc ggcttcgtgc
     1381 gaaagcgcgt ctgcgtcctc gcatacgggc atgaccgcct cttcgggcat cagccggtag
     1441 gttttgtccg ccaaaatatc gccgcccgtg ccgtcggtgt gcaaatcggg ggcaacgccc
     1501 aaggcattga gcagcttcca ctcgaagcgg cgcaaatcgg caatgtggtt ggcttcacga
     1561 cacaccgcct ccatcacttt tgccaacgcg tcgtacagtt cgggcatcgg atcttcgcgc
     1621 gcggtcagtt tcaacaccag ttcgttcaca tacagaccgc tgaacaacgc cctgccctgc
     1681 ggctgccgcc atccgccgac ccattcggca cggtgaaggg ttttgagttc ctgactgccg
     1741 taccacgacg cgctgacggg cacgaaggaa accagcacgc cgcgcaattc gctctgccgc
     1801 ttgcgcgcgc ttcttgccaa aagtgccaca cgcccgtaac ggcggctgaa ggcttcgacc
     1861 cgcaggctgc tttcgcgcca tggcgaggaa gccaacagga agacgggttc gtggttgact
     1921 cggtgttcgg acatcatgcc tgaaatgccg tctgaacgct gccgccgcta caaaacggcg
     1981 gtcgggtacg aaccgatgac tttgacgaac gaagcgcgtt cgcccaagcg ttccaatgcc
     2041 gtctgaatct gcgcgtcccg gcggtgtcct tcgatgtcga tgaagaacag gtattcccac
     2101 aaaacggatt tgctcggacg gctctcaaac ttggtcatgg aaatacccga ttcggtcagc
     2161 ggttgcagca gcgaggcaac cgcaccggcg cggttgggcg cggaaacggc cagcgaagtc
     2221 ttgtcgctgc tgcttgcacc ggtttcgtga tgtcccatca ccaagaagcg cgtggtgttg
     2281 ttcggttcgt cttcgatgca ctcggcaacc atatcgagtc cgtagatttc cgccgccgtg
     2341 cgtccggcga tggcggcaac cgtaccgtcg tccgattcgg caaccagcct tgcggcttcg
     2401 gcattgctgg acacggcaat ccgttcggcg ttgggcaggt gtctgcccaa ccagtcgttg
     2461 cactgcgcca acgcctgcgc gtgggaaaag actttggcaa tgccttcggt gctgccgttg
     2521 tttttacgca aaaggttgtg gtggatgcgc aaaacgactt cgccgcacgc ctgcaacgcg
     2581 gtaacggcaa gcaaatccaa cgtgcgcccg accgagcctt cggtcgagtt ttccacgggg
     2641 gcgaccaaat agtctgcctg acgggtttcg acctgcttga agcagttgtc tatggtcgga
     2701 cacgccatgg tgtgcgcggc gtgtccgaaa tgcttaatcg ccgcctgttg ggtaaacgtg
     2761 ccctgcggcc ccagataggc gatggtcagc gggcgttcga cggcgaggca ctcgctcatc
     2821 acttcccgaa acaggcgtgc taccgattcg tcgggcagcg ggcctttgtt caaatcctga
     2881 atgcggcgca acacggcgac ttcgcgttcg gggcggtaca ctgcgcccgt gcctttcagc
     2941 tcgccgatgg cgtgggcgtg ttgcgcacgt tcgttgagca ggcgcaggat ttcggcatcg
     3001 atggtgtcga tggcgttgcg gtggggaagg aggagttcgt cgatagtttg ggacataatt
     3061 tcgcctgaac agtaatttat cgtgcattct aacatcaaat gccgtctgaa acggtttcag
     3121 acggcatttt ccgttaaagg tattcgctct gttcgttttc cttccacgcc cggtgcgaac
     3181 acagccacag aagcgcaatg ccgcaagagg tggacgcggt catcgttgcc gccatcacgg
     3241 ttgccgaacc gtcgtgcaag aaggtcgccg ccatacccac ccccgcgccg attaaagatt
     3301 ggaatacacc caatacggcg tttgcgctgt cgccctcttc tttgaaataa gacataaagc
     3361 atgcctgcgt gttcgcgccg accaagccct gcgtgccgac ggaaaacatc acgcacgcaa
     3421 ccagcagcca aaatgggggc aacccgaaaa acagcacggc ggcgagttgg gacaggttgg
     3481 cggcaaattg gacgacaatc ccccatagca ggatgctttg cggatgcacg ccggttttga
     3541 gccgccacgc ggtaacgcgg ttgaaaaaca tcatcgtgat gatgttgagt gcaaacgccc
     3601 aagcgtattg atgaggcgta acacggtaaa gctgctggta cacgaaggaa gattcggtca
     3661 gaaaggcgaa catcgaaccg aagctgaatg cctgaaaaaa cagataaccc atcgcggcac
     3721 gggttttcaa tacgcgcttg aaccgccccg ccaccagccc gaacacgtcc ctgccgattt
     3781 tgccgccgac ggcaggcttg ggcaggaaat actgcaccaa accgagcagc accagcgaat
     3841 acgccgccag aaaaacaaaa atcgcctgcc agccacccaa gccctgcaac aatgcgccga
     3901 ccatgggtgc gaccagcggc acaaccatca aaatgatgcc gataagggca aacatctggg
     3961 cggctttgcg tccggaataa taatcgcgca ccattgcgcc gacgatgacc acagtcatgc
     4021 ccgcaccgaa tgcctgcacg acgcgcaggt tgaggagctg ttcggcactc gaagcaaata
     4081 cgatggcggc aacggcaagg cagtagacgg ccagtccggt cagcgcgacg ggtttgcgcc
     4141 ctttgatgtc ggacaccgaa ccgccgacca cctgtccgaa cgccgtgccg aacataaaca
     4201 aactcaggct ctgttcgatg cggtgaacat ccgcgttcag cgactgcgcc atttcgggaa
     4261 tcgcgggcag gtaggcatcg atggaaaacg gcatcagcgt aaccagcatc gccatcaaaa
     4321 ccgccatcag tttttcgctc atttcaggat aatgggcaga aggcataaat tctcgtccga
     4381 ttcgcaaaca aaccgcccgg cggcggaaaa cacaatacgc ggaaacggaa aattttaaca
     4441 caccagcaca aacaggcggc aacaaaagcc ccggcaaaac cggacgaacc ggaacgatat
     4501 agtggattaa caaaaaccag tacagcgttg ccttgcctta gctcaaagag aacgattctc
     4561 taaggtgctt aagcaccaag tgaatcggtt ccgtactatc tgtactgtct gcggcttcgt
     4621 cgtcttgtcc tgatttttgt taatccacta taaaatcccg tcattcccgc gcaggcggga
     4681 atccggacat ccaacgctgc agcaatttgt cggaaataac cgaaactcaa aaaaccggat
     4741 gcccgcctgc gcgggaatga cgatgcaaag atggtcgtta tttcggataa atatccgtct
     4801 tttcgttccg gatacccgct ttcgcaggaa tggagatgga aagatttcag cctattcggc
     4861 aatcatcaaa taccgcttcc caactttatt tttgatgcga cagccggccg gcaaccaagg
     4921 tggcggcgat gacgacaaac acgcccaagg cggacacggg cgacaggtgt tcgcccaaaa
     4981 tcaaaaccgc cagcagcacg ccgacgacgg gttcgagcga aatcaacagt cccgaaacat
     5041 tggcaggaac acggctcatc cccttgttcc acagccaata ggcgtaccag ccgcacccca
     5101 aacccaaata cagcagcgac aataccatcc cgacgctcca gtccacggta taactttgcg
     5161 ccaaagcaag cgaaaacggc aggcacatca acgatgcggc ggcaatggaa acagatgtga
     5221 atgccggtgc gccgatgcgt gcaatcagcc tttgcgtcgg acgcatagcg gcacaaaagc
     5281 ccgcgcccgc caacaacacc agcaggcagc cgaaccagcc gacttcgccg ccctcttccg
     5341 caccgcccgc catcagcagc gcgacaccgg caaatgccgc cgcgccgcat atccagtggt
     5401 aggcacgcgc tttgtcgttg aagaaaaagt gtccgacaaa caccatcagc agtggctcga
     5461 gtccgacaat gaccgatgcg ctggcggcgg aagtgtattt caacccgaca aactgaagca
     5521 gcagggtcag cacatagttg acgaacgaca caatcagcaa cggcttccat tcctcacgcg
     5581 gaatcttgcc gacatgacgg cggcaggcgg gcagtgcagg cagcgcggca attagcaggc
     5641 gcacgccgac catcaatgcg ggatcgatgc cgccatagac atatttggcg gcaataaacg
     5701 agctgctcca gataatcagg gcaaggattt ggtaaaacat agtgagtgat aaagtcagat
     5761 ggtcatacaa aagtatagcg gatgaacaaa aatcaggaca aggcggcgag ccgcagacag
     5821 tac
//
LOCUS       DAWGBY010000121         5724 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.121, whole genome shotgun sequence.
ACCESSION   DAWGBY010000121 DAWGBY010000000
VERSION     DAWGBY010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5724
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.121"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            72..998
                     /gene="fabD"
                     /locus_tag="WHG62_001763"
     CDS             72..998
                     /gene="fabD"
                     /locus_tag="WHG62_001763"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ1725834.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAGHAVVKNTFAEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYSEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVKQICAESAQGEVVEAVNFN
                     SPGQIVIAGNAAAVGRAMAAAKEVGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQVAAFIEAH"
     gene            1136..3001
                     /gene="msbA"
                     /locus_tag="WHG62_001764"
     CDS             1136..3001
                     /gene="msbA"
                     /locus_tag="WHG62_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ1725835.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIIAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            3101..4666
                     /gene="guaA"
                     /locus_tag="WHG62_001765"
     CDS             3101..4666
                     /gene="guaA"
                     /locus_tag="WHG62_001765"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ1725836.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRDIFDDAPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMEKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            4728..5474
                     /gene="fabG"
                     /locus_tag="WHG62_001766"
     CDS             4728..5474
                     /gene="fabG"
                     /locus_tag="WHG62_001766"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ1725837.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         1377 a         1845 c         1391 g         1111 t
ORIGIN      
        1 ttttgtcccg cctgaatttt tcgtaaaact cgggcagaat acctgattat ccaaccaaat
       61 aaaggaatac tatgtctttt gccttctttt ttcccggaca aggttcccaa agcctcggta
      121 tgatgaacgg ctttgccgga cacgccgtcg ttaaaaacac ctttgccgaa gcctccgcca
      181 tattggggca ggacttgtgg gcgatgataa acggcagcga tgccgaaatc atcggtcaaa
      241 ccgtcaacac ccagcccatt atgctcgccg ccggcgttgc cgtttaccgc gcctattcgg
      301 aagcgggcgg caaaacgcct gccgccgttg ccggacacag cctcggcgaa tacaccgcac
      361 tcgttgccgc cggcgcattg gattttgccg acgcggtcaa actcgtgcgc ctgcgcgccg
      421 aactgatgca gtccgccgta ccgcaaggcg tgggcgcaat ggcggcgatt ctcggcttgg
      481 aagatgaaca ggtaaaacaa atttgcgccg aatccgcaca gggcgaagtg gtcgaagccg
      541 tcaacttcaa ctcgcccggg caaatcgtga ttgcaggcaa cgccgccgcc gtcggacgcg
      601 ccatggctgc cgccaaagaa gtcggtgcca aacgcgccct gccgctgccc gtgtccgtac
      661 cttcccattg cagcctgatg aaacccgccg ccgacaaact tgccgaagcc ctgaaaaccg
      721 ttgaaatcaa gcagccgcaa atccgcgtca tccacaacgc cgacgttgcc gcctacgatg
      781 atgccgacaa aatcaaagac gcgctcgtcc gccagcttta cagccccgta cgctggacgg
      841 aaaccgtcaa cgccctcgtt tcagacggca ttgccgaatc cgccgaatgc ggcccgggca
      901 aagtgttggc aggcttggca aaacgcatca acaaagccgc cgcgtgcagc gcactgaccg
      961 atgccggaca ggttgccgcc tttatcgaag cgcactgact tcgttctgca aaaagcagcc
     1021 tgccctcttc aggctgcttt tcatgtccga acggcggcag ccccatattt acgctataat
     1081 ccatcccgac caaaccaccg acagcggctg ccgttgcagt tcccgcccta ccgatatgat
     1141 agaaaaactg actttcggac tgtttaaaaa agaagacgcg cgcagcttta tgcgcctgat
     1201 ggcgtacgtc cgcccctaca aaatccgcat cattgccgcc ctgattgcca ttttcggcgt
     1261 tgccgccacc gaaagctacc ttgccgcctt catcgccccc ctgattaacc acggcttttc
     1321 cgcacctgcc gcgccgcccg agctgtctgc cgccgccggc atcatttcca ccctgcaaaa
     1381 ctggcgcgaa cagtttacct atatggtttg ggggacggaa aacaaaatct ggaccgtccc
     1441 cctcttcctc atcatcctcg tcgtcatccg tggcatctgc cgctttacca gcacctatct
     1501 gatgacttgg gtctccgtga tgaccatcag caaaatccgc aaagatatgt ttgccaaaat
     1561 gctgaccctt tcctcccgct accatcagga aacgccgtcc ggcaccgtac tgatgaatat
     1621 gctcaacctg accgaacagt cggtcagtaa cgccagcgac atcttcaccg tcctcacgcg
     1681 cgacacgatg atcgttaccg gcctgaccat cgtcctgctt tacctcaact ggcagctcag
     1741 cctcatcgtt gtcctgatgt tccccctgct ctccctgctc tcgcgctact accgcgaccg
     1801 tctgaagcac gtcatttccg actcgcaaaa aagcataggc acgatgaaca acgtgattgc
     1861 cgaaacccat cagggacacc gcgtcgtcaa gctgttcaac gggcaggcgc aggcggcaaa
     1921 ccggtttgac gcggtcaacc gcaccatcgt ccgcctcagc aaaaaaatca cgcaggcaac
     1981 ggcggcacat tccccgttca gcgaactgat tgcctcgatt gccctcgccg ttgtcatctt
     2041 catcgccctg tggcaaagcc aaaacggcta caccaccatc ggcgaattta tggcattcat
     2101 cgtcgcgatg ctgcaaatgt acgcacccat caaaagcctt gccaacatca gcatccctat
     2161 gcagacgatg ttcctcgccg ccgacggcgt atgtgcattt ctcgacaccc cgcccgaaca
     2221 ggacaaaggc acgctcgcgc cgcagcgtgt cgaagggcgt atcagcttcc gcaacgtcga
     2281 tgtcgaatac cgttcggacg gcatcaaagc cctcgacaac ttcaacctcg acatcagaca
     2341 aggcgaacgc gtcgccctgg tcggacgttc cggcagcggc aaatccaccg tcgtcaacct
     2401 gctgccccgc tttgtcgaac cgtctgccgg caacatctgc atagacggta tcgacatcgc
     2461 cgacatcaaa ctcgactgcc tgcgcgccca attcgccctc gtctcccaag acgtattcct
     2521 gtttgacgac accctgtttg aaaacgtccg atacagccgt cccgatgcag gcgaagccga
     2581 agtcctgtcc gccctccaag ccgccaacct gcaaagcctg attgacagct ccccgctcgg
     2641 actgcaccag cccatcggat cgaacggcag caacttgtcc ggcggacagc ggcaacgcgt
     2701 cgccatcgcc cgcgccattt tgaaagacgc gccgatatta ttattggacg aagccaccag
     2761 cgcattagac aacgaatccg aacgcctcgt ccaacaagcg ctcgaacgcc tgatggaaaa
     2821 ccgcaccggc atcatcgtcg cccaccgcct gaccaccatc gaaggggccg accgcatcat
     2881 cgtaatggac gacggcaaaa tcatcgaaca aggcacacac gaacaactga tgtcccaaaa
     2941 cggctactac acgatgttac gcaatatctc aaacaaagat gccgccgtcc ggacggcata
     3001 aacaaaatgc cgtccgaaat ggtataatcg ccccgaccct ttcagacggc actatatccg
     3061 ccgacccatc cgattatctt caatcactgt aaaacccatt atgacccaag acaaaatcct
     3121 catcctcgac ttcggttcgc aagttaccca gctgattgcc cgccgcgtgc gcgaagccca
     3181 cgtttactgc gaactgcatt ccttcgatat gcctttggac gaaatcaaag ccttcaaccc
     3241 caaaggcatc atcctttccg gcggccctaa ttccgtttac gaatccgact atcaggccga
     3301 taccggtatt tttgatttgg gcattccggt tttgggcatc tgctacggaa tgcagtttat
     3361 ggcgcaccac ttgggcggcg aagtgcagcc cggcaaccag cgcgaattcg gttacgcgca
     3421 agtcaaaacc atcgacagcg aactgacccg cgatattttc gacgacgcgc ccaacacact
     3481 cgacgtatgg atgagccacg gcgacaaagt gtccaaactg cccgacggct tcgccgtcat
     3541 cggcaacacc ccgtcctgcc cgattgccat gatggaaaac gccgaaaaac aattctacgg
     3601 catccagttc caccccgaag ttacccacac caaacaaggc cgcgccctgt tgaaccgctt
     3661 tgtcttggat atttgcggcg cacaaccggg ctggacgatg ccgaactaca tcgaagaagc
     3721 cgttgccaaa atccgcgaac aggtcggcag cgacgaagtg attttgggtt tgtccggcgg
     3781 cgtggactct tccgtagccg ccgcgctgat tcaccgcgcc atcggagacc aactgacctg
     3841 cgtgttcgtc gatcacggcc tcttgcgctt gaacgaaggc aaaatggtga tggatatgtt
     3901 cgcccgcaat ttgggtgtga aagtgattca cgtcgatgcc gaagggcagt ttatggagaa
     3961 actcgccggc gttaccgatc ccgagaaaaa acgcaaaatc atcggtgcgg aatttatcga
     4021 agtatttgat gctgaagaaa aaaaactcac caacgccaaa tggctggcgc aaggcacgat
     4081 ttaccctgac gtaatcgaat ccgcaggcgc gaaaaccaaa aaagcccacg ccatcaaatc
     4141 gcaccacaac gtcggcggcc tgcctgaaaa catgaagctc aagctgcttg agccgttgcg
     4201 cgatttgttc aaagacgaag tgcgcgaact gggcgtggct ttgggtctgc cgcgcgaaat
     4261 ggtgtaccgc catcccttcc ccggtcccgg tttgggcgtg cgcatcttgg gcgaagtaaa
     4321 aaaagaatat gccgacctgc ttcgtcaggc agacgatatt tttattcaag aattacgcaa
     4381 caccaccgac gaaaacggca cgtcttggta cgacctgacc agccaagcct tcgccgtgtt
     4441 cctgcctgtg aaatccgtcg gcgtaatggg cgacggacgc acttacgact acgtcgtcgc
     4501 actgcgcgca gtcatcacca gcgactttat gaccgcacat tgggctgagt tgccttactc
     4561 actgctcgga cgcgtgtcca accgcatcat caacgaagtc aaaggcatca accgcgtggt
     4621 gtacgatgtc agcggcaaac cgcctgccac catcgagtgg gaataaccag caaacagggc
     4681 tgcaccgtcc ggcgcagtct ttcgattatc ggaaaaaagg aaaaaatatg agcacacaag
     4741 atttaagcgg caaaatcgct ttggtaacag gcgcctcgcg cggtatcggt gcagcaattg
     4801 ccgacacact ggcggcagcc ggtgccaaag tcatcggtac ggcgaccagt gagagcggtg
     4861 cggcggcgat tagcgagcgg ttggcgcaat ggggcggcga aggccgcgta ttaaattccg
     4921 ccgaacccga aaccgtcgaa aacctgattg ccgacatcga aaaaacgttc ggcaaactcg
     4981 atattctggt caacaacgcc ggcatcaccc gcgacaacct cctgatgcgt atgaaagaag
     5041 aagagtggga cgacatcatg caggtcaacc tcaaatccgt ctttcgcgcc tccaaagccg
     5101 tcttgcgcgg catgatgaag cagcgcgccg gccgtatcat caacatcaca tccgtcgtcg
     5161 gcgtgatggg caatgccggt caaaccaact atgccgcggc aaaagcaggc ttaatcggtt
     5221 tctccaaatc catggcgcgc gaagtcggca gccggggcat taccgtcaac tgcgtcgccc
     5281 ccggctttat cgataccgac atgacccgcg ccctgccgga agaaacccgc caaaccttta
     5341 ccgcccaaac cgccttgggc agattcggcg acgcgcaaga cattgccgat gcagtcttgt
     5401 tcttggcttc cgatcaggca aaatacatta ccggtcaaac gctgcacgtc aacggcggca
     5461 tgctgatgcc ctgacgggca gccgtaccga caatgccgtc tgaagccctt tcagacggca
     5521 tttgcattcc caaacaaaat gaacacacgc cacactccgc cctgcccctg cggttcaggc
     5581 acaagctgag gcctttgcaa aattcctttc cctcccgaca gccgaaaccc caacacaggt
     5641 tttcagctgt tttcgcccca aataccgcct aattctactc aaataccctt aatcctcccc
     5701 ggatacccga taatcaggca tccg
//
LOCUS       DAWGBY010000122         5692 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.122, whole genome shotgun sequence.
ACCESSION   DAWGBY010000122 DAWGBY010000000
VERSION     DAWGBY010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.122"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            99..815
                     /locus_tag="WHG62_001767"
     CDS             99..815
                     /locus_tag="WHG62_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ1725838.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            964..1866
                     /locus_tag="WHG62_001768"
     CDS             964..1866
                     /locus_tag="WHG62_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ1725839.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1909..2682
                     /locus_tag="WHG62_001769"
     CDS             1909..2682
                     /locus_tag="WHG62_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ1725840.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEGGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2794..4482
                     /locus_tag="WHG62_001770"
     CDS             2794..4482
                     /locus_tag="WHG62_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ1725841.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFEAGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4575..5531
                     /gene="gshB"
                     /locus_tag="WHG62_001771"
     CDS             4575..5531
                     /gene="gshB"
                     /locus_tag="WHG62_001771"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ1725842.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALEAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFIAPTLVTTRSADVRTFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1322 a         1546 c         1578 g         1246 t
ORIGIN      
        1 aaatttgtgt aatactttga tttccccgac acgatttgaa gcacagccgc cttaaaacat
       61 cttaaaaaat ttgaaagcgt aaaaatacgg aaaacatcat gaactttgaa aacgacgaca
      121 ttatccatgc gccgaccacg tcttccctga ttctcgaaga gcggcacgat tcggagctgt
      181 tccgtgttta cgccctgatt ttggacggca ttaccgatca ggtgctgctg cccggcaaaa
      241 agctgaccga atccgaactt tgccgtcaga tggtgtgttc gcgcaacacc gtccgcggcg
      301 cgctgtcgct tttggcgcac gacaagattg tcgatttgca acccaacagg ggcgcgttcg
      361 tccacgttcc cgatttgaaa gaaatgcagg atgtgttcaa tgcgcgcatc gaaatggaga
      421 cgatgatttt gaatatcctc gcagatttgc cggatttgga aacgcgcctc aagccgcttt
      481 atgcgatgat acggcgcgaa gaagaggcct ccggcagggg cgaccgcgtt ggctggaacc
      541 gcctgtccaa tgccttccac gtcgaactgg cgcgcctggt gggcaacgat gtgctgttcg
      601 acattatgaa cacgctgtgc gcgcggtctt ccctgattgt cgccgtggcg ggcgtgcatc
      661 gcgaggaaaa acacgccatc aatacgcata cgcattcaga acaccgcgaa atcctcgacc
      721 tgctgctggc gggcaggcgc aaccgcgtgg tcaaaatcct gcgccgccat ttgggcaact
      781 gtatggagcg tttggaaaag actttggaag attgaatgcc ggagcggata agccgcctga
      841 accttcaggc ggttttttaa tggcgaacct gatgccgtct gaaatatgga tgcgggtatc
      901 tgcaattttc agacggcaat ttttaaaccg cacatatcat gcggcaataa aggagagcag
      961 tagatggaca gcctgatgac attgctttcg gtattgatac cgatgtttgc cggatttttt
     1021 atccgtgtgc ccaagcctta cctgcccgct ttggataagg tgctatcggt cttggtgtat
     1081 gctgtgctgc tgctgatcgg cgtctcgttg tcgcgcgtgg aggatttggg ttcgcggttg
     1141 gacgatatgg cgttgacggt tctgtggctg tttgtttgta cggtcggggc gaacctgctt
     1201 gctttggcag tgttgggaaa gttattcccg tggcggataa aggggaaagg gaagggcgtt
     1261 tcggtcggcg tgtcgggcag tgtggggcag ctcggatgcg tgctgctcgg atttgcattc
     1321 ggcaaactga tgcgcgatat ttggatgccg tctgaaagcg cgggcatgta ttgtctgatg
     1381 ctgctggtgt tcctcatcgg cgtacagctc aaaagcagcg gcgtatcgtt gcggcaggtt
     1441 ttggtcaacc gcaggggtat tcggttgtcg gtctggttta tgctttcatc tctttcgggc
     1501 gggctgctgt ttgccgcatc gacagacggt gtgtcgtgga cgaaaggttt ggcgatggct
     1561 tccggcttcg gttggtattc cctctcgggt ttggtcatga ccgaggctta cggcgcggta
     1621 tggggcagca tcatgctgct gaacgatttg gcacgagagc tgtttgcact ggcatttatc
     1681 ccgctgctga tgaagcgttt tccggatgcg gcggtggggg ttggtggtgc gaccagtatg
     1741 gatttcacat tgcccgtgat tcagggtgcg ggcggtttgg aagtcgtgcc ggtagcggtc
     1801 agcttcggcg tggtggtcaa tatcgccgcc ccatttctga tggtggtgtt ttccgctttg
     1861 ggttgaacgc ggtaaaatcg gcatcccgat gcaaggaggc agaaaacgat gaaaccgaaa
     1921 atccaaaggc acggagagat tttaagcctt gtccgccggc atcagtttat gtcggtggac
     1981 gagcttgccg ccgcattgga cgttaccccg cagacgatac gccgcgacat ccgcgagttg
     2041 gaggagggcg gcagcctgaa acgccatcac ggcggcgcat cttcgggcgg aaacttgccg
     2101 gagggcctgc ccgccgaccg ccaaacccgg tgtcaaaacg aaaaaaacgc cattgcccgg
     2161 ctgattgcgg aacacatccc cgacggttcg tcgctgtttg tcagtatcgg cacgacgatg
     2221 gaagccgtgg catcggagct ggtcaggcgg cgcggcagcc tgcggattat taccaacaat
     2281 atccacgtcg cctccatcgt ttcggcgcgg acggattaca cggtcattat cacttccgga
     2341 gtcgtccgcc ctttggacgg cggtattacc ggcgtggcaa ccgtcgattt tatcaaccag
     2401 ttcaaagtcg attatgccgt gatgagtacg cacggcgtgg aaagcgacgg ttcgcttttg
     2461 gacgacgact acaaagaagt cagcgtgatg caggcgatga ttgccaatgc gcgcgtccgc
     2521 ttcctcggcg tggaccacag taaattccgc agcaacgcgc tggtcaggct cggcgacatt
     2581 acggcgtttg acaaagtatt taccgaccgg ctgcccgata ccgcgatgca gaagatgctg
     2641 aaagaggcgg gggtggaatg cctgattgcc gatgccgtct gaacgctatg tcaaagcgcg
     2701 caagtcgggt acaataaaca catcatcaaa ccgcttcaga cggcataagg aaccgcccca
     2761 atgccgtctg aagccatctg ttcaaagaaa actatgctca ataaagacca atttgcggac
     2821 aaccatttta tccgcacctt catcgaagaa gacctcaaaa gcggcaaaca cgaaaccatc
     2881 caaacccgtt ttccgccgga gcccaacggc tacctgcaca tcggacacgc caaatccatc
     2941 tgcctgaact tcggtttggc gtatatttac gacggcttgt gcaacctgcg ttttgacgat
     3001 accaaccccg aaaaagaaaa cgacgaatac gtcaacgcca tcaaagaaga cgttgagtgg
     3061 ctcggtttcc attgggcggg cgagccgcgt ttcgcttcca actatttcga ccagctttat
     3121 gactacgccg tcggtttggt taaagacggc aaagcgtatg tcgatgattt gacgcccgaa
     3181 gaaatgcgcg aataccgcgg tacgctgacc gaagcaggca aaaacagccc ttatcgcgac
     3241 cgcagtatcg aagaaaacct cgacctgttc acgcgcatga aaaacggcga gttccccgac
     3301 ggcagcaaaa ccctgcgcct gaaaatcgac atggcatccg gcaacatcaa tatgcgcgat
     3361 ccggtcatct accgcatccg ccgcgcccat caccacaaca ccggcgacaa atggtgcatc
     3421 tatccgatgt acgactacac gcattgtatt tccgatgcca tcgaaggcat cacgcattcc
     3481 ttgtgtacgc tcgaatttga agcccatcgt ccgctgtatg actgggtgtt ggacaacatc
     3541 cccgcgccgc acgccacacg tccgcgccaa tacgagtttt cacgcttgga gcttttgtac
     3601 accattacct ccaaacggaa attgaatcag ttggttgtgg aaaaacacgt ttccggctgg
     3661 gacgatccgc gtatgccgac catttccggt atgcgccgac gcggctacac gcccgaaggc
     3721 ctgcgtctgt ttgccaaacg cgccggtatt tccaaatctg aaaacatcgt cgatatgagc
     3781 gtgttggaag gcgcgattcg cgaagagttg gaaaattccg ccccacgcct gatggcggtg
     3841 ttgaacccgc tcaaagtgac cctgaccaac tttgaagccg gcagaaccca aagccgccgt
     3901 gccgcgttcc atccgaacca cgaggaaatg ggcgagcgcg aagtacctat ttcacaaacc
     3961 atctatattg aagccgacga ctttgccgaa aatccgccca aaggcttcaa acgcctgatt
     4021 cccggcggcg aagtacgctt gcgccacggc tatgtcatca agtgcgatga agtcgtcaaa
     4081 gacgaagcag gcaatgtggt tgaactcaaa tgcagcatcg accacgacac cttgggcaaa
     4141 aatccagaag gccgtaaagt taaaggcgtg attcattggg tttccgccga acacgcagcc
     4201 gaaatcaaag tccgcctgta cgaccgcctc tttaccgtcg agcgtcccga tgccgtgcgc
     4261 ggcgaagacg gcgaatacct gccgttcacc gatttcctca atccggaatc cgtcaaggaa
     4321 atcaccgcct acgccgaacc tgccgccaaa gatttgccgg cagaaagccg ttggcagttc
     4381 gagcgtatcg gctacttcgt aaccgaccgt aaagaccacg gcaaagacac gccggtgttt
     4441 aaccgcacgg tcacgctgaa agattcttgg cagcctaagt aaaaccccat ccttgccgtc
     4501 tgaatattgt tcggacggca tttccccttt gcccgcgaaa tgcggcacat tcggcacacc
     4561 ggaaaggaaa tatgatgaaa gtcctcttta tcgccgaccc gatggcaagt ttcaaaacct
     4621 acaaagacac cacctacgcc atgatgcgcg agatggcaaa acgcggttgg cggctgtttc
     4681 ataccttgag cggggaattg tcggttaaaa acggtctggt ggttgctgat gcgtctgctt
     4741 ttgagtttct cggcgcacaa gacgaccacg acaaaaactg gtttgccgcc gccgacaaag
     4801 ttcagacggc attggaagca tttgatgccg tgattatgcg taccgatccg ccgttcgata
     4861 tgcaatacct ctacgccacc caattactga cgctggcgga acagcagggc gcgaaggtct
     4921 ttaacagcgg acaggcgatg cgcgacttta atgaaaaact ggcgattttg aacttcagcc
     4981 gctttatcgc gcccacgctg gtaacgaccc gttccgccga tgtccgcaca tttttgaaag
     5041 aacacggcga catcatcatc aaaccgctcg acggcatggg cggtatgggc attttccgcc
     5101 tgaccgaaaa agaccccaac atcggcagca tcctcgaaac cctgatgcag cttgattccc
     5161 gcaccattat ggcgcaacgc tacattcccg aaatcgtaca cggtgacaaa cgcatcctga
     5221 ttatcggcgg cgaagtcgtc ccctatgctt tggcgcgtat cccgcaaaac ggcgaaacac
     5281 gcggcaacct tgcggcaggc gggcgcggcg tggcgcagga attgggcgga cgcgaccgcg
     5341 aaattgccga aacgctcgcc cccgaactca aacggcgcgg catcctgctg gccggtttgg
     5401 acgttatcgg cagcaacctg accgaagtca acgtaaccag cccgaccgga ttccaagaaa
     5461 tcatgaaaca aaaaggtttc gacgtggcgg caatgtttgc cgatgccgtt gccgcgtggt
     5521 cggtacgtta aaccgatgtc gtctgaaagg cttttgcttc acaaccgttt ggtttgttcg
     5581 ggcaggcagg gttttccctc agccggcagg gatgcggtta atgccgtacg gacaccccgc
     5641 cgccccgttt tcagacggta tatatagtgg attaacaaaa atcaggacaa gg
//
LOCUS       DAWGBY010000123         5647 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.123, whole genome shotgun sequence.
ACCESSION   DAWGBY010000123 DAWGBY010000000
VERSION     DAWGBY010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5647
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.123"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(128..889)
                     /locus_tag="WHG62_001772"
     CDS             complement(128..889)
                     /locus_tag="WHG62_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725843.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            989..1240
                     /locus_tag="WHG62_001773"
     CDS             989..1240
                     /locus_tag="WHG62_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725844.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            1292..2098
                     /locus_tag="WHG62_001774"
     CDS             1292..2098
                     /locus_tag="WHG62_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ1725845.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            2405..3928
                     /locus_tag="WHG62_001775"
     CDS             2405..3928
                     /locus_tag="WHG62_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ1725846.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTDLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            4026..5438
                     /gene="trkA"
                     /locus_tag="WHG62_001776"
     CDS             4026..5438
                     /gene="trkA"
                     /locus_tag="WHG62_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ1725847.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
BASE COUNT         1405 a         1699 c         1370 g         1173 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat attaatattt tgcgcctgtt
       61 ctatgatgct ttcaagtcgg gtgagaatgc aaatgccgtc tgaaacggct ttcagacggc
      121 atggcaatca gcgtttgtat tttaactcgt acttgatgtc gttgaggatt ttgcggacat
      181 cgtgttccaa cacgtcttcg actaccgcac ccgcctgctc gtgcagcatc tgctggagct
      241 gataggtaaa aaccgccatc tgcttttgca ccgccgtacg gatgatgccg ttgacggtat
      301 cggtcagatg cgggcgcagg cgtttgatca gccgttcggt cagctcctgt tcggacaggc
      361 agaacacttc gcgccggttg acggctttcg gattcaggat attgatttgg acgggcatca
      421 acgcctcttc cgcaccgcct tcgccgtttt ccgcaacccc gtctgccgcc gtacccgatt
      481 ctgccgcatc ggcgttttcc ccgccttcaa tctgtccggt ttcaaattcg gcactgtctt
      541 ttttggcatc gaacaggatt ctccgccgcg attcgatgtg tttttccgaa accgacattt
      601 gcagggaagc ctgcgcgttg agccagtttt cctgaaggac aatcatcggg tcggtttcga
      661 cttcctcgcc gcaatcggca acggcggcat tgtgttcctc ctgccatttt ttcagatacg
      721 ccttcaacac acgggctcgg ctctcatcgt ccagtttcgg cacaggcgcg tccgttccgg
      781 tttcagaggg gcgggacagc ggcgcgtaag tcggcactgc cttcatacgg cgcgtctgac
      841 gcaggttttc caaacgtttt tcccaattcg gctctttatt cgcatccatt ttcggcttcc
      901 ggttcttaat ctttgcaagc agacaaaccc gcgcccaaag cgcggtttga tataatggcg
      961 cattttaaca gattcgcgag gatacatcat gggcagcatc gaacagcgtt tggaatatct
     1021 ggaagaggcg aacgacgtgc tgcgtatgca gaaccacgtc ctgtccaccg cattcaaagc
     1081 cttaatccgc gcccttcccg ccgaaaccgc cgaaatcgcg gtcgagtcga ttcagcttgc
     1141 ttttgaggac gccttggcag aattgagcta tgaggacagc ccccataccg atttgttcca
     1201 cgacgttact tatgcgtttt tccgtgaaaa agaacgttaa ttttatgtta aactgatttt
     1261 ttaggctttt tgattaccga aaggaatttt gatgaatatg aaaaaatgga ttgccgccgc
     1321 ccttgcctgt tccgcgcttg cgctgtctgc ctgcggcggt cagggtaaag atgccgccgc
     1381 gcccgccgca aatcccgaca aagtgtaccg cgtggcttcc aacgccgagt ttgccccctt
     1441 tgaatcttta gactcgaaag gcaatgtcga aggtttcgat gtggatttga tgaacgcgat
     1501 ggcgaaggcg ggcaatttta aaatcgaatt caaacaccag ccgtgggaca gccttttccc
     1561 cgccttgaac aacggcgatg cggacgttgt gatgtcgggc gtaaccatta ccgacgaccg
     1621 caaacagtct atggacttca gcgacccgta ttttgaaatc acccaagtcg tcctcgttcc
     1681 gaaaggcaaa aaaatatctt cttccgacga tttgaaaaac atgaacaaag tcggcgtggt
     1741 aaccggctac acgggcgatt tctccgtttc caaactcttg ggcaacgaca atccgaaaat
     1801 cgcgcgcttt gaaaacgttc ccctgattat caaagaactg gaaaacggcg gcttggattc
     1861 cgtggtcagc gacagcgcag tcatcgccaa ttatgtgaaa aacaatccga ccaaagggat
     1921 ggacttcgtt accctgcccg acttcaccac cgaacactac ggcatcgcgg tacgcaaagg
     1981 cgacgaagca accgtcaaaa tgctgaacga tgcgttggaa aaagtacgcg aaagcggcga
     2041 atacgacaag atttacgcca aatattttgc aaaagaagac ggacaggccg caaaataagc
     2101 ccgcccgtcc gaacacaatg ccgtctgaag ccttttcaga cggcattgtt catcaaccgg
     2161 cctacaatga actgcctgct gatttctccc taccgcaaag caacaggcaa agattacaaa
     2221 tatcaaaatc cgagtaaaac agtattttat taaaacaaat tgataatcaa gagattagaa
     2281 ttatgtattg tctttaccgt acaaacgctg gcactatttc aacctgataa aaaacagcct
     2341 tcaaaaaggt tgcttaaaac agcagcagac acttaccgcc acaaccttga aaaggaacac
     2401 aatcatgacc gtcatcaagc aagaagactt tatccaaagt atctgcgatg ccttccaatt
     2461 catcagctac taccatccga aagactacat cgacgcgctt tataaggcgt ggcagaagga
     2521 agaaaatccc gccgccaaag acgcgatgac gcagattttg gtcaacagcc gtatgtgtgc
     2581 ggaaaacaac cgccccatct gccaagatac cggtatcgca accgtgtttt tgaaagtcgg
     2641 tatggatgtg cagtgggatg cggatatgag cgtggaagaa atggttaacg aaggcgtgcg
     2701 ccgcgcctac acttgggaag gcaatacgct gcgcgcttcc gttctcgccg accccgccgg
     2761 caaacgccaa aataccaaag acaacacgcc cgccgtcatc catatgagca tcgtgccggg
     2821 cgacaaagtc gaagtaacct gcgcggcaaa aggcggcggc tctgaaaaca aatccaaact
     2881 cgccatgctc aatccttccg acaacatcgt cgattgggta ttgaaaacca tcccgaccat
     2941 gggcgcgggc tggtgtcctc ccggcatctt gggcatcggc atcggcggca cgcccgaaaa
     3001 agccgtgttg atggcaaaag aatccttgat gagccacatc gacattcaag agttgcagga
     3061 aaaagcagcg tcaggtgcag aattgtccac caccgaagcc ctgcgcctcg aactctttga
     3121 aaaagtcaac gcgctgggca tcggcgcgca aggcttgggc ggtctgacca ccgtgttgga
     3181 cgtgaaaatc ctcgattacc cgacccacgc cgcctccaaa ccgattgcca tgattccgaa
     3241 ctgcgccgcc acccgccacg tcgaatttga attggacggc tcaggccctg tcgaactcac
     3301 gccgccgcgc gtcgaagact ggcccgattt gacttacagc cccgacaacg gcaaacgcgt
     3361 cgatgtcgac aagctgacca aagaagaagt ggcaagctgg aaaaccggcg acgtattgct
     3421 gttgaacggc aaaatcctca ccggccgcga tgccgcacac aaacgcctcg tcgatatgct
     3481 caacaaaggc gaagaattgc ccgtcgattt caccaaccgc ctgatttact acgtcggccc
     3541 cgtcgatccg gtcggcgatg aagtcgtcgg tccggcaggt ccgaccacag ccacccgcat
     3601 ggacaaattc acccgccaaa tgctcgaaca aaccgacctc ttgggcatga tcggcaaatc
     3661 cgagcgcggc gtggccacct gcgaagccat cgccgacaac aaagccgtgt acctcatggc
     3721 agtcggcggc gcggcgtatc tcgtggcaaa agccatcaaa tcttccaaag tcttggcgtt
     3781 ccccgaattg ggcatggaag ccatttacga atttgaagtc aaagacatgc ccgtaaccgt
     3841 cgccgtagac agcaaaggcg aatccatcca cgccaccgcc ccgccccaat ggcaggcgaa
     3901 aatcggcatc atccccgtca aatcttgagg cgtcatgccg tctgaacaca aaatctgctt
     3961 tcagacggca tttccgcccc tggttgcggt acaatccacc atttcatcac tcggcgaccc
     4021 acaccgtgaa aatcctcatt ttaggcaacg gacaggtagg ttctaccgtc gcacaaaacc
     4081 ttgccgccat acccaacaac gacgtaaccg ttatcgacat cgacgaaaaa gcattgcagg
     4141 aaacaggcag ccgcctcgat gtccaaaccg ttttcggcaa cggcgcatcc cccttcacat
     4201 tagaacgcgc cggcgcggaa gatgccgact tgctgctcgc gctctcccgc agcgacgaaa
     4261 ccaacatcgt cgcctgcaaa gttgccgccg acctgttcaa catccccggc cgcatcgcgc
     4321 gcgtccgttc cagcgaatac ctcgaatacc tcagccccaa gctcgaaaac aacgaaaacg
     4381 gcagcctttc catattcggc ataaccgaaa ccatcagccc cgaacagctc gttaccgaac
     4441 agcttgccgg cctgatagac tgcccgggcg cattgcaggt tttacgtttt gcagacgacc
     4501 gcgtgcggat ggtcatcata caggcgcggc gcggcggact gcttgtcgga cgcagcattg
     4561 ccgacatcgc ccaagatttg cccgacgggg ccgactgcca aatctgcgcc gtttaccgca
     4621 acaaccgcct catcgtcccc gcgccgcaaa ccgtcatcat cgaaggcgac gaaatcctat
     4681 ttgccgccgc cgccgaaaac atcggcgcgg tcatacccga attgcgcccc aaagaaacca
     4741 gcacccgccg catcatgatt gccggcggcg gcaacatcgg ctaccgtctc gccaagcagc
     4801 tcgaacacgc atacaacgtc aaaatcatcg aatgccggcc gcgccgtgcc gaatggatag
     4861 ccgaaaacct cgacaacacc ctcgtcctgc aaggttcggc aaccgacgaa accctgctcg
     4921 acaacgaata catcgacgaa atcgacgtat tctgcgccct gaccaacgac gacgaaagca
     4981 acattatgtc cgcccttttg gcgaaaaacc tcggcgcgaa gcgcgtcatc ggcatcgtca
     5041 accgctcaag ctacgtcgat ttgctcgaag gcaacaaaat cgacatcgtc gtctcccccc
     5101 acctcatcac catcggctcg atactcgccc acatccggcg cggcgacatc gttgccgtcc
     5161 accccatccg gcgcggcacg gcggaagcca tcgaagtcgt cgcacacggc gacaaaaaaa
     5221 cttccgccat catcggcagg cgcatcagcg gcatcaaatg gcccgaaggc tgccacattg
     5281 ccgccgtcgt ccgcgccgga accggcgaaa ccattatggg acaccatacc gaaaccgtca
     5341 tccaagacgg cgaccacatc atctttttcg tctcgcgccg gcgcatcctg aacgaactgg
     5401 aaaaactcat ccaagtcaaa atgggctttt tcggataaac cgccccattc cggacacatt
     5461 gccgccaagc ggtatggaag cggaataatg gtaggtgggc ttcagacggc atcgtccccc
     5521 accgttattc ccgcgcaggc gggaatccgg tctgttcggt ttcagttgtt tttgggtttc
     5581 gggtaatttc caaatcgtca ttcccgcaca ggcgggaatc caaaccattg gacagcggca
     5641 atattca
//
LOCUS       DAWGBY010000124         5554 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.124, whole genome shotgun sequence.
ACCESSION   DAWGBY010000124 DAWGBY010000000
VERSION     DAWGBY010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.124"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            194..2359
                     /locus_tag="WHG62_001777"
     CDS             194..2359
                     /locus_tag="WHG62_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ1725848.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     RDVSSEKPKAQKDQGGYGFAMRLKRRNWYPRAEESEVKLKESDWEETGLPDDPKNLPK
                     RQKSVIDEVKTDDGSNNIHSSPYLTQSNHQNGSTNGGANQPKNEVTNYKDFKYVYSGW
                     FYKHAKLEIIKENGSTKAKSGDDGYIFYHGEKPSRQLPASEKVIYKGVWHFVTDTKKG
                     QEFREIIQPSKKQGDRYSGFSGDDNEEYSNKKETTLQSGHEGYGFTSNLEVDFGNKKL
                     TGKLIRNNVNQNNTNNDKHTTQYYSLDAQITGNRFNGKAIATDKPQANETKQHPFVSD
                     SSSLSGGFFGPQGEELGFRFLSNDQKVAVVGSAKTQDKAANGNTAAASGGTDAAASNG
                     AAGTSSENSKLTTVLDAVELTLNDKKIKNLDNFSNAAQLVVDGIMIPLLPETSESGSN
                     QADKGKNGKNGGTDFTYKTTYTPKSDEKDTQAGTPTNGAQTASNTAGDTNGKTKTYEV
                     EVCCSNLNYLKYGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPT
                     DQNVVYRGSWYGHIANNTSTSWSGNASNATSGNRADFTVNFGDKKITGTLTANDRTQP
                     TFTITANIKDNGFEGTAKTAELGFDLDQSNTTGTPKAYITNAKVQGGFYGPKAEELGG
                     WFAYPGDKQTENTTVASGNGNSASSATVVFGAKRQKPVQ"
     gene            2445..5198
                     /gene="tbpA"
                     /locus_tag="WHG62_001778"
     CDS             2445..5198
                     /gene="tbpA"
                     /locus_tag="WHG62_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ1725849.1"
                     /translation="MQQQHLFRFNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGVSQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDGHQYAHFVVEEECESRNYETCKSKP
                     KKDIVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDANKKQAGSLPGNGKYVGNHKYGGLFTNGENGALVGAE
                     YGTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADG
                     SDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGS
                     NLRHQDYYYQNAKRAYSLKTPPQSGNGGSNANPNGSQGKPYWVSIGGGNVVTGQICRL
                     GNNTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHR
                     TLSWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEA
                     GIVFKGDFGNLEASWFNNAYRDLIVRGYEAQIKNGKEEAKGDPAYLNAQSARITGINI
                     LGKIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLG
                     YDQPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYY
                     TIKKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLE
                     MKF"
BASE COUNT         1642 a         1365 c         1385 g         1162 t
ORIGIN      
        1 ctttcgtggg aatgacggga tatacgtggg aatgacggga tataggtttc cgtgcggacg
       61 cgttcggatt cacgactgcg cgggaatgac gggattttgg tgtattccct aaaaaaataa
      121 aaaagtattt gcaaatttgt taaaaataaa taaaataata atccttatca ttctttaatt
      181 gaattgggtt tatatgaaca atccattggt aaatcaggct gctatggtgc tgccggtgtt
      241 tttgttgagt gcttgtttgg gcggaggcgg cagtttcgat cttgattctg tcgataccga
      301 agccccgcgt cccgcgccaa agtatcgaga tgtttcttcc gaaaagccta aagcccaaaa
      361 agaccaaggc ggatacggtt ttgcgatgag gttgaaacgg aggaattggt atccgagggc
      421 agaagaaagc gaggttaaac tgaaagagag tgattgggag gagacgggat tacctgacga
      481 tcccaaaaac ttacctaagc gacagaaatc ggttattgat gaagtaaaaa cagacgatgg
      541 cagcaataat attcattctt ccccttatct cacgcaatca aaccatcaaa acggcagcac
      601 taatggcggt gcaaaccaac caaaaaacga agtaacaaat tataaagatt tcaaatatgt
      661 ttattccggt tggttttaca aacacgctaa actcgaaatc ataaaagaaa acggctcaac
      721 taaggcaaag agcggcgacg acggttatat cttttatcac ggtgaaaaac cttcccgaca
      781 acttcctgct tctgaaaaag ttatctacaa aggtgtgtgg cattttgtaa ccgatacaaa
      841 aaagggtcaa gagtttcgtg aaattatcca gccttcaaaa aaacaaggcg acaggtatag
      901 cggattttcg ggtgatgaca acgaagaata ttccaacaaa aaggaaacga ctttacaaag
      961 cggtcatgaa ggttatggtt ttacctcgaa tttagaagtg gatttcggca ataaaaaatt
     1021 gacgggtaaa ttaatacgca ataatgtgaa ccaaaataat actaataatg acaaacacac
     1081 cacccaatac tacagccttg atgcccaaat aacaggcaac cgcttcaatg gcaaggcaat
     1141 agcgaccgac aaaccacaag cgaatgaaac caaacaacat ccctttgttt ccgactcgtc
     1201 ttctttgagc ggcggctttt tcggcccgca gggtgaggaa ttgggtttcc gctttttgag
     1261 caacgatcaa aaagttgccg ttgtcggcag cgcgaaaacc caagacaaag ccgcaaatgg
     1321 caatactgcg gcggcttcag gcggcacaga tgcggcagca tcaaacggtg cggcaggcac
     1381 gtcgtctgaa aacagtaagc tgaccacggt tttggatgcg gttgaattga cactaaacga
     1441 caagaaaatc aaaaatctcg acaacttcag caatgccgcc caactggttg tcgacggcat
     1501 tatgattccg ctcctgcccg agacttccga aagtgggagc aatcaggcag ataaaggtaa
     1561 aaacggtaaa aacggcggaa cagactttac ctacaaaaca acctacacgc cgaaaagcga
     1621 tgaaaaagac acccaagcag gtacgccgac gaatggggcg caaaccgctt caaatacggc
     1681 aggtgatacc aatggcaaaa caaaaaccta tgaagtcgaa gtctgctgtt ccaacctcaa
     1741 ttatttgaaa tatggaatgt tgacgcgcaa aaacagcaag tccgcgatgc aggcaggaga
     1801 aagcagtagt caagctgatg ctaaaacgga acaagttgaa caaagtatgt tcctccaagg
     1861 cgagcgcacc gatgaaaaag agattccaac cgaccaaaac gtcgtttatc gggggtcttg
     1921 gtacgggcat attgccaaca acacaagcac aagctggagc ggcaatgctt ccaatgcaac
     1981 gagtggcaac agggcggact ttaccgtgaa ttttggcgat aaaaaaatta ccggcacgtt
     2041 aaccgctaat gataggactc agccaacctt tactatcacg gctaatatta aggacaacgg
     2101 ctttgaaggt acggcaaaaa ctgctgaatt aggttttgat ctcgatcaaa gcaataccac
     2161 cggcacgcct aaggcatata tcacaaacgc caaggtgcag ggcggttttt acggacctaa
     2221 agccgaagag ttgggcggat ggtttgccta tccgggcgat aaacaaacgg aaaatacaac
     2281 agttgcatcc ggcaatggaa attcagcaag cagtgcaact gtcgtattcg gtgcgaaacg
     2341 ccaaaagcct gtgcaataag cacggttgcc gaacaatcaa gaataaggct tcgacggcat
     2401 cgctccttcc gatgccgtct gaaagcgaag attagggaaa cactatgcaa cagcaacatt
     2461 tgttccgatt caatatttta tgcctgtctt taatgaccgc gctgcctgct tatgcagaaa
     2521 atgtgcaagc cggacaagca caggaaaaac agttggatac catacaggta aaagccaaaa
     2581 aacagaaaac ccgccgcgat aacgaagtaa ccggtttggg caaattggtc aaaaccgccg
     2641 acaccctcag caaggaacag gtactcgata tccgcgacct gacgcgttac gaccccggca
     2701 tcgccgtggt cgaacagggt cggggcgcaa gttccggcta ttcaatacgc ggcatggata
     2761 aaaaccgcgt ttccttaacg gtggacggcg tttcgcaaat acagtcttac accgcgcagg
     2821 cggcattggg cgggacgagg acggcgggca gcagcggcgc aatcaatgaa atcgagtatg
     2881 aaaacgtcaa ggccgttgaa atcagcaaag gctcaaactc ggtcgaacaa ggcagcggcg
     2941 cattggcggg ctcggtcgca tttcaaacca aaaccgccga cgatgttatc ggggaaggca
     3001 ggcagtgggg cattcagagt aaaaccgcct attccggcaa aaaccggggg cttacccaat
     3061 ccatcgcgct ggcggggcgc atcggcggtg cggaggcttt gctgatccac acgggtcggc
     3121 gcgcggggga aatccgcgcc cacgaagatg caggacgcgg cgttcagagc tttaacaggc
     3181 tggtgccggt tgaagacggc caccaatacg ctcatttcgt ggtcgaagaa gaatgcgaaa
     3241 gcagaaatta cgaaacgtgt aaaagcaaac cgaaaaaaga tattgtcggc aaagacgaac
     3301 gtcaaacggt ttctacccga gactacacgg gtcccaaccg ctttctcgcc gatccgcttt
     3361 catacgaaag ccgatcgtgg ctgttccgcc cgggttttcg ttttgaaaac aaacggcact
     3421 acatcggcgg catactcgaa cacacgcaac aaactttcga cacgcgcgat atgacggttc
     3481 cggcattcct gaccaaggcg gtttttgatg caaataaaaa acaggcgggt tctttgcccg
     3541 gtaacggcaa atacgtgggc aaccacaaat acggcggact gtttaccaac ggcgaaaacg
     3601 gtgcgctggt gggcgcggaa tacggtacgg gcgtgtttta cgacgagacg cacaccaaaa
     3661 gccgctacgg tttggaatat gtctatacca atgccgataa agacacttgg gcggattatg
     3721 cccgcctctc ttacgaccgg cagggcatcg gtttggacaa tcattttcag cagacgcact
     3781 gttctgccga cggttcggac aaatattgcc gcccgagtgc cgacaagccg ttttcctatt
     3841 acaaatccga tcgcgtgatt tacggggaaa gccacaggct cttgcaggcg gcattcaaaa
     3901 aatccttcga taccgccaaa atccgccaca acctgagcgt gaatctcggg tttgaccgct
     3961 ttggctctaa tctccgccat caggattatt attatcaaaa tgccaaacgc gcctattcgt
     4021 tgaaaacgcc ccctcaaagc ggcaacggcg gctcaaacgc caaccccaac ggcagccaag
     4081 gcaaacccta ttgggtcagc ataggcgggg gaaatgtggt tacggggcaa atctgccgct
     4141 tgggcaacaa tacttatacg gactgcacgc cgcgcagcat caacggtaaa agctattacg
     4201 cggcagttcg ggacaatgtc cgtttgggca ggtgggcgga tgtcggcgcg ggcttgcgct
     4261 acgactaccg cagcacgcat tcggacgacg gcagcgtttc caccggcacg caccgcaccc
     4321 tgtcctggaa cgcaggcatc gtcctcaaac ctgccgactg gctggatttg acttaccgca
     4381 cttcaaccgg cttccgcctg ccctcgtttg cggaaatgta cggctggcgg gcgggtgttc
     4441 aaagcaaggc ggtcaaaatc gatccggaaa aatcgttcaa caaagaagcc ggcatcgtgt
     4501 ttaaaggcga tttcggcaac ttggaggcaa gttggttcaa caatgcctac cgcgatttga
     4561 ttgtccgggg ttatgaagcg caaattaaaa acggcaaaga agaagccaaa ggcgacccgg
     4621 cttacctcaa tgcccaaagc gcgcggatta ccggcatcaa tattttgggc aaaatcgatt
     4681 ggaacggcgt atgggataaa ttgcccgaag gttggtattc tacatttgcc tataatcgtg
     4741 tccgtgtccg cgacatcaaa aaacgcgcag accgcaccga tattcaatca catctgtttg
     4801 atgccatcca accttcgcgc tatgtcgtcg gcttgggcta tgaccaaccg gaaggcaaat
     4861 ggggtgtgaa cggtatgctg acttattcca aagccaagga aatcacagag ttgttgggca
     4921 gccgggcttt gctcaacggc aacagccgca atacaaaagc caccgcgcgc cgtacccgcc
     4981 cttggtatat tgtggatgtg tccggttatt acacgattaa aaaacacttc accctccgtg
     5041 cgggcgtgta caacctcctc aactaccgct atgttacttg ggaaaatgtg cggcaaactg
     5101 ccggcggcgc agtcaaccaa cacaaaaatg tcggcgttta caaccggtat gccgcccccg
     5161 gtcgcaacta cacatttagc ttggaaatga agttttaaac gtccaaacgc cgcaaatgcc
     5221 gtctgaaagg cttcagacgg cattttttac acaattccca ccgtttccca tcatccccga
     5281 tacaccgtaa tcctgaaatc cgtcattccc gagcaggcgg gaatccagtc cgttcggttt
     5341 aggttttttt gaggtttcgg gtaactctaa accgtcattc ctacgaaaac agaaaatcaa
     5401 aaacagaaac ctcaaatccc gtcattcccg agcaggcggg aatctagggc gtaaaatcta
     5461 aagaaaccgt tttatccgat aagtttccgc accgacagac tagattcccg cctgcgcggg
     5521 aatgacgtta tatttttcgc atttgataaa aaag
//
LOCUS       DAWGBY010000125         5544 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.125, whole genome shotgun sequence.
ACCESSION   DAWGBY010000125 DAWGBY010000000
VERSION     DAWGBY010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5544
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.125"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            207..1118
                     /locus_tag="WHG62_001779"
     CDS             207..1118
                     /locus_tag="WHG62_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725850.1"
                     /translation="MFDLEVALRRVLSAAPTVQDTQIEQYNQLTQIMHRTLDPKDVKG
                     NSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPPSGYSFLRKEAFLYIVGHHV
                     IFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFKAVGNCDKLSLIQQHGVKSI
                     LLDVSAYQLSRNRLYQDSRSTIAKALGKVGSVFTSELSDEELEAQSEIHINLEVLLNG
                     NSRASIEAQSLMQEQAEEIIDDETVNQGFSITTQQGEVIQPSDVKLSKSVRIGRYDEA
                     NSLLPDSAFTAISEYFLELQSRNLTEQ"
     gene            1115..1597
                     /locus_tag="WHG62_001780"
     CDS             1115..1597
                     /locus_tag="WHG62_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725851.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNLIKSRKEEFKKLMEKKKPKI
                     "
     gene            1687..2190
                     /locus_tag="WHG62_001781"
     CDS             1687..2190
                     /locus_tag="WHG62_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ1725852.1"
                     /translation="MSDKFNQFINRVLSHEGGYANHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAISIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     AAADNAD"
     gene            2299..2631
                     /locus_tag="WHG62_001782"
     CDS             2299..2631
                     /locus_tag="WHG62_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725853.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAAVPQLAEVKKS
                     ANQEGGRQ"
     gene            2628..3038
                     /locus_tag="WHG62_001783"
     CDS             2628..3038
                     /locus_tag="WHG62_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ1725854.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            3043..3792
                     /locus_tag="WHG62_001784"
     CDS             3043..3792
                     /locus_tag="WHG62_001784"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ1725855.1"
                     /translation="MPSVELLLEIVGLPRGTFYYQLAVQSAEDKYADLKRHIHDIYRR
                     HKGRYGYRRIAAAIRHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNI
                     LRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQIRPTFDLAGEI
                     LKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQIVRQGEATPYWF
                     KFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
     gene            complement(4109..4471)
                     /gene="ssrA"
                     /locus_tag="WHG62_001785"
     tmRNA           complement(4109..4471)
                     /gene="ssrA"
                     /locus_tag="WHG62_001785"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(4534..5139)
                     /locus_tag="WHG62_001786"
     CDS             complement(4534..5139)
                     /locus_tag="WHG62_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ1725856.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
BASE COUNT         1511 a         1196 c         1341 g         1496 t
ORIGIN      
        1 aattgaagcg gccgtgcatt ttaaaacgca ttaaaaacta ccccgacata caggtcatcg
       61 ggcaggtggt tcaggtgttg aaagatttga attgatgccg tctgaattta ttttttcgac
      121 acagatatta aaagagaaag gactgtacaa atggcaaaaa aactactaaa actattcatt
      181 atttacgtgc gcagcaaaac catagcttgt tcgatttaga ggtagcatta agaagggttt
      241 tgtcagctgc tcctactgtt caagatacac aaattgaaca atacaatcag cttacccaaa
      301 tcatgcatag aactttggat cctaaagatg taaaaggcaa ttcaattggt ggattactga
      361 tacacattgg cagcggtaca aaagatgaac atatccgcac tatgagcaat agacctgtac
      421 agcaagatga tcatggtgga acacaagctc ctccaagtgg atattccttt ttgcgtaaag
      481 aggctttttt gtatattgtt ggacaccatg taattttttg cggacatggt tttttgtcag
      541 catcaacggt tgcttcttat ttaagtttac ttagcaataa attgagagag aacaatccgg
      601 atattgttca atttaatatt gaattcaaag cagtaggtaa ttgcgacaag ttgtcattga
      661 tacaacaaca tggggtaaaa agtattcttt tagatgtttc ggcatatcaa ttatccagaa
      721 acagactgta tcaagatagc cgttcaacca ttgctaaagc attagggaaa gttggtagtg
      781 tatttacaag cgaattgagt gatgaggaat tggaagcaca atccgaaatt catatcaatt
      841 tagaagtctt gctaaacggt aattcgagag ccagtattga agcgcaatcg ctgatgcagg
      901 agcaggcaga ggaaattatt gatgatgaaa cggttaatca aggattttcc attaccacgc
      961 aacaaggtga agtgattcag ccctctgatg taaaactgtc taaatctgtt agaataggac
     1021 gatacgatga agccaactcg ttactccctg actcggcatt tacagcaatc agtgaatatt
     1081 tcctagaact ccaaagcaga aacttaactg aacaatgaaa aaatatctgc ccttactacg
     1141 ttttttgttg attgcttgta tatcagcatt tttagcatgg aaagggcaac cttttgttca
     1201 tgggaacgag aaggccgttg atttaattat taacgtattt gcaatcttag ccggtttttt
     1261 aattgccatt atgacattgt ttagtgatat gaggtttgat gaagatgcaa attggcgaca
     1321 aattcaaatt cgtgaaggcg tacaagaaca acggtatata aaacattcct tactttttta
     1381 cacatatctt gccgtattag tttgtgtttt tattgtcatc ttgttggctc ataaagaaga
     1441 atacaaaaat ggaccagcca ttttttggct tgaacggagc tatttatttt tagcctgtat
     1501 ttccattttt tattctgtat tcttacctgg gaatttaatt aaaagccgaa aagaagagtt
     1561 taaaaaatta atggaaaaga agaaacccaa aatctagaac gagttttaac cccctttaaa
     1621 atcccattca gacgaccttt tctaaaatcc ctgtattgat ttttaattca atacagggat
     1681 ttttccatgt cagacaagtt caaccaattc atcaaccgcg tcctctctca cgagggtggt
     1741 tacgccaacc atcccaaaga ccccggcggc gaaaccaatt ggggcatcac taagcgcacc
     1801 gcacaggcaa acggctacaa cggctccatg cgtgccatga cgcgtgaaca ggcaatcagc
     1861 atttaccgta aagcgttttg ggagcgttac cgcgccgacc aaatgcccga agcggtcgct
     1921 tttcaatttt ttgatgcctg cgtcaaccac ggttacggca atgccgcccg tatgctccaa
     1981 cgcgccgcag gcgtgccgga cgatggaatc atcggcgaaa tcagcctcaa agccatcaat
     2041 tcccttcccg aaaacgacct tttattgcgg ttcaacgccg agcgtctggt cttttatacc
     2101 aagctgggta cgttcacctc tttcggcaag ggctgggtac gccgtgtggc gcaaaacctg
     2161 attcacgccg ccgcagacaa tgccgattga ggagcaaacc atgtcaaaaa agtccattct
     2221 cgccctgatg gccgcagcca tgcagcccga tttcagccac agcgacctag gcattcgcta
     2281 cgccatgccg actcagggat gttggacgca agcccaccgc aagagcgggg tagccgccgc
     2341 gaaacgcgca gccaaaaaaa agcgtcacaa ataaccgcct ttttccgatg gctgggcggc
     2401 ttggtctcta atccggccac agggaaaatc agccatacca aactttgggc aaacgtcgcc
     2461 gcagccgcca tgacttggaa gttcgtgcag gcggcggacg cgcccgaatg gctttggtgg
     2521 gcatacggcg cgatggtcgg cgggtatgca ttaatcaaac gcggcatcgc cgccgtaccg
     2581 cagttggcgg aagtcaaaaa atccgcaaat caggaagggg ggcggcaatg attgaatttg
     2641 tccgagccaa aaaacggctg ctttgggcat ttgtgctttt gcttgtgtgg acgtgcggtt
     2701 accgatacgc cgccgacaag gccgaagcgg aacaaaccgc cctgattgcc acctatcggc
     2761 attcttctat ggttgcggcg gaacaatatg ccttgcagct taaaaaagcg caggacgaaa
     2821 ggcagcggtg gtacgacttt tcccaaaaac aaggaagaaa gcccgtgaaa aaacagtatc
     2881 cgccgcaaac gaaaaaagcc ggctatctga aaaccaagga agaactgctt gcggaattgg
     2941 cttgccttac agcggaaatg gctgccctaa aaaagcccga tgccttaatc catgggaaag
     3001 aagtgcggca gaaagaacgc aactcgtcgc agggttaagg caatgccatc cgttgaactg
     3061 ctgttggaga ttgtcggact gccacgcggc accttctatt accaattggc cgtccaatcg
     3121 gcagaagaca aatatgccga tttgaaacgg catatccatg atatttatcg acgacataag
     3181 ggaagatacg gctaccggag gattgcggca gccatccgtc acgcaggaac accggtcaat
     3241 cacaagaaag tcagccgtct gatggcgaag acggggctga aggcagtgat acggcggcgc
     3301 aaataccgct cgttcaaagg agaagtcggc aaaattgcgc cgaatatcct gcgacgctgt
     3361 ttccatgcag aaaagccgaa tgagaaatgg gtaacggacg ttaccgagtt caatgtaggc
     3421 ggagaaaaga tatacctttc tccgattatg gatttgttta acggggaaat cgtcagttac
     3481 cgtattcaaa tccgcccgac tttcgatttg gccggcgaga tactgaaagg tgcgccggag
     3541 aaaccgggat cgtctgaaaa gccgatactg cattcggatc aaggttggca atatcagatg
     3601 tttttttata gtggattaaa tttaaatcag gacaaggcga tgaagccgca gacagtacaa
     3661 atagtacggc aaggcgaggc aacgccgtac tggtttaaat ttaatccact atacaacaac
     3721 gatagaatca agttgaaatt aaaagggctg agccttgttc agtacagaat tcagtccctg
     3781 aaagccgctt gattaaactg tccgactttt tggggtcagt tcggcttcgg cattttttta
     3841 tccgtttggg ggtaacttgt ttggaaagct gcaagcttat aaataaagga ttacatttaa
     3901 gttttgggta acctttttaa aaaaatgcgt gatgactttt gcatttttaa ggcgtttttt
     3961 ggggtaattc gtgaaaagtt accccaaaag ttaccccata aatggcgaaa actcaagcat
     4021 acgccagcat cctgcaacac aaaaaagcct tgaaactgtt gaagttcaag gcttttttgt
     4081 gttgcaggat gctgctgaaa atagggtatg gtggaggcgg ggggaatcga acccccgtcc
     4141 gaaagtcctc tacaaagcgt tctacatact tagttgtgtc tatttgaaaa tcttatttcc
     4201 atcatgccga ccaacaggcc ttttggaaac cagttacctt aagtcttatt tcctgccaag
     4261 taacccggta ggaaaccagt caatgtaaga tgacgttgcg gtggctttcg ccacacagcc
     4321 cattgaccga ctgctgcaac ggctagcctt aagcggctaa agcgtaagtt tcgtcgtttg
     4381 cgactatttg aattcagtgt tttacgggaa tctgagaccc cggtatgccc gcatctgctt
     4441 cgcaaccctc gtcgaaacca aggtcgcccc cagaaatggt ttgcaaatta tacggatatt
     4501 gtgcggtgct gccaagtctg tcggagaaat ttgtcagtct tgctgcctta atttgcgttt
     4561 gagcaggatg cggacgcagc cgtcgttgcc ttcccggggt tcggcgtagg cgagtacgtc
     4621 ggggtgttgc atcagccagt ttcgggtcat atttttcaga acgggtttgt agcctttgga
     4681 acctaatccg ctgccgtgga tgatttcgcc gcatacgccg cgtttttggg tgaatgcgat
     4741 gaattcgttg aggacttttt gggcttcttc ctgtgtgtag ccgtgcaggt cgacatcggt
     4801 aacgacggga tagtatccgt ttttcaggcg ttggatgtcg ttttttccct gtccgttttt
     4861 gctgaagctg gcgggcgggt cgttgtatgt gctgccgatg tagaagtagt tttcttcgtc
     4921 ggcgcggttg tctttgggac ggactttgat gggggttttg tcgggcggcg cataatattg
     4981 ctgccggttt tttaatgggg agacttgtcc gactgcttgt gaaaaatcga aatcctgttc
     5041 ttgtttttgc ttgttttttt cggctgcctg tttttctgcc gcttcttttt gggcttgttt
     5101 gcccagttgt ttgaggatgt tttggaagtc ggtattcata ttttttcctg ttatttgtcc
     5161 gatggctgtt tcgggcgggg ttttaatttg ccggaatgtt taccaatcgg gggaggatga
     5221 ttttgttgcc tgcgtatgtt ttttgaaagt gtgattgtat atcaaaaaga aatgcggcaa
     5281 ccgtcggcag tgttgattgc cggaaatgcg gaccggtcga accgatatgc ccgaacgcct
     5341 gataaagttt taaaaacctg ccttgcgaag caggctgacg tgttttgcca atcttgaatt
     5401 gccggaaacg cgaaacacgg aaatctgatg ttttataaat gttccgatac gaactgcaaa
     5461 atattggttg agacctttgc aaaattcctt tccctcccga cagccgaaac cccaacacag
     5521 gttttcgtct attttcgtac caaa
//
LOCUS       DAWGBY010000126         5537 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.126, whole genome shotgun sequence.
ACCESSION   DAWGBY010000126 DAWGBY010000000
VERSION     DAWGBY010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5537
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.126"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(150..1661)
                     /gene="lysS"
                     /locus_tag="WHG62_001787"
     CDS             complement(150..1661)
                     /gene="lysS"
                     /locus_tag="WHG62_001787"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ1725857.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(1816..3069)
                     /locus_tag="WHG62_001788"
     CDS             complement(1816..3069)
                     /locus_tag="WHG62_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ1725858.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQSDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3527..5323
                     /locus_tag="WHG62_001789"
     CDS             3527..5323
                     /locus_tag="WHG62_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ1725859.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVLTTDEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLTAKNIRIEHPDDLLDQVWTSRPAIPAETVFVH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSYLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLIDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
BASE COUNT         1320 a         1615 c         1409 g         1193 t
ORIGIN      
        1 cccgttcgtg gcgaaatccg aacaacgcct gactgccttg tccgaatggg tcggtcagtt
       61 agaaagcgaa taaatccgta ccgccataca aaatgccgtc tgaatccaat cgggttcaga
      121 cggcattgcc atttcaactg tttttatgac tactcggggc gcatctgcgg aaacagaatc
      181 acatcgcgga tggtttgcga atcggtcagc aacatcacca agcggtcgat accgatgccg
      241 caaccgccgg tcggcggcaa accaaattcc atcgcgcgga tgtagtcggc atcgtaatgc
      301 atggcttcgt cgtcgcccgc gtctttttgt gcaacttgcg atttgaagcg ttcggcttgg
      361 tcttcagggt cattcaattc tgaatagccg tttgccagtt cgcggccgac aacgaacaat
      421 tcgaaacgtt cggtcagacc ttgtttggta tccgaagcgc gcgccaacgg ggaaacttcg
      481 accgggtaat cgatgatgaa agtcgggttc cacagcttgc cctcggcgca accttcaaac
      541 agcgcgagtt gcaggctgcc gatgcccggg gacggcggca ggctttcacc gtgtttgacg
      601 atttcttttt tcagccattc cgcatcgttc aactgctcgt cggtgtagtg cggattgtat
      661 tttttgatgg cttcgaggat ggtcagacgc tcgaacgggc tttccaaatc gacttctttg
      721 ccattgtaag tgatgtttgc cgtaccgttt actgtgcgcg atgcgttgcg gatgatgtct
      781 tccgccatct gcatcatacg ttcgtagtcg gagaaggctt cgtaaaattc aatcatcgta
      841 aattcggggt tgtggcgcac ggacatgcct tcgttgcgga agctgcggtt gatttcaaac
      901 acgcgttcca agccgccgac aaccaggcgt ttcaaataca gctcaggcgc gatacgcagg
      961 taaagcggaa tatctaaggc attgtgatga gtaacgaagg gttttgccgt cgcgccgccg
     1021 ggaatcgggt gcatcatcgg ggtttcgact tcgagataat gctcgcccac cataaaatta
     1081 cgcacggatt ggatgatttg gctgcgtttg ataaaggtat tgcgcgattc ttcgttggca
     1141 atcaaatcga catagcgttg gcggtatttg gtttcctgat cgctcaagcc tttgtgtttg
     1201 tccggcagcg gacgcaagga tttggacaac aggcggatgt cggacacgcg tacggtcagt
     1261 tcgccgtggt tggttttgaa caaagtgcct tccgcgccga cgatgtcgcc caaatcccaa
     1321 tggttgaagt cgtccaaaac ttcttggctc acgcctttgt tgttcagata aagctggatt
     1381 tgcccggaca cgtcttgaat ggtggcaaag ctcgccttgc ccatttgacg cttcagcatc
     1441 atgcggccgg ccactttgac gggaatgcct tgcggatcga gttcttcttt gccgatttcg
     1501 ccgtattggg cgtgcaaatc ggcggcgaag ctgtcgcgtt tgaagtcgtt gggataggcg
     1561 ttgcgctgtt ggcggatgtt gtgcagtttt tcgcggcgca gggcgatgat ttggttttcg
     1621 tccaactgcg gctcggtttg cggatggttt tgttcgctca tagggttttc cgaaaaaata
     1681 aatcaggcgc aatctgtttc agacgacctg accgaatcac aaaatttgcg catattttac
     1741 gcgatgtcgg catttttttc cataaacgcg acaatgccgt ctgaaagcgg tttgcggttt
     1801 cagacggcat cgttatcatt tgaacattcc cgccaaattc aataagaaca aaacggtaaa
     1861 accggtcaga taaatcaagc ctgccaatgc aagggcattc atacctgatg tgagtttgtg
     1921 tttttcatca cctttgacca aacggtaatt cagccaagcg aacacggggg cggacacaaa
     1981 agcggcaatc atcgcaaatt tgagcagatt cgccattacg ccgtcaaacc aaaaaatcac
     2041 cgccaaaccg ctgcccgcca cccaaatatt ccaggcaaag aattcggcgt tgcccgtttt
     2101 gtcttttccg cgcagcaggc gcacgggttc ggcaatggca cgggcatagc cgtccacgac
     2161 ggtaatcgtc gtgccgtaca tacaggcaaa cgcgataaac gccaccagcg ggcgcgacca
     2221 gccgccgatg gtaacggcgt acatattgat caattgcccg atatatttgc cgcccgccat
     2281 ctgtactgct tcgccgttgc cgtattgcac aaacgcaccc agtgcaagga aaaccaaagc
     2341 caaaaccgca ctggcgatat aaccgacgtt gaaatcaaaa atcccgtcgc ggtattcgga
     2401 aggattgatg cgttgttttt cggttaccca caaagaattg atggcggaaa tttcaatcgg
     2461 cgcgggcatc cagcccatca gcgcgatcag gaagcccaaa ccggcaagcg tccacggtgt
     2521 cggctcgata aaatcggact gcatctgcat accgcgcgac atagcgatgc cggcggcggc
     2581 aagcgtggcg atactcaaag taacgatgat gattttggaa acgcgatcca aagcgcggta
     2641 acgtccgctc accaaaataa tcaggcagga tgccataatc aaggcggcaa ccgtgccggc
     2701 atcaaacatc agcgagggaa tcgccatttt gacgatggcg gcggttacaa tggcgaccgc
     2761 gcccgcgtta atcgtggcgg agaggatgca caaaatcagg aatacccaca aataaacgcg
     2821 gcttttctcg gcataacctt caatcaggct cttgcccgtg tccagcgtgt aatgcgcgct
     2881 gaagcggaaa aacgggtatt tgaagaggtt ggtcaggatg atgatgagcg cgatctgcca
     2941 gccgtaaagc gcgcccgcct gcgtcgaggc aatcaggtgc gaaccgccga ccgccgccga
     3001 agccatcata atccccggtc ccaatgcgtt gattttactt ttccaagtcg aaatatgttg
     3061 ttcggacata aagtcttccg tatttttaac cgtgtttcaa cacacagagc cgcatattcg
     3121 gacacagccc tatctattgc tccaatttgg gcgggattgc ccccaaacaa acccaaatcc
     3181 taccgtcttc aaaaacagga taccgcccgg tagggaaatt ttgatgaaag cgcgtattgt
     3241 aacgtaatcc aaatacctgc caacacacac tattagaact tcatgctcaa acttgactat
     3301 attttccgta ttacttccaa aaaaatgcat aaaacgatat cttatgccta aaattttaca
     3361 acaaacaacc ttacatcgct tttttcgcgc aaacacgcac catccgatca gcccgtccgt
     3421 tttgcagcag gctggcgatt tgataagatg gttatgtttt tcagacggca tttcagattt
     3481 ccgtccatgc cgtctgaagc cgcaaaaccc gattggagga actgttatga ataccgtatc
     3541 gaattacctg tccgcattgc gcgaagccat gaaggcgcaa ggcttggatg cactcgtcat
     3601 cccttccgcc gacccccacc tgtccgaata cctgcccgag cattggcagg cgcgccgcga
     3661 attatcgggc tttaccggct cggtcggcac gtttgtcctg accaccgatg aagcgggcgt
     3721 atgggtggac agccgctatt gggaacaagc cgccaagcag cttgcgggca gcggcatcga
     3781 actgcaaaaa agcgggcaag tgccgccgta taacgaatgg ctcgcggcaa acctgcccga
     3841 aaacgccgcc gtcggcatcc cttccgatat ggtctcgctc accggcaaac gcactttggc
     3901 gcaatccctg accgccaaaa acatccgcat cgaacacccg gacgatctgc ttgaccaagt
     3961 gtggacaagc cgtcccgcta tccccgccga aaccgtgttc gtccacgacc ccgcctacgt
     4021 ctccgaaacc gccgccgaaa aactcgcccg cgtgcgcgcc gtgatggcgg aaaaaggcgc
     4081 ggattaccac ttggtttcct cgctcgacga catcgcctgg ctgaccaacc tgcgcggcag
     4141 cgacgtgcct ttcaatcccg ttttcgtgtc ctatctattg attggcaaag acaacgccgt
     4201 cctgtttacc gaccgatgcc gtctgaatgc cgaagccgcc gccgcgctgc aaaccgcagg
     4261 catcacggtc gagccttacg cccaagttgc cgacaaactc gcgcaaatcg gcggcgcgtt
     4321 gcttatcgaa ccgaacaaaa ccgccgtcag cacgcttgtg cgcctgcccg aaagcgtgcg
     4381 ccttatcgag ggaatcaacc cgtccacgct gttcaaatcc tgcaaatccg aagccgacat
     4441 cgcccgcatc cgcgaagcga tggaacacga cggcgcggcg ttgtgcggtt tcttcgccga
     4501 gtttgaagac atcatcggca acggcggcag cctgaccgaa atcgacgtgg acaccatgct
     4561 ttatcgccac cgcagcgtgc gcccaggctt catttcattg agtttcgaca ccatcgcagg
     4621 cttcaacgcc aacggcgcac tgccgcatta cagcgcaacg cccgaaagcc acagcaccat
     4681 cagcggcaac gggcttttgc tcatcgactc cggcgcgcaa tacaaaggcg gcacgaccga
     4741 catcacccgc gtcgtccctg tcggcacacc caccgccgaa caaaaacgcg acaacaccct
     4801 cgttctcaaa gcccatatcg cgcttgccga agccgtgttc cccgaaaaca tcccctcgcc
     4861 gctgattgat gcgatttgcc gcaaacccct gtggcaggcg caatgcgact acggccacgg
     4921 caccggacac ggcgtaggct atttcctcaa cgtccacgaa ggcccgcagc gcatcgcctt
     4981 cgccgccccc gccacgcccg aaaccgccat gaaaaaaggc atggttacct ccatcgaacc
     5041 cggactctac cgcccgggaa aatggggcat ccgcattgaa aaccttgccg ccaaccaagc
     5101 cgtcgccgcc cctcaagaaa ccgaattcgg cagcttcctc tgttttgaaa ccctgaccct
     5161 ctgccccatc gacacccgcc tgatagacac cgccctcatg accgacggcg aaatcgactg
     5221 ggtcaaccgc taccacgccg aagtccgccg ccgcctcgag ccgctgaccg aaggcgcggc
     5281 aaaagcgtgg ctgatcaaac gcaccgaacc gctggcgcgt taaacagcac ggcgcaaaaa
     5341 atgccgtctg aaagcccttc agacggcatt ggtttcccaa aacatcccgc accgttttca
     5401 tcttgccgca agcaaatata gtggattaac aaaaatcagg acaaggcgac gaagccgcag
     5461 acagtacgaa tagtacggaa ccgattcact cggtgcttca gcacctgaga gaatcgttct
     5521 ctttgagcta aggcgcg
//
LOCUS       DAWGBY010000127         5438 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.127, whole genome shotgun sequence.
ACCESSION   DAWGBY010000127 DAWGBY010000000
VERSION     DAWGBY010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.127"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(78..278)
                     /locus_tag="WHG62_001790"
     CDS             complement(78..278)
                     /locus_tag="WHG62_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725860.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRALREVAEISAWVLLG
                     AAAAMLFWYLFMLYFKHIPDSY"
     gene            428..1567
                     /locus_tag="WHG62_001791"
     CDS             428..1567
                     /locus_tag="WHG62_001791"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ1725861.1"
                     /translation="MSQNASVGIVMPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPLVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            1564..2145
                     /gene="metW"
                     /locus_tag="WHG62_001792"
     CDS             1564..2145
                     /gene="metW"
                     /locus_tag="WHG62_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ1725862.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            2262..3107
                     /locus_tag="WHG62_001793"
     CDS             2262..3107
                     /locus_tag="WHG62_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ1725863.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(3157..3717)
                     /gene="efp"
                     /locus_tag="WHG62_001794"
     CDS             complement(3157..3717)
                     /gene="efp"
                     /locus_tag="WHG62_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ1725864.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(3760..4908)
                     /gene="earP"
                     /locus_tag="WHG62_001795"
     CDS             complement(3760..4908)
                     /gene="earP"
                     /locus_tag="WHG62_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ1725865.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDVVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYCEA
                     VRFDSGALRKRLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPLTLLLAGAQIIDS
                     LKQNGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETASAHRCLSDDLNGGGALSAT
                     QRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(4927..5205)
                     /locus_tag="WHG62_001796"
     CDS             complement(4927..5205)
                     /locus_tag="WHG62_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725866.1"
                     /translation="MSRNLLVRWLVVCLIPLATLAVFVANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
BASE COUNT         1363 a         1411 c         1436 g         1228 t
ORIGIN      
        1 cacctcctac cgcaagccct tttcatcaaa tatgccgtct gaaacagaaa aatgcgtttc
       61 agacggcatt ttttccgtca atacgaatcc ggaatgtgtt tgaaatacag cataaacaga
      121 taccaaaaca gcatcgcggc ggctgcaccg agcagtaccc atgcgctgat ttcggcgact
      181 tcgcgcaggg cgcgtttttg cctgcggctg aaaaggcggt tgataatcaa cgcggcaagt
      241 gcgaaaaaga aaaaaatacg gaaaagtctg cctatcatgt cgggaagcgg tggaggtcgt
      301 ctgaaaaagt atgattcgtg tgcggcggat gagggtcaaa cgcgtccggc tgcttgtccg
      361 accgtgtcaa aaagtcatgc cgtttgcgat ataataacgc ttttcgccgc atttgttgga
      421 acaggatatg agtcaaaatg cctcggtggg cattgtaatg ccccaaaaaa ttccgtttga
      481 gatgccgctg gttttggaaa acggtaaaac tttgccgcgt ttcgatctga tgattgaaac
      541 ctacggcgag ctgaatgctg aaaaaaacaa tgcggtttta atctgccacg cgctgtcggg
      601 caaccatcat gttgcgggca ggcattcggc ggaagataaa tatacgggct ggtgggacaa
      661 tatggtcgga cctggcaaac cgattgatac ggaacgtttt ttcgtggtcg gtttgaataa
      721 tctgggcggc tgcgacggca gcagcgggcc tttgtcgatt aatcctgaaa cgggcaggga
      781 atacggcgcg gattttccgc tggttacggt gaaggactgg gtaaaatccc aagccgcgct
      841 tgccgattat ctcggcatcg ggcaatgggc ggcggttgtc ggcggcagct tgggcggcat
      901 gcaggctttg cagtgggcga tttcctatcc cgaacgcgtg cgccacgcct tggtgattgc
      961 gtccgcgccg aaactgtcca cgcaaaatat cgcgttcaac gatgtggcgc gtcaggcgat
     1021 tttgaccgat cccgatttca acgaaggaca ttaccgcagc cgcaacaccg ttcccgctcg
     1081 gggcttgcgg attgcccgca tgatggggca cattacctat cttgccgaag acggtttggg
     1141 caaaaaattc ggacgcgatt tgcgttccaa cggctatcaa tacggctatg gcgttgaatt
     1201 tgaagtagaa tcctatctgc gctatcaagg cgacaaattc gtcgggcggt ttgatgccaa
     1261 cacctatttg ctgatgacca aggctttgga ctatttcgat ccggcggcgg atttcggcaa
     1321 cagcctgacc cgcgccgtgc aggatgttca ggcaaaattc tttgtcgcca gcttcagcac
     1381 cgactggcgt ttcgcgcccg aacgttcgca cgaactggtc aaggccctga ttgccgccca
     1441 aaaatccgtg cagtatatcg aagtcaaatc cgcacacggg cacgatgcct ttttaatgga
     1501 agacgaagcc tatatgcgtg cggtcgccgc ctatatgaac aacgtttata aggaatgtca
     1561 gcaatgaacc tgcgcgatga tttgcaactg atttacgacc ggatacccga aggcagccgc
     1621 gtcttggact tgggctgcgg cgacggcgaa ctgcttgccg ccttggtcga acacaaaaaa
     1681 tgcagcggct acggcatcga aatcgacacc gacagcgtga ttgccgcgat gtcgcgcggc
     1741 gtgaatgtta tccaagccga tttggaagaa ggtttaaccg cattcaacga tcaaagtttt
     1801 gatgtgattg tgttgagcca gaccatccaa gcgatgcaga ataccgaaaa aatcctgcgc
     1861 tgcctgatgc gcgtggcaaa acaggcaatc gtcagcttcc cgaatttcgg ctactggcgc
     1921 aaccgcgtcc aaatcgcact cggcggacat atgccggttt ccgaacgtat gccctaccat
     1981 tggtatgata cgccgaacat ccattggtgt acgctcaaag actttgattt gttgtgcgcc
     2041 aaaaacaaca tacgcgtcct cgagcgcgcc gtgatgacgg gcaacagaca ggtcaaacat
     2101 ttccccaacc ttttgggcag ccttgcgttt taccgcgtcg ggtaagacag attgagaacc
     2161 ttgtcggcaa taacaggttc ttcggttcta ttaacaacag gccgtctgaa aaatgaaatg
     2221 gcaggttttc agacggcctc tttaatattg gaaacaatag aatgaaaaac aaaacctcat
     2281 cacttctctt atggcttgcc gcaatgatgc tgaccgcgtg ttccccgagc aaagaagata
     2341 aaacgaaaga aaacggcgca tccgccgcct cgtccacggc atccgccgct tcgtcttccg
     2401 cgccccaaac cgatttgcaa ccggccgcat ccgcccctga taacgtcaag caggcagaaa
     2461 gcgcgccgcc gtcaaattgc accgacctgc accccgccac cggcattgac gatctcatgc
     2521 agcaaatcgc cgaacacatc gactcggact gtctgtttgc cctttcccat cacgaactgg
     2581 aaacccgttt cggcttaccc ggcggcggct atgacaacat acagcggctg ctgtttcccg
     2641 acatccgccc tgaagatccc gactaccatc agaaaatcat actggcaatt gaagacttgc
     2701 gttacggaaa gcgcacgatc agccggcagg cacaagatgc cttgatggaa caggaacgcc
     2761 gcctccgaga agcgacgctg ttgctgatac agggcagtca agaaacccgc ggacaaggcg
     2821 aggagccgaa acgcacgcgt tattttgaag tttcggcaac ccctgcctat tcgagccggc
     2881 acaacaacgg acttggcggc aatttccaat acatcggcca attgcccggc tatctgaaaa
     2941 tacacggaga aatgcttgaa aaccaatcac tcttccggct gtccaaccgt gaacgcaatc
     3001 ccgacaaacc gtttttagac atccattttg acgaaaatgg caaaatcacg cgtattgtcg
     3061 tttacgaaaa aaacatctac ttcaatccaa acttggggcg aagataaaaa aatgccgtct
     3121 gaaacgtttt cagacggcat ttttcaatgc aacaaatcaa gcgcgtttgc ggaattcgcc
     3181 ggtgcgggta tcgatttcga ttttgtcgcc gttttcgatg taagacatca cttggatttc
     3241 ggtgcccccg accaggcgcg cggttttcat cactttgcct gaagtatcgc ctttgacggc
     3301 aggctcggta tactcgactt cgcgtacgat gatggtgggc agttctacgg agatggggtt
     3361 gccttcgtag aaggtaactt cgcattggtc ttccataccg tcaacgatga atttcaacgc
     3421 gtcgccgatg ttgtcggctt cgatttcgta ttggttgaat tcttcgtcca taaagacgta
     3481 catcggatcg gcaaagtagc tgtacgtaca gtttttgcgg gacaggatga ccacgtcgaa
     3541 tttgtcgtcg gctttgtaaa tggtttcgga agccgcgccg gtcagcaggt ttttcagttt
     3601 catgctgact ttggcggaag agcggccgcc tttgatgtat tcggtttttt gaacgaccat
     3661 aggatcgttg ccgaccataa atacattgcc ggcgcgcagt tcttgtgctg ttttcattgt
     3721 gattttccaa tcaaatcggt tgtcgtaaaa cgcactattc tagcgtattt tttgatgctt
     3781 tgaaacaaag gcggcgagtt tttcggatgc ggaaggctgc ccgaaaagat aacggctcca
     3841 atcctccgcg ccttgccgcc agccgttttg atgttgttgc aggatttgcc aacattcgag
     3901 gcgttgcgtg gcggataaag cccctccgcc gtttaggtcg tctgaaaggc agcggtgtgc
     3961 cgatgcggtt tcgggcgtgt agaaaccgtg tgccttatcc caaaaggcgt ggagtttgtc
     4021 gagatggaca ttctcgtctt gcggatagat gtgccaaaag aagggttttc cggcaagctg
     4081 ggcgcgcacg aaactgtctt cgccgcggat gacggcgcag tcggcaaggt gcagcagttt
     4141 gtcgaagtcc tgttgcggca cgaaagggat tttgacgagg cggacggatg ccgtctgaaa
     4201 aacatcgccg tcgttttgca gggcatcttg cggaataacg ccgttttgtt tgaggctgtc
     4261 gataatttgc gcccccgcca gcaacagtgt caacggactg cctgcctgtc gccacatttc
     4321 cagccacttt gcccaaacat cgctccgata gccgaaaagc agccattcgg gggcgttttt
     4381 ttcgggaagc atcagcctct tgcgcaaggc tccgctatcg aaacggacgg cttcgcagta
     4441 atcacgttcg cgtatcaacc cgccgctttt ttcgctgaaa cccataaacc aaaaatattt
     4501 ttgaacaccc tcctgcggcg aaggcatcag atgcagcctt tcattgcttt cctccgcgct
     4561 caaatattcc caattcagcc aaagcggctt gtgtcggcgg ataatgtgca gcacattttc
     4621 gggcaggtcg caggcaaaag tttcgatgac gacatcggga acaggcgcgg tatcaatatc
     4681 tgccgcatcg gaatgccaag tgcggacatg aatatcctga tgaacgcagg gaacatcggg
     4741 caaatcaggg caaagcgcac gcaaggcgga cacatcgtcc gtccacaaat gcacctgcca
     4801 accgagttcg cggtgcaaaa cacgggcaag ccgccacgaa acgccgatgt cgccgaaatt
     4861 gtcgatgacc ttgcaaaaaa tccagcagac aaaaggagga gtattcatag aaataacgga
     4921 aacgggctaa aacgcgccaa aatagtggaa caaatacaca atcagcaaaa taatcggaat
     4981 aaacagcaac atagtttgac gtttcaaatc aaactcttgt ttcaaatgat gcttgatggt
     5041 gtcgaaaagg acgaatttaa acaaaaacgt cgcttcgcag gcaaggatga tgccgttaat
     5101 cagatgctgg ggtttgtctt cgggcggatt ggcgacgaaa acggcaagcg tcgccaaggg
     5161 tatcaggcag acgacaagcc agcggacaag caggtttcgg gacattgcaa ggctttcaaa
     5221 aaagcaaaac gccattatcg ccccaagcgc acgccttgtc taacggacgc gccggcgatg
     5281 ccgtctgaag ccttgccgca ggaaaacacc gcaccgccga atctttaaat acgcccgaga
     5341 cgggcgttcc ccgaaaaatc ggacgctgcc gccgatgcct gcggacaagg ctgcatcggg
     5401 cgcgggcata ttgaaaaccc ggcgcgtcgg tttgaaat
//
LOCUS       DAWGBY010000128         5349 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.128, whole genome shotgun sequence.
ACCESSION   DAWGBY010000128 DAWGBY010000000
VERSION     DAWGBY010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5349
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.128"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            323..1756
                     /locus_tag="WHG62_001797"
     CDS             323..1756
                     /locus_tag="WHG62_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ1725867.1"
                     /translation="MNEYSQLIKHPDISLSPISDGIGVGNPATGEILAYVRKTDSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWCWYFLVKENKEALARLMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIIKPASLTPLSAYALASLAYEAGVPQDLLPVVSGRASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDAFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALSKGAICLTGGKRSALGGTFFEPTVLSGITAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            1866..2654
                     /locus_tag="WHG62_001798"
     CDS             1866..2654
                     /locus_tag="WHG62_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ1725868.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDQWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            3022..4578
                     /locus_tag="WHG62_001799"
     CDS             3022..4578
                     /locus_tag="WHG62_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ1725869.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4595..5341
                     /gene="surE"
                     /locus_tag="WHG62_001800"
     CDS             4595..5341
                     /gene="surE"
                     /locus_tag="WHG62_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ1725870.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKNPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHAD"
BASE COUNT         1252 a         1349 c         1520 g         1228 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataatgt ttggattttt gccatactct accacacgtt
       61 gcaactgcaa tctttgttcc ttatatatta tcaaagggct gcattacttt tctttctaaa
      121 ttaccattgt ataaaaagta tttttcttaa acgacaggga ttgcgcccgc gccatattca
      181 gacaccgccc ggatgttgca ctgcccgatc ggatgcttca gacggcatcg gaagggtttg
      241 cagttttgga atatgaagat gataatgtcc gcgagattga cggcatttga aagcggttat
      301 tccgcatacc ggaggacacg aaatgaacga atattcccaa ttaatcaagc atcccgatat
      361 ttccctttcc ccgatttcag acggcatcgg ggtcggcaat ccggcgacgg gtgaaatttt
      421 ggcgtatgtc cgcaagacgg attcggacaa actgaaaaac ctgattcaaa aggcggcggc
      481 agcgcaaaaa ttatgggcgg cgaaaactgc tttggaacgc gccgacatat tgtggtgttg
      541 gtatttttta gttaaagaaa acaaagaagc actggcgcgc ctgatgacga tggagcaggg
      601 caaaagcctg accgagtcgc gcggcgaaat tgattatgcg gcttcgtttg tgcgctggtt
      661 tgccgaagag gcgcggcgga ttgacggcga tgtgctgaca agcgtgaaag cgtcgcaaaa
      721 actggtcgtg ttgaaacagc ccgtcggcgt taccgctgcg attacgccgt ggaactttcc
      781 gtccgcgatg attgcgcgca aggccgcgcc tgctttggcg gtgggttgcg cgatgatcat
      841 caaacccgca tcgctcacgc ctttgagtgc gtatgccttg gcttcgttgg cttacgaagc
      901 gggcgtacca caggatttgt tgcccgtcgt cagcggccgc gcatcggaaa tcggccgtga
      961 atttgccacg aacccgatta tccgcaaaat cagcttcacc ggctctaccg aagtcggtgc
     1021 gaaaattttt gccgacagcg cggcggacat taaaaaactc agtttggagc tgggcggcaa
     1081 cgcgccgttt atcgtgtttg acgatgccga tttggacaaa gccgtcgaag gtgcgctcgc
     1141 cagcaagttc cgcaacagcg gtcagacctg cgtctgcacc aaccgcgttt acgcccaatc
     1201 gggcatttac gacgcatttt gccgcaaatt gagtgaaaaa gcagccgcgc tcaaattggg
     1261 caacggcttg gaggatggcg taaaccaagg gccgttgatt gaggaaaaag cggtggaaaa
     1321 agtcgagcag cacatcgccg acgcgctctc aaaaggcgcg atctgtctga ccggcggcaa
     1381 acgcagcgcg ttgggcggaa cgttttttga gccgactgtc ttaagcggca ttacggcaca
     1441 aatggcggtg gcacgcgaag aaaccttcgg gcctttgtgt ccggtattcc gttttgaaac
     1501 cgaagccgag gtcatcgagg ctgcgaacaa tacggaatac ggtttggcag cttacctttt
     1561 caccgccgac accgcccgcc aatggcgcgt cggcgaagcc ttggaatacg gcatggttgg
     1621 catcaatacg ggcttaatca gtaatgaagc ggcaccgttt ggcggcgtga aacgcagcgg
     1681 tttgggacgt gaaggcagca aatacggtgc ggacgaatat ctagaattga aatatctgtg
     1741 tatggatgtc gggtgacgga tgccgtctga atggcagggt ttcagacggt gccgcatttt
     1801 aagcagtctc tatctgttgt acaatgcgcc ctgtttttac ggttattttt gatgtgaatt
     1861 aagatatgat ggaaaacgga aaaacagtcc cgagatggcg ttttgccttg aaaagtgcgg
     1921 gttggcatct cttaatcagc ctgtcggttg cagggctggc ggcattgctg gtttttaagg
     1981 tttggtatcc ttatccttat gccgagctga cgggagggct gtcgctttat cagctggtgg
     2041 tggctgtcga tattgtatgt ggtccgctgc tgactttaat tttggcaagc ccgaagaaaa
     2101 agacaaaggc acgcatggtc gatttttcca tggtcggcat catccagctg gcggctttgg
     2161 tgtacggtct gcacagcgtt tcgctggcgc gtcctgtggt ggaagcgttt gaacaggatc
     2221 gtatgaccat tgttacggcg gcggaagtcg tggtcgaaga tttgcacaaa gcccccgaag
     2281 ggctgcaaag cctgtcgtgg ttcggcatcc gccgcattgc attgaaagaa cctgaggatg
     2341 cggatgagaa gaacaagacg ctggatttgt ccctgaaagg tatcgagccg agtatgcgtc
     2401 ccgaccagtg gctgccgtat tccgacaagg aagcagaaga aatccgcaaa catctgaaac
     2461 cgctgaaagt cttggcggat gcgagaaaaa cgacggttgc ggacattctg aaacaggcag
     2521 gtctcgccga aggggaggag ctgtattacc tgccgtttac cagcagcagg cagaaagagt
     2581 ggatagtcat taccgataaa gagggcaaca ccaaaggcta cgcgccgata gacggcttca
     2641 tcatcacccc ttaagcgttg ggactccgtc cgcactcgaa catccgttct tcgcggcggt
     2701 agaatcagac tgtatttgag aggggcgcaa cccctcaatc agggcaacac ataggggaag
     2761 gctttatgtg ccgtccgtgt gttgaaacat ttcaaaataa gctcatgccg tccgaacatc
     2821 ctttcagacg gtatggcatt ttgccattgc cccgataagc tgttaaacta tttaaattat
     2881 ttcgaccgaa ggtacacgca catgcaagac cccgagcaga gcagcaagcc cgcccgccgt
     2941 tttttgtgcg taccgtctgt tcaggcagct tgagcgcttc aggctgcctt ttcgcgtttg
     3001 aacttgagga atacgaaaat catggatttc agttggttgg cagaaccgca tacctggata
     3061 ggttttgcca cgcttttggt gttggaagtt gtattgggga tagacaatct tgtctttgtg
     3121 gcgattttgg caaacaaggt ccagcccgca cggcgcgacc gcgcacggat tatcgggctg
     3181 gggctggcag tcgtcatccg catcattatg cttgctttta tggcgcacat catcacgctg
     3241 accgagccgc tgttccaaat cggcggcctc gccgtttccg gcaaggacat gattatgctc
     3301 gcgggcggta ttttcctgct ttacaaagcc accaccgaac tgcatgaacg cctcgaaggg
     3361 cacaaccgtt ttaccgttgc cgacaaccaa aaaaaacacg cgccgttttg gggcgtggtc
     3421 gcgcaaatcc tgatactgga tgccgtgttt tccatcgatt cggtcattac tgcggtggcg
     3481 atggtcgatc atatcgtcgt ggcgatgggt gcggtcgtcg tcgcgatggc ggtgatgatt
     3541 tccgccagca aactcttgac cgaatttgta gacagacacc ctaccgtcgt gatgctctgc
     3601 cttggttttt tgttgatgat cggtttcagc ctgattgccg aagccttcca tttccacatt
     3661 cccaaaggct acctctacgc cgccatcggc ttctcgattt taatcgaact gtttaaccag
     3721 atttcccagc gcaacagccg caaaaacgac tacatcggca gctcgtggcg caagcgcacc
     3781 gccgaaaacg ttttgggtat gatgggcata cgcgaaagcg tgcttgccga tgcgggcggc
     3841 gaatccgggg acgacgcgca ttttgaagaa aacgaaaaat cgatgatacg cagcgtgctg
     3901 acgcttgccg aacgcccgat tatgggggtg atgatcccac gccgcgacat cgaacggctg
     3961 gacatttccc aaagccgcga agaacagtgt gcccaactgc aaaacacgcc ttacagccgc
     4021 ctgctcgttg tcggtaaggc gggcgtggac gaacctttgg gctacatcaa caaaaaagac
     4081 ctgctgtccc aactgctgga aacaggcggt ctcgacattc agacggcatt gcgccagcca
     4141 ctcgtcctgc ccgacagcac caccgcgctg ggcgcaatcg aactcttccg ccaaagcagc
     4201 gcggattatg ctttggtggt ggacgagttc ggcgcggtat tgggcatggt aaccatgaaa
     4261 gacctgctcg aaaccatcgc aggcgagttc cccgaagaat ttgagcgcga agaagaacca
     4321 gccgttcagg ggaatcccga tgaaagcctg acggtggaag gcgcgttgga atatgtggaa
     4381 ctcgcaccgc aactcaacct gccgcagcag gaggaagatg ccgatttcca tacggttgcc
     4441 gggctgatta tggaagaatt gcaaaccatc cccgatgtcg gcgattttgc cgatttccac
     4501 ggctggcggt ttgaagtggt cgaaaaagaa gggcagcgca tcgagcgggt caaaatcacc
     4561 aaattgcccg aagaataagc attcaggata gaaaatgaac gttttgattt ccaacgacga
     4621 cggctacctc tccgaaggta ttgccgtttt ggcgcgcgtt acggcggaat ttgccaacgt
     4681 cagggtggtt gcgcccgaac gcgacaggag cggggtcagc aattcgctga cgctggaacg
     4741 ccctttgcag ttgaaacagg cgcaaaacgg gttctactat gtcaacggca cgccgaccga
     4801 ctgtatccac atcgggcagt ctgtattttc ggattttcag gccgattttg tcttttcggg
     4861 catcaaccgg ggcgcgaata tgggggacga cacgctttat tcggggacgg ttgcggcggc
     4921 aaccgaagcc taccttatgg gcatacccgc tgtggcgttt tccttaaacg acgcttccgg
     4981 acgctattgg gcaaccgcag aaaaggcact gtggacattg ttggcgcatt ttttcaaaaa
     5041 ccccccgcag tcccctattt tgtggaacat caatatcccc gccgtcgagc cggaagatgt
     5101 gcggggcatt aaaatcgccc gtttgggcag gaggcatcac ggtcagaacg tcatccccgc
     5161 gcgcaatccg cgcggcgaac agatttattg gataggcccg gtaggcaggg tttccgacaa
     5221 agaagaggga acggatttcg gtgaatgcgg cgcaggtttc attaccgtaa cgccgctgca
     5281 aatcgacctg accgcctatc cggacatggc ggaaacagcg gcgttctggc atgcggactg
     5341 accgtttca
//
LOCUS       DAWGBY010000129         5341 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.129, whole genome shotgun sequence.
ACCESSION   DAWGBY010000129 DAWGBY010000000
VERSION     DAWGBY010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5341
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.129"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(103..2934)
                     /gene="lbpA"
                     /locus_tag="WHG62_001801"
                     /gene_synonym="tbpA"
     CDS             complement(103..2934)
                     /gene="lbpA"
                     /locus_tag="WHG62_001801"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ1725871.1"
                     /translation="MNKKHGFQLTLTALAVAAAFPSYAANPETATPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTYDIQREKTEPFFSVEGERESK
                     PVAKLAGYGKYLNRQLNRWVKERIEQNKPLSAEEEAQVREAQARHENLSAQAYTGGGR
                     ILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAEKFR
                     DKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVKGIGLKYSRTKFIDEHHRRRRMGLLYR
                     YENEKYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSSD
                     RFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAISRPEQLSHNAARISESTG
                     FDDNNQDKYLLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFD
                     FSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQE
                     LFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADQ
                     KTKLPDSTGRLTEIDIRDYYNAQNMSLQGINILGKIDWNGVYGKLPEGLYTTLAYNRI
                     KPKSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAY
                     LAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAES
                     TANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(2931..5069)
                     /locus_tag="WHG62_001802"
     CDS             complement(2931..5069)
                     /locus_tag="WHG62_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ1725872.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPATFKSK
                     DVPTSPPAGPSVETTPVNQPAVGAAMRLPRRNIAAFDKNGNEIPNSKQAEEYLPLKEE
                     DILFLDGTPKEQADKLKKEINGRYPNVKIYTSDLKDAVYKYEHVRAGYVYTRFGTDEI
                     EQNSGGKQVTHRLGYDGFVYYSGERPSQSLPSAGTVEYSGNWQYMTDVKRHRAGKAVG
                     IDNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDQKTLNGKLIKNQYVQRKTD
                     QKKPLTIYSITAKLDGNRFTGSAKVNPDLAKNPAGNERLFFHADADQRLEGGFFGDKG
                     EELAGRFISNDNSVFGVFAGKQKTEAANAADTKPALPSGKHTKILDSLKISVDEAADK
                     KARPFEVSSMPDFGHPDKLLVEGREIPLVSQEKTIQLADGRKMIVRACCDFLTYVKLG
                     RIKTERPAVQPKAQDEEDSGINNGEESEDEDEVVEEEAEEEADEAEADEAEDEEAEDE
                     EAEEIEEEAEEEETEEKSPAEGNGGSGSILPTPEAPKGRDIDLFLKGIRTAEADIPKT
                     GKAHYTGTWEARIGVPDKKDDQPGTTFIQKDSYANQGAKAEFDVDFGAKSLSGKLTEK
                     NDTHPAVYIENGVIDGNGFHATARTRDNGIDLSGQGSTSPQSFKANNLLVTGGFYGPQ
                     AAELGGNIIDSDRKFGAVFGAKKDNKEVEK"
BASE COUNT         1139 a         1446 c         1249 g         1507 t
ORIGIN      
        1 ggaaatcttg tttatattga atcaaaaaaa cctgcacctt aatcagttgg cggtttagtc
       61 cgacttttgg ggtgcagatc aagctttcag acggtatttc ctttaaaact tcatttcgag
      121 cgcgagactg aagttcctgc ccggtgcggc ataccttcca tagttgctgt cgccgccgtg
      181 ccggtttgcc gtgctttccg cggtctggcg caaggattcc caagtaacgt agcggtagtt
      241 gccgatattg tagatagccg ccctcaaggt cagccgtttt ttcagattca gataggcgga
      301 aacgtctgcc gtcgaccaag aagacgacgc tctttttgtc gaatatcgtt tttgatcgcc
      361 tgccagataa gcaagctcgt cagggttttt ccctttggaa taggtcagca taatgtttgc
      421 gccccatttc ccctcgggct ggtcgtatcc gaaccccaaa acataacgcg acggctgtac
      481 cgcatccaaa gcatagctgc ggagagacag gcccggtcgg ttggataccg atttcggttt
      541 gatgcggttg tacgccaaag tcgtgtacaa accttcgggc agttttccgt acacgccgtt
      601 ccagtcgatt tttcccaata tattaatgcc ttggagcgac atattttggg cattgtaata
      661 atcgcgtata tcaatctctg tcaatcgtcc tgttgaatcc ggcaatttgg ttttttgatc
      721 ggcaacggca atcatatcgg tatagcggtt gcggaagctg ctgatttcca aaaagccgaa
      781 atcacccttc cactgcaaac cgatttcgcg gttggctgcc ttttccgatt tcagggcggg
      841 acgctgccag cctttcggat aatcgtgata aatgtctatc ccgaaaagtt cttggaatga
      901 gggcgttctg aagccgctgg aggcgcggta agacaaagaa aaatgccggt tcggtttgaa
      961 cacgatgccg ctgttccacg aacggtcaac ataccgtccg ctgcggacga gttcttccga
     1021 cgtggtgaag tttttccggt catacctgcc gcccaagctg aaatcgaaat atttgccgat
     1081 tgaaaaacgg tcgttcaaag aaatatggat attgctgccg ttgatttttc ttggcacgca
     1141 tttgcgggaa cgcagggttt cgatgtagcc gcagaccgac ccttcgacga cttcgggctt
     1201 acccaaaaga tacttatctt gattgttatc atcgaatccc gtggattccg aaatccttgc
     1261 cgcattgtgg gaaagctgtt cggggcggga gatcgctttg gaagcatcgt aaccgaagcc
     1321 caaagtcaga tggtgtttcg tccatttgtt tttcagcgat ttctcaaacg aggcattcaa
     1381 aacattgtgc tgttcgcggt agtggaaacg gtcgctgctg tcgtaggaat acggtttgtc
     1441 cgccgacgcg cggcaggatt tgtccacggc aggatacacg gcgcaattca gcttcagcgt
     1501 gttgttgtcg gttgccacgc cctgtttgtc aaacgacaac accgccttat ccgcccagtt
     1561 gtccgagtat ttctcatttt cataacggta cagcaaaccc atacggcggc ggcggtgatg
     1621 ttcgtcaata aatttggtgc gggaatattt caaacctatg cccttgacca actttttatc
     1681 gcccttccac tcttctatat tcggcacaaa atacaagccg tcgcggaaat cgtcgccgtc
     1741 gtacacccca ctcttgtctc taaacttttc cgcctcgtcc gtaccgtaat actgtttttc
     1801 cgtcatatcg cggatgtcgt aacgctgttt ggtatcctca aacacgccgc cgacataatg
     1861 cctgccgccg aagcggtagc ccagcttggc aagccacgaa ccgctgcggt aatccatcgg
     1921 atcgggcaat atcctgccgc cgcccgtgta agcttgggcg gacaggtttt cgtggcgcgc
     1981 ctgcgcctcc cgcacctgcg cctcttcttc agcacttaaa ggcttatttt gttcaatacg
     2041 ttcttttacc cagcggttaa gctggcggtt caaatatttc ccgtagcccg ccaattttgc
     2101 cacgggcttg gattcacgct cgccctctac tgagaaaaat ggctctgttt tctcgcgttg
     2161 aatatcgtat gtctggcgga acgcgtccaa acggtttatg ccgtatgcca ccccgtccgc
     2221 aatatcgccg tgcgggcgcg tttcccgccc ttggcgttcg gttcggatta acagcccttc
     2281 ccaaccgtct ttgctgaacc ccgcgccgag cgacttcata aattggcggt ttttactgcc
     2341 gtaggcggtt tttgcctgta tcccccagct tttgccgtct gaaatcaggt ctgccgcctc
     2401 tttggtgcgg aaagcgaccg cgccgccgag tgcgccgctg ccgtgatcgg acgaaccggc
     2461 acctttgtcg atttccaccg tgctgatgtt ttcatattcg atttcgttga ttgcaccgct
     2521 gccgccgcgt ccgccgtatc cgctcaacga tccctgcacg gtaaacgcct gtatttgggc
     2581 aacgccgtca accgaaaccg ccacacggtt tttatccacg ccgcgtatcg agtagccgcc
     2641 gctcgcgccg ttgccctgtt cgacaaccgc cacgcccgga tcgtagcgcg tcaggtcgcg
     2701 gataccgagt acctgttctt tgttcaacgt ttccgacgtt ttgacgattt tgcccaaacc
     2761 ggtcgcctct ttcgatcgcc gtcccacttt ggcggcacgg acggtaacct ctttcaggga
     2821 ttgggtctgc gccgcatcag gtgtcgccgt ttcggggttt gccgcatatg atgggaaagc
     2881 ggctgcaaca gccaaggcag tcagggtaag ctgaaaaccg tgtttcttat tcatttttcc
     2941 acctctttat tatctttctt cgcaccgaat accgcgccga atttccggtc gctgtcgata
     3001 atattaccgc ccaattccgc cgcctgcggt ccataaaagc cgcctgttac aagaagattg
     3061 ttggctttga agctctgcgg gctggtcgaa ccctgcccag aaaggtcaat accgttatcc
     3121 cgagtgcgtg ctgtcgcgtg gaaaccgttg ccatcaatca caccgttttc aatataaaca
     3181 gcggggtgtg tatcattttt ttctgtcaac ttacctgaaa gcgacttcgc gccgaaatca
     3241 acgtcaaatt ctgcttttgc cccttgattc gcatagctat ccttttgaat gaacgtagtg
     3301 ccaggctgat cgtctttctt atctggtacg ccgatacgcg cttcccaagt gccggtatag
     3361 tgtgcttttc cagtttttgg aatgtcggct tccgccgtgc ggataccttt caggaaaagg
     3421 tcgatgtccc tgcctttagg ggcttccgga gtgggcagga tgctgcctga accgccgttg
     3481 ccttctgccg gcgatttttc ttcggtttct tcctcttcag cttcttcttc gatttcttca
     3541 gcttcctcat cttcagcttc ctcatcttca gcttcatcag cttcagcttc atcagcttct
     3601 tcttcggctt cttcttcgac gacttcgtct tcgtcttcgc tttcttcacc gttattaata
     3661 cccgaatcct cttcatcctg cgccttcggt tggacggcgg ggcgttcggt ttttatccgt
     3721 ccgagtttca cataggtcag aaaatcgcaa caagcacgga cgatcatttt cctgccgtcg
     3781 gcaagctgga tggttttctc ttggctaacc aaaggaattt cacgcccttc gacaagaagt
     3841 ttgtcgggat gaccaaaatc gggcatagag gaaacctcaa acggacgggc ttttttatca
     3901 gccgcctcgt caacggaaat ttttagagaa tccaagattt tggtgtgttt tccagacggc
     3961 agggcaggtt ttgtatctgc tgcgtttgct gcctctgttt tttgtttgcc tgcgaatacg
     4021 ccgaatacgc tgttgtcgtt gctgataaac cgtccggcaa gctcttcccc cttatcgccg
     4081 aaaaaaccgc cctcaagccg ctgatcggca tcggcatgga aaaacaaacg ctcattaccg
     4141 gcagggtttt tcgctaaatc aggattgacc ttggcactgc cggtaaagcg gttgccgtcc
     4201 aattttgcag taatgctgta aatggtcagc ggtttctttt gatcggtttt cctttgcaca
     4261 tactgatttt taatcagctt gccattcaga gttttttggt cgaaatcaac cgtatatttg
     4321 gcaggatgct tttccctttc gtcgacatcc ttagccgcat aagaagttgc accaacatcg
     4381 ttaccataaa atgtgatata acccaaattg tcaatgccaa ccgccttacc tgctcgatga
     4441 cgtttgacat cggtcatata ttgccagtta ccagaatatt ccaccgttcc cgcactcggt
     4501 aaagattggg aaggacgttc tccagaataa tatacaaaac catcataacc taagcggtgg
     4561 gtaacctgct taccacctga gttctgttcg atttcatctg ttccaaatct agtataaaca
     4621 tatccggccc ggacatgttc atatttatac acagcatctt ttaaatcgga cgtgtagatt
     4681 tttacattag gataccgtcc gttgatttcc tttttaagtt tgtcagcctg ttctttcggc
     4741 gtaccgtcta aaaacaggat atcctcctct ttgagcggca gatactcctc tgcctgctta
     4801 ctattgggaa tttcattacc atttttatca aaagctgcga tattccgcct tggcagccgc
     4861 attgccgcac cgacggcggg ttgattgacc ggcgtggttt ctaccgaagg cccggcaggg
     4921 ggcgaagtgg gaacgtcctt agacttgaaa gtggcggggt acgcggtcgg cgttgattcg
     4981 acaacaggct gcacgccgaa attaccgcca atacaagatg ccaaaagtaa gggcaacaag
     5041 acaatgccgc cataattcgg tttacacatc cctacttttc ctcctatttg attaataata
     5101 attatcatta tattaatatg tacagataat atcaacccgt ttttatagtg aattaacaaa
     5161 aatccggaca aggcgacgag ccgcagacag tacagataca ttccgtcatt cccacgaacc
     5221 tgcaccacgt cattcccacg aacctgcacc acgtcattcc cacgaaagtg ggaatccagt
     5281 tcgttcggtt tcgcttgttt taagtttcgg gtaacttcta cttcgtcatt cccacgaacc
     5341 t
//
LOCUS       DAWGBY010000130         5332 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.130, whole genome shotgun sequence.
ACCESSION   DAWGBY010000130 DAWGBY010000000
VERSION     DAWGBY010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.130"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(288..818)
                     /locus_tag="WHG62_001803"
                     /pseudo
     CDS             complement(288..818)
                     /locus_tag="WHG62_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(1826..2596)
                     /gene="xth"
                     /locus_tag="WHG62_001804"
     CDS             complement(1826..2596)
                     /gene="xth"
                     /locus_tag="WHG62_001804"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ1725873.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(2650..2937)
                     /locus_tag="WHG62_001805"
     CDS             complement(2650..2937)
                     /locus_tag="WHG62_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ1725874.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSGHLNRLRAGGLVDFTRYHRIIEYRLISEDAATILRTIRDLENKRAVWC"
     gene            3039..3272
                     /locus_tag="WHG62_001806"
     CDS             3039..3272
                     /locus_tag="WHG62_001806"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725875.1"
                     /translation="MDDCTGLYVPFPTFFANTRKGGLSDGIKLPPLPCLTLLPNGIIR
                     IVQKMPYNRRTSCPADASVPSGKQNTCLKRCFF"
     gene            complement(3405..4286)
                     /gene="nadC"
                     /locus_tag="WHG62_001807"
     CDS             complement(3405..4286)
                     /gene="nadC"
                     /locus_tag="WHG62_001807"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ1725876.1"
                     /translation="MPSENTLFPLPDPLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGISTATARAVAEVAKYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
     gene            complement(4361..5299)
                     /locus_tag="WHG62_001808"
     CDS             complement(4361..5299)
                     /locus_tag="WHG62_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725877.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1216 a         1368 c         1413 g         1335 t
ORIGIN      
        1 aaataactga aaccgaacag actagattcc cgcctgcgcg ggaatgatga attcatccgc
       61 acggaaacct gcaccacgtc attcccacga acctacattc tgtcattccc acgaaagtgg
      121 gaatccagga ttcagggacg gagaaacctt ttttcccgat aagtttccgc accgaccggt
      181 ctagattccc gcctgcgcgg gaatgacggt tcgggtattt ctgacgattc atcgagccgt
      241 agcaactgta tttttcaccc cgtcgggcaa aaataccaaa actcaaatca agccgtccgg
      301 ataccgtttt cggcggtatc gttttcggcg gtatcgtttt cggcaaaata atcacgcatc
      361 cgggcattcg atatcgtcag cagtttgcgc atacatgccg taacggcaac cttatacggc
      421 ttaccctcgg acagcaggcg ttggtagaaa tcccgaataa gcggttcaaa acgtgtcgct
      481 gccacggtag ccatatacag cgccttacgt accgcagact ttccgccaaa gcagcggctt
      541 ttgaatttgg tttccccgct ctccctcggg tgcggggcaa tgccggccaa actcgctatc
      601 cgtttgtgcg acagccgccc caattcgggc agcatcgcca tcagcgtagc cgtcgttatc
      661 gaaccgatgc ctttgatttg ctccgccact tgggctttgc cgtcaaaatg cgtgtgggtg
      721 tggtcgtcga tttgtttgtc caattcgtca atcagccggt caaaatgggc aatcagttgt
      781 ttgacgcttc cgacttgcgt ttcatgaaac tgatgcagat atagtggatt aacaaaaatc
      841 aggacaaggc gacgaagccg cagacagtac aaatagtacg gcaacgctgt actggtttaa
      901 atttaatcca ctatattttg taatagctgc cattatgcct actaggatat ataccttcta
      961 tataatcctt atttaaataa aaacccttat aaaaatctgt gttatctgtc gggattgaaa
     1021 aaaagatttt atctttctca tcaggtttat atttgctatc aatatcaaaa agagaataag
     1081 gattacaatg agttcgacat actaggtaaa aatttatatc ttggatcatg aaatattcga
     1141 tatttatcag gatcgaaaga tgctaaaaat tcatcaatat cggtactgga tattttgtca
     1201 tcactaataa acatcgctag agatgggcga ctttgatttt ccatttgttg attagtaaag
     1261 gatataaata ctaacttgcc attgtcaaac cacatagatt tatatagtgg attaaattta
     1321 aaccagtacg tcgttgcctc gccttgccgt actatttgta ctgtctgcgg cttcgtcgcc
     1381 ttgtcctgat ttttgttaat ccactatagt tattgccttt gggagaatca attctgacag
     1441 cacataacat aggttcatct ttacagtcgt tatattgggt ttcatcaaac tcaactgcat
     1501 agcacaataa aggcaatagg aaaaaaagga gattaattta ttactataca taaggcagcc
     1561 tgactattca ttctaaaata aatccggttt ttaatatttg attctgctcc ggattatata
     1621 cataataaat tttactgctc caaaatctga tattaaccct atggatttca taaatttttc
     1681 agaaaaatag gctgtgcttg aacaatccgc cgactccggc tgtttgtcag ggaaaaggca
     1741 attattttcg gttagtcagc agcctatcct attgaatcac ttaaagatat ggatgtttgt
     1801 caacgccata tcaaaacacg gtcttttacc aatcgaattc tgccgtcacc ggcgcgtggt
     1861 cgctcggacg ctccagcgcg cgcgtctcca aatcaacgcg gacatccttc aacgccgccg
     1921 ccatcgcagg cgacaccaaa atatggtcga tacgcaggcc cagtttgcgt tggaacatcg
     1981 cgccgcgata gtcgaaccag gtatagaacg cgccttcggg atggacttgg cgcaggctgt
     2041 cggtcagtcc caaatccagc aggtttttga accactgccg ttcgacggac gaacagtgga
     2101 ttttttcgtg ccatttttca gggtcgtaac agtccgcatc ggcaggcgcg atattgaaat
     2161 cgcccagtag caccagtttg ccgtagcggg tcatttcatc gcggacaaat tcggttaacg
     2221 cggcaaacca ttgttcttta tatttgaatt tcgggctgtc gagggcttcg ccgttgacgc
     2281 aatagacatt gatgacgcgc acaccgccga cggttgccgc aatcacgcgc cgttgcggat
     2341 cgtccggcag cgcgggcagc ccgatatgca cgtcttccgg cgcgttgcgg ctgacgattg
     2401 ccacgccgtt gtaggttttc tgcccgctcc aaacacagtg ccagcccatc atttgcaaag
     2461 cggcggccgg aaatttgtcc tgatcgagtt tgagttcctg caaaaccaaa atatcgggcg
     2521 gattgtcggc aagcaggttt tgcacctgcg gcagccgcac attgagcgaa ttgacgttcc
     2581 aagtggtgat tttcataaca tttccgaaaa atgccgtctg aaacgttcag acggcaaaag
     2641 gaaaggattt taacaccata ccgcgcgttt gttttccaaa tcgcggattg tccgcagaat
     2701 cgttgccgcg tcttcggaaa tcaggcggta ttcgataatg cggtggtaac gcgtaaagtc
     2761 caccagaccg cccgccctca ggcggttcaa atggccggaa acggcggtgg ccggcaggga
     2821 taaggatttt gccagttcgg cgatattgcg ttcgctgtcc aacagttgga tcagtatcgc
     2881 catacgttcg ggatgcgcca taagtttgag tatggtgtgg agcggtattg tgttcatcgg
     2941 tattcctaaa acctttgccg cccgccaagc ggattgacgg gcgacagata tggatgattg
     3001 tgattatctt tataaatcgt attataaatc aaatatttat ggatgattgt acaggattgt
     3061 atgttccttt tcccactttt tttgcaaaca cgcgtaaagg cgggctttca gacggcataa
     3121 aactgccgcc cctaccctgc ctcaccctgt tgccgaacgg aatcatccgc attgttcaaa
     3181 agatgcctta caaccgccgc acgtcttgcc ctgccgatgc ctccgtgcct tcgggcaaac
     3241 aaaatacctg cctgaaacgc tgttttttct aaagcatcac gaccttcacg aaaaatgccg
     3301 tctgaagaat atttcagacg gcatttcctc cttgaggcaa taaccggatt acggttaggc
     3361 ggttccttgt ctgacatatc agacaactgc cgacacccta aaactcatgc caagaaatcc
     3421 aaacctatgt ccaacgagcg gctgctgtgg gtcagatagc cgagggcgat gccgtccacg
     3481 ccggtttgcg ccacgcgctt caggcggtcg aagccgatgc cgcccgatgc ttcgcaatag
     3541 acggtgtggg ggtgggcggt ttgcgtgtgg cagcggtttg ccgcttcttt cagggtttcg
     3601 tcgtccatgt tgtccagcaa aatccgttcc gcgcccgctg cgatggcttc gtccagttgt
     3661 gccaacgtgt ccacttcgat ttccacgcag gtcaatgctc cgaccgcctg ttttgcctgc
     3721 cgaacggctt gggcgatgct gccgcaatag gcgaggtggt tgtctttgat gagtacggca
     3781 tcgtccaaac ccatgcggtg gttcacgccg ccgcccgccc tgacggcgta tttttgcagg
     3841 acgcgcagca gggggatggt tttgcggctg cacacgatgt ctgtaccgta tttggcgact
     3901 tcggcaacgg cacgcgcggt ggcggtggag atgccgctca agtgcgtgag gtagttgagc
     3961 gcggtgcgtt cggcggcgag cagcgcgcgg gcgttgcctt cgacggcggc aagcgtctga
     4021 cctgcgcgga cgacttgccc gtctcggatt tcggcttgga agcggacgga cggatccatc
     4081 gtctgaaagg cgaggcgcgc caagtccata ccggcgataa caccgtcttc gcggctgacg
     4141 aggaagagtt tggcggtttt gtcgggggcg atgacggcgg cggacgtaat atcgccgcgc
     4201 ctgcccaaat cttcgctcaa ggcttgttcc accatggggc gcaacagggg gtcgggcagg
     4261 ggaaagaggg tgttttcaga cggcatgggg tttcctttgt tgaaaaagat gggtgttgca
     4321 ccgatgggca aaacttcgtt tgatgccgtc tgaaaacggg ctaacggctg cccagcggca
     4381 gtccgatgtc cgaaatcagc ctgtcgggca ggacgtcgtc gcggaagcgg caaagctgcg
     4441 cgggacggcc tttgctgccc gatacgccgg tatccgacgg ctcgatgagg ttttgctgct
     4501 gaatctggcg gcggaagttt tgcttgtgca gcaatctgcc gctgatggct tcgacgctgt
     4561 tttgcagttg cagcagcgtg aattcgggcg gcatcagttc aaaaatcacg gggcggtatt
     4621 tgattttggc gcgcaggcga gacagggcgg tcgccagtac gcggcggtgg tcgtggcgca
     4681 tgggctgccc cgtgagcgcg aagtcgaagt ttgcctgcgg ctcggcggct tccactatca
     4741 gaccgctttc atacagcatt tcatagcgtt gtaaaacgta ttcttccgac cagttttccg
     4801 gttcgacccc ccagcacaaa tgaatgcgct tgagccgcat ttgacgcact tcctccgtgt
     4861 ccgccgaatt tgcccaaatg cgcaggcggc tgacgacggc gtcgcgctgt ccgccgtcgg
     4921 tgcgcaagtc ttcccacggg aaatagccgt agcagtcctg ccatttcgca tccgggtgca
     4981 ggatgctgtc ggctgcctcg cgcaccagcc ccaaatagct gacgtacaag acgggcatgc
     5041 cgtgttcgtt gcggcggtgg gtatcgacaa aggtgtaaag ctgttccaca tagcccatag
     5101 gctgcgaagt ctgcttggca acccacagct tcacgcccgc ctgcagggaa ttgcgcagag
     5161 gggagagcgg gccgttgggc aggagtgtgc cttgggcgac ggttaatacc cgcaggccgc
     5221 cgtcggtaac ggcaatcaat acgggaacca gctcgacgat gctttgcggc ggggcttcgg
     5281 cttcggggta ggcatccatg ctcggctttc tgcgggtggg aaaggcttta tt
//
LOCUS       DAWGBY010000131         5283 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.131, whole genome shotgun sequence.
ACCESSION   DAWGBY010000131 DAWGBY010000000
VERSION     DAWGBY010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5283
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.131"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            113..808
                     /gene="pgl"
                     /locus_tag="WHG62_001809"
     CDS             113..808
                     /gene="pgl"
                     /locus_tag="WHG62_001809"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ1725878.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            789..1775
                     /locus_tag="WHG62_001810"
     CDS             789..1775
                     /locus_tag="WHG62_001810"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ1725879.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1825..2673
                     /gene="hexR"
                     /locus_tag="WHG62_001811"
     CDS             1825..2673
                     /gene="hexR"
                     /locus_tag="WHG62_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ1725880.1"
                     /translation="MLSKISESLVNLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2794..4440
                     /gene="pgi"
                     /locus_tag="WHG62_001812"
     CDS             2794..4440
                     /gene="pgi"
                     /locus_tag="WHG62_001812"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ1725881.1"
                     /translation="MKHFHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGSQKHDSSTERLINLYLQTNRK"
     gene            4454..5005
                     /locus_tag="WHG62_001813"
     CDS             4454..5005
                     /locus_tag="WHG62_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ1725882.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHVCSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1341 a         1469 c         1398 g         1075 t
ORIGIN      
        1 aaagcagtcc cgatatttgg tatcaaaagc ataaacaact gttcggccga catattgctc
       61 aacccgtttc cataacggaa tatgccgtct gaaataaaaa aaggacacaa atatgtttgt
      121 ttggcacgaa tacgaaaatg cggcagaagc ggcgcagtct ttggctgacg cagtggcgga
      181 tgctttgcag ggcgcactgg acgagaaggg cggtgcggtg ttggcagttt ccggcggacg
      241 ttcgccgatt gcatttttca acgccctgtc gcaaaaagat ttggattgga aaaacgtcgg
      301 catcaccttg gcagatgaac gcatcgtgcc gaccgtccac gccgacagca ataccggttt
      361 ggtgcgcgaa tacctgttga agaacaaagc ggaagcggca atgtggattc ctatggtgga
      421 agacggaaaa actgaaaccg aattacatcc cgatgctgtt gtcgattatg cactgaaaca
      481 ttacaaacag cccgatgttt tggttttggg tatgggaaac gacgggcata cggcttcgat
      541 tttcccgaaa gctccgcagt ttcagacggc aatcgacggt tcggcaggtg tcgcgttggt
      601 gcataccacg cccgttaccg cgccgcacga gcgcgtcagt atgaccttgg atgcgattgc
      661 ccatacgggg catgtgtttt tggcgatacg gggcgaagag aaaaaagccg tgttcgacca
      721 agccgcacaa ggcgaaaacc gcgaatatcc gatcaacctc gttttgaacc atcaaggagt
      781 gaactgccat gtcttctacg ccgaataaac aagccggata tccccgactg gtcgccgata
      841 tcggcgggac gaatgcacgc tttgcgctgg aaaccgcgcc gcgcgtcatt gaaaaagccg
      901 ccgtgcttcc gtgtaaagac tacgatacgg ttaccgatgc ggtgcgtgcc tatctgaatc
      961 aaagcggtgc aacagccgta cggcacgcgg catttgccat cgccaacccg attttgggcg
     1021 actgggtgca gatgaccaac caccattggg cgttttccat cgaaaccacc cgtcagactt
     1081 tggggctgga caccctcatc cttttgaacg actttaccgc gcaggcattg gcggtaacgc
     1141 agacttcaag caaagacctg atgcaggtag gcgggcaaaa gcctgtcgaa tttgccccca
     1201 aagccgttat cggccccggt accggcctgg gcgtgagcgg attggtgcac agccacgcag
     1261 gctgggtggc tttggcgggc gagggcgggc ataccagttt cccgccgttt gacgatatgg
     1321 aagtgctgat ttggcagtac gccaaaaaca aatacggcca tgtttccgcc gaacgctttt
     1381 tgagcggcgc gggcttgagc ttggtttacg aggctttggc tgcaaaacag aaagccaaac
     1441 ccgccaaact gatgccgtct gaaatcacgg aaaaggcttt gagcggcgcg tcgcctttgt
     1501 gccgtcagac tttggacatc ttctgcgcca tgctcggcac ggttgcttcc aacctcgccc
     1561 tgacgctggg cgcgcgcggc ggcgtgtacc tgtgtggcgg cattattccc cgcgtgttgg
     1621 aatatttcaa aacttccccg ttccgcagcc gtttcgagaa caagggcagg tttgaagcat
     1681 atcttgccgc gattcccgtg tatgtcgtct tgagcgagtt tcccggaatt tccggtgcgg
     1741 ctgcggctct cgacaaccat ttgagaaacg tttaaccaca gcggctcctt gcagcggggc
     1801 tgcattatcg aagggcatat cattatgtta agcaaaatca gcgaatcact ggtaaacctt
     1861 tccggtgcgg aacgcaaagt cgccgaatgt gcattggcgg aacccaaatg gttcgtccat
     1921 gccgccgttg ccgaaattgc cgaacgtgcg tccgtcagcc agccgaccgt catccgattc
     1981 tgccgcagct tgggttataa agggctgccc gagttcaagc tcgccttgtc cgccagcatc
     2041 ggtcatgagg gtatgcccta tgtccacgaa gaactcaacg ccgacgacga tatggcaagc
     2101 gtggtcgaga aagtgttggg caatgccgcc gcctcgctgt tgggcgaacg ccgcttcctg
     2161 aaagagtcgg agctggaaaa cgccattgcc acgctgatgc acgcccgtcg cgtcgagttt
     2221 tacggtgtcg gcaattccgg cattgtggca caggacgcgc agcataaatt tttccgtttc
     2281 ggcatgtcca ccgtcgccta tgtcgatacg cacacgcagc tgatggcggc atctgttttg
     2341 agcgatcagg atgttttggt tgccatttcc aacacgggtt cgtctatcga acttttggat
     2401 gcggtcagca tcgccaaaga aaacggcgcg tctgtcatcg cactgacccg caacgattcg
     2461 cctctggcgc aacttgccga ctgcgtgttg agcgttgcca cacaggaaaa tgccgaactc
     2521 tacacgccca tggtttcccg cctcttgcag cttgccgtca tcgacattct cgccatcgga
     2581 cttgccctgc gcttgggcga tgctgccagc ctgcaattgc agaaaagcaa aaaaagcata
     2641 cacaacaagc acatcgatta cgacaaagat tgaccttcag acggcatccc acaaatgccg
     2701 tctgaaatgc cgaacaacgg tcgtcggcgg cttgcggcag tttccagcag ccttttcatc
     2761 ccacaacaaa aaacctcatt caggagcata tagatgaaac actttcacga cttacccgca
     2821 tggtcgaaat tgtggaacca ctttgacgac agcaaaacat tgcatatgcg cgaaatgttc
     2881 gagcaagacc cgcagcgtgc ggaacgctac tggctgcaag tcggcggact gacgctggac
     2941 tactccaaaa accgcatcaa cgacgaaacc atgtcgcttt tgttcgagct tgcccgagaa
     3001 gcaggcgtgc cggagcggat gcggcagatg ttccacggcg aaaaaatcaa taccaccgaa
     3061 aaccgcgccg tcctgcatgt cgcccttcgc aaccgcacca attcgccgat tgtggttgac
     3121 ggtgaagatg tgatgcccaa agtcaaccgc gttttgcaac gtatgggcga atttgcacac
     3181 gaagtccgca gcggaagctg gctgggctat accaaccaag tcattaccga cgttgtcaac
     3241 atcggcatcg gcggatcgga tttgggcccg ctgatgatgt gtaccgcgct caaacctttc
     3301 ggtcatccgc gcctcaatat gcacttcgtc tccaacgtgg acggctccca actgcgcgac
     3361 gtattgtcca aagtccaccc cgaaaccacg ctgttcatca tcgcctccaa aacatttacc
     3421 acgcaggaaa cgctgaccaa cgcgctgacc gcgcgcgaat ggtttttgaa tcatgcgggc
     3481 gacgaagaag ccgttgccaa acacttcgcc gccgtttcca ccaatcaaaa agccgtcgcc
     3541 gaattcggca tcgacaccgc caatatgttt gaattttggg attgggtcgg cggtcggtac
     3601 agcctgtggt ccgccatcgg attgccgatt atgctgtatc tcggcgaaga aaacttcatt
     3661 gaaatgctca acggcgcgca cctgatggac caacacttca tcaacacacc gctcgagcgc
     3721 aacctgcccg tcattctcgc cctcatcggc atctggtata tcaactacta cggcggcggc
     3781 agccacgtca tcgcgcctta cgaccaacat ttgcaccgcc tgcccaaatt catccagcag
     3841 ctcgatatgg aaagtaacgg caaacaggtt acgttggacg gcaaagcagt cggacacgaa
     3901 acctcgccga ttatctgggg cgaaacgggc attaacggcc agcacgcctt cttccaactg
     3961 ctgcaccaag gcacgcacat tacccccatc gacctgattg cctcgcttga aaaacgcagc
     4021 aacctgcccg gacaccacga aatcctgctt gccaacgtct tcgcccaagc agaagccttt
     4081 atgcgcggca aaacccccga cgaagtccgc gccgaactca aagcgcaggg tatggatgag
     4141 gcgcgcatcg aagagctggt cccgcacaaa accttctccg gtaaccgccc gaccaacctc
     4201 atcctgatgg acaaggtcaa cccgcgtaat atgggcagcc tgattgccat gtacgaacac
     4261 aaaaccttcg tacaaggcat catttggggc atcaacagct tcgaccagtg gggcgtggaa
     4321 ctcggcaaac aactggctaa aaccattttg ggcgaactga ccggcgaaac cgggtcgcaa
     4381 aagcacgaca gctcgaccga acgcctgatc aacctctacc tgcagaccaa ccgcaaataa
     4441 aacctgcgga aaaatgccgt ctgaacgccg accgtttcaa acggcatttt tatcgaacag
     4501 gaaaaccgtc ggtaaacttg cagagcgtgt gcaatcccga tatgatggtt tgcataaatt
     4561 taaacatgta tgttccgcag ctatggcact gattaaagag ccgttggaca aagcgaaaca
     4621 aaggaacgaa gaacttgaag cggcagaaga agcggcggcg caggaggcat tgggtcggga
     4681 gcaggaagtc gaccgcgtat ccgaatggga agaacgctac aagctgtcgc gcagcgagtt
     4741 cgagcaattc tggaaaggat tgcctcaaac cgtacagaat aagctgcaag cctcacagaa
     4801 aacatggaaa agcgggatgg ataaaatctg tgccaacaat gcgaaagctg aaggtgaaac
     4861 gccaaacggc ataaaattca gcgaactggc atgcaaaacg gcggaaaccg aagcacgctt
     4921 ggaagagctg cacaaccgta aaaaagccct tatcgacgaa atggccaggg aagcggacaa
     4981 gaaagaactg ccaaagcggc tctgaacagc gcggttcagg cactgcccgc cgatattgcc
     5041 gaaaccgtca tgcccgagta ccgcaactga caaaacggtt tgaatgccaa atgcgccgac
     5101 ggcgacgaat acggcgtggc acaatctgac tgccgtacca gagaaatcaa tgcgaaaacc
     5161 aaagaaatcc aaggttatct gattgactga aacttggatg cgggaatgtc ggcggctttt
     5221 gcgtttttgt cgtttttata gtgaattaaa tttaaaccga tacagcgttg gctcgcctta
     5281 gct
//
LOCUS       DAWGBY010000132         5185 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.132, whole genome shotgun sequence.
ACCESSION   DAWGBY010000132 DAWGBY010000000
VERSION     DAWGBY010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5185
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.132"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(223..468)
                     /locus_tag="WHG62_001814"
     CDS             complement(223..468)
                     /locus_tag="WHG62_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725883.1"
                     /translation="MLKSIEFNSHIRNRLAAYLKGRGLDFQTAMREEKGNKEIASIIH
                     GGLPVLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            580..1008
                     /locus_tag="WHG62_001815"
     CDS             580..1008
                     /locus_tag="WHG62_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ1725884.1"
                     /translation="MMYSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQNYSNTFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            1020..1496
                     /locus_tag="WHG62_001816"
     CDS             1020..1496
                     /locus_tag="WHG62_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ1725885.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GKRAWLTLKGYISEISRSEFEYEIPLADAEKIMETMCPFKMEKRRYPVRWNGSLFEVD
                     VFLGENAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSKHPFSSWKNAV"
     gene            complement(1846..2334)
                     /locus_tag="WHG62_001817"
     CDS             complement(1846..2334)
                     /locus_tag="WHG62_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ1725886.1"
                     /translation="MLKITLIAAYAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLHGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYRQAMPLATDLRITEVDLSVEGDAFFPEIDRTHWKEAGRTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(2402..3457)
                     /gene="aroG"
                     /locus_tag="WHG62_001818"
     CDS             complement(2402..3457)
                     /gene="aroG"
                     /locus_tag="WHG62_001818"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ1725887.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMERAG"
     gene            3809..4014
                     /locus_tag="WHG62_001819"
                     /pseudo
     CDS             3809..4014
                     /locus_tag="WHG62_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697603.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4073..4381
                     /locus_tag="WHG62_001820"
     CDS             4073..4381
                     /locus_tag="WHG62_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725888.1"
                     /translation="MTPWADAYADLRGKTKVMTTQMCASRDVSKSAEGWSVGIGLNVG
                     KQLTDSVGLEFDPYYRHKTICKPREIVLDGDKTKMGRSKSNEYGFRVTATFYSQLKSK
                     "
     gene            complement(4430..4534)
                     /locus_tag="WHG62_001821"
                     /pseudo
     CDS             complement(4430..4534)
                     /locus_tag="WHG62_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(4638..4844)
                     /locus_tag="WHG62_001822"
     CDS             complement(4638..4844)
                     /locus_tag="WHG62_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725889.1"
                     /translation="MFDGAKVVRRMEGNLWVFGMVALEKTCFKGQMPSENRFQTAFSV
                     YLKQTGKGSNILQSSYSHKRFIVN"
     gene            5117..5185
                     /locus_tag="WHG62_001823"
                     /pseudo
     CDS             5117..5185
                     /locus_tag="WHG62_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
BASE COUNT         1283 a         1330 c         1164 g         1408 t
ORIGIN      
        1 gggaatcccg aatttcaatg ccgcaagaat ttatcggaga tggacgggat ttaaaggtct
       61 ggattcccgc ctgcgcggga atgacggttt agaaatcacc cgaaacgaga aaaagaaccg
      121 aaaccgaaca agttggattc ccgcgcgggc gggaatgacg ataagcataa tttcaatctg
      181 ccatattgtc ttttcacttg cctgaaaaca gatttcagcc gcctatccct gcatccggcg
      241 gctgatgtag tcggcaatca aatcccgctt ttcccaaaaa aacttctgca ttttttgttc
      301 ggaatacagt ttgcgaacca gtacgggcag gccgccatga ataattgagg caatttcttt
      361 gttgcctttt tcctcccgca tcgccgtctg aaaatccaaa cccctgcctt tcagatatgc
      421 tgcaaggcgg ttgcggatgt gggaattgaa ttcgatggat ttgagcattt tgcctccgtt
      481 ttgcggtaag gatttattcg atttgtttat ccgcctgatt ttatcacgtt tcccaagcgg
      541 tttgcctgta caataccgct tttcggcagg gtgtgggcga tgatgtattc ttggttcaag
      601 ctgtttcact tgttttttgt catttcgtgg tttgcagggc tgttttacct gccgaggatt
      661 ttcgtcaata tggcgatgat tgatgtgccg cgcggcaatc ccgagtatgt gcgcctgtcg
      721 ggtatggcgg tgcggttgta ccgttttatg tcccctttag gtttcggtgc ggtcgtgttc
      781 ggcgcggcga taccgtttgc cgccggctgg tggggcagcg gctgggtaca cgtcaaactg
      841 tgtttgggct tgatgctttt ggcttaccag ttgtattgcg gcgtgctgct gcgccgtttt
      901 cagaattaca gcaatacttt ctcacaccgc tggtatcgcg tatttaacga aatccccgtg
      961 ctgctgatgg ttgccgcgct gtatctggtc gtgttcaaac cgttttgacg gagcatctta
     1021 tgccgataga aatcgaacgc cgttttttga ttggaaacga caactggcgg caatacgccg
     1081 atgagccgct gctgttgagg cagggttatc tgtctgttga aaaagaacgc accgtccgtg
     1141 tccgcattgc cggaaaacgg gcgtggctga cgctgaaagg ctatatttcg gaaatcagcc
     1201 gcagtgagtt tgaatacgaa atcccgcttg ccgatgcgga aaagataatg gaaacgatgt
     1261 gcccgtttaa gatggaaaaa cggcgttatc cggtcagatg gaacggcagc ctgtttgaag
     1321 tcgatgtttt ccttggagaa aacgcacctt tggtcgtcgc agaaatcgag ctgcccgacg
     1381 aaaatgccga ttttgaccgt ccggactggc tggggcgcga aatcactgcc gacggtatgt
     1441 ttaccaatgc ttatttgagc aaacatccgt tctcaagctg gaaaaatgcc gtctgaagcg
     1501 gcttcagacg gcattctccg acaaccatcg caaatccaaa gacagcctct atatccttat
     1561 ttctgctttc tttgttccat tattcccaat aaatccccat aacctaaaat ctcgtcattc
     1621 ccgcgcaggc gggaatccgg ttctttaaac ttcggttttt tccgataaat tgctttagct
     1681 tttcgtttcc ggattcccgc ttttgcggga atgacgatgg aagattgttg ttatttcgga
     1741 taaattaccc taactttaaa atcccggatt cccatcttcg ggggaataac aatattttct
     1801 atttcagccc atcatttgcg ggggatttta tagagagttt atatttcaat atctcaaata
     1861 atgcacaaaa gcatagcgcg tgcctttgct gctgacgcgg cgttccgtcc gccctgcctc
     1921 tttccaatgc gtccggtcta tttcggggaa aaacgcatct ccttccacag acaaatccac
     1981 ttcggttatc cgcaaatcgg tcgccaatgg catcgcttgt ctgtatatct gcgcgccgcc
     2041 cataatgacg gcttcttccg cgccggcgca caatgccaat gccgcctcca aacttgccgc
     2101 cgtttccgcg cctgccgcgc aataatccgc ctgccggctg atgacgatgt tcctccgtcc
     2161 gtgcaggggt ttgacgggca gggattccca cgttttccgc cccataatga cgggtttgcc
     2221 caaggtatag gctttgaaaa atgcgaaatc ttcggggatg tgccaaggca tagcattgcc
     2281 cgccccgatg cacaggtttt ccgcatacgc cgcaattagg gttattttga gcatatttcc
     2341 tccacaaaaa tgccgtctga acgcttcaga cggcatttta tgacattccg tgtcaaaaat
     2401 ctcaaccggc gcgctccata cgttttttgt ttgcacctgc caacaatgcc aacagttctt
     2461 cagtcgcgcc ccaaccgata cacgcatcgg taatgctttt gccgtacact tccggcttat
     2521 cctgtctgcc ttcgaccaaa tggctttcca ccatcacgcc cataatattg ctcccgtcct
     2581 gttccaattg ggcagcaata tcttgtgcca cttccatctg ccgggtgtaa tccttgcggc
     2641 tgttggcgtg gctacaatct atcatcagct tatcggttac ccctgccgca cgcagttgtt
     2701 ccgccgcctc gctgacgtgt cccgcatcat aattcggctc ttttccgccg cgcaaaatga
     2761 catgacagtc gggattgccg ccggtatgga caatggcgga atgtccggcc ttggttacag
     2821 acaagaaatg atgcgaatgg ctcgccgcac cgattgcgtc gatggcaatc ttcaaattgc
     2881 catccgtacc gtttttaaag ccgacggggc aggacagccc gcttgccaat tcgcggtgaa
     2941 cttggctttc ggtcgtccgc gcaccgattg ccccccaaga aatcaagtcc gcataatatt
     3001 gcggcgtaat catatccaaa aactcggtag aggcaggcat acccatattg ttcagcgaca
     3061 acaacaggct gcgcgcctga cgcaaaccga aattgatatc gaacgtaccg tccaaatgcg
     3121 ggtcgttaat caaacctttc caacccaccg tcgtcctcgg cttctcgaaa taaacgcgca
     3181 tcacaatcaa aagctcgttt tcatactgct tgcggagttt caacaaacgc tccgcatatt
     3241 ccaacgccgc tttcggatcg tgaatcgaac acggcccgat aataaccaac agccgcttgt
     3301 ccctgccgtg aaccaaatcg gaaatttcct gacgggtgcg gtgaaccaag cccgaagcct
     3361 ctttggaaat cggcagctcg taaagatggg caatcggcgg caacaactct ttaacttctt
     3421 taatcttaat atcgtctgtg gggtaatggt gtgtcatctt gcatctttcc tgatgggttt
     3481 ttatacgcgg cttaggttac atcgtttacc ttgcacaaac aagtgcaaca tattactaca
     3541 aagctatttt atttcaaaat aactgatata tcttttttca tagattttaa atttcatatt
     3601 tttaatattt taggaatttt attccaaaga aaaagaaaca gattgataaa aacaataccc
     3661 gccattcatt cggacaaaac cgcacggaac atccgttttc ccatttccac gacaatccgg
     3721 tacagaacac cccgctgccg attccgcctg cacatccggc aaaatttcat acacaaggaa
     3781 aatgttgaaa acaaaaagaa ctcattgctt gaaaaaagat ttaatgggaa tgcgggtatt
     3841 tcccacactt tttccattta tttatcctca ttataggaag aaaaacatga aaaaaccctg
     3901 cttgcattct cacttgcagc cgtgtccgcc gttacggtag ccgatattcc cgagtctaac
     3961 ggcaaaggca aagccatcat cggcgataag gaaaaacacc gttaccaagc atgaaaacct
     4021 tgctttgaaa gtccatggcg aaatccgcca agatttgggg gacggatgat ccttgacccc
     4081 ttgggcggat gcatatgcag atttgcgcgg caaaaccaaa gtgatgacga cccagatgtg
     4141 tgcttcccgc gatgtcagca aaagcgccga aggttggagt gtcggtatcg gtctgaatgt
     4201 aggcaaacag ttgaccgaca gcgtcggtct cgagtttgat ccatactacc gtcacaaaac
     4261 aatctgcaaa ccccgtgaga ttgttttgga cggcgacaaa accaaaatgg gccgctccaa
     4321 atccaacgag tacggcttcc gcgtaaccgc aacgttctat agtcaattaa aatcaaagta
     4381 ggacagtagt gcatcgtcaa atcgggcgta atcagacaaa acggtttgca gatgcagaac
     4441 gggcggtaac ttccagtaca aaaaacggag cagttctttc tgtacttttt tctttaattt
     4501 gcagtgtgtt atcttcatat ttcgagggta acatatctgc taatctagta cagcccctag
     4561 tttaaagctt tgtttcttaa gtccgcagag tatgccatgg ttagaccttc aaagttgagt
     4621 attgtactat tttgttttta attaactata aaacgcttgt gtgaatagga agactgcaga
     4681 atattgctgc cttttcctgt ttgctttaaa taaacagaaa atgccgtctg aaaccgattt
     4741 tcagacggca tttgtccctt aaaacacgtt ttttcaagcg cgaccatacc aaacacccac
     4801 aggttgcctt ccatccttcg tacaaccttt gctccatcaa acatccactt cctaaatact
     4861 gatgtctgct taggttgaat cggcattcgt acgattacgg cacaccgcct aatctgtacc
     4921 tgcgtctgtt gcgcccaata ccaaaggcca cctgaaaatc tcccaaactt ttcaggtagc
     4981 cttatcacgt tttcgactgt taccacacgc ccaaagagcg cctgaaaccc tttttcagac
     5041 gttccgctcc gatacccccc aacaaaacgc cgcccgaaca catgttcaga cgacattttc
     5101 tttgcgtcga ttcattgcgg tgtttacctg ctttaaggcg gacaaaggtg cggaagcggt
     5161 aaacaacgat acagaacata atgct
//
LOCUS       DAWGBY010000133         5005 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.133, whole genome shotgun sequence.
ACCESSION   DAWGBY010000133 DAWGBY010000000
VERSION     DAWGBY010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.133"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(158..718)
                     /locus_tag="WHG62_001824"
     CDS             complement(158..718)
                     /locus_tag="WHG62_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA large subunit pseudouridine synthase E"
                     /protein_id="HEZ1725890.1"
                     /translation="MKNLIAFNKPYGVICQFSPHEKHKSLKDFINLPGFYPAGRLDTD
                     SEGLLLLTDDGRLQAQITDPKFKHPKTYWAQLEGVPDESRLESLRKGIDLGGFVTRPA
                     SIRILKHGEADSLWERIPPIRVRKTVPDFWIEITISEGKNRQVRRMTAKAGYPCLRLI
                     RVASGRLKLFDLDLKPGEWAYAPFKP"
     gene            847..1038
                     /locus_tag="WHG62_001825"
     CDS             847..1038
                     /locus_tag="WHG62_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725891.1"
                     /translation="MDFQFFVETIRRQEKKLKHGVYRLFEIYSWLEDGKATKARIRYF
                     VKIEVDKQILRRIHRGIAD"
     gene            complement(1234..1428)
                     /locus_tag="WHG62_001826"
     CDS             complement(1234..1428)
                     /locus_tag="WHG62_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ1725892.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(1418..3499)
                     /locus_tag="WHG62_001827"
     CDS             complement(1418..3499)
                     /locus_tag="WHG62_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ1725893.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            3976..4356
                     /locus_tag="WHG62_001828"
     CDS             3976..4356
                     /locus_tag="WHG62_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ1725894.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMSSVQNQARPADF
                     RAFSCENGLSVRVRRLDGGKIALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(4489..4982)
                     /locus_tag="WHG62_001829"
                     /pseudo
     CDS             complement(4489..4982)
                     /locus_tag="WHG62_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
BASE COUNT         1167 a         1200 c         1410 g         1228 t
ORIGIN      
        1 gctcaaagag aacgattgtc taaggtgctg aagcaccgag tgaatcggtt tcgtactatt
       61 tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta taaaattccg
      121 gattcccact tttgtggaaa tgatgagata aacgtgatta tggtttaaac ggggcgtatg
      181 cccattcccc gggttttaaa tccaaatcaa acagtttcag cctgccgctt gccactctga
      241 tcagacgcag gcagggatag cccgccttgg cggtcattcg cctgacttgg cggtttttgc
      301 cctcagaaat ggtaatttca atccaaaaat cgggaacggt tttgcggacg cgtatcggcg
      361 ggatgcgctc ccataacgaa tctgcttctc cgtgtttcaa gatgcggatg cttgccggac
      421 gggtaacgaa accgcctaag tctatccctt ttcttaggct ttccaatcgg ctttcgtcgg
      481 gtacgccctc cagttgtgcc cagtaggttt tggggtgttt gaatttgggg tcggtaattt
      541 gtgcctgaag cctgccgtcg tcggtcagca gcagcagccc ctcgctgtcg gtgtcgagcc
      601 gtccggcggg gtagaagccg ggaagattga taaagtcttt gaggcttttg tgtttttcgt
      661 gcggtgaaaa ttggcagata acgccatagg gtttgttgaa ggcgatgagg tttttcatag
      721 cttttgggtt tgggttgaaa tgggcggcgg tatcgggaaa atttgtttat tgcgaaggga
      781 catccgataa atggtgcttc caaagtgaaa aggtttgaat gcagattaaa ttttaaggtg
      841 catgaaatgg attttcaatt ctttgtcgaa acaatccgcc gacaggaaaa gaaactgaag
      901 catggcgtgt accggctgtt tgagatttac agttggttgg aagatggaaa agcaacaaag
      961 gcgcgtatcc ggtattttgt caaaattgag gtcgataaac agatattgcg aaggattcat
     1021 cgtggtatag cggattaaca aaaaccggta cgtcgttgtc tcgccttggc tcaaagagaa
     1081 cgattctcta aggtgctgaa gcaccaagtg aatcggtttc gtactatttg tactgtctgc
     1141 ggcttcgtcg ccttgtcctg atttttgtta atccactata ttataaaaat tccgtctgaa
     1201 gcggcgttca gacggaattt gtttcaagca ggcttaacag cagcgtccgc cgtttgcgcc
     1261 gcagcggcgt ttgcggcaat agtcttgaaa ctgcagcttg gtcatcacag gggcgttggg
     1321 attatgtttg cgctgctgtg caacgtagtt ttcataatcg ggcacgcctg ccatcaagtt
     1381 tgccgtcagc ttgatggttt tccaccaaga cgcgagctta tgcttcactt tgtgcctccg
     1441 gctgtttgcc gtcgcggtac accgccggga tttctttggc ggtcggccag ccgactttgc
     1501 gtgctttgag ggcggtacgc aaaccgtacg cggcgacaat cacgacaacc gacaagaaga
     1561 ggatggtcag accggcatta atcttgtcgt tgaagatgat ttgcgccatt tcgccgatgt
     1621 ctttggcagg cgcaaggact tcgtttttag ccaatgcgtc gctgtatttg ccggcgtggg
     1681 caaggaagct gatgcgcggg tcgctgtgga acagtttttg caggccggcg tagcaggtta
     1741 cgaacagtac gccgacggcg ggaacgagta ccacccagac ataacggtcg cgtttcatct
     1801 taatcagcac cacggcgcac ataatcaagg ctacgcctgc cagcatttgg ttggcgatgc
     1861 cgaacaaagg ccagagcgag ttgatgccgc ccagcgggtc ggttacgccg gtgtagagaa
     1921 agtagcccca caatgccacg gcgaagaagg tcgcaatcag gttggcgggg atggagtcgg
     1981 tgttgccgaa aggtttgtag aagatgctgc ccaagtcttg aatcataaaa cgtgcgacgc
     2041 gcgtaccggc atcgacggcg gtcaggatga acaaggcttc aaacaatagg gcgaagtgat
     2101 accagaacgc catcatcgcc tcgcccggaa tcaggcggct cataatgtgc gccataccga
     2161 ctgcgagggt gggcgcaccg cctgcacggg aaaggatggt gttttcgccc acttccttag
     2221 cggtgtgcaa cagggttgca gcatcgacag ggaattgcag cttggtggta atcacttcgg
     2281 cggcggtatt ggcatccgta ccgatcaggg cggcagggct gttcatggcg aagtacacgc
     2341 cgggatcaag cgatgcggcg gcggcaagtg ccataatggc tacgaaactt tccatcaaca
     2401 taccgccgta accaatcata cggacgtggg tttcgttttc cagcattttc ggcgtggtgc
     2461 cggaggaaat cagcgcgtgg aagcccgaaa ccgcaccgca ggcgatggtg atgaagagga
     2521 acgggaacaa tgcgcctgag aataccgggc cggaaccgtc gataaagtgg gttacggcag
     2581 gcatttgcaa agtgggattg acgatgacga tgcccaaagc caaggccgca atcgtaccga
     2641 ttttcaggaa ggtggagaga tagtcgcgcg gagtgagcag cagccatacg ggcaatacgg
     2701 aggcgacaaa gccgtaaatc ataatcgccc aagtgagctg gatgccgtca aggtcgaacc
     2761 aatgtccgat ggaacttttc gccacatctt cgccgtaaat taccgccagc atcagcaaaa
     2821 taaagccgac gatggaaatc tcgccgattt tgcccggacg gatatagcgc gtgtaaatac
     2881 ccataaacag ggcaatcggc atcgttgcgg cgatggtaaa cgtaccccaa gggctgtgaa
     2941 ccagtgcttt tacgacaatc aacgccaaca ccgccataat gatgaccata atcatcaaaa
     3001 taccgatgga ggcaatcacg ccggggacag tgccgagttc ctgtttcaca atatcgccca
     3061 aagacttacc gtcgcggcgc atagagacga acaagaccat catatcctgt accgcgccgg
     3121 caaacaccac gccgaagata atccacaaag taccgggcag gtaacccatt tgcgccgcca
     3181 aaaccgggcc gaccaaaggg cccgcgcccg caatcgcggc aaagtggtgt ccgaacaata
     3241 cgcctttgtg cgtcggaacg tagtccaagc cgtcgttgtg gcgttctgcc ggagtcaggc
     3301 ggttaggatc gagccgcatt acgcggttgg cgatgtagag gctgtaaaaa cggtaggcga
     3361 tgcagtaaac ggatatggcg gcggtaacca tccataccgc gctgacctgt tcgcctcggc
     3421 tgagagccag agtggtaaag gatgctaagc cgaccagtac cactatgccc caaatgagga
     3481 aggttttgag tgatttcatc gaataaatcc ttatctcaca ctgtcggaat atgcctgaac
     3541 ggcgggaaac ggccgaacca tctgccggca cgggcacaaa ccggagtctg aatgattgac
     3601 gaagtatgaa acagtgcgct tgtcgggatt tgtgccttat gcccgcatca aacagtgcag
     3661 ggatgcgggc gcacaaaacg ttaaacgccg aataggattt taacgcaaat tagcacactg
     3721 atagcggttt ttacttggaa tttggaaaaa atttacattc cttcgggcgg acaggcgggt
     3781 ttggacggca tcgtcaggca aaaggcggcg ccggaagacc ggtaaagaag gggcgcgcaa
     3841 tccggattat tgattcatcg cgggtaaatt ccggttatcg ggcttgtgtg tttgcgcgtc
     3901 cgtttatagt atggcgttgc cgcagcttgg aatcagggcg gttgtttcat atcttatttt
     3961 tattggggag cttttatgaa tatcaggttt ttcgcgctga ccgtaccggt tttgtctttg
     4021 gcggcctgtg ccgtgccgga ggcgtatgat gacggcggac gagggcatat gtcgtccgtt
     4081 caaaaccaag cccgcccggc agattttcgg gcgttttcat gcgagaacgg tttgtctgtg
     4141 cgcgtccgcc gtttggacgg tggcaaaatc gcgttgcggc tggacggcag gcgtgccgtc
     4201 ctctcttccg acgttgccgc atccggcgaa cgctataccg ccgaacacgg tttgtttgga
     4261 aacggaaccg agtggcacca gaaaggcggc gaagcctttt tcggctttac cgatgcctac
     4321 ggcaattcgg tcgaaacttc ctgccgcgcc cgttaaacgg ggcagcctgt ttgaaccgcc
     4381 gtccggattt ttcgggcggt tttttgtgtc ggatttgttt tggctgtcgg ctggtttcgg
     4441 cggttttcgg gcgtggcgga ttatttttcg tttcgttccg ggtttatcct atcggcagcg
     4501 gctcaatgcc aactttaaac ctgctccgat ttcttcaggg ctgttatcca atgataaaat
     4561 gacatcgtct gcatcaatgg catcccacgc ttccagcttg acatggcggc tcgggctgat
     4621 tttcaggcag ccgttgtgca gccaaatatc cccgctcatc atgtttttaa atagggcgcg
     4681 tctggtttta tagcccaagt tcccgcatag tttggcaacc caatcctcat agcgttgccg
     4741 aaatttttcg gtatcaaaaa aatcttggtc ttccgaactg tcataaacga aagtcctgct
     4801 gtttgccaac gcttgcaaga ccgtcgtgcc taaagtttca ttgtcggtat ccaatggcag
     4861 gatatggggg gatataggtg gtctattgcc gttaacccca aacctgaaca tgtttgaaca
     4921 atcagagctt cttcattagc ataaaaaact gcccaataat tttgatcctg tttaaaaatt
     4981 attatttgat ctccgtaatt ttgat
//
LOCUS       DAWGBY010000134         4831 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.134, whole genome shotgun sequence.
ACCESSION   DAWGBY010000134 DAWGBY010000000
VERSION     DAWGBY010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4831
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.134"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(92..574)
                     /locus_tag="WHG62_001830"
     CDS             complement(92..574)
                     /locus_tag="WHG62_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ1725895.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(727..888)
                     /locus_tag="WHG62_001831"
     CDS             complement(727..888)
                     /locus_tag="WHG62_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725896.1"
                     /translation="MSGQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWAGVLALVF
                     FLVFRFWLS"
     gene            complement(962..1423)
                     /gene="recX"
                     /locus_tag="WHG62_001832"
     CDS             complement(962..1423)
                     /gene="recX"
                     /locus_tag="WHG62_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ1725897.1"
                     /translation="MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKLAA
                     IAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            complement(1491..2198)
                     /locus_tag="WHG62_001833"
     CDS             complement(1491..2198)
                     /locus_tag="WHG62_001833"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ1725898.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETA
                     TGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKEE"
     gene            2605..3870
                     /locus_tag="WHG62_001834"
     CDS             2605..3870
                     /locus_tag="WHG62_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003420866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEZ1725899.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGITLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNE
                     AGYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIHRVEKAMKLRGWY"
     gene            complement(3928..4734)
                     /locus_tag="WHG62_001835"
     CDS             complement(3928..4734)
                     /locus_tag="WHG62_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ1725900.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
BASE COUNT         1035 a         1105 c         1425 g         1266 t
ORIGIN      
        1 aatttaatcc actatatttg cttgatttca tccgtttgca atggaaacgg atggcgcgat
       61 gtgcctgtct ttcagacggc atagtccgcc gtcagcagcc gcaggacatg tcttcagagg
      121 cttgcaggct gatgtctctg cgttttttgg ctttttcgta gcggcagcgt tggcggtcgg
      181 tcaggatttc cagcggaggg acagggacgg gtttgccgtc tttgaccgca accatcgtga
      241 agtagcagct gttggtatgg cggatttcgc cggtgcggat gttttgtgct tcgacacgga
      301 tgccgatttc catcgaggtg cgtcccgtgt agttgacagc ggcgtaaaag gtaaccaaat
      361 cgccgatgtg gatgggttct ttaaacagga ctttgtcaac cgacagggta acgcaataat
      421 tgccgctgta acggctggcg caggaatagg cgacttggtc gagcaggagc aggagttcgc
      481 cgccgtgtac gttgccgctg aaattggcgg tgtccggcat catcagttcg gacataatga
      541 gttcgtggga aggcagttgg cgttgttgtg tcatagtgta cctgttttaa gaaagggtgt
      601 tttgaaatgg gtgcggggaa attttaggga atggggaagt ggaattcaag ctaaaaaaag
      661 ctatgatggg atagtctgcc gaaatggacc gccgatgccg tctgaagcct tcagacggca
      721 ttttgtttag gaaagccaaa aacggaagac caggaaaaac acgagtgcca atacgcccgc
      781 ccaaacgacg agcatgaatc cagcaactgc ccgtcccata cggtaaaccg ggtttttgcg
      841 ttcgtcttcg atgggggagg tgtggtgttt ttcgggttgt ccggacattt tgttctcaat
      901 cggaaaagtt ggaaacgggc gtaaggttat gttgccgtgc aaaaagattc aagaaggaag
      961 gtcagcagcc gtcttcccaa ttttcgtccc aagcgtgttt caatgccgtc tgaacggtat
     1021 cggcatcgaa tccgcgatag gcgaggaaac gcgcctgttt ttgtttttct ttgaggtcgg
     1081 cggcggggtg tttgaatttt ttacgcaaca cggctatggc ggccagtttt tcgcttgagc
     1141 ggtcgggaag caggttgcgg ctggtttctt catctatgcc ctgttgcgcc aaagcctgtt
     1201 tcagcctcaa tgaaccgtgt ttgcggcttt tgctgcggat ataggcttcg gcatagcgca
     1261 aatccgactg ccagttgcgt tcggcaaatt cgtttaacac gttttccaac tcctcttcgc
     1321 tttcggcgtg cggtgcaagt ttgcgtttca gaccgatgcg gctgagttct tggcgcgaga
     1381 ggatgtccat cgcgcgggcg cgtagggatt tttgcggttt catggcggcg gtttcggcgt
     1441 ggggcaggtt tcagacggca tagcggcgca aaccggagcc gtccgaatgc ctactcttct
     1501 ttgtttttct gaggttgcag gttttcgtaa atttcgggca gcgagccgat aatccagtcg
     1561 gggcgggtcg catcgtcttg cgagagcagc gtcatatcgc cgtaaccgaa ggtaacgccg
     1621 acgctcaggc agccggcggc tttggcggcg atgatgtcgt tgcgcgagtc gccgaccata
     1681 accatgtttg caacatcgat acccaaaact tcggcggcgt gccgcagcgg cagggggctg
     1741 ggttttttct cgggcaggct gtcgccgccg agtatcaggc tgaagtagtc ggcaagtccg
     1801 agctgtttca acagttcgac ggcaaggatt tcgtttttat tggtaatgac tgccagcggg
     1861 atgcccaaag atttgagcaa tgccagcccg gttgcggttt cgggataggg gcgggtgaag
     1921 acgctcaaat ggtcgcggta gtatttcata taggatacga aacctttttc ccacagttcg
     1981 gaatcggctt cgcggtcgcg gtcgttggtg aggacgcggt gaaccagttt gccgatgccg
     2041 tcgcccacat agctttcgac cactttggcg ggcagcggtt tcataccgag ttgttccaac
     2101 atcgcttctg cggcggcggc aaggtcgggg acggaatcgc acagtgtgcc gtccaaatcg
     2161 aaggcgacgg cttggacgtg ttcgatggct gcattcataa tctgatttcc tgtcgggttg
     2221 aaagggttta ttttaacatc gtttgcacag ggcttctaat gtatagattg ttaacaatcg
     2281 caacaggttt tgcaggcggt gttttcggat ttcggggcgg aatcgggcaa gggtttgaaa
     2341 tcccagcgat gttccaatta aatttttaaa aaataaaagg atgcctatat ctttatttaa
     2401 tttgacattt atttttcgga tgcgcgcgct gctttttcag gcggagtccg ggctgattcc
     2461 gtgcggcttg aaaaataaaa tcatatatag attaatcaaa tcgggcttat gccgactaca
     2521 cgctattaca ttttgtcggg aaattggtta tagtaatgag cgaaatgcac gcccctgaaa
     2581 atctttttgt gaaaaggaag caaaatgtct gaagcccttg caaaagaaac cctcaatccg
     2641 tttgaaatcg cgcgcaaaca ggtcaaaacc gcctgcgacc ggctgaaaac cgatccggcc
     2701 gtttatgaaa tcctgaagag tccgacccgc gtgttggaag tcaatttccc cgtcaaactc
     2761 gacgacggca cggtcaaaac cttcacgggc taccgttcgc aacacaacaa cgccgtcggc
     2821 ccctataaag gcggcgtgcg cttccatccc ggtgtgaatc tggacgaagt caaagccttg
     2881 tcaatttgga tgaccatcaa atgctgcgtt gcgggtattc cttatggcgg cggcaaaggc
     2941 ggcattacct tggatccgcg cgattattcc gaggcggaac tggaacgcat cgcccgcgct
     3001 tattccgaag ccatttctcc gctgatcggc gagaaaatcg atattcccgc ccccgatgtg
     3061 aacaccaacg gcaaaatcat gtcttggatg gttgatgcct atgaaaacgt ggtgaaacat
     3121 tctgcaccgg gcgtatttac cggtaaaccg gttgagttcg gcggctcttt ggcgcgtacc
     3181 gaagccacgg gttacggcgt gaacctcgcc gccgtccaag ccttggaaaa actgggcaaa
     3241 gacgtgaagg gtgccactta cgccattcaa ggtttcggta atgtgggtta ccacacaggt
     3301 tattacgcgc atcaatccgg cgcgaaagtt gttgcggttt ctactgtcga tgttgccatt
     3361 tacaacgaaa acggtttgga tatggaagcc ctgttcaaag agttccaaga aaaaggcttc
     3421 atcaccaacg aagccggtta cggcaaggaa attaccaacg ccgaactttt ggctttggat
     3481 gtggacgtac tcgccccttg cgcgctggaa aaccaactga cttccgaaaa cgccggtaaa
     3541 gtccgcgcga aaatcgtggt cgaaggcgcg aacggtccga ctacgcccga agccgacgtt
     3601 atcctgcgtc aaaacggcgt attggtcgtg cccgatattc tggcgaactg cggcggcgtg
     3661 gtcgtttcct atttcgagtg ggtgcaaaac ctgcaaggct attattggga gtttgacgaa
     3721 gttcaggaaa aagaaaccgt cgtcctgcgc cgtgcgttcc gcgatatatg gaacttggct
     3781 caagagtatg atgtcgattt gcgaaccgcg tcttacatga tgagtatcca ccgtgttgaa
     3841 aaagcgatga aactgcgcgg ttggtattga tgtttgaaca aaaaatgccg tctgaagcct
     3901 tcagacggca tttttgtgcg ggcgggatta atggtgcgaa tggccgattt ggaaggttaa
     3961 agtcgagtag ttcgcctgtt tttggcacac gctttgatcg gggaagtcgg ctttgtgttc
     4021 gacattggct ttccagaagc cttggcgcaa ggggatgatg tccacttcgc ctttgtcgtc
     4081 tgtgctgtcg gagaaagcct gtgcttcggt tttgtgcgtt ttgctgcggt cgctggtgtc
     4141 gaagccgtca aaggtggcgg taacggtggc attgggcagc ggttcgccac ggaacagaac
     4201 gcggactttg aagcgttcgc ctacgtgaat gttggcggga ttgtccagcg ggacgatttc
     4261 caagttttgt ccgaccggtt tggtgatgat ggcggtgtcc gcgctttcgt gtccgacgtt
     4321 gacgatgttt ttgccgaaca ttcgggtttg ttcgcaatag cttgcgtcag gcatttcttt
     4381 gatgcccgcc tgtttccagc ctgctttgtt ttttgaccag aaagtaggct gatattcggc
     4441 gatgacgagg taactgccgt ccttaacggg acggttgctt cggtactggt agttgtatgt
     4501 gccgcgttga atcatgtttt ccttgccttt ttcggtaacc agctgcatcg gtttgctgaa
     4561 gatgtgcagg cggtctttgg cgatgggttc gagttcggga aattcgccgt agcccaagtc
     4621 ggctttaagg tattcgccgc cgtgcgtgtg ggcggtttcg acccagacgc ggtgggcgtg
     4681 ggcggatgtg gcaaataggg cggaaacggc gagcagtgtc aatgttttct tcatggtgca
     4741 gcctttgtct cgtgtgggtc aaagattttg ttatgttata acaaaatagg tatcgtgtga
     4801 agacggattt gctgtctgaa aactgtcttt t
//
LOCUS       DAWGBY010000135         4768 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.135, whole genome shotgun sequence.
ACCESSION   DAWGBY010000135 DAWGBY010000000
VERSION     DAWGBY010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4768
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.135"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(71..454)
                     /locus_tag="WHG62_001836"
     CDS             complement(71..454)
                     /locus_tag="WHG62_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725901.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            complement(459..977)
                     /locus_tag="WHG62_001837"
     CDS             complement(459..977)
                     /locus_tag="WHG62_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase"
                     /protein_id="HEZ1725902.1"
                     /translation="MVAGTVSAQAAISAKPAPVTRYLSNDSAPALRQALTAESQRIRM
                     KLPEEYRQIGNLAIAKIDVKGLPQRMEAFSSFQKGEHGFISLPETKIFKPISVDKYHN
                     IASPPRGTLRNIDGEYKLLETIAQQLGNNRNVSGRIDLFTELKACQSCSNVILEFRNR
                     YPNIQLNIFTGK"
     gene            complement(1606..2001)
                     /locus_tag="WHG62_001838"
     CDS             complement(1606..2001)
                     /locus_tag="WHG62_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725903.1"
                     /translation="MNQFCLSEYEKAFLCRIIENNMIWKEYLIEQIENSIIVSRDNTG
                     CGCYIDFQVNLERTNLNKYENIPIFFEGDITAPDKSDAATFLLYTTESLNKAGRIIDF
                     LEVAIAGTNYDEVEVYSWLKMENSLRFGL"
     gene            complement(2013..2726)
                     /locus_tag="WHG62_001839"
                     /pseudo
     CDS             complement(2013..2726)
                     /locus_tag="WHG62_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236085.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
     gene            complement(2822..3094)
                     /locus_tag="WHG62_001840"
     CDS             complement(2822..3094)
                     /locus_tag="WHG62_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725904.1"
                     /translation="MNKRMKMCPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGMNI
                     FYGEYEKDFYSYVPFMESQGITSECIWEGDLFDHPYYEDENSNDMD"
     gene            complement(3282..3770)
                     /locus_tag="WHG62_001841"
     CDS             complement(3282..3770)
                     /locus_tag="WHG62_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725905.1"
                     /translation="MKKDIFYCEQWSYGYKRLHKPFSEKQAEEKHLKGELYTAVIGSA
                     TQPEYVITLREEVGFFSVNFFDKFGRDYLTHQFQKYSNSNYYFLSTAVWRDYITLESH
                     DLAEGYTYFFNENTDDCYVLKQDFINNERYEKTELYPQKDKVILFPKFGEYDLVLNPD
                     II"
     gene            complement(3767..>4768)
                     /locus_tag="WHG62_001842"
     CDS             complement(3767..>4768)
                     /locus_tag="WHG62_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ1725906.1"
                     /translation="LGDAALGAIVSTVHGEVASKIKFNLSEDYIAHKIAHAVAGCASA
                     VANKGKCRDGAIGAAVGEMVGETLLDGRDVGKLSPQERQKVIAYSQIIAGSAVALVKG
                     DVNTAANAATVAVENNSLLARRRVNIRWTPRQELEHEYAILEIQAITNQIRRLDPKFN
                     GIAILRNPREPWTRHDVQTYRQYYNQLRESRGFAVEPIYRIRINNGNEFNRIMSSKYP
                     YNELYVANPKSATGYFRVDSYDPATREIISRKFTQFSQIQESTGIGYIKEAVRKYSPG
                     TVISNVPSTPTTIRGRELEGKLILEVPAQVNPIPQSVLRAAQEENVIIRDTTGRIYK"
BASE COUNT         1368 a          997 c          776 g         1627 t
ORIGIN      
        1 cggtataaaa gtatttttag tgatttactg tttttggtat ttttgcccga cggggttaaa
       61 aatacagttg ctactcttgc tgcatgatat tggcaagatt taatttaaat gtttgttgaa
      121 tcttgtttac atccttagca aaaatatgat agtcactcga agaatagata gattttattc
      181 tatccaaatt agtttgttga taacattttt tcatttccgc gatgaaaaaa ttatcttttc
      241 ctctttcatt gagacagtta ttttctaaca gatagattgc ccatgctgta aaaataaatg
      301 tactatcttc cggatattca gataaataaa tttcgaattc aattatagaa tattcagctg
      361 cttcaattaa tgttatatct aaatctctga caaatttttc cgttatattt ttaaataatt
      421 tcttgaattc tatataattt tttatttttt ccatgattct attttcctgt aaaaatattt
      481 aattgaatat ttggatagcg atttctaaac tctaaaataa cattgctgca agattgacag
      541 gcctttaatt ctgtaaatag atcaattcta cctgatacat tacgattatt tccgagttgc
      601 tgtgctatag tttcaagtaa tttatattct ccatctatat ttcttaatgt tcctctagga
      661 ggagaggcaa tattatgata tttatcaaca gatataggtt taaaaatttt tgtttcaggt
      721 aacgaaataa atccatgttc ccctttttgg aaagaactaa atgcttccat cctttgcggt
      781 aatcctttaa catcaatttt tgctatcgca agattcccta tttgtcgata ctcttccggc
      841 agtttcatgc ggattctctg gctttcagca gttaaagctt gtcttaaagc aggagcactg
      901 tcattgctca gataacgggt aacaggtgca ggcttggccg atattgcagc ctgtgcagat
      961 acagttcctg caaccatcaa tgtgccatta acaacctgaa ctgtaccatg cagatattct
     1021 ccattagaga ttgctttcgc tccctgtcca atgttatatc ctcctgctgc cacagtagct
     1081 gctttgacac tgaagccaag cggtccgttt aataagtaaa gtgcaggttg tgcggcaaca
     1141 gctgatttgt aatcaaaaga atcataacga ctcaatgttt gataggcttt cgataaggtg
     1201 ttattaatat ctttggaagg aatagtgaga ttacccattg actggggcgt tttcagtatc
     1261 gaagctgccc aagctgtgtt acctccagag gcttggttaa taaaatatgt tacctatgta
     1321 tattgtttct tcaaaaatca accgtattgt ccttgggtga ttttcgtacc agcacaatca
     1381 gtctgcccta gttgacagat cgcgccacac tagccagata cagcgtatca ttggtaaaac
     1441 tgataatgcg gcaatataaa gaaaaacttc aatagtatgt taacgaaatt tgacgcataa
     1501 aaatacgcta aaaaattttc gcttgactaa ttaaaaatgg gattgagcat aaaattttaa
     1561 taatttatat tattgaaaat atctcagatt ttcagtcagt ttattttaca agccgaaccg
     1621 taggctattt tccatcttta accatgaata gacctcaact tcatcataat ttgtgcctgc
     1681 aatagcaact tccagaaagt caataattct acctgcttta ttcaaagact ctgtagtata
     1741 tagcaggaaa gtcgctgcat ctgacttatc cggtgcagtg atgtctcctt caaaaaaaat
     1801 agggatattt tcgtatttat ttagattagt tctttctaaa tttacctgaa aatcaatgta
     1861 gcacccacat cctgtattat ctctagatac tattattgaa ttttctattt gctctattaa
     1921 atattccttc catatcatat tgttttcaat aattctacat aagaaagcct tctcatattc
     1981 agataaacaa aactggttca tatattctac ccttacattt tcaaaatagt tgcaatacga
     2041 gatactccat tgttgacata tacgcgaaca attaccgtta taccattgac cgttacagta
     2101 actggataat ttcctgtttt tgtcagtttt aaagcatcca ctgccttttg cgtcgctaca
     2161 acagcatttt ccatggagcc tgatttttga atcaatgtat taccgatgct tccttgatgc
     2221 cccttaaaga tgtgatgaac tttatttagc caatctacac cgtatctttc agccaatagt
     2281 cgagaattac tttcacctat tttttccatc gaagctaaaa tcctttgagc ataggcagca
     2341 tcagctgttg aaaaatttgc ttcgcccaac aaaagccgta attcctgaat atctcctcgt
     2401 aaaattgcat ttcttactcc cgcttctaat gtggtttgtg gctgaaagag ggaattattc
     2461 tctaccgcca cagtagccgc attcgccgct gtattcacat ccccgcctac aacggcagac
     2521 gcagtgccgg caaccagttt tgaataggca gtaatcttcg ctttagattt tttgatttcg
     2581 gtcgcactca tacgactgaa atcagtattc ttaaccaaag cctcaccaac aatctcaccg
     2641 actgcagcgc ctatcgcacc atcctgacac ttgcccttat tcgctgccgc tgccgcacag
     2701 cccgctatgg catgggcaat cttgtgggtg gtatatcgct gccagccctc tctgttgata
     2761 atcttgcgta tgattacgcc gtttgatggc taatcgtacc tacgcaggct taaaatttcc
     2821 atcaatccat atcatttgag ttttcatctt cataatatgg atgatcaaac aaatctcctt
     2881 cccaaataca ttcactcgtt ataccttggg attccatgaa aggaacataa gaataaaaat
     2941 ctttttcata ttctccataa aatatattca tacctttgag ccatactgca tcgcattcat
     3001 cacacagaat aatttcatca tgaagatatt taggtttcga atggtagaga tagccttgtt
     3061 gacaagcagg acacattttc attctcttat tcatgattat tccatataat caatttattt
     3121 ttgtgggtaa gcaatagtga tttgattgct gcctttagtc tgtacaacaa tacgtatata
     3181 gcaatctgat aatttcctgg tttttatcag ctttatcctc agattccaaa cccaataata
     3241 aaagccgttt gaaatttttt tcagacggcc ttaaaactca attaaataat gtccggattt
     3301 aacaccaaat catattcgcc aaactttgga aatagaatta ccttatcttt ttggggatat
     3361 aattctgttt tttcatatcg ctcattatta ataaaatctt gtttcaaaac atagcaatca
     3421 tccgtatttt cattgaagaa ataagtatat ccttctgcta agtcatgaga ttccaaagtt
     3481 atataatctc tccatacagc cgtagaaaga aaataataat tcgaattgga atatttttga
     3541 aattgatggg ttaaataatc ccttccaaat ttatcgaaaa aatttaccga aaaaaaacct
     3601 acttcctctc gcaaggtaat tacatattca ggttgtgtcg ccgaacctat tacggcagta
     3661 tataactccc ctttaagatg tttttcctca gcttgtttct cagaaaaagg cttatgaagt
     3721 ctcttataac cataagacca ctgctcacaa taaaaaatat ctttcttcat ttgtaaatcc
     3781 ttcctgttgt atctctaatg ataacatttt cttcttgtgc cgcccttaat acagattgtg
     3841 gaattggatt gacctgagca ggaacttcta aaataagttt tccttcaagc tctcttcctc
     3901 ttatcgtagt aggtgtactt ggaacattgg aaatgacagt accagggcta tattttctaa
     3961 cagcctcctt gatataacca atccccgtac tttcttggat ttgagaaaat tgggtaaatt
     4021 ttcttgaaat aatttccctt gtcgcaggat catacgaatc taccctaaaa taccccgtcg
     4081 ccgatttagg attggctaca taaagctcat tataagggta ttttgatgac atgatacggt
     4141 taaattcatt gccgttgttt atcctgattc tataaattgg ttcaacagca aagcctctgg
     4201 attcccttaa ttgattataa tattgcctgt atgtttgtac atcatgtctt gtccacggct
     4261 ctctaggatt cctcagaata gcaatcccgt taaatttcgg atccagcctt cggatttgat
     4321 tggtaatggc ctggatttca agaatggcat attcatgttc caattcttgt cgcggagtcc
     4381 aacgtatatt taccctcctg cgagctaaaa gactattatt ctccactgcc acagtagccg
     4441 cattcgccgc cgtattcaca tcccctttaa ccaatgccac tgcgctgcct gcgataatct
     4501 gcgagtaggc tatgactttt tggcgttctt ggggtgacag tttgcctaca tcgcgtccgt
     4561 ccaacagggt ttctcccacc atctcgccga ctgccgcgcc gattgcgccg tcccgacatt
     4621 tgcctttatt tgctaccgcc gatgcacagc ctgctacggc atgggctatc ttgtgggcaa
     4681 tgtagtcttc gctgagatta aatttgattt tgctcgctac ttctccgtgt acggtactga
     4741 ctatcgcacc cagtgcggca tcgcccaa
//
LOCUS       DAWGBY010000136         4649 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.136, whole genome shotgun sequence.
ACCESSION   DAWGBY010000136 DAWGBY010000000
VERSION     DAWGBY010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4649
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.136"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            42..158
                     /locus_tag="WHG62_001843"
                     /pseudo
     CDS             42..158
                     /locus_tag="WHG62_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(309..1352)
                     /locus_tag="WHG62_001844"
     CDS             complement(309..1352)
                     /locus_tag="WHG62_001844"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ1725907.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMPHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGAIPLLP"
     gene            complement(1349..1630)
                     /locus_tag="WHG62_001845"
     CDS             complement(1349..1630)
                     /locus_tag="WHG62_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725908.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQRSDGIPANHTKEKP"
     gene            1939..3039
                     /locus_tag="WHG62_001846"
     CDS             1939..3039
                     /locus_tag="WHG62_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ1725909.1"
                     /translation="MYQKPKLFKGAVRNLEAASWKDINEIYQRADPTAPLFYLRKKGA
                     IVPKEEYVESFDALGKTRYRFIKSVIYEHMKNGASLVYNHINNEPFSDHISRQVARLA
                     GAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQLTAPDFPMPLYMQQTKDTD
                     ISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLAVGTFPPNGYNYLEWLMKK
                     FPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEAFSEDFLGKERTDTAFHLE
                     QFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISVDELGKKVLEHIGKNEPLL
                     LKNLLVNFNQGKYEEVRKLIYQLIELDFLEIL"
     gene            3268..3621
                     /locus_tag="WHG62_001847"
     CDS             3268..3621
                     /locus_tag="WHG62_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725910.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRDWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            3682..4308
                     /locus_tag="WHG62_001848"
                     /pseudo
     CDS             3682..4308
                     /locus_tag="WHG62_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246842.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
     gene            4260..4460
                     /locus_tag="WHG62_001849"
     CDS             4260..4460
                     /locus_tag="WHG62_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725911.1"
                     /translation="MVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADI
                     LHEKRRLYEWVLEPIYSISGKL"
BASE COUNT         1270 a         1038 c         1193 g         1148 t
ORIGIN      
        1 gacgaaattg aagcgtgcgg aaatgtgtcg gaaatcgctg aagccggata aactatagtg
       61 gattaaattt aaatcaggac aaggcgacga agccgcagac agtacagata gtacggcaag
      121 gcgaggcaac gctgtactgg tttaaattta atccactata gattcccgct tttgcgggaa
      181 tgacggtatt ttagattttt gttttcgcgg aataatgagc ccaaagccgt ccgaaccaaa
      241 aaaaaccgcc gctttcagac ggcatcaaaa aaccgcaggc acgatgcctg cggtttgccg
      301 tttgcgcttc aggggagcag ggggattgcg cccaagccgt gtgtttcttt cagtccgaac
      361 atgatgttca tattttgcac cgcctgaccc gccgcgcctt tgacgaggtt gtcgatgacg
      421 gaaaggacga cccacacatc ggattgcgcc gcctgttgga tgctgatgcg gcagaggttt
      481 gcgccgcgca cgctgcgggt ttctggtgtc gaaccggcgg gcaggatgtc cacgaacagg
      541 ctgtcgcggt aatagtcgcg caggatggtt tcggggcaga tgccgtctga aaggtggagg
      601 taaacggtgg cgtgcatacc gcgtatcatc ggcgcgaggt gcggcgtgaa cacgaatcct
      661 tcggcgatgc cgtcctgaag cccggcgatg gtctgcctga tttcgggcag gtggcggtgt
      721 ccggctatgc cgtaggcttt gaagttgtcg ccgacttcgc acaacagcga accgacattg
      781 cctttcctgc ccgcgccgga cacgccggat ttgcagtcgg caatcagcgg cataccgggc
      841 ttcagacggc attgccgcaa cagcggcacg agcggcaggg atacgcaggt cgggtagcag
      901 ccggggttgg cgacgaggcg cgcctgtgcg acggcttcgc ggttgagttc gctcaatccg
      961 tacacggctt gggaaacgag gccgggggcg gcgtggggca tgccgtacca gtgttcccag
     1021 gtcggaatgt cccatatgcg gaagtcggcg gaaaggtcga tgacgcgcac gccctgttca
     1081 atcaggcgcg gcgcgtcttt catggcgatg ccgttgggcg tggcgaagaa gacgatgtcg
     1141 cattgttcca aacctgcctc gtcgggcgtt tggaaggcga ggccgtacac gccgcgcaaa
     1201 ctcggaaagt aatcggcaac tgcggttccc gcttcgctgc ggctggttac ggcggcgact
     1261 tcgacatcgg gatgggcggc aagcaggcgc agcagttcca cgccggtgta gcccgtcgcg
     1321 ccgacaatgc cgactttgat ttttttactc atggtttttc ctttgtgtgg ttggcgggta
     1381 tgccgtccga acgctgtccg acggggtttt gattggcggc ggaaggacgg tacacaaagc
     1441 gtttgaaaag cgtgtctaat ttaatggcat ccgcctctgt ttttaaaacc cagccctgcc
     1501 gtccggaata aacataaccg taggcgcgaa agccggcagg atatttcggt gcctgcccca
     1561 aacccaaacc gtatgcggcg aaagcggtgg tcgtggagaa ggaaagcagg aggaggacga
     1621 gggttttcat aaggttccaa accgaacggg gcgatgaagc ccgattatag caaaaggtcg
     1681 tctgaaaacc gttttcagac gaccttttat ttaattacaa taaaaatgtt aacaacaaaa
     1741 aacaaaccgc ttttttccgt ttggagacaa atttttaact aaaattgtca acaattcctt
     1801 gacgcacaca caaaaaaaac tttaatattt gtaaatatat gtaacattat aaattttaaa
     1861 tattttctga gtaaggggaa gtaatgagca tccatctcga cttcggcatt agtcctaaaa
     1921 cgttccgaca gacttaatct gtatcaaaag cccaagctct ttaaaggagc ggttcggaat
     1981 ctcgaagccg catcttggaa agatatcaac gagatatacc aacgagcaga cccaaccgca
     2041 ccgctgtttt atctgcgtaa aaaaggtgca attgttccta aagaagaata cgtcgaaagt
     2101 ttcgacgctt tgggcaaaac tcgctaccgt tttattaaat ccgttatcta cgaacatatg
     2161 aagaatggtg cgtcgttagt ctataaccat attaacaacg agccgttttc agatcatatt
     2221 tcccgtcaag tcgcccgcct tgccggcgca catactattg ttagtgggta tcttgctttt
     2281 ggcagcgacg aatcttataa aaaccattgg gacacccgcg atgtgtatgc catccagctt
     2341 ttcggcaaga aacgttggca acttactgcc cctgatttcc ctatgccatt gtatatgcaa
     2401 cagactaaag atactgatat ttccattcct gaacatatcg atatggatat tatccttgaa
     2461 gcaggtgatg tcctctacat cccgcgcggt tggtggcaca gacctatccc gctcggctgt
     2521 gaaaccttcc acctcgctgt cggtaccttt ccgcccaacg gctataatta cctcgagtgg
     2581 ctaatgaaga aattccccac gatagaaagt ctgcgccaca gtttctcaga ctgggagcaa
     2641 gataggacgc gtatcaacga tactgccgca caaattgctg ccatgattgc cgaccccgtc
     2701 aattacgaag ccttcagtga agacttcctc ggcaaagaac gcaccgatac cgcttttcat
     2761 ctcgaacagt tcgcgaatcc caacgctact ccgctttcag acgacgtcag gttgagacta
     2821 aatgccaata atttggatac gttggaaaag gggtatttga ttgggaatgg gatgaagata
     2881 agcgtagatg agttggggaa aaaagtttta gaacacatcg gtaagaatga accgttattg
     2941 ttgaaaaatc tactggttaa cttcaatcag ggaaaatatg aagaagttag gaagttgatt
     3001 tatcagttga tagagttaga ttttctggaa attttgtgag ggattctatg aaaaactgga
     3061 agcaatttac atttttcgta atattagtaa tagcttgtta tcaagtgcta tattttttat
     3121 cagatatgtt tcttctcgac tacattaaca aatatagttg gaatttgaat tttattcagg
     3181 gtactttgaa ttttttttca atatatctgc catatgtttt tgttagccga atttttagga
     3241 ataccaacca agaaaaggag tataaaaatg attgaacttc aacttcatga attgaagctg
     3301 gtttcagggg gaggtcctgt aacagacaat atagctggaa atgtagctaa tgctgccaca
     3361 accaaaggag gtcccacatg gggggatttg gttgcaatac ctgctgccgc agcggcagtt
     3421 tattatctgc cgaaaaatgc ttacggtgct gctggtgcaa atggtgtata caatgtgact
     3481 cgtgattggg taaatgatgc cgttaatgca cctccttata acggaagacc aatctttgag
     3541 attgaacatg gattaactgc tcccgcaaca aaagcagata aatcaggaaa cggctacact
     3601 gacggtacag attactgctg atatttctca ttgttcagac gatctctagg ggtcgtctga
     3661 aactttctta acttcaattt tatgaataga cccaagcaac ccttcttccg tcccgaagtc
     3721 gccgttgccc gccaaaccag cctgacgggt aaagtgattc tgacacgacc gttgtcattt
     3781 tccctatgga cgacatttgc atcgatatct gcgttattga ttatcctgtt tttgatattt
     3841 ggtaactata cgcgaaagac aacagtggag ggacaaattt tacctgcatc gggcgtaatc
     3901 agggtgtatg caccggatac ggggacaatt acagcgaaat tcgtggaaga tggagaaaag
     3961 gttaaggctg gcgacaagct atttgcgctt tcgacctcac gtttcggcgc aggaggtagc
     4021 gtgcagcagc agttgaaaac ggaggcagtt ttgaagaaaa cgttggcaga acaggaactg
     4081 ggtcgtctga agctgataca cgagaatgaa acgcgcagcc ttaaagcaac tgtcgaacgt
     4141 ttggaaaacc agaaactcca tattttgcaa cagatagacg gtcagaaaag gcgcattaga
     4201 cttgcggaag atcagtagca aaaacggcac tgggcagaca ggaattgtcg ggattgggca
     4261 tggtatcctc cgatttggcg aagagcaacg aacctgttta tcttgtgaaa ataaaacccg
     4321 acaaaccaac catcactgca tacggtgagg aaaaaccgct gcaaatcggc atgacgttgg
     4381 aagcagacat cctgcacgag aaacggcgat tgtatgaatg ggtattggag ccgatttata
     4441 gtatatcggg caaactgtaa gacttgaggc tgaaagataa agaagttgtc tgaaaccttt
     4501 tcagacgacc agaagacaat aaaaaacaca aacttcaaaa ctgcctgaaa ccatcccctt
     4561 ttacaggcac tccgtttgta aaagcaagga tagggcatct gcccttttga ttgtttgatt
     4621 aacgatacaa ggagtttcaa aatgagagt
//
LOCUS       DAWGBY010000137         4606 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.137, whole genome shotgun sequence.
ACCESSION   DAWGBY010000137 DAWGBY010000000
VERSION     DAWGBY010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4606
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.137"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(84..308)
                     /locus_tag="WHG62_001850"
     CDS             complement(84..308)
                     /locus_tag="WHG62_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HEZ1725912.1"
                     /translation="MDAVQELERRIVELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(309..1697)
                     /locus_tag="WHG62_001851"
     CDS             complement(309..1697)
                     /locus_tag="WHG62_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ1725913.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(1783..2604)
                     /gene="prmC"
                     /locus_tag="WHG62_001852"
     CDS             complement(1783..2604)
                     /gene="prmC"
                     /locus_tag="WHG62_001852"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ1725914.1"
                     /translation="MTFDEWLGLSKLPKNEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(2594..3055)
                     /locus_tag="WHG62_001853"
     CDS             complement(2594..3055)
                     /locus_tag="WHG62_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725915.1"
                     /translation="MQEQNRKSSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAALWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVATIGTFAGKNKERKAASAADGIKNDV"
     gene            complement(3120..4604)
                     /gene="tldD"
                     /locus_tag="WHG62_001854"
     CDS             complement(3120..4604)
                     /gene="tldD"
                     /locus_tag="WHG62_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ1725916.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVRERLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRSKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
BASE COUNT         1050 a         1404 c         1208 g          944 t
ORIGIN      
        1 ttaatccact atatatctta ggtttgcatc ggcaaaatat tcaaacacag ccttttttaa
       61 ggaaatccgg atacggcggc gcatcaataa tgcggcggaa tctcgtcgcg cagggaatac
      121 ggctcttgcg cgtcgggatt cctgtcctgc attttttgat acagcagcct caactgagcc
      181 tgctgcaaat ccagcgtctg ccgcaattcc gccaccatcg cgttcaggcc ggcgattacg
      241 tcctcctgaa gcgcggattg gatttccagt tcgacaatac ggcgttccaa ctcttgaacc
      301 gcgtccattt acagcaccat cgcggcaatc cagccggcaa tcagcagcgg gatgttgtag
      361 tggatgaagg tcgggataac ggaatcgcgg atgtggtcgt gctgcccgtc ggcgttcagc
      421 cccatcgtcg ggcccagcgt ggaatcggac gcaggcgaac cggcatcgcc caacgccccc
      481 gccgtgccga caatggcgac ggtggcaagc ggcgaaaaac ccaaaccgac acacaaaggc
      541 acataaatcg cggcaataat cggcaaagtg gaaaaggacg aaccgatgcc catcgttacc
      601 aaaagcccca ccaccagcat cgccaacgcc gccatacctt tgctgttgcc gaatatcgcc
      661 atactgcttt ccaccagcgg ctgaatatgc ccggtcgcat tcatcacggc ggcaaaaccc
      721 tgcgcggcaa tcataatgaa gccaaccatc gccatcatct tgatgccttc gccgaatacg
      781 tcgtttgcct tgtcgcggtt gatgacgccc aacatcataa atacggcgaa accgagcatc
      841 gcgcccaaca ccagcgagtc ttcatacatc aactgtatgg caaagcatac ggcaatggcg
      901 gcggcagcgg ccaggctgcg gtaggcggac ggctgcggac ggtttgccgc atcggcgttg
      961 cccgccgtat cggcattgtt gctttggtac aggcgcggtt tgcggtaatg gacaaacgcc
     1021 agcaggagtc cggccagcat tcccaacgcg ggaatcgcca ttgccgccat tacgttgatg
     1081 tttttcacat caagctgcgg cgcggcggaa tggatgttgc ccaacaggat ttcattcaaa
     1141 aaaatcgcgc cgaagccgta aggcaggaac atataagtcg taaccagccc gaaagtgatg
     1201 acgcacgcaa tcaggcggcg gtcgattttc aggcggttga acaccaaaag cagcggcgga
     1261 acaatcatcg ggataaaggc gatgtggatg gggatgatgt tctgactcat aatgcccatc
     1321 acaaggataa tggaaagcag cagccatttg accgcgccct cgcccgaacg cacgctgtcg
     1381 ggcataccgc cccggttcag cttgcggacg accgcgccgg caagctgttg cggcaggccg
     1441 gaatgggtaa tcgccattgc aaacgcgccg agcatcgcat aagaaagcgc aatcttcgca
     1501 ccgccttcca aacctttgtt gaacacgggg ataatccccg cctggctgac ctgtcccgcc
     1561 gcatcggcaa tgttttgcag cggcataccc gccaccgcgc cgccgacaaa cgcgccgacc
     1621 gtcaggctca ataccacgtg cacgcgcgac agcgacagca ccagcatcac gattacggca
     1681 actacgactg cattcattgt ttatcgctcc aaacctataa atgtttacat atcgaaacac
     1741 atcataaccc aataatggaa aacccgccaa ttttgcaaac aattatttca aatgcttcat
     1801 atacttcccc agcgtaaccc tgtccaaacc cgccaagtcc ggcagggttt ccactcctga
     1861 aaaaccattc tccgccaaca cgccgcgcac cgccgcgccc tgatcgaaac cgtgttccaa
     1921 caacaaaaaa ccgccttccg ccaaacggtc gggcgcgcct tgcgccaagg tgcggatgca
     1981 gcttaggccg tctgaaaagt cggtcagcgc gatttgcggc tcaaaccgca aatcgccttg
     2041 caacaaatgt ttatcgccgt tttcgatata gggcgggttg gacacgatga tgtcccattt
     2101 cccttcagac ggcatatcgg tgtcgaacca cgaaccgtgt gcaaattcga cccgcgcgcc
     2161 caaatccgcc gcatttttcc gcgccgtttc aagggcgggc gggctgatgt cggatgcgcg
     2221 cacaaacgca tcggggcgtt cgagcgcgac ggttacggca accgcgccgc tgcccgtccc
     2281 caaatcccac acgcgcccgt tttcgggcag gcgcgccaat acggcttcga ccaaatgttc
     2341 ggtttcgggg cgcggaatca gcacgctcgg attgactgta aagcgtctgc cataaaattc
     2401 gcgcacacct aaaatatagg caaccggctc gccgttcaga cggcgttgcg ccagcctgtc
     2461 cgcccgctgt cggacttcgt ccggcatttc ttccccgccc cgcgtcaaca actgcacgcg
     2521 cgtatattcc gaaacatatt gcagcagcat tcttgcttca tttttaggca gttttgacaa
     2581 gcccaaccat tcgtcaaacg tcatttttta tcccgtctgc cgccgatgcg gcttttcttt
     2641 ccttattctt tccggcaaac gtaccgatgg tggcaaccgc aaatgcggca taccacaaat
     2701 aaaatcctgc accgtagcgc acaatatccg atgtattccc tgcttcatcg acgtatacgg
     2761 ctttcacact gaaagccacc aacgccaagc cccaaagtgc cgcatggaca ggcacgacct
     2821 tcttccgcaa cgccagcaaa acaatggccg ccaaccaaac ataattcgca tagaccgcac
     2881 aatacctgat atccaaagaa gcaaatatcg accccaaaat caaaacggtc aaaccctcca
     2941 tgcttccatg attgcccaaa taaaatgcaa cattggataa agacgctatc cacagggcaa
     3001 ccgacaccag caacatcact atgggaaaac ttgatttccg attctgttcc tgcatggttt
     3061 tatcctaatg taaaaggccg cctgaaaacc tttcagacgg catcgtgccg gattccgcgt
     3121 cagattgcgc tgccgccgac ggtcagtccg gcatcaatcc gcaaagtcgg ttgccccacg
     3181 ccgacgggga cgctctgccc ttctttgccg cacacgccga caccgctgtc gagcgcagta
     3241 tcgttgccta tcatggaaac gtgtttcagc acttcggggc cgttgccgat gatggtcgcg
     3301 cctttgacgg gatattgcag cctgccgcct tccacccacc acgcttcgga cgcgctgaac
     3361 acgaatttgc cgctggtaat gtccacctgt ccgccgccga agttgacggc gtaaatgcct
     3421 ttgtcgatgg acgcgatgat ttcttccggc tcatagctgc cgttttccat aaaggtattg
     3481 gtcatgcgcg gcataggggc ggaagcgtaa ctttcgcggc ggccgttgcc ggtggattgc
     3541 gtacccgtca ggcgggcatt ggtttcgtcc tgcatatagc cgactaaaat gccgtcttca
     3601 atcaatacgg tgcggcgggt ttcgttgcct tcgtcgtcga tgttgagcga accgcgccgg
     3661 ccggcaatat caccctgatc cacaacggta acgcctttgg cggcaacacg ctcgccgatt
     3721 cggccggaga aaacgctggt ttctttgcgg ttgaaatcgc cttccaaacc atgtccgacc
     3781 gcttcgtgca gcaacacgcc cggccagccg ttgcccaaaa cgacggtcat ctcgccggca
     3841 ggcgcaggac gagattcgag attggtcagg gcttgtttga cggcggcatc gacaaactgc
     3901 cgcaccaagt tttcatcgaa ataagccaag tcgtagcgtc cgccgccgcc cgcgctgccc
     3961 tgttcgcggc gttcgccctg tttggcgata acggtaacgt tcaggcgcac catcgggcgg
     4021 atgtcggcgg cgtgtttgcc gtccagacgg gcgaggtaaa ccatatcgta ttcgcaggtc
     4081 aaaccggcca tcacttgcac gatacgcgga tcggcggctt tggcgattgc ttccactttg
     4141 ttcaacagcg cgactttggc ggcggaatcg aggccggcaa tggggtcgga cgcggaacaa
     4201 accggcttgc tgcgcgtttc agacggcatt ttggcggaca ccttgccgcc tgccgcccca
     4261 atcgcgcgga cggcgcgggc ggaacggttt atcgaatcga tgcacaggct gtcggcgtag
     4321 gcaaaggcgg ttttatcgcc cgaaacggcg cgcacgccca cgccctgatt gatttggaag
     4381 ctgcccgatt tgacgatgcc ctcttccaaa tgccagcttt cataagcggt gcgctggcag
     4441 tagatgtcgg cataatcgac gtggtgcgcg ccgatgatgc acaggctttt ggcgagcagt
     4501 tcgggggaaa ggcggttggc ttcgagcagc cgctctcgta cggcggaata ggtaggatgc
     4561 atagtgtcgg cgcataaaaa atcaggggct tgattatacg gcattt
//
LOCUS       DAWGBY010000138         4596 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.138, whole genome shotgun sequence.
ACCESSION   DAWGBY010000138 DAWGBY010000000
VERSION     DAWGBY010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4596
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.138"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(158..1267)
                     /gene="mltB"
                     /locus_tag="WHG62_001855"
     CDS             complement(158..1267)
                     /gene="mltB"
                     /locus_tag="WHG62_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ1725917.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKES
                     RPAFDAAAVFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKAD
                     IVKIMHRPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAV
                     IGIETNYGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGS
                     YAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILV
                     SATLAPGADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEY
                     YLGLNNFYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1176..1427)
                     /locus_tag="WHG62_001856"
     CDS             complement(1176..1427)
                     /locus_tag="WHG62_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725918.1"
                     /translation="MPLDGIFGGGRQISGGAKGNARHSAKPPIAADTAFRAAPLRRFP
                     TYPICSEHIYEKEKNTAAGNLFGGFVCLYGDGGTPAPGK"
     gene            complement(1468..2895)
                     /locus_tag="WHG62_001857"
     CDS             complement(1468..2895)
                     /locus_tag="WHG62_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ1725919.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDAAACLLNDIRKDILDCRYCG"
     gene            3080..>4596
                     /locus_tag="WHG62_001858"
     CDS             3080..>4596
                     /locus_tag="WHG62_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ1725920.1"
                     /translation="MTYPIPKPREKSRWSNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHTLPDLAVNRQSDEPLQALKDFQTTFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDEVTDQTE
                     FSAAATNPLPSPLPQEREQSAAAVSDSLKAAAVSTESSLPLGTSNLHGQIRQQPAP"
BASE COUNT          980 a         1304 c         1260 g         1052 t
ORIGIN      
        1 tgcaaaaatg ccgtccgaac cgaaacgtgg ttcagacggc attttatagt ggattaacaa
       61 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcaaggcaac
      121 gccgtactgg tttaaattta atccactata aaaaacatta caatcccggg ccgccaagcg
      181 aattggcaat gtccctgacc gccgttacat acatccgact gtgattgtac tgccataccg
      241 tataaaaatt gttcaagccc aaataatatt caaacacgcc gggtgcggtt tccagtttga
      301 acaaaaccgc cttttcatca tctgcaagct cttcgccggg gatgatgccg tacgccttta
      361 aatccgccac cgtccgcgtc agggcggttt tttcgccaat gattgcctga acatccgcac
      421 ccggcgccaa tgttgcagac accagtattt tcccgcccgt gcgccaaccg tgctgcttca
      481 tataattggc aaccgatgcc gcgacatcgc cgatgttgcc ccatatgtcc cgatgtccgt
      541 ccccgtcata atccaccgcc catttccggt agctcgaagg cataaattgc ggcatcccca
      601 ttgcgcccgc atagctgcct ttaaaggcga aaacatcgcc gccttcttct tttgccagct
      661 ttaaaagctc gaccaattct ttttggaaaa acccggcgcg gcgggggtaa tcaaagccta
      721 aggtcgccaa tgcgtccgcc acacggaaac tgcccgtatt tttgccgtaa ttcgtttcaa
      781 tcccgataac cgccacgata agttcggcag gcacgccgta tttttgcgcc acatcatcga
      841 taagcgcgcg gttttccgca taaaaccggc gcgcgccgcg aaatttcgcc ttgcccgaat
      901 ttcccgtgcg gaacacatac cacggacgcg atgtggaggg gcggtgcata atcttgacga
      961 tgtccgcctt gtaagccgct ttgtcaaaaa aatcctgcca ttccgcccgg gaaaaatccc
     1021 ctttcccgac ttcatcgtcc acaaaacggc ggacatttgc attggcggca aacccgctgt
     1081 cggataccgg tacggctgcc gcgtcaaata cggctgccgc gtcaaacgcg gggcggcttt
     1141 cttttttcat ttcatccgcg cggggggctt gggcttcatt tgcccggggc gggcgtgcct
     1201 ccatcgccgt acaggcagac aaagccgcca aacaaattgc cagcggcagt atttttctct
     1261 ttttcataaa tatgttccga acaaataggg taagtgggaa agcggcgcaa gggcgcggcg
     1321 cgaaatgcgg tatccgccgc aatcggcggc tttgcagaat gccgcgcgtt gccttttgcg
     1381 ccgcccgaaa tctgcctgcc gccgccgaaa atgccgtcta aaggcacttc ccctttcaga
     1441 cggcattgcc tgcgccgtat ttgcccgcta tccgcaatat cggcagtcca atatgtcttt
     1501 gcggatatcg ttcagcaggc aggctgccgc gtcttcgtgt tccgcctgta cgaagacaaa
     1561 gagtcgggcg atgattttgc cgataaagac tttttgcagg gcgcaggcgt cggtcagcgt
     1621 gtgttcctgc aggaagctgc ggatgtcttc gggtaaggtg taatcacggg caacggcggc
     1681 aaagcgggca tcggtttgca ggcggtcgag cagggtttgg tttttgtcca acttcatgcc
     1741 tgcttctttt tcttcggcgg tggcgcggac aaactggtcg taaatttcgg cataaagcat
     1801 atcgttcggg ccttcaaaaa tcgtgaaggg gcggatgtcg atagcgatat tgccggcggt
     1861 gtgtccgcgt tcaaaaccct tcgcgcccaa gagtttttgc aacatttgcg cggcggcgta
     1921 agtgtattcc gtggcgaggg ttttgacgat gttcgcctcc atcagctgat gggcgacggg
     1981 ggcaacaggc gaaacggaat ggcagacgta gcggtaaaga atctcggaaa cctgatggcg
     2041 gcgccggatt tcgcggcgtt cgtaatcgac gaatctgatg tcgttgcgga cgtatcgttc
     2101 caggttttca aggatgtatt ccataatgcc gtgcgtcatg ccgatcagtt gcaggcggct
     2161 gcggataaag atgttttgga acgcgcgcaa accggcagcg tcgctctggg agagtttcat
     2221 cacggcggtt gcaggcattt cggcatcgat gcggttgacg gcgtaacgga cggcgcgcaa
     2281 gccttcggat gcgagggttt cgcagcggat gtatgttttg gggacgagca gcaggtcgat
     2341 gactttggcg agtttgccgt ttttgcgttc tttggcggca acgaggagga agtcgctttg
     2401 cgagttgccc tgccagtatt ttgcggcgtt gacgtaaatg gtttgtccgt cggtatattc
     2461 gtagtaagac tgcatttctc gggcaatcgc cgcgccggag gtttcgggtt cggtaacgcc
     2521 caaaccaccg ccctcgcctt tgaaaaccat gtccaaaccc tgtgcgattt gcgcttcatc
     2581 gccgaactct tgcagtggct gcaacaccag cgcgccttcg atgccggtac gcagcgtaac
     2641 gggcacgccg taatgccccg caatccgcaa gacttcctga atttcaaact ggctgccctt
     2701 gcgcccgccg tgttttttgt cgaggaaggg caacagcaaa cccgcctgct tcaaggcaag
     2761 ccatttgtct tcgggcaggt atcgcatcag gtcgataccg tctgaaaaaa tgcggcggaa
     2821 tgcggattcg atgtgcttta aaaaagcagc cgtgtccata gttgacggct gcgcgctcgg
     2881 ttcggtgtgt atcatcggct tcctctatcg gttcccatta atcggcggcc ggtcaaaccg
     2941 cctgccacag tttagagttg attttctaaa ctttaccaca aagtgcgccg ggcaacaatc
     3001 cgccgacctt tcagacggca tcgcgccccc tcccgtgcta aaatgaccgt ttgcatcact
     3061 gtccgccgat tgccgcacta tgacctaccc catccccaaa ccccgtgaaa aatcccgttg
     3121 gtccaatctt tcgcaaggct cgctgccctt ggctttggcg cgttatctgc cgcataagcg
     3181 gctcaaggtc gtgctgaccc aagatgcgga acaggcgcta cgccttcaga cggcatggcg
     3241 gtttttccgt ccgcacgaca cggcggtgtt cctgccggac tgggaaacgc tgccttacga
     3301 gcgtttttcg ccgcatcagg atttggtgtc ggaacggctg tcggcgttgt ggcagattaa
     3361 gagcggcgcg gcggacgtgt tgttcgtgcc ggttgccacg gcgatgcaga agctgccgcc
     3421 cgtgccgttt ctggcagggc gcacgttttg gctgaaaaca gggcagactt tggatatagg
     3481 ccgtctgaaa accgatttgg tagatgcggg ctacaaccat gtttcccatg ttgttgcggc
     3541 gggcgagttt gccgtgcgcg gcggcattgt cgatttgttc cccatgggca gcgaaatgcc
     3601 ctatcgcatc gatttgtttg acgatgaaat cgacagcatc aaaacctttg atacggacac
     3661 gcagcgcacc atctcccccg tttccgaaat ccgcctgctg ccggcgcacg agttccccac
     3721 cgacagcgaa gcgcaaaaaa tcttccgcag ccgcttccga gaagaagtcg acggtaatcc
     3781 gaacgatgcg gctgtgtaca aagccgtcag caacggccac ttcggcgcgg gcgtggaata
     3841 ttatctgccg ctgttttttg aaaatgagct ggaaacgctg tttgactata tcggcgaaga
     3901 cgcgctgttt gtctctttgg gcgatgttca cgccgaggca aaccgctttt ggagcgatgt
     3961 caaatcccgt tacgcgatgg cgcagggcga cgaaacctat ccgcctttgc ttccacagca
     4021 tttgtatctc tctgctgatg tttttgcagg ccgtctgaaa aactacggac aagtgctgcc
     4081 cgatgtttcc ggcaaggaac acaccctgcc tgaccttgcc gtcaaccgcc aatccgacga
     4141 gccgttgcag gcattgaagg attttcagac gacctttgac gggcggattc tgctgtgcgc
     4201 cgaaagcttg ggacggcgcg aaaccatgct cggtttcttg cagcaaaacg gtttgaaagc
     4261 caaacctgtg tccgactggc agggcttctt gtcggcgcat gagccgctga tgattacggt
     4321 cgcgccgttg gcatacgggt tcaaactggg cggactgcaa tcgccgaacc aacagcaaac
     4381 tacttccgcc tccgagggag aaggcgatga ggttaccgac caaaccgaat tttccgcagc
     4441 cgcaacaaac cctctcccta gccctctccc gcaggagagg gaacaaagtg ccgccgccgt
     4501 ttcagacagt ctgaaagcag ccgccgtttc aaccgaaagc agcctgcccc tcggtacaag
     4561 taatctgcac gggcaaatcc gacagcaacc tgcccc
//
LOCUS       DAWGBY010000139         4545 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.139, whole genome shotgun sequence.
ACCESSION   DAWGBY010000139 DAWGBY010000000
VERSION     DAWGBY010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4545
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.139"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(156..1094)
                     /locus_tag="WHG62_001859"
     CDS             complement(156..1094)
                     /locus_tag="WHG62_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725921.1"
                     /translation="MLELNGLCKRFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIQLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEVHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRGTLRRMTAERIRKGGIPAVLVTHSPEEACTEADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVARLMGLPNTDDDRHIPQHAVRFDQDGMECRVLSHTCLPESFSLSVLHP
                     EHGILWLNLDMPHAGEISGNDTVRIHIEDREIVRFR"
     gene            complement(1103..1978)
                     /locus_tag="WHG62_001860"
     CDS             complement(1103..1978)
                     /locus_tag="WHG62_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ1725922.1"
                     /translation="MPTVRFTESVSKQDLDALFEWAKASYGAESCWKTLYLNGLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGKRSPHKAVDPDK
                     LDNIAAGGVSGGEMPSEAVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2160..2236)
                     /locus_tag="WHG62_001861"
     tRNA            complement(2160..2236)
                     /locus_tag="WHG62_001861"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2200..2202),aa:Met,seq:cat)
     regulatory      2386..2485
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2577..4478
                     /gene="thiC"
                     /locus_tag="WHG62_001862"
     CDS             2577..4478
                     /gene="thiC"
                     /locus_tag="WHG62_001862"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ1725923.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKSGGNVTQLHYARRGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTHPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRSGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1080 a         1307 c         1211 g          947 t
ORIGIN      
        1 cgtgttgggt tctagattcc cgcttttgcg ggaatgacgg cagggtggtt tctgttgttt
       61 cggataaatt ttgcagccct gataaaaaat atggctgctt tggtaaaaaa tgccgtctga
      121 aaggttttca gacggcattt tgtttttaag aagcatcagc ggaagcggac gatttccctg
      181 tcttcgatat ggatgcgtac cgtatcgttt cccgatattt caccggcgtg cggcatatcg
      241 aggttcagcc acaggatgcc gtgttccgga tggaggacgg acaggctgaa cgattcgggc
      301 aaacaggtat gggataatac gcggcactcc atgccgtctt ggtcgaaacg caccgcatgt
      361 tgcggaatat ggcggtcatc gtcggtattg ggcaaaccca tcagtcgggc gacctgcacg
      421 ccggcaggcg tttgaaccaa ggtttcgggc gtaccgcatt gaaggatttt cccctcgtgc
      481 atgacggcga tttcgtccgc ctccgtgcag gcctcttcgg gcgaatgcgt taccaaaacg
      541 gcagggatgc cgcccttgcg gatgcgttcg gcagtcatgc ggcgcagcgt gccgcgcaaa
      601 tgcgtgtcca aactggaaaa cgattcgtcc aacagcagca gggaagggcg gacaaccaaa
      661 gcgcgcgcca gtgccaaccg ttgtttctcg cctccggaaa gtttttcagg cttgcggtgc
      721 acctcgtttt ccagtccgac ttcggcaagt gccgccatgg caaggcgttc ggcttcggct
      781 ttcggcattt tttgcatttt caaaccgaat gccgcatttt ccagcgcact catatgggga
      841 aacagcgcgt aatcttgaaa catcagcgaa atacggcgtt tttcgggcgg catacgggta
      901 atgttttccc cgttcagctg aatttcgccg ccgtccggcc ggacgatgcc cgcaatcata
      961 ttcagcaggg tggattttcc gcagcccgac cgccccagta cggcgagtat tttgccgcgc
     1021 ccgacagtca ggcagatgtt gtcggcaacc gttttgccgc cgaagcgttt gcagagtccg
     1081 ttcagttcaa gcatggcgca tcctataaac gtatgccgtc cagccactcg gacagcggat
     1141 gggcggcatc aatcagaccg taacggcaaa acgcgtccag cgtaaccagt tgcgcgtcgt
     1201 gcatcatgtt tcccgacaac atggtggcaa ccaagctgcc gatgtccatt ttttcaaaac
     1261 acgcaacctc gccgtcctga ttttcaggca ggaaggtttc gggtaggacg gcatcgaata
     1321 catacaggat ttcattgtgc acaccccggc tgacggggcg caggctgtgc agccgggata
     1381 ccggacggat aaacggaaac agcgttttat ccaaaccggc ttcttcgctg ctttcgcggc
     1441 acacggcttc agacggcatt tcgccgccgg aaacaccgcc ggcggcaata ttgtcgagtt
     1501 tgtcgggatc gactgctttg tgcggactgc gcttgcctat ccagaaatgc catcggccgt
     1561 ccgattcggt cagtccgttg agatggacgg cgcggctgag cagtccgaac ggacggaaag
     1621 cggcgcgttc gagcgtgaac aaggggttgc cgccgccgtc ggtcaggtcg aaacactcgt
     1681 tgcgccatcc gtgaagcagc cccgccttgt tccatgtgcg ggcgaggtgc tgcaagcggc
     1741 cgcccatatc tgaccagccg tccgcattca ggaaaatgcc gtctgaagac tccgagcagc
     1801 ctgcctccca gtcttttttg acgcgctccg cccattccgg cgacaggttg cccaaaggca
     1861 ggccgttcag atacagcgtt ttccagcaac tttctgcacc gtaacttgcc tttgcccact
     1921 cgaacagggc atcaaggtct tgtttgctga cggattcggt aaaacggacg gtcggcatgg
     1981 ttggctttct tgaagacaat gcggaagatt gtagccaaac tgcctgaatt tgcaaccgca
     2041 aacagacggc gggctgccgt tccgatattg cggcaggaag gaaaatccgg caaaaaacgg
     2101 aggcggcagg aaacaggcaa aacaaaaccc ctcggcattg aaccgagggg tttgatattt
     2161 ggttgcggga gcaggattcg aacctacgac cttcgggtta tgagcccgac gagctaccat
     2221 gctgctccat cccgcgtcag aaaacgaaac tatacggcag attttttatg ttgtcaaaca
     2281 ttatttccgc gaaaaatcat aaaattttgc cgtccggcgg tttatgcctg atttgaaata
     2341 tcattttctt tacaaaagtt catgttcgtg atttaatttt gaccaacatc gaaacagggg
     2401 tgctgcccgg caatcaggcg gctgagaaat accctttaca cccgatcggg ataatacctg
     2461 cgtggggagt tttcacggat tctgcctttc agacggcatt ggttttcaaa tgccgtctga
     2521 aaacgcaaaa cgctcctgtt tctttaattc taaacgagaa aacaggagca ttttttatga
     2581 ctacgccaaa aaaaactgcc aaaacttccg gcaacgaagc gcgcgagctt gccgacttga
     2641 gcgaagacat cggcatccgc tttaaatatc cgaactcgga gcgcgtgtat ctgcaaggca
     2701 gccgcgacga catccgcgtg cctttgcgcg aaatccgtca ggacgacacc tacacggcgc
     2761 aaggcacgga agccaacccg ccgattcccg tctatgacac cagcggcgtg tacggcgatc
     2821 cggcggcgca catcgacctg aaacaaggcc tgccgcacat ccgcactgca tggctgaacg
     2881 aacgcggtga taccgaaatc ctgcccaagc tttccagcga atacggcatc gaacgcgcac
     2941 acgatccgaa aaccgcccat ctgcgcttca accaaatcac ccgcccgcgc cgcgcgaaaa
     3001 gcggcggcaa cgttacccag cttcactacg cgcgccgcgg catcatcacg cccgaaatgg
     3061 agtttgtcgc catacgcgaa cgtttaaaat tagacgaatt gtcccaaaaa ccggaatacg
     3121 ccaaactctt gaaacagcac gcagggcaaa gtttcggcgc gaatatcccg acccatcccg
     3181 accaaatcac gcctgaattc gtgcgccgag aaattgccgc cggacgcgcg attatccccg
     3241 ccaacatcaa ccaccccgaa ctcgaaccga tgattatcgg ccgcaacttc cgcgtcaaaa
     3301 tcaacggcaa cttgggcaat tccgccgtca cttccagcct gaccgaagaa gtcgaaaaaa
     3361 tggtgtggtc gctgcgttgg ggcgcggaca caattatgga cttatccaca ggcgcgcaca
     3421 tccatgaaac gcgcgaatgg attatccgca acgcgcccgt ccccatcggc accgtgccta
     3481 tttatcaggc tttggaaaaa accggcggca ttgccgaaga tttgacttgg gatttgttcc
     3541 gcgacacctt aatcgagcag gcggaacaag gcgtggacta tttcaccata cacgcgggcg
     3601 tgttgctgcg ttatgtaccg atgaccgcca accgcctcac cggcatcgtc tcgcgcggcg
     3661 gttcgattat ggcgaaatgg tgtttggcac atcatcggga aaacttcctc tacacgcatt
     3721 tcgacgaaat ctgcgaaatc atgaaagcgt atgatgtgtc gttcagcctc ggcgacggcc
     3781 tgcgctccgg ctgcattgcc gatgccaacg acgaatccca attcgccgag ctgcacacct
     3841 tgggcgaatt gaccgataaa gcgtggaaac atgacgtaca agtcatgatc gaaggccccg
     3901 gccatgtgcc gctgcaacgc gtcaaagaaa acatgaccga agagctgcaa cactgctttg
     3961 aagcaccttt ttacacactc ggcccgctcg ttaccgacat cgcacccggc tacgaccaca
     4021 tcacctcggg cataggcgcg gccaatatcg gctggtacgg cacggcgatg ctttgttacg
     4081 ttacccccaa agaacatttg gggctgcccg acaaagaaga cgtgcgcacc ggcatcatca
     4141 cctacaaact cgccgcccac gccgccgatc tcgccaaagg ctggccgggc gcacaattac
     4201 gtgacaacgc cctgagcaag gcgcgtttcg agttccgttg gcgcgaccaa tttcgcttaa
     4261 gcctcgaccc tgaacgtgcc gagagcttcc acgacgaaac cctgcctgcc gaaggcgcga
     4321 aaatcgccca cttctgctca atgtgcggcc ccaaattctg ctcgatgaaa atcacgcagg
     4381 aagtgcgcga ctacgccgac aagcaaaaag cccaacggca gggcatggag gaaaaagcgg
     4441 tcgagttcgt caaaaaaggc gcgaagattt acagttgaaa cgtcaagcaa aaaatgccgt
     4501 ctgaaacccg gaaaaaaggc ttcagacggt attctttcgc ttgtg
//
LOCUS       DAWGBY010000140         4523 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.140, whole genome shotgun sequence.
ACCESSION   DAWGBY010000140 DAWGBY010000000
VERSION     DAWGBY010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.140"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..404
                     /locus_tag="WHG62_001863"
     CDS             <1..404
                     /locus_tag="WHG62_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1725924.1"
                     /translation="RSLKGQIVKAQISGKRYQRLSLVSAQVGNRLIAPMVYQNTMIGV
                     FFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPLAPYLPELNPIE
                     KVWANIKRYLRTVLSDYARFDDALLSYFDFN"
     gene            complement(568..1971)
                     /locus_tag="WHG62_001864"
     CDS             complement(568..1971)
                     /locus_tag="WHG62_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ1725925.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTGLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(2040..3467)
                     /locus_tag="WHG62_001865"
     CDS             complement(2040..3467)
                     /locus_tag="WHG62_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ1725926.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     VVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            3703..4045
                     /locus_tag="WHG62_001866"
                     /pseudo
     CDS             3703..4045
                     /locus_tag="WHG62_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3982..4332
                     /locus_tag="WHG62_001867"
     CDS             3982..4332
                     /locus_tag="WHG62_001867"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725927.1"
                     /translation="MQNGGGKIYQTADNVEGIMLLKVVPERTVSADAKTRDPMWDNAA
                     LQTSEGVNFIARFLGFFSDGEYRYVDVLQPNHSDIIRYSGKDFPLNQILNHIHPARYA
                     VTFENNVDSKLRRH"
     gene            4333..>4523
                     /locus_tag="WHG62_001868"
     CDS             4333..>4523
                     /locus_tag="WHG62_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725928.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSV"
BASE COUNT         1073 a         1181 c         1112 g         1157 t
ORIGIN      
        1 cccgcagcct gaaagggcaa atagtaaaag cgcagataag tggaaaaaga taccaacgct
       61 tatctttggt gtccgcacaa gtcggcaacc ggctgattgc tccgatggtt tatcaaaata
      121 cgatgatcgg agtctttttt gaagcgtggt ttcagcaatg cctactgccc gcattgactc
      181 aaaaatcggt gattatttta gataatgcgc gatttcaccg tatgggtgtc ttacgggaaa
      241 tggcggaaaa attgggacat aaggtattgc ctcttgcacc ttatttacct gagctcaacc
      301 cgattgagaa agtgtgggcg aatattaagc ggtatctgag aaccgttttg tctgattacg
      361 cccgatttga cgatgcacta ctgtcctatt ttgattttaa ttgaatatac atttgaatta
      421 attcgcactt aatttaaatg tgtttttaac tgtgctttat ttaaaggcaa tgagaatgtg
      481 aaagtatcgg atcaatccca aagcagcctg cactttcgaa acggggtgca ggctgctttg
      541 ggaatttcat aaccgtttca gcctgcttta ttccgcaaat accgtttcca accctaaccc
      601 gctctctttc accaagcgca aataagccag catgaattta taccgtgctt gagccagttt
      661 ctgttctgct tgggcgactt cctgccgcgc ccgtattact tccagccggt tgcggatgcc
      721 gtattgttgg ccggtttcgg tcgatttcag tttcaaacgg ctgctttcca aaacccgttc
      781 ttgcgccatg atttggtaac gcgccgcacc gctttcggta taagcctggc gtacggcgag
      841 tttgatgtgc cgctcggttg cggtcagctg tgcttcggcg gccccgtatt gcgcttcggc
      901 ttcatggatt ttgcccgaca attctccgcc ggtataaagc ggcaaattca actgtacgcc
      961 gacgctcatc cctttgcccc gatagtggta gtcattattc tgcgcagatg aagtgtagag
     1021 gttattctga tagccgacat gggcagaaac ggtgggatag cggctgttct gtgctgcccg
     1081 aagcgcctgt ccgctgcttt gcagggcaag ctgctgcatc cggtattcat gattgttgga
     1141 taaggcaatg cgctgccatt catccagact gtaacgttcc agcttgggca gatagcgtgc
     1201 caacaggttg gcggtatcta tggcctcgat ttgtttgctg tccaggccgg tgtagtcgtt
     1261 caactggttt tcataggttt gtttctcagc caatacggcg atttcttggg ccagggcatt
     1321 gtcgtaaccg gctttggctt cgtgaatatc cagcgcggtg gcagcacctt tattgaataa
     1381 agcctgcgcc tgccttacct gctgggcata agcctctttt tccgccgcat gggcggcaac
     1441 ggtgtctcgg ctgagtaaaa cgttgaaata actttcggca actttcaaca gcaattcttc
     1501 gcgtgccgca tcgaaacgct gttctgcagc ctgcgtatcg aacctgcttt ggcggtattg
     1561 tgcaaatttg gcagcgtcaa ataaggtttg tcccacctgc acgctccatc cctgtgtttc
     1621 gcgggtggaa gaaatcgatg gcggctggcg ctggtagctg gcattggcgg atacatgggg
     1681 aaggaatgcg gccttggctt gttgttgccg tgcgcgcact gcatcacgct ggtaatggga
     1741 cgcttgaaaa tcagccgaat gttgctgcgc cgcccgccat gcttcaggca gcgtaaaagc
     1801 cgaaacggat ggggaaaggg atagtggcaa ggtaaaaagt gaaacgggta ggatatattt
     1861 ggaaaaatag gatttcatag ccgaaaatag ttcatgttgc aaatagggcg tcagtgtcag
     1921 gcaaacggaa ataccgtaat cttgcattat cattagattg agcaatgtca tccgggcaat
     1981 ggtttcaggc agtctgcatg tccgaaccgg cggataacaa atgcccagta tggatccgcc
     2041 tatcgctccc taaagctttc gtccaatttg gtttgcagcg ggcttaacag ataatccagc
     2101 acccgccgtt tacccgtttt aatctccgcc gtgacattca tgcccgccgt cagattcact
     2161 gctttgccgt caatattcaa ggtatgtttg tccagcgaca ccaccgccgt ataaaccaag
     2221 cccaactgtt cgtggcttac cgcatcatgg ctgacacttt tcaccttgcc cgtcagataa
     2281 ccgtagcgcg tatagggaaa actctcaatc ttcaccaccg catcctgtcc ctgttccaca
     2341 aaaccgatgt ctttgttcaa taccaaaact tccacgtcca ttttgtcgtc atcgggcgca
     2401 accaccatca ttttttgggc agcctgcacc acaccgccca ccgtataggt ggccaattcc
     2461 tgcaccgtgc cgtccgcagg cgactgtatt gtcatcagct gctgccgctg ctttgcctta
     2521 tccgtttggc cgcggtattg gtcaatctgt tcgtttgcct ggcgcagcgc atccagcgta
     2581 tcgcgtttca ggttctgcgt attcagcacc cgattctgct ccgcctgtgc aatggccgcc
     2641 tgaatctgcc tcatctgacc gcgcgtactt tccaaatcgt tccaattgct gaccgatttg
     2701 ctctgctgct ccaaaaacgc atgttccgaa ataaaattgt cggcccgcaa acggcggtag
     2761 tctgctgttt tctgctgctc gatcgccccc accgaaacca gcttctgctc ctgcgccttg
     2821 gccgactgca attccgcctg atggccgcgc aaagccgact gcaattgcgc atcctgcgcc
     2881 gcccatgcct gatactggtg ctgcgccaac acctgcgccg attgcacatc ggcatcggag
     2941 agacctaaag accgtgcttg cgccatatcg atatgcggca cggtacggct ttccaatgcc
     3001 gccaataccg cttcataacg cagtttggac aattgggcag cctgcaaagc ctgctccgac
     3061 tgcaccacat cgctgtctgt tcccacagcc tccagttccg ccagcgtttc tccctgtttc
     3121 acatgctgcc cgtcgcgcac atgtaccgcc ttaaccacca ccgtttccag cggctggatg
     3181 gttttgctgc gcccgcccga caccgttttg cccgaagccg ccgccacaat atcgattttg
     3241 ccgaaccagg accacaacaa agccaaaagc gcaaacgcca taataaaacg cgccgcccat
     3301 ttcggagcgg cagagaccgg cgtatcggtc agttccaaat gcgcgggcaa aaacgcctgt
     3361 tcttccgccg tgcgtttggg cggttccaac tggtcgcgca ccgcccaaac attgcgccat
     3421 acggtaatgt agcgggaaag aaaggatttc agggcggaga aaaacataac gggtataacc
     3481 ttggcaatat agaaacagga aacaatataa atatgtaaag gaattttaac ggaaagcgcg
     3541 gcagctgtta agggaaaggc gggaatattg acaaaaaata cccaagtcgt tacaaatatt
     3601 cattatttta ctgcgtaacg caacgctgaa gcgcaggctg cttttgagat gcggcaaggt
     3661 tcggcaaaaa gcagcctgca catttaacca caggaactac ccatgtttac cacaaacgat
     3721 ttacgccatt tcctagaagg tttggccatc ctattctcaa tcggctattg ggacaccatg
     3781 ctgctgttgc tttggtttct cgtccgcttt gcctacaaaa aaccccggca aaatcctttc
     3841 aggcagcctg accgccgccg ctatcctgat gctgtttgtt tggattattc ccaaacaatt
     3901 ctgcccgagc aaagaagaaa tacaggcaca agaagagtgg gacagaaaat acaaagaagc
     3961 cgaagccgtg tttaacgaac aatgcaaaac ggcgggggaa agatttacca gacggcggac
     4021 aatgtggaag ggattatgct gttgaaggta gtacctgagc gtaccgtttc ggcagatgca
     4081 aaaaccagag acccgatgtg ggacaatgcg gctttacaga ccagcgaagg cgtaaatttt
     4141 attgctcgtt tcctaggatt ttttagcgat ggggaatacc gctatgtgga tgtcctgcaa
     4201 cccaaccatt ccgatattat tcggtattca ggtaaagatt ttcctctaaa tcaaatactt
     4261 aaccatatac accccgcccg ttatgcggta acgttcgaaa acaatgtcga ttccaagctg
     4321 cgcaggcact gagtggcagg tgcgaccata cggattatcg accgccaaac tgacgaagtg
     4381 attgccaaga aaaccatcta tgtctttgaa aaaggcttgg acggcacggg tggggcgaga
     4441 atgccgtgga agtttgctat cttgtgcaat aaagaaagac ttacttcttc agagccgtta
     4501 tcggattttg ttcttagcgt ttt
//
LOCUS       DAWGBY010000141         4507 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.141, whole genome shotgun sequence.
ACCESSION   DAWGBY010000141 DAWGBY010000000
VERSION     DAWGBY010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.141"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            1..263
                     /locus_tag="WHG62_001869"
                     /pseudo
     CDS             1..263
                     /locus_tag="WHG62_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin, Grx4 family"
     gene            431..2206
                     /gene="ggt"
                     /locus_tag="WHG62_001870"
     CDS             431..2206
                     /gene="ggt"
                     /locus_tag="WHG62_001870"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ1725929.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            2425..2620
                     /locus_tag="WHG62_001871"
                     /pseudo
     CDS             2425..2620
                     /locus_tag="WHG62_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2687..3937
                     /locus_tag="WHG62_001872"
     CDS             2687..3937
                     /locus_tag="WHG62_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ1725930.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYPVYGA"
     gene            4065..4507
                     /locus_tag="WHG62_001873"
                     /pseudo
     CDS             4065..4507
                     /locus_tag="WHG62_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1245 a         1113 c         1045 g         1104 t
ORIGIN      
        1 atgaaaggca cgccccagtt tccccaatgt ggattttcag cgcgtgcagt agaggtgctg
       61 acccaattgg cagacccttt gcttttgtta atatcctaga aaacccagaa attcgcagta
      121 ctctaccact catcgccaat cggccaacct ttccacagct ttgggttaat ggtgagttaa
      181 tcggtggtag tgatattatc ctacaaatgt accaatcagg tgagctaaaa ccactcattg
      241 aagagcatag cccaaaggtc tgattactta atatcttaaa ataaatatca aaaaagactg
      301 ctgatgacat tagcggtctt tttttgatgg tcaagattga tagtttggat tgaattattt
      361 agccatatta aatacaataa tcagcatgcc ttgtatgaat catcaatcaa actcaggcga
      421 aggagtgctt gtggctaaaa catatttatt gactgcattg ataatgtcta tgacaatctc
      481 tggatgtcaa gtcatccatg ccaatcaagg taaggttaat actcattctg ctgtcatcac
      541 aggtgcagac gctcacacgc ctgaacatgc aacgggactg atcgaacaaa agcaggtgat
      601 tgcaagtgat tttatggtag cgtcagccaa tccattagca acacaagctg gctatgatat
      661 cttaaagcaa ggcggtagcg ctgcagatgc gatggtggcg gtgcagacga cactaagctt
      721 ggtagagcca cagtcgtcag gcttgggcgg tggtgcattt gtgttgtatt gggataatac
      781 cgccaaaaca ttgaccacat ttgatgggcg tgagacggca ccgatgcgtg cgacgccgga
      841 attatttttg gataaagatg gtcaaccatt gaaatttatg gaagcggtgg tcggtggtcg
      901 ctcggtgggt acgcctgcta tccctaaact gatggagaca atacatcagc gatacggtgt
      961 attgccttgg ggaaaattat ttgatacacc gatccgcttg gcaaaacaag gctttgaggt
     1021 gtcgccaagg cttgccatct cggttgagca aaatcagcag catttggcac gctatccaaa
     1081 aacagccgct tattttttgc cgaatggtgt gccgctacaa gcaggcagct tgctgaaaaa
     1141 tttagaattt gctgacagtg ttcaggcgtt agcagctcaa ggtgcaaaag ctctgcatac
     1201 tggtaaatat gcccaaaata tcgtttcagt tgtccaaaat gctaaggata accccggtca
     1261 attatcctta caagatttat ctgattatca agtggtggaa cgcccgcctg tttgtgtgac
     1321 ttatcgtatt tatgaagtat gcggtatggg tgcaccaagc tcaggtggga ttgctgtggg
     1381 tcaaattttg gggattttaa atgaattttc acccaatcag gtggggtatg atgctgaagg
     1441 tttacgtctc ttgggcgacg cttctaggct tgcgtttgcg gatcgtgatg tatatttggg
     1501 cgaccctgat tttgtaccag tacccattcg ccagttgatt tctaaagact acctaaaaca
     1561 tcgcagccag ctgcttgagc agtcggataa ggcattgcct agcgtatctg caggcgattt
     1621 tattcatgag tgggtgtcct cacaagcgat tgagttacct tctaccagtc atatatcaat
     1681 tgtggataag gcgggcaatg tgctatcaat gacgacttcc attgaaaatg cgtttggctc
     1741 aactttgatg gcaaatggct acctgctgaa taatgagctg acagacttta gttttgagcc
     1801 aataaagcag ggcaaacagg tcgccaatcg tgtcgagccc ggcaagagac cacgctcctc
     1861 aatggcacca accatcgtat ttaaagcagg caagccttat atggcaatcg gctccccagg
     1921 tggtagccgt atcattggct atgtcgctaa gacgattgtg gcacatagtg actggaatat
     1981 ggatatccaa gatgccatca gtgcacccaa tttattaaat cgctttggta gctatgaact
     2041 agaaacgggt acaaccgccc tccagtggca acaagcatta aatgatttgg gctataagac
     2101 tgacgtgcgt gagctaaatt caggtgttca agccattatt atcgagccaa gcaggctggt
     2161 tggtggtgcc gatccacgcc gagaaggtcg agtgatgggt gattagaggt gaaacttgta
     2221 ttttgtgaat ttgaccgcat taagttaata ttaaaatagg gggaaattgt gagtaatcaa
     2281 acaaaaatac aagccatcaa gcaagcttct gagcagatct tcgcaatttg tgagacgcca
     2341 aacacagcat tacaagccat tcatctgatt ttaagacatg gtggggcagg agagttgtct
     2401 tggcaagtgg tgtatcagcg ggttatggct gataaagatg tggttggtgc tggttatttg
     2461 attgattttg cacaaactgc cgaaaattta ccatttgatg tattgccttt gggtagcctt
     2521 gtactaacat aaaggtaatg agacgctaaa aaccagcatg ttaaataaat tacctgataa
     2581 tgccaaagaa aatttacgca ttatggacta tctgccttag gttttgaagt atttttttat
     2641 acaaaaaaca ctcatgatac cctgattaca caaaggagcc gagaacatgt tttcaaaaag
     2701 cgttaccctc gcacaatatg accccgattt ggcagcagcc attgcccaag aagaccaacg
     2761 ccagcaagac cacgtcgagc tgattgcctc tgaaaactac gtcagctgcg ccgtaatgga
     2821 agcgcaaggt tcccagctga ccaacaaata cgccgaaggc taccccggca aacgctacta
     2881 cggcggctgc gaatacgtcg atattgtcga acaattggcg attgaccgcg tcaaaaaact
     2941 gttcggcgcg caatacgcca acgtccaacc gcactccggc tcgcaagcca accaagccgt
     3001 gtacgcttcc gttttaaaac caggcgacac cattttgggt atgtctctag cgcacggcgg
     3061 ccacctgacc cacggcgcga gcgttaatat ttccggcaaa ctctacaacg ccgttactta
     3121 tggcttggat gaaaacgaag tgctcgatta tgccgaagtg gaacgcttgg ctctcgaaca
     3181 caaacctaaa atgattgtgg ccggtgcgtc tgcctacgcg ttgcaaatcg actgggcaaa
     3241 attccgcgaa atcgccgata aagtcggcgc atacctcttt gtcgatatgg cgcactatgc
     3301 cggtctggtt gccggcggcg aatatcccaa tcccgtgccg ttctgcgact tcgttaccac
     3361 caccacccac aaaaccctgc gcggtcctcg cggcggcgta attttgtgcc gcgacaatac
     3421 ccacgaaaaa gcgttgaact cttccatctt cccaagcctg caaggcggtc cgctgatgca
     3481 cgtcatcgcc gccaaagccg tagcgtttaa agaagcgttg caacccgagt tcaaacaata
     3541 cgcaaaacaa gtgaaaatca atgctgccgc catggcggaa gaactggtca aacgcggttt
     3601 gcgcatcgtt tccggccgca ccgaaagcca cgttttcctc gtcgacctgc aaccgatgaa
     3661 aatcaccggc aaagccgccg aagccgcttt gggcaaagcg cacatcaccg tcaacaaaaa
     3721 cgccattccg aacgatccgg aaaaaccctt cgttacctcc ggcatccgca tcggttccgc
     3781 cgccatgacc acacgcggtt ttaacgaagc cgacgcgcgc gtattggcga acttggttgc
     3841 cgacgtattg tctaaccccg aagacgaagc caacctcgcc aaagtccgcg aacaagtaac
     3901 tgctttgtgc aataaatacc ccgtttacgg cgcgtaagcc tttttaaaaa tattccgcca
     3961 agcaatccaa tgccgcctga aatctcataa tgtttcaggc ggaaaccttt gcaaaatccc
     4021 ccaaaatctc ctaaattccc accaagacat ttaggagatt tctcatgagc accttcttcc
     4081 ggcaaaccgc acaagccatg attgccaaac acatcgaccg cttcccacta ttgaagttgg
     4141 accaggtgat tgattggcag ccgatcgaac aatacctgaa ccgtcaaaga acccgttacc
     4201 tcagagacca ccgcggtcgt cctgcctatc ccctgctgtc catgttcaaa gccgttctgc
     4261 tcggacaatg gcacagcctc tccgatcccg aactcgaaca cagcctcatc acccgcatcg
     4321 acttcaacct gttttgacgt tttgacgaac tgagcatccc cgattacagc accttatgcc
     4381 gctaccgcaa ccggcgacgc aagacgacac cctgtccgaa ttgccggaac tgatcaaccg
     4441 ccaactgacc gaaaaaaacc taaaaataga gaaagcatcc gccgccgtcg ttgacgccac
     4501 cattatt
//
LOCUS       DAWGBY010000142         4483 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.142, whole genome shotgun sequence.
ACCESSION   DAWGBY010000142 DAWGBY010000000
VERSION     DAWGBY010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4483
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.142"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(1178..1615)
                     /gene="rnhA"
                     /locus_tag="WHG62_001874"
     CDS             complement(1178..1615)
                     /gene="rnhA"
                     /locus_tag="WHG62_001874"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ1725931.1"
                     /translation="MNQTVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            1729..2598
                     /gene="tehB"
                     /locus_tag="WHG62_001875"
     CDS             1729..2598
                     /gene="tehB"
                     /locus_tag="WHG62_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEZ1725932.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKAENLPEILLSGYSSEGGEWVCL
                     NVLQGDVEVRAPDGSAEVWSADGGDCVFAPQQVFSVKPKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAAQDTVPAGRALDMGCGQGRNALFLGLKGFEVTAVDHNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPE"
     gene            complement(2648..3454)
                     /gene="thiD"
                     /locus_tag="WHG62_001876"
     CDS             complement(2648..3454)
                     /gene="thiD"
                     /locus_tag="WHG62_001876"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ1725933.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVRTAKSYITAAISSPLEIGAGHGPVNHWAYRD"
     gene            3515..3712
                     /locus_tag="WHG62_001877"
     CDS             3515..3712
                     /locus_tag="WHG62_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725934.1"
                     /translation="MPSENRSAGVCGALYAVLQDKAQGRAAGCIVATVFLPDGVKNTV
                     ATPTDNEKREQCRLNRVLRRA"
     gene            complement(4300..4375)
                     /locus_tag="WHG62_001878"
     tRNA            complement(4300..4375)
                     /locus_tag="WHG62_001878"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4339..4341),aa:Glu,seq:ttc)
BASE COUNT          988 a         1097 c         1259 g         1139 t
ORIGIN      
        1 aatttaatcc actatagttt aatttgtctg tccgcattgc cgctaattgt accacttcat
       61 cgtatttcct tttcggttga aaccccgcca ctcggacatc tgtccttcgg ggcggcagga
      121 tcagacttta tttgggaggg ggtgtaaccc cttccaaatc aggacgacac atagggaggt
      181 gctttatgtg tcgtcctgtg tgttgaaata tatcggacgc gtttgaacag ttgtgcggca
      241 aactgtttta gcggcaggca agagatgccg tctgatgccg tctgaagccc attgtccgtc
      301 attcccacac aggcagttgc tacggttgct gaagcccctt agccgtcgcg caggcggttg
      361 ctacggttac taaaatcccg tcattcccgc gcaggcggga atccagtccg ttcggtttca
      421 gttgtttctg ataaatcttg cagcgttggg tttttagatt cccgctttcg cgggaatgac
      481 ggggcggtcg gatgccgcct gaaactccgt cattcttgca acttttcgtc attcccgtga
      541 aaacgggaat ctagaacttc aaactttcag ataatctttg aatattgccg ttgcccgacg
      601 gtctagattc ccgcttgcgc gggaatgacg gtagagcggt ttcagttgct cccgataaat
      661 gccgcaatct caaatcccgt cattccctca aaaacagaaa aacaaaatca gaaacctaaa
      721 atcccgtcat tcccgcagct cttcgtcatt cccgtgaaag cgggaatcta gaccttttaa
      781 attttcacac ggcttttgaa tattgccgtt acccgaaggt ctggattccc gcctgcacgg
      841 gaatgacggc agagcggttt cagttgtttc taaataaatt tttgcagcgt tggattttta
      901 gattcccgct ttcgcgggaa tgacggggcg gtcggatgcc gcctgaagcc cgacaaagcc
      961 cccaatgccg tctgaaacct cgtcattcct ctgctgtccg caacttttcg tcattcccgc
     1021 aaaagcggga atctagagcc tctaaatttt cagacggctt ttgaatattg ccgttgcccg
     1081 acggtttgga ttcccgcctg cgcgggaatg acggtggagg acgatgccgt ctaaagccca
     1141 ttagcggttt cagacggcat ttttgccgga gcggcagtca ggaaaactgc gctgcgccac
     1201 ggtttgccaa atcgtcggcg cgttcgtttt ccgcgtgtcc cgcgtgtcct ttaacccaag
     1261 tccagctgac ttggtgctgc ccaaccagaa cgtcgagttc tttccacaag tcgtcgtttt
     1321 tgacgggctg tttggcggcg gttttccagc cgttgcgctt ccaaccgtgt atccagtttt
     1381 ccatgccgtt tttgacgtat tgcgagtcgg tgcagatgat gacggtgcag cggcgtttga
     1441 gcgatttcag tccttcgatg acggcggtca gttccatacg gttgttggtg gtttgcgctt
     1501 cgccgccgaa aagttctttt tcgtggctgc cgtagcgcat taatacgccc cagccgcccg
     1561 cgccgggatt gcctttgcac gcgccgtcgg tgtaaaggta aacggtttgg ttcattattg
     1621 tgcctttatg tggtgtccgg cgtgattata agcggtttgt gcgccgtgcc gtctgaaaga
     1681 ttgcggcgga ttgaaatagg catataatgt gcaactttat ttttgaatat gaaggagcgg
     1741 atagtgggtc aaagcggcga gttgttttgt ttcggacaaa tgcccgtatg gaaggcggaa
     1801 aacctgccgg aaattttgtt gtcgggttat tcgtccgaag gaggggaatg ggtctgcctg
     1861 aatgtgttgc agggcgatgt cgaagttcgt gcaccggacg ggtcggcaga agtttggtcg
     1921 gcagacggcg gcgattgtgt gtttgcgccg cagcaggtgt tttctgtcaa accgaaaacg
     1981 gacgatgccg aaatccgttt gtcgctgtat tgcgcggcgg cagactattt tcacaaaaaa
     2041 tacgggatga gtgccacgca ttctgcggtc gcggcggcac aggataccgt accggcgggc
     2101 agggcgttgg atatgggctg cggacagggg cgcaacgcgc tgtttctcgg tttgaagggg
     2161 tttgaagtta ctgcagtcga tcacaatccc gccgccttgg caaacgtggc ggagctggca
     2221 gaggcggagg gtttgaacgt ccgcacgctg gaatatgatt tgaacgccgc cgccttgcag
     2281 ggtgagtttg attatattgt ggcaacagtg gtgctgatgt tcctgatgcc gcagcgcgtg
     2341 cctgacgtga ttgccgatat gcaggcgcat acggcggcgg gcgggtacaa cttaatcgta
     2401 tcggcaatgg atacggcgga tttcccttgt ccgatgccgt tcccttttaa atttaaagag
     2461 ggagagctga aggattatta tcgggattgg gagctggtcg aatataaaga agaattgggc
     2521 gcgatgcacg ccaaagacga aaacggcaat ccgatacggt ttaaatttgt aacgatgctg
     2581 gcgaaaaagc ctgaataatc ctcaaaaatg ccgtctgaac attttgtttc agacggcatt
     2641 tttacggtta gtcccgatag gcccaatgat tgaccgggcc gtgtcccgcg ccgatttcca
     2701 aagggcttga gattgccgcc gtgatgtagg acttggcagt ccgtacggct ttgcaaacgt
     2761 ctaagccttt tgccaactcg gcggtaatgc aggcagaaaa cgtgcagccc gtgccgtgcg
     2821 tgtgggcggt cggaaagcgc gggctgtcca attccagcgt ttcgttttgc gtaaacagcc
     2881 aatccgtgca gcgtccgctg ctgctgccat tcaaatgtcc gcctttgatg acgacatttt
     2941 tgacaccgta atcaagcagg atttttgccg cacgttccgc atctttacgg ttttcgatat
     3001 gcacgccggt cagggcttcc gcctcgggca ggttgggggt caatacatcc gtatcgggaa
     3061 gcagcaggcg cgtcagtgcc gcaacggcgg aatcctgcaa cagcggcgca ccgcctttgg
     3121 caatcatcac agggtcgagt acgcgcctgc cgaagtcgca gtgtttcagc ttgtcggcaa
     3181 cgcattcgat gatttccgcc gtgccgagca ttcctatttt gtaggcgcgg atgtcaaagt
     3241 cttccctgat tgcttggatt tgtgcggtga tggtttcggt cgggacgaga tgaaccgccg
     3301 acacgcccaa ggtattttgc gcggtaacgg cggtgatgac gcacgttccg aacacgccgc
     3361 gcatctgaaa cgttttcaaa tccgcctgaa tgcccgcacc gccgcccgaa tccgaaccgg
     3421 cgatggtaag cgtttgcaca aaagagcttt tcatttgttc ctccttaata ttgtgtccga
     3481 taaaaagggc taatgcctgt aaaaaagcac ggcgatgccg tctgaaaacc gcagcgcggg
     3541 ggtttgtggt gcattatatg ccgtattgca ggacaaggca cagggcaggg cggcggggtg
     3601 catcgtagca actgtatttt tgcccgacgg ggtgaaaaat acagttgcta cacccactga
     3661 taatgaaaaa agagagcaat gccgtctgaa ccgcgtgttg cggcgagcat aaaccggcac
     3721 gctttattcg tcatttccac aaaaacagaa acctaaaatt ccgtcattcc tacgaaagcg
     3781 ggaatccagt gtgttcggtt tcagttgttt ttgggtttcg ggtgatttcc aaatcatcat
     3841 tcccgcgcag gcgggaatct agcccttggg gcagcggcaa tatttataaa gccgtctgaa
     3901 aattcagagg ttctagattc ccgttttcac gggaatgacg aagggttgtg ggaatgacga
     3961 agttttagac ggcattgaat actttgatgc tttggtgggc tgaagcccac cctacaatat
     4021 agagaaaatg ccgccaaacg gtatggaagc ggaaacaatg gtggggctgg cttcagaaac
     4081 aatggtaggg tgggcttcag cccaccgctt tagacggcat ccgcgcaccg tcattcccgc
     4141 gcaggcggga atccagcctt gtcggcacgg aaacttatcg gataaaacgg tttcttcaac
     4201 cctacgctct agattcccgt tttcacggga atgacgaaga gtgtgagaat gacggttcat
     4261 aaataaaaaa acctgcttaa aacaagcagg tttttgaatt ggcacgccca cggggattcg
     4321 aaccccggtt gccgccgtga aagggcagtg tcctaggcct ctagacgatg ggcgcgtggg
     4381 aatgggcatt atacatactt ctagaaattt agcaatacga tgccgtctga aacttcgtca
     4441 ttcccgcgaa agcgggaatc tagaatctcc aagttttcag aca
//
LOCUS       DAWGBY010000143         4442 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.143, whole genome shotgun sequence.
ACCESSION   DAWGBY010000143 DAWGBY010000000
VERSION     DAWGBY010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4442
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.143"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(130..1047)
                     /gene="thrB"
                     /locus_tag="WHG62_001879"
     CDS             complement(130..1047)
                     /gene="thrB"
                     /locus_tag="WHG62_001879"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ1725935.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSR
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACWGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(1084..1812)
                     /gene="ubiG"
                     /locus_tag="WHG62_001880"
     CDS             complement(1084..1812)
                     /gene="ubiG"
                     /locus_tag="WHG62_001880"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ1725936.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPADLARMCRQAGLDVVETKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1964..3205
                     /locus_tag="WHG62_001881"
     CDS             1964..3205
                     /locus_tag="WHG62_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ1725937.1"
                     /translation="MPNKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGNALGGNVSLTVGQLVFFGILAFCVWASARLVDRFTGILIGGMVLTF
                     IWATGGLIADAKPSVLFDTQAPTGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRQKFGAGKTYKVYGGLWLMVWVFLF
                     GIINIAAQVLSQMELVPVFKG"
     gene            3345..4402
                     /locus_tag="WHG62_001882"
                     /pseudo
     CDS             3345..4402
                     /locus_tag="WHG62_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT         1049 a         1440 c         1013 g          940 t
ORIGIN      
        1 gtcctgattt ttgttaatcc actataaaat ggaaaatacc cggctatcgt ctcattttcg
       61 ttttaatcag ccataaaaat gccgtctgaa accctttcag acggcatttc tgtcaaacgc
      121 cggacgcact caatccaaac tcaacagcag gttgcggaac gcgttcgggt ctttgataaa
      181 cgtcatctcg cccgcctgcg gaaaatgaaa gtccaacagg cgcgacaccc aaaaacggat
      241 gcagccggca cgttgggcgg tcgggaaata cgccttttct tcggcactca aggggcgcac
      301 gccctcataa ccgccgataa acgccttttt caacgcctca tccaacttat tgtccgccgt
      361 ccttgcccaa tcgttgaccg caatcgccaa gtcatacata aaattgcccc agcaggcata
      421 atagaaatcg atgaaacccg atacctgacc gccgtcaagc aacacattgt ctttaaacaa
      481 atcggcgtgg atgatgcccg aaggcagatg attgccgaga ttgtccttca gcgcatcgat
      541 ttcggaacac agcagcgcgg catcgtctcg cgacaacacg ggcagcagtc gggcgcacgc
      601 ctccgtccac cacgcatcgt aacgcgggtt ttccatttcc aaagggaaat cggcggcggc
      661 aaggtgcatt ttggccagca tcgcaccggt atggaaacac tgctccgccg tcggcagcgc
      721 ggtatccgaa cctttcaggc aggcaaccaa acaagccggc ttgcccgcca aaacggaatc
      781 aagccggccg tctttgcgcg caaccggcgc ggcaaccgcc acgcccttca tactcaaatg
      841 ccggttaagc tccagaaaaa acggcagctc ttcctgtttc aacacttcaa acacggtcag
      901 cacataacgt cccgaagtcg tcgtcagaaa ataattgctg ttggtaatcc cctgcgcgat
      961 gccctgcagg gaaacaaatt cccccaaatc gtaaccgctc aggaagccgc gcatttcatc
     1021 atcggaaaca ctggtataga cagacatatc aactcacttg ctcaaaaacg ggcaaacccg
     1081 ccgtcagaac gccggacggc aggcaaacat ataattcaca tcggtcgaat cgcacagggc
     1141 ataagtttgc gacaacacat ggtaagtcat acccttagtt tccaccacgt ccaaacccgc
     1201 ctgacggcac atccgcgcca aatcggcagg cgcgatgaat tttttccagt cgtgcgtgcc
     1261 tttggggaca aacttcaaca gatattccgc cgccacaatc agatgcaggt acgatttcgg
     1321 gtttttattg atggtggaaa aaaacaccat gccgtccggt ttgaccagct tggcacaagc
     1381 acgtacgatg gcggcgggat cggggacgtg ttccatcatt tccatgcacg ttaccacatc
     1441 gaacgagtgc ggttccgcct cggcaaggtc ttccacgcgg atacattcgt attcgatatc
     1501 ggcgacattg ttcaaagccg cgtgcaggcg ggcggtttcc agcgactgct ccgccatgtc
     1561 gatgcccttt acaaacgccg cgccgcgccg cgccatgctt tccgccaaga tgccgccgcc
     1621 gcagcccaca tccaaaaccc gtttgccgca caaatccgcg tgtccgtcga tataatccag
     1681 ccgcagcgga ttgatgtcgt gcaaggtttt gaactcgccc gacttgtccc accatttgtc
     1741 ggcaatccgg ctgaatttgg cgatttcccc ctcatcgaca ttatattttt tgtcggacat
     1801 tttccctccc atctgacgaa ccgcccactc caaaacccaa gattatacta tggaacacaa
     1861 tgccgtctga aagccttttc gggcgacgag gtgcaaatac cttacaaatc cttacacttt
     1921 acggcataat ggcggcacgc tttttttggc agaaagacaa aatatgccca acaaaacccc
     1981 ttccctgttc ggcggcgcga tgattatcgc cggtacggtt atcggcgcag gcatgcttgc
     2041 caacccgacc gccacatccg gcgtatggtt taccggctcg ctggccgtgt tgctgtacac
     2101 ctggttttcc atgctttcca gcggcctgat gattttggaa gtcaacaccc actatcccca
     2161 cggcgcaagt ttcgacacca tggtcaaaga cctgctcgga cgcggctgga acatcatcaa
     2221 cggcatcgcc gtcgccttcg ttttatacct gcttacttac gcttatatct tcgtcggcgg
     2281 cgacctgacc gccaaaggca tcggcaacgc cttgggcggc aatgtttcgc tcaccgtcgg
     2341 acaactcgtc ttcttcggca tcctcgcctt ttgcgtgtgg gcatccgcac gcttggtcga
     2401 ccgcttcacc ggcatcctca tcggcggtat ggtgctgact ttcatttggg caaccggcgg
     2461 gctgattgcc gatgccaaac cgtccgtcct cttcgacacc caagccccta ccggcaccaa
     2521 ctactggatt tacgccgcca ccgccctgcc cgtctgcctc gcttccttcg gcttccacgg
     2581 caacgtctcc agcctgctca aatactttaa aggcgacgcg cccaaagtgg ctaaatccat
     2641 ctggacgggg acactgattg cgctggtaat ttacgtcctc tggcaaaccg ccatccaagg
     2701 caacctgccg cgcaacgagt tcgcccccgt gattgccgcc gaagggcaag tctccgtcct
     2761 gattgaaacc ctgtccaaat tcgcccaaac cggcaatatg gacaaaatat tgtccctgtt
     2821 ttcctacatg gcaatcgcca cctcgttttt aggcgtaacc ttaggtctgt tcgactacat
     2881 cgccgacatc ttcaaatgga acgacagcgt gtccggccgc accaaaaccg ccgcgctgac
     2941 cttcctgccg cctctaattt cctgcctgct cttccccacc ggcttcgtta ccgccatcgg
     3001 ctacgtcggc ctggcggcaa ccgtctggac aggcatcatc cccgccatgc tgctctaccg
     3061 ttcgcgccaa aaattcggcg caggcaaaac ctataaagtt tacggcggct tgtggctgat
     3121 ggtttgggtc ttccttttcg gcatcatcaa catcgccgca caggtattga gccaaatgga
     3181 actcgtcccc gtatttaaag gataaaagca aaatgccgtt tgaagcccgc cggcggcttc
     3241 agacggcatt gccgcaacaa acggcaaccg tattccggca cacctgcccc tcacgcacaa
     3301 atcccgcccc gacaggcgcg ggacgcaacc ataaaggaac aatgatgaag ctcaaaatag
     3361 atattgcaac caacaacttc aaacacggcg gcggcacgga acgctacaca ttggatttgg
     3421 taaagggtct gaacagacaa aacatcacac cggccgttta tgcgacgaaa tttgatcacg
     3481 gcattcctga atacgcccta atcgaacccc atcttgtcga tcaacaccgg acgctgaaaa
     3541 aactacgctc attcctcttt tcaagccggc tcgctcaaac cagaaaaaac agtgccgcca
     3601 aactgattgc ctgccaccac gccgattacg ccgacctcct catctgcggc ggcacacact
     3661 tgggctacct gcaccatatg gcgcaaaaac cgaacctgct cgaccgcctc gccatacgcc
     3721 gcaaccgcag caactacgcc accgccaaac tgattatggc gcattcccat atgatgcggc
     3781 gcgaactggt cggactgtac ggcgttcccc ccgaaaaaat ccaagtcgcc cccccccccc
     3841 cgcagatacg gaacgcttct ttccacaacc tagagaaact gccgctctgc gcgccaaata
     3901 cggttttgcc gaccatgaaa ccgttttcct atttccatcg accggccaca cgcgcaaagg
     3961 cctggaactg cttgccgact ttttcgaaca taccgacctg cccgtcaagc ttgccgttgt
     4021 cggctccccg ctcccccgcc ctatgaaaaa cgtcgtcgga ctgggcttct gcaccgatat
     4081 gcccgaactc taccgcgccg ccgactttac cattatggcc tccctgtatg aacccttcgg
     4141 gctggtcggt gtcgaatccg tcctatgcgg cacacgcgtc gtcctctccg aaaacatggc
     4201 atgtacagag gtcatgaacg aagaagccgg attctttttc tcacgccaaa acccggaaac
     4261 cctggcgcaa gccgttgccc aagccgtcag ccttaaaaaa cagggcggac accgcctgtc
     4321 cgacccgatg cgtgcactga actacaaccc gtccctgtcg caccacatcg accgactgac
     4381 cgacatactg gcatccgtat aacaaaatgc cgtctgaacg agttttcaga cggcattgct
     4441 gc
//
LOCUS       DAWGBY010000144         4370 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.144, whole genome shotgun sequence.
ACCESSION   DAWGBY010000144 DAWGBY010000000
VERSION     DAWGBY010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4370
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.144"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(69..2045)
                     /locus_tag="WHG62_001883"
     CDS             complement(69..2045)
                     /locus_tag="WHG62_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ1725938.1"
                     /translation="MNEFSLAPIVIVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGETGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WHG62_001884"
     CDS             2194..3033
                     /locus_tag="WHG62_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ1725939.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALARIDESACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQDAAQN
                     TAS"
     gene            3232..4263
                     /gene="gap"
                     /locus_tag="WHG62_001885"
     CDS             3232..4263
                     /gene="gap"
                     /locus_tag="WHG62_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ1725940.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         1105 a         1470 c         1012 g          783 t
ORIGIN      
        1 tgcgatttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg gcggacggtt
      301 tcgccggttt cgccgaatcc tgcctcatca tcactaccga caaacagtcc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccgata cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg taaccaccac cattttcgcc cgtcccagac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagaaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccctgcgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatcc ccgccacaaa cgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacggcacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaacac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccgatgc tgaacatcag gaacacaatc
     1861 ccgatttcac ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaatcacaa taggggcaag cgaaaattcg
     2041 ttcatagacc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgcattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga atccgcctgt atcggctgca ccgcctgtat ccgcgcctgc
     2461 cctgccgatg ccattatggg cgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgtcgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgcgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat acctcaaaca atacaaagcc
     3001 aagcaggatg ccgcacaaaa caccgcctcc tgacccttcc ctgatatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacacc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa ccctcaacaa aggaacgaac catgggcatc
     3241 aaagtcgcca tcaacggcta cggacgcatc ggccgccagg ttttgcgcgc catctacgat
     3301 tatcagattc aagaccaact ccaaatcgtc gccgtcaacg ccagcggtag ccttgaaacc
     3361 aacgcccacc tcaccaaatt cgacaccgtg cacggacgct ttgaagccga cgtatcccac
     3421 gacggcggca acctcatcgt caacggcgac aaaatcccct tcttctcgac ccgcaaccct
     3481 gccgaactgc cgtggaaaga actcggtgtc gatttggtca tggaatgcac cggcgcgttt
     3541 accagcaaag aaaaagccaa aatccacctc gaaagcggcg cgaaaaaagt cctcatttcc
     3601 gcaccgggcg gcgacgatgt cgatgcaacc gtcgtgtacg gcgtgaacga cagcgtcctg
     3661 accgccgaca tgaccgtcgt ttccaacgct tcctgcacca ccaactgcct ctcgccggtt
     3721 gccaaagtgt tgagcgaaag cgtcggcatc gtcaaaggcg cgatgaccac catccacgcg
     3781 ctgaccaacg accaaaccgt taccgacgtg cgccacaaag acctgcgccg cgcccgcagc
     3841 ggcgtggaaa acatgattcc gaccaaaacc ggcgcggcaa aagccgtcgg tttggtactg
     3901 cccgaattga aaggcaggct cgacgggctt gccatccgcg tgccgaccgt caacgtatca
     3961 ttggtagatt tgagcttcca agccgcgcgc gacacgacag tcgaagaaat caacgcactg
     4021 atgaaagccg cctcggaagc aggcgcgctc aaaggcgttt taggctacaa caccctgccc
     4081 ttggtttcca tggacttcaa ccacactacc gaagccagcc acttcgacgc aacactgacc
     4141 aaagtcgttg acggcaacat gattaaagtc ttcgcatggt atgacaacga atggggcttc
     4201 agctgccaaa tgctgaacac cgcacgccgt atgttcggac ttgaagtgcg cccgctcaaa
     4261 taagcaataa accgtcaaac aaaatgccgt ctgaaacccg atgttttcaa gttccagacg
     4321 gcatttttca tttttcaccg tgattttacc cggctgtcgt catttctaat
//
LOCUS       DAWGBY010000145         4358 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.145, whole genome shotgun sequence.
ACCESSION   DAWGBY010000145 DAWGBY010000000
VERSION     DAWGBY010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4358
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.145"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(160..2088)
                     /gene="dnaK"
                     /locus_tag="WHG62_001886"
     CDS             complement(160..2088)
                     /gene="dnaK"
                     /locus_tag="WHG62_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ1725941.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2296..2568)
                     /locus_tag="WHG62_001887"
     CDS             complement(2296..2568)
                     /locus_tag="WHG62_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725942.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2754..3440
                     /locus_tag="WHG62_001888"
     CDS             2754..3440
                     /locus_tag="WHG62_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1725943.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3572..3910
                     /gene="erpA"
                     /locus_tag="WHG62_001889"
     CDS             3572..3910
                     /gene="erpA"
                     /locus_tag="WHG62_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ1725944.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3927..4073
                     /locus_tag="WHG62_001890"
     CDS             3927..4073
                     /locus_tag="WHG62_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725945.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTVGTVSGV
                     FVPL"
     gene            4070..>4358
                     /locus_tag="WHG62_001891"
     CDS             4070..>4358
                     /locus_tag="WHG62_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEZ1725946.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITRRYSGLTKTSTALSR"
BASE COUNT         1002 a          874 c         1150 g         1332 t
ORIGIN      
        1 actatataaa aaatttccag agaaccgata caacagttgg aacttgggtt tgggaatatt
       61 acggtagatg aacttggaac ctctgttatg ctatggtctt ttatctcaat tgaaaaaagc
      121 gcgaatcaaa cggttcgcgc ttttttcaga cggtattaat tattttttgt cgtcttttac
      181 ttcttcaaag tcggcatcta cgacatcatc gtctttcttt gcagaagcat tggcttgttc
      241 gctttcgcct gcttgggctt cagcttgtgc ttgagcgtaa accatttccc ccagtttttg
      301 gctggctgcg cccagcgcct cggttttggc atcgatagcg gctttgtcgt cgcctttaac
      361 tgcttcttcg gcttctttca gcgcggcttc gattttttct ttctcggctg cgtcgagttt
      421 gtcgccgtag tcggccaaag attttttcac agagtgaatc agggcttcgg cttggttgcg
      481 ggaagcgacc aattcagtca gttttttatc ttcctcggca ttggcttcgg catctttcac
      541 catgcgttcg atttcttctt cgctcaaacc tgaagaacct tggatggtga tgttggctgc
      601 tttgccagtg cctttgtctt tggcggaaac gtgcaggata ccgttggcgt caatatcgaa
      661 ggtgacttcg atttgcggca taccgcgcgg tgcgggtgcg atgtcgccca agttgaactg
      721 acccaaagat ttgttggcag aagcgcgttc gcgttcgcct tgcagtacgt ggatggttac
      781 tgcgctttgg ttgtcttcgg cggtagagaa cacttgcgac gctttggtcg ggatggtggt
      841 gttcttttga atcagcttgg tcatcacgcc gcccatggtt tcgataccca aggacagagg
      901 ggttacgtcc agcagcaata cgtcgctgcg gccgccgctt aacacttcgc cttgaatcgc
      961 tgcgcctacg gcgacagctt cgtcagggtt cacgtctttg cgcggctctt tgccgaagaa
     1021 gtctttaacg gcttcttgta ctttcggcat acggctttga ccaccgacca aaatcacgtc
     1081 gtcgatgtcg ccagtgctca gaccggcatc tttcaatgcg gtgcggcaag gctcgataga
     1141 gcgggcaatc aggtcttcaa ccaggctttc gaatttggcg cgggtaattt tcatcgccaa
     1201 gtgtttcggg ccggttgcgt ccatggtgat gtacggcagg ttgatttcgg tttgctggcc
     1261 gctggacaat tcgattttgg ctttttcggc agcttctttc agacgttgca gagccatgac
     1321 gtcttgtttc aaatcaatgc cttgttcttt tttaaactcg tcaatgatgt agtcgatcaa
     1381 gcgttggtcg aagtcttcac cgcccaagaa agtatcgccg ttggtagcca atacttcaaa
     1441 ttgtttgtcg ccgtcgaggt tggcgatttc gatgatggaa atatcgaaag taccgccgcc
     1501 caagtcatat acggctactt tgcggtcttt gttgtcgcct ttgtccatac cgaatgccaa
     1561 agcggctgcg gtcggctcgt tgatgatgcg tttcacgtcc aaaccggcga tacggcctgc
     1621 gtctttggta gcttgacgtt ggctgtcgtt gaagtaggca gggacggtaa tcacggcttc
     1681 ggttactttt tcgcccaagt aagcttcggc ggcttctttc attttacgca ggacttctgc
     1741 ggaaatttga ggaggagaca gctctttgcc ttgtgctttt acccatgcgt cgccgttgtt
     1801 ggctttgatg atttcgaaag gcatagattc gatgtcgcgt tggacttctt tgtcttcaaa
     1861 tttgtggccg atcaggcgtt tggcggcgta aatggtgttt ttagcgttgg ttacggcttg
     1921 gcgtttggca ggcgcaccga cgaggatttc gccgccgtcc aaataagcga taacggacgg
     1981 cgtggtgcgt gcgccttctg cgttttcgat cactttggtt tgaccgtttt cggaaatggc
     2041 caaacaagag ttggttgtac ctaagtcgat accgattact tttgccatgt ggataatcct
     2101 atttgatttt gcttattttg agaaatatgt tggaacattt tgtcccgatg ggctgtaaat
     2161 agggcgggcg gcgggctgtt tcaagctaca gcatggctat aagtatataa ctttatgaat
     2221 atattggttt tatatttgat ttaatacatt tggctccaat gcatttaagc ataatatttc
     2281 aaatggcagg caggtttatt catagacgat gccggcgagc atttcctgtt cgttcaagtt
     2341 gccgtactct ttttcccagt cgtgtgaaga ctcgatgatg tcgcattctt tggaaaggga
     2401 gacttgttct gcatccatat ctttggcgtt cagtatgttg aattgttcgc acagggatgc
     2461 ggataaagtg atgtcaggct gtttggcttc agaacggttt tcttggaagg caaagcagaa
     2521 tgcggtaaat gccgcagcat agataagata tttgccggtt ttcttcattt tctatccttt
     2581 ttctgtcaac tcaggattaa acctatggaa aatcttaaaa attatgtatt gagtaagaaa
     2641 aatcataatt taaatttagt ttatcatagt tgttccgttt ttgggatagc taaggtaaaa
     2701 tatatttcat gtttacttta gatgattgaa tgaaggggag cggaaggata tttatggaaa
     2761 cctttaaaga cagactggtt tttttatgga aaagcgaagc gaagcaggca aaaatcgcat
     2821 ccgatattga aatgacgatt gcgggcttca gcaggatatg gaatgaaggc ggtctgccga
     2881 agtctgaaac attaaaaaaa atcaagcagt tgaaggggtg tagtatcgat tggctgctga
     2941 ccggggaggg taatccgttt ccggatgaag ccccaaaaaa atcccttgct tacgatacct
     3001 tgggaaatga agtcgatacg gacgagtttg tctttgtgcc gagatatgat attcgggcgg
     3061 ctgcgggata cgggcagttt gtcgatcatg aggaaccggt atttacaatg gcgttcagac
     3121 ggcattggat tgagaattat gttacccgcg atacgaaaaa cctgtctgta atttccgtca
     3181 agggggattc gatggagggg gttttgaatg acggcgattc gattttggtc aatcatggtg
     3241 aaaatacgcc gagggacggt ctgtatgtgt tgcggattaa tgaaaatctg ctggttaaac
     3301 gtttacagat tgtaccgggc gggattatca atgtgatttc tgcaaacgag gcttatcctg
     3361 cttttgaaat caatttgaac gatttgaccg atgatgtgga gattatcggg cgtgtcgagt
     3421 ggttcggcag gacgatttga gtttggggct tgaaattgca ggcggtcaaa cttatctatt
     3481 ggaacaattc ctttttcaaa ggcgaagcct gcttgccttt aaagggggtt tgagagagaa
     3541 tgcagaaaat attatattaa ggaataacac catgtcggat gaaagcccta ttatttttac
     3601 tgacagctgc tgtgccaaag ttgccgattt gattgccgaa gaaaacaatc ccgatttgaa
     3661 attgcgggtt tttgtcaatg gcggcggctg ttcgggtttc cagtacggat ttacttttga
     3721 cgaaatcaaa aacgacgacg attttgaaat tgagaaaaac ggtttggtct ttttggtcga
     3781 tccgatgagc tatcaatatc tggtcggtgc ggaaatcgac tatacggaaa gtttgcaggg
     3841 ttcgcaattc gtcatccgca atccgaatgc ggaaacaacc tgcggttgcg gatcgtcgtt
     3901 ttccgtatga ccgcttggtt tgtgtgatgc cgtctgaacg ttcagacggc atttttactt
     3961 ttggaaaata tattatcggg atgaattcac atataatccg attgtttgaa gatgaatcgg
     4021 gtttcccgaa aggaacggtc ggaacggtat caggcgtatt tgttccctta tgattgagat
     4081 gagtaaagat taccgaaatg atttgtacga tgtatatgtt tcttacccgc cccaagtgga
     4141 tcgcgggctt atccgggagt gcctcaggga gaatctcggc gaggaaaagg cggaaggatt
     4201 gatcgaatcg ctcgattcca aacctcaagt gctggttgag gaaaaatgca cttgggcgaa
     4261 acgggaagag ttgcacgatt atttcagcta tttgggtttg gatattatta cccggagata
     4321 tagtggatta acaaaaacca gtacggcgtt gtctcgcc
//
LOCUS       DAWGBY010000146         4354 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.146, whole genome shotgun sequence.
ACCESSION   DAWGBY010000146 DAWGBY010000000
VERSION     DAWGBY010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4354
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.146"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            244..981
                     /locus_tag="WHG62_001892"
     CDS             244..981
                     /locus_tag="WHG62_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ1725947.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHAQSDIGRELIRED"
     gene            983..1669
                     /locus_tag="WHG62_001893"
     CDS             983..1669
                     /locus_tag="WHG62_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ1725948.1"
                     /translation="MADLTFQQAVSTIVGMKDEIFRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPIA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPIAIVCKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSIG
                     NALARKLDKR"
     gene            1828..2691
                     /locus_tag="WHG62_001894"
     CDS             1828..2691
                     /locus_tag="WHG62_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725949.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAAKKE
                     IVFGTTVGDFGDMVKEQIQVELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2753..3322)
                     /locus_tag="WHG62_001895"
     CDS             complement(2753..3322)
                     /locus_tag="WHG62_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ1725950.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3480..4340
                     /locus_tag="WHG62_001896"
     CDS             3480..4340
                     /locus_tag="WHG62_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ1725951.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
BASE COUNT         1064 a         1366 c         1076 g          848 t
ORIGIN      
        1 ttcaattatt tgccgtttta gtgcgaaccg ctgcctttgc ctgtttcaga cggcattgtc
       61 cgaaatggtt gcccgcttcc tgccttattg acaaaaaaac gctttcccga taatatccta
      121 cgaaaattaa cctgccgatt tgacacagct tgcgggcata acagctaaag cgttccgaca
      181 atttcagctt tatcttccgc gcccgttgtg tccgacatcg ggctttgttg tatgggaaag
      241 acaatgatta ttttggacaa ggtttccaag cattaccaaa cgcgcgacaa gacccgtttt
      301 gccgccgtcg agccgaccag cctcgaaatc cgcgacggcg aaatcttcgg gctgatgggt
      361 tattcgggtg caggcaaatc caccctgttg cgcctgatta acctgttgga acgtcccgac
      421 agcggcaagg tcaacgtctg cggacaagag ctgaccgcgc tcgatgccgc cgcattgcgt
      481 caggctcggc agaatatcgg catggtgttt cagcagttca acctgttgaa caaccgcacc
      541 gtcgccggca acgtcgcctt cccattggaa atcgccggat ggccgtctga aaaaatcaaa
      601 gcgcgcgttg ccgaatgtct cgaaatcgtc ggactgaccg aacgcgccgg ccactatccc
      661 gcccagcttt ccggcgggca gaaacagcgt gtcggcatcg cccgcgcact cgcgcccaaa
      721 ccccaagtca tcctcgcaga cgaacccact tccgccctcg accccgccac cacgcgcagc
      781 gtcttggaat gtttggaaga catcaacaaa cgcttcaacg taaccatcgt catcgtaacc
      841 cacgaaatga gcgtcatccg ccgcctgtgc gaccgcgccg ccctcttgga taaaggcaaa
      901 gtcgtcgaaa tcgtcgaagt acgcggcaac caaatccacg cccaatccga catcgggcgc
      961 gaactgattc gggaggactg atatggcaga cttaacattc caacaagccg tttccaccat
     1021 cgtcggcatg aaagacgaaa tcttccgcgc cttgggcgaa accttcgtga tggtcggctt
     1081 gtccaccaca ttcgccgtcg ttttcggcac gctgctgggc gtgttgctct tcgtaacctc
     1141 cagccgccaa ctgcattaca acaagccggt gaacttcctg ctcgacaacc tcgtcaacct
     1201 catgcgcgcc ttccccttcg tcattttgat gattgcgatg atacccgcca cacgcgccat
     1261 cgtcggcagc accatcggcc cgattgccgc ctcgctggtg ttgagcgtgt cgggattgtt
     1321 ttacttcgcc cgactggtgg aacaaaacct gcgcgaagtc cccaaaggcg tgattgaagc
     1381 cgccgccgcg atgggtgcgc ctccgattgc catcgtctgc aaagtcctct tgaacgaagc
     1441 gcgcgcgggc atggtttcca gcattaccgt gcttgccatc gggcttttgt catacagcgc
     1501 ggcggcaggg atgataggcg gcggcggctt gggcgacctc gccatccgct acggctacta
     1561 ccgctaccaa accgaagtca tcgtcttcat cgtcgccctc ctcgtgctgc tcgttatcct
     1621 gattcaaagc atcggcaacg cgttggcgcg gaaactcgac aaacgttgaa cccgaatgcc
     1681 gtctgaacgc caaaaccccc accgctatcc gaaaaatgct ataaaatccc cctgttcgcg
     1741 gcaaatgccg tctgaacgcc gaatccggac ggcaggactc cctgcccgtc atttttgttt
     1801 gaaactgcca caacatcagg agaaaatatg aaaaccttct tcaaaaccct ttccgccgcc
     1861 gcactcgcgc tcatcctcgc cgcctgcggc ggtcaaaaag acagcgcgcc cgccgcatcc
     1921 gcttctgccg ccgccgacaa cggcgcggcg aaaaaagaaa tcgtcttcgg cacgaccgtc
     1981 ggcgacttcg gcgatatggt caaagaacaa atccaagtcg agctggagaa aaaaggctac
     2041 accgtcaaac tggtcgagtt taccgactat gtacgcccga atctggcatt ggctgagggc
     2101 gagttggaca tcaacgtctt ccaacacaaa ccctatcttg acgacttcaa aaaagaacac
     2161 aatctggaca tcaccgaagt cttccaagtg ccgaccgcgc ctttgggact gtacccaggc
     2221 aagctgaaat cgctggaaga agtcaaagac ggcagcaccg tatccgcgcc caacgacccg
     2281 tccaacttcg cccgcgtctt ggtgatgctc gacgaactgg gttggatcaa actcaaagac
     2341 ggcatcaatc cgctgaccgc atccaaagcg gacatcgccg agaacctgaa aaacatcaaa
     2401 atcgtcgagc ttgaagccgc gcaactgccg cgcagccgtg ccgacgtgga ttttgccgtc
     2461 gtcaacggca actacgccat aagcagcggc atgaagctga ccgaagccct gttccaagaa
     2521 ccgagctttg cctatgtcaa ctggtctgcc gtcaaaaccg ccgacaaaga cagccaatgg
     2581 cttaaagacg taaccgaggc ctataactcc gacgcgttca aagcctacgc gcacaaacgc
     2641 ttcgagggct acaaatcccc tgccgcatgg aatgaaggcg cagccaaata aggcagtcgt
     2701 ataaaatgat gccgtctgaa ccgtatccgt gttcagacgg catttttgtc ctttaatccg
     2761 ccattccctg ccattccgcc gaatccggcg tatcgattcc gaacagcgac aaagcgtgtg
     2821 caacactgtg cgccactatg tcgtccgccg tctgcggttt gcggtacatc gcaggaacag
     2881 ggggaaacac cacgccgccc atttccgtta cccgcttcat attgtccaaa tgggcaaggt
     2941 tcagcggcgt ttcgcgcacc atcagcacca gccgccgcct ttccttcaaa accacatccg
     3001 ccgcacgcgt caagaggttg tcgccgaagc cgtgcgcgac cgaggcaagc gtccgcatcg
     3061 aacagggggc gaccagcatc ccgtccgttt taaacgtacc gctggcaatg cacgccccga
     3121 tattgccgat cggatgcacg aagtccgcca aggcatatac ctcgtctctc gcataagccg
     3181 tttccgaagc gcgcgccatc tccgcacctt tcgataccac aaggtgcgtt tcgatatctt
     3241 gcgcgcgtaa aagttccaaa gccttcacgc cgtattggaa accgctcgcc ccactgatgc
     3301 cgattatcaa acgccgtacc atcatccgcc tttcccataa aaccgcctgc aacggcaaac
     3361 cggctattat agtgaaaaaa cagaaatccg ataaatacgg atacaaattg tcggcaacac
     3421 ccaatatccg ataaaatatc cgatttaaca tcctatctga ataggcacgg gagggcggta
     3481 tggcaaaagt aaaaggcgga ttggggcgcg gtttggattc gctgctcgcc aacggcgcag
     3541 acaacagcag cggcgaccga ttgaccacgg ttgcggttaa agatatccgg cccggccgct
     3601 atcaggcgcg tgttcaaatc gatgacgaag ccttgcagga gctggcagat tcgattaagg
     3661 cgcaaggcgt gatacagccc gtcatcgtgc gcgaacacgg actgtcccga tacgaactga
     3721 ttgcggggga gcggcgttgg cgtgccgcac agattgccgg cctgaccgaa atccccgccg
     3781 ttatcaaaac catcagcgac gaaaccgcgt tggcaatggg tttgatcgaa aacctccagc
     3841 gcgaaaacct caaccccatc gaagaagcac aaggcttgaa acgccttgcc gacgagttcg
     3901 gactgaccca cgaaaccatc gcccaagccg tcggtaaaag ccgaagcgcg atttccaaca
     3961 gcctgcgcct tttaagcctg cccgaacccg tgcaggaaat gctttaccaa cgccgcctcg
     4021 aaatggggca cgcccgcgca ctgctgaccc tgcccgtcgt cgaacagctc gagttggcgc
     4081 aaaaggccgt caaaaacggc tggtcggtgc gcgaagtcga acgccgcagc caagccgccc
     4141 ttcaaaacaa acgtcccgag cccaaaaaaa ctgccgccgc cgacatcggc cgcctgaatg
     4201 atttgctgac tgaaaaactg ggtgtcaacg ccgaaatcaa aaccgccaac cataaaaaag
     4261 gcagaatcat cctgcatttc gacacgcccg aaaccttcga ccatatcttg aagcaattgg
     4321 gcatagatta ccgaccttaa ttttgcggga tata
//
LOCUS       DAWGBY010000147         4249 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.147, whole genome shotgun sequence.
ACCESSION   DAWGBY010000147 DAWGBY010000000
VERSION     DAWGBY010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.147"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..128)
                     /locus_tag="WHG62_001897"
     CDS             complement(<1..128)
                     /locus_tag="WHG62_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ1725952.1"
                     /translation="MKEYKVVIYQESLLSSLFFGATKVNPVNFSAFLNKQTPEGWRV"
     gene            complement(203..1546)
                     /gene="argG"
                     /locus_tag="WHG62_001898"
     CDS             complement(203..1546)
                     /gene="argG"
                     /locus_tag="WHG62_001898"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ1725953.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIEPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKK"
     gene            1671..2471
                     /locus_tag="WHG62_001899"
     CDS             1671..2471
                     /locus_tag="WHG62_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ1725954.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALDLPVVRHPEAAKFIEG
                     ITQKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLNTYYADRFNQTERGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            2511..3497
                     /locus_tag="WHG62_001900"
     CDS             2511..3497
                     /locus_tag="WHG62_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ1725955.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            4153..4249
                     /locus_tag="WHG62_001901"
                     /pseudo
     CDS             4153..4249
                     /locus_tag="WHG62_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         1017 a         1087 c         1166 g          979 t
ORIGIN      
        1 acccgccagc cttcgggggt ttgtttgttg aggaacgcgc tgaaattgac ggggttgacc
       61 tttgtcgcgc cgaaaaacag gctggacaac aggctttcct gataaatgac gactttgtat
      121 tctttcatag gattcctttt aacataaggg atcatctttt cagacgaccc cttaagttgc
      181 taatgatgca aaacagcaaa ccttatttct tattgcccaa ctgcggcaat accgagcctt
      241 cgcccagcga gagcaaaccg ctttgcgagt agatacccag tttggcgcgg gtgtcggtga
      301 tgtcaaggtt gcgcatcgtg agctgtccga tgcggtctag cggggtaaac gccgcacctt
      361 cgactttttc catactcagg cgttcgggtt ggtaggtcag attgggcgat tcggtgttca
      421 gaatcgagta gtcgttgccg cgccgcagtt cgagggtaac ttcgccggta acggctttag
      481 cgacccagcg ttgggcggtt tcgcgcaaca tcagggcttg gctgtcgaac cagcggcctt
      541 ggtagagcaa acgtccgagg cgcaggccgt tgatgcggta ttgttcgatg gtgtcctcgt
      601 tgtggatgcc ggttaccaag cgttcgtagg cgatgtggaa caacgccatt cccggggctt
      661 cgtagatgcc gcgcgatttg gcttcgatga tgcggttttc gatttggtcg ctcataccca
      721 gaccgtggcg gccgccgatg cggttggctt cgaggaagag ttcgacggga tcagcgtatt
      781 ctttgccgtt cagtgcaacc ggcacgcctt cttcaaagcg tacgctgact tcttcgggtt
      841 cgatttcgac gttttcgtcc caaaaggcaa cgcccataat gggtttgacg attttgatgc
      901 ctgagttcaa aaattccaag tctttggctt cgtgggtggc acccaacata ttggaatcgg
      961 tggagtaggc tttttccacc gacattttgt agttgaagcc gttggcaatc agaaattcgc
     1021 tcatttcgtg acggccgccg agttcgtcga taaattgctg atcgagccag ggtttgtaga
     1081 ttttcagcgc gggattggtg agcaaaccgt agcggtagaa acgctcgatg tcgttgcctt
     1141 tgtaggtgct gccgtcgccc caaatattca catcgtcttc tttcattgcg gaaacgagca
     1201 tggtgccggt cacggcgcgg cccagaggcg tggtgttgaa ataggcgatg ccgccggtgg
     1261 aaacgtggaa cgcgccgcat tggatggcgg cgatgccttc atgtgccaac tgcgcgcggc
     1321 agtcgattaa gcgggcgttt tccgcgccgt attccatcgc ttttttagga atggcgttgt
     1381 aatcgtcttc gtcgggctgg ccgaggttgg cagtgtaggc ataaggcagc gcgcctttga
     1441 gtttcatcca caacagcgcg gcggaggtat caagtccgcc ggagaaggcg atgccgactt
     1501 tctgaccgac ggggagattt tgtaaaatag tatggttttg gttcatgaaa aaatcctcgg
     1561 tagcttgaaa aatcaaagcc attatcttat aaataggaaa tattgtcagc catcatgccg
     1621 tctgaacggg tattccgccg tttcaggcgg tatttaaaac cgaaaacatt atgaacgcgt
     1681 tcaacctcat catcatcggc gacgaaatcc tgcacggcag ccgccaagac aagcatttcg
     1741 cctttttcaa atccctgctc gaatccaaag ggctgaagct caatcaggtg caatatctac
     1801 ccgacgaacc cgatttactg gtcaggcaac tgcgccgcag cttttcagac ggcataccga
     1861 cgtttgttac cggcggcatc ggcgccacgc ccgacgacca cacgcgccaa gccgcggctg
     1921 ctgctttgga tttgcctgtc gtccgccatc ctgaagccgc caagtttatc gaaggcataa
     1981 cccagaaacg cggcgagccg cttgattcgc cggaacacgc ccaacgcctg aaaatggcgg
     2041 atttccccga gggcgcagag cttgtgccca acccgttcaa caacatcgcc ggattttcca
     2101 tccgcgagca ttatttcttc cccggctttc ctgtgatggc gcacccgatg gcggaatggg
     2161 ttttgaatac ttattacgcc gaccgcttca accaaaccga acgcggcagc cgcagcgtgt
     2221 atgtgtttga gcagcccgaa tcgcgcatta cgccgcttat ggagcatatc gagcaaactt
     2281 atcccggtgt gcgttcgtac agcctgccca gcgtcggttg gacgcattca gacggcacgc
     2341 aggtcaaacc gcacattgag ttcggcatca aagccgaagg agaagccgtc aaccttttgg
     2401 acgcggcgtg ggcggaagtg ttgcacagct tggacggatt gggagcagag ctgaaaaatc
     2461 gggtaaactg aaaaccgttt gcccaaatcg gacaatattt aaggaaaacc atgcaatacc
     2521 gaatcagaag agaaaacgaa gcacccgaag caaaaaatgc gggggaaacc ttatgggagc
     2581 gcgacatcat gcgcgaagtg ctgctgtccg cctatcagga caggcgcagg gagcggatgt
     2641 ggaaaaacat ctggcgcgcc gtcagcaccc tgattctggt tgccctgatt gcaggcattt
     2701 tccgaaaaga cgaagccgca ttgcagttgg cgggcaatac gccgcatacc gcagtcgtca
     2761 acctgtacgg cgaaatcggc aacggtgtag aagaccaggt caaaaaactc aaagacggta
     2821 tggaggccgc ctacaaaaac ccgcaggcaa aagccatcat catccgcgcc aacagtccgg
     2881 gcggctctcc cgtcgtatcc aatactgcct ttgaggaaat acgccgtctg aaagcgcaac
     2941 atcccggcat tcccgtttat ctcgtggcgg aagatatgtg cgcgtccggc tgctactaca
     3001 tcgcggcggc ggcggacaaa atctatgccg acccgtccag catcatcggc agcatcggcg
     3061 ttatcggcag cagtttcgac gcgaccggcc tgatggaaaa aatcggcgtg aaacgcaggg
     3121 ttaaaattgc aggcagcaac aaaggcatgg gcgatccgtt ttcgcccgaa acgcccgaac
     3181 agtcgaaaat ctgggaagaa atgctgaccg gcatacacgg cgagttcatc aaagccgtca
     3241 aaaccggacg cggcgaccgc ctcaaattcc gacaatatcc cgacgtgttc agcggtcgcg
     3301 tgtacacagg cgcggatgcg ctgaaagtcg ggctggtgga cggactcggc aatatttaca
     3361 gcgtggcgcg agacgtggtc aaagcccccg atgtggtgga ttacactccg aaggacgatt
     3421 tcggcagaat cttgggcaga cgcttcggcg cagaactcaa agcaagcgtg cgcgaagccc
     3481 tgcaggccgt ccggtagcgt tgtttacagt atttctaagg gaataccaaa ataaaaatat
     3541 acacaaaaac actcacctcc ccagtatgct gccactaagt cagccgcgtc actatttacc
     3601 gtgcacttaa agccgtaaaa ggcaggttgt cccgggaggt tttgttcatc ctgataccga
     3661 tcggttgttg ttgctcaaag gacagaaggc cgccgataaa cgagattacc tgtttgtcgc
     3721 tattgacgat ttttatactc tgccattttg ccggacaaaa ccgcagacag tgctgccaag
     3781 tttctgaccg aacatctggc tgacccctgc ttgtacctga ttgagtacgt ttactctgac
     3841 aatgataggt aatataaaga gccgtccaac atgctttcgg tgcagcttgt tataataatg
     3901 ggattggttg gaggcttgcc cgatttgctt gtccgcagac caacggtaag gcggagcggg
     3961 ttatccgtac cttgatggag atgtggcatg aggaacagtc gtttgacagt ccggaacatc
     4021 ggcaaaagga gttgtgctgc tttattaatt taggggctgc cctagatcac tagggaaatt
     4081 caaattaagt tagaattatc cctatgagag aaagtcgtct aagccggtat aaacaaaata
     4141 aactcatttt gttatcgtgg ctatgatgta ttggatgcgg gcgaatttag ccatttccgt
     4201 atcaatcaca gcacacattt tgccgaacga caaaaccata ttaatggaa
//
LOCUS       DAWGBY010000148         4138 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.148, whole genome shotgun sequence.
ACCESSION   DAWGBY010000148 DAWGBY010000000
VERSION     DAWGBY010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.148"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(189..392)
                     /locus_tag="WHG62_001902"
     CDS             complement(189..392)
                     /locus_tag="WHG62_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEZ1725956.1"
                     /translation="MELGYTPYNLRNRCKLIQAELAQIVGVKHYIQVGRWEAEPDTET
                     RRADMPLEKWRQFLDWTEKTNAV"
     gene            complement(404..685)
                     /locus_tag="WHG62_001903"
     CDS             complement(404..685)
                     /locus_tag="WHG62_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725957.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(723..926)
                     /locus_tag="WHG62_001904"
     CDS             complement(723..926)
                     /locus_tag="WHG62_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725958.1"
                     /translation="MNIIEQEMKHSSLRKVDVEIAKIIADAHKINAESVKIAQESRWY
                     PMMAATGLVTAIAAVLALIFKFA"
     gene            complement(1006..1578)
                     /locus_tag="WHG62_001905"
     CDS             complement(1006..1578)
                     /locus_tag="WHG62_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEZ1725959.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            1557..1868
                     /locus_tag="WHG62_001906"
     CDS             1557..1868
                     /locus_tag="WHG62_001906"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725960.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSGLSSVLPASLRRLRVGLMLTASSLRYSVARLMPNSCACCLRYAERAPRPIAS
                     A"
     gene            complement(1890..2765)
                     /locus_tag="WHG62_001907"
     CDS             complement(1890..2765)
                     /locus_tag="WHG62_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HEZ1725961.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHEISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2810..3100)
                     /locus_tag="WHG62_001908"
     CDS             complement(2810..3100)
                     /locus_tag="WHG62_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ1725962.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3112..3291)
                     /locus_tag="WHG62_001909"
     CDS             complement(3112..3291)
                     /locus_tag="WHG62_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001510316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ1725963.1"
                     /translation="MYGYTVEKLKENFAKNGQTLAQWARENGFKPRDVYLVIGGQRKG
                     NYGKGHEIAKKLGLK"
     gene            3405..3782
                     /locus_tag="WHG62_001910"
     CDS             3405..3782
                     /locus_tag="WHG62_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ1725964.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            3811..4056
                     /locus_tag="WHG62_001911"
     CDS             3811..4056
                     /locus_tag="WHG62_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725965.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
BASE COUNT          839 a         1026 c         1113 g         1160 t
ORIGIN      
        1 agccgaaatc ctgtgtttgg gtttcggctg tcgggaggga aaggaatttt gcaaaggtct
       61 cagagtgagt ttattttggg gcggcggcag gtcgggggca agcggcgtgg ggcttggttg
      121 tggtttttag gtttgggggt gggtaaaaaa tgccgtaccc ggcgggcagg cttcgcactc
      181 tgaaggtttc agacggcgtt tgttttttct gtccaatcga ggaactgccg ccatttttcc
      241 agcggcatat cggcccgccg cgtttcggta tcgggttcgg cttcccagcg gcctacctgt
      301 atgtagtgct tcaccccgac gatttgcgcc aactcggcct gtatcagttt gcagcggttg
      361 cgcaggttgt aaggtgtgta gccgagttcc atgtcgttgc ggtttatttt gtttcgcata
      421 tttttttgac tgcccggcgg caggtttcgg taaggacggc ggcaaatcgg gcttcgtctg
      481 ccggttttcc gtcgaaaaaa ataaaatcgt aaagggtgat gccgttttcg gaatggcggt
      541 aatgcccgcc cgggcattcg ccgtctgtct gcctgtggat tttggcaatc aggcggggat
      601 agcggcaatg ggtaatgaaa cggcttgcgc cgtcttgccc gataatccat tcggggtagc
      661 ggttgaatag tgcggctctg ttcattttgt tcgggggata aagcctctcg cggggcttgt
      721 ggtcaggcaa atttgaatat cagtgccaac acggcggcga tggcggtaac cagcccggtg
      781 gccgccatca tgggatacca tcgggattct tgggctattt ttacggattc ggcgttgatt
      841 ttgtgcgcgt ctgcaatgat tttggcgatt tcgacatcta cttttctcag actggagtgt
      901 ttcatttctt gttcgattat gttcatcgta cttcctttcg tttttggcgg ttgccgccgc
      961 ttgtcggatg gtaggatgtc tgccatgtgt atatattgat accttttagg ttttattgca
     1021 agtgttttgg gcggcggctt cgtatgcttg gcggtggcgg cggctgtacc attcggcgag
     1081 ttcgcgccgc tcttggaggc ggtagctgtc ggcggtcagg tagtggtgca ggcttgagaa
     1141 gccggcgcgt tggagggcgg cgcggctgat gtggccgagg gcgaggtctg ttgtgagggt
     1201 gtcttttccg gcggtcaggc tgatgttggt gaagaggtgg cggaatccgt gcattgtgtg
     1261 tttggatttg ccgggggtgc tgccgtcata gcccagtcgt cggatggcgt tgtgggcgaa
     1321 tttgatgctg atgtggtcgg gatggggggc gggtttgcgc cgtgggcgga tgcctgggaa
     1381 aaggtggatg ttgtcgccgg tctgtgtgtg cagctctcgg agtatttcta ctgcccagtc
     1441 cgacagtggg acggtaaagg ggtgtttggt cttcatgtcg gcggcgggga tgtgccataa
     1501 ccgggcggtg aggtcgatgt cttgccagcg ggcggaaagc agtgcggagg gacgggatga
     1561 cttccccggt ttccccatca atccgcgccg cctcgatttt tccgttggcg cgcagcattt
     1621 ccaccgcctg ccgcaccgac atcaaccgct tgccgttgcg cctcatcgcc tccaccaaaa
     1681 ccgccgaaat caatttggct tcttccggtt taagctccgt cttgcccgca tcgctgcgcc
     1741 gtttgcgcgt cggcttgatg ctgaccgcct ccagcttgcg gtatagcgtg gcaaggctga
     1801 tgcccaattc ctgcgcctgc tgcttaagat atgcagagcg tgcgccgcgt cccattgctt
     1861 ccgcctgatt ctcgactgcc ttaagacgct caatcattgc cggattcatc gccttctccc
     1921 gtttcaccgc ccaaccattc cggcacattg tctgtcggtg cttcagtcgg cagggcatag
     1981 ctttcgcgca gttgctcgca gtccaaaata atttgattga gcgtgccgac catctttgcc
     2041 tgatggctga tctcgtgtgc ctcactgtgc gcattaagtt ggtcgaacaa atctttcaaa
     2101 cggctcactt gactgcggat accgacctca aggcttgtta actgcatcgc caactcactg
     2161 cccacgtctt ccgccttcgg ctctctgaca acggtttgct tcttagccag cttctcggcc
     2221 agctcatcaa ttttggctgt tttggttttc atcacttcgt ctttggcggc gaggttttcg
     2281 cggctttcgc gcagggcgac gcgcagctcg cgcaccgtca ttcggtccac atcgtcaaag
     2341 gtcatgccgt tgacttcttc cccttcggcc aaacccacca gcgtaacgtc ttcttcgacc
     2401 agcagctcaa gcagcttcga cttgcccaaa tccatcagct tcggcgcggc tttctgcatt
     2461 tgcggggtcg caaagcggcg agtggctgac atcagacgtg atgtttctgc gatacccagc
     2521 ccaaattggc ttttcacaat ttccataaac cgtccgtgtt ccgtatgctc ttttaaaata
     2581 atcagcgcac gtcccagttc gaacatgcct tccatcgtct gccgtactgc ttgacgaccg
     2641 cgttcaaccc aacgctcttc gctataagtc tcgccgttac cccactgctc catcaccagc
     2701 acactgcgca tcgctgcctg attgcttact ttgtcggttg cgataatttc aatttctgta
     2761 ttcatttttt atctccaaag tttccgacgt cggaaacttt caaaatccgt taatccacat
     2821 cgacccgctt gccgatttcg gcaatcttgc tttgcagccg ttcatgctgc tgcctgaacc
     2881 gctctgcgat ttgcagggtt ttgatgccgt aggcgtagtt gccgttttca agtttgatga
     2941 ccaatcccga ggcaaccaaa tcatcaatat ccctgctgac ttgcgatggc gtcagcccca
     3001 gtccgaccga taaatcctta ttgctcagac cgataatcgg atgctcgtca agcgcgataa
     3061 agaccctcaa tagccgttgt acccttttac tttctgccat ccgcatcctc cttatttcag
     3121 tcccagcttc ttggcaattt cgtgcccctt gccgtaattg cctttgcgct gtccgccgat
     3181 caccagatac acatcgcgcg gcttaaagcc gttctctctt gcccactgcg ccagcgtctg
     3241 gccgtttttg gcaaaatttt cttttagttt ttcaacagta tagccataga tagccctttc
     3301 ccattgtgat aaaatagtga actatttatg cactagaaat taattagtgc attaccaatg
     3361 cgtgaattat gagattttaa aatctctttt acaaggatta ttttgtgatt tctaaatctc
     3421 tttttggtaa tcgtttgaaa gaaaaaagaa agtttttagg gcttacccaa gcacaagctg
     3481 ctgaaaaagc aggtattgag cgcgaaacat ggggcaaata cgaacgtggc gtatttatgc
     3541 ctagtggaga tgtattgctc tcttttttga atatgggaat agatgtgagc agcttatttg
     3601 ctgctgaaca gggaattagg ccgtctgaaa attctgaaat tagtaaggaa gagtcagagt
     3661 tattagggta ttaccgccaa gccagcgata acggcaaatt tgtcattctc agtgtggcaa
     3721 aaggcgcaga gaaaaaagca gccgaaaata ctcaagtttc agccacgcat aaaacagcgt
     3781 gatttttaaa tccaaaatgg agacagtctt atgtttgact ttgaacaaca aatcaaatgg
     3841 ggtgagcgag cggaagaaat cgttaaagag gcagccaccc agaacaatat cgaaattccc
     3901 gaacctttgg cttcggcatt agctaaggcg gtaaaagtgc attatctaag ccaagctggt
     3961 gtgttttctt tggtagaagc ctatgcagac acggtaaatc caactgaaaa agaagtagat
     4021 taccaagcaa tcggcaaaga gctatttgaa aaataaaaaa tgccgtctga aattttcaga
     4081 cggcatttag gacactccga cagtcgggct gctccggtgt tctgaaacgg atattaag
//
LOCUS       DAWGBY010000149         4128 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.149, whole genome shotgun sequence.
ACCESSION   DAWGBY010000149 DAWGBY010000000
VERSION     DAWGBY010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4128
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.149"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            43..675
                     /locus_tag="WHG62_001912"
     CDS             43..675
                     /locus_tag="WHG62_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ1725966.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPVVLVG
                     KAFWSGLAEWINAQLLARGLISEGAASLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="WHG62_001913"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="WHG62_001913"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ1725967.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVNWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLELNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGSLEIPVEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2197..4065
                     /locus_tag="WHG62_001914"
     CDS             2197..4065
                     /locus_tag="WHG62_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ1725968.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYWDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLIKDIPNV
                     HWVDAQKYLPKNTVEIYGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRDGALQ"
BASE COUNT          944 a         1120 c         1063 g         1001 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccggtc gttttggttg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcagcc
      601 tctttgttcg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaggcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccaccacc aatcacgatg
     1021 tcaaagccat cgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gccgaccact ttgggcaaag aaaccgccaa tgtcgtgtac cgcctgcaac
     1321 gccagtttaa aaacctgcaa gcgcaagagt tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtc gcctatcctg atgtaaattg ggaaacccac tgccgcaact
     1441 tcgtcgaaat cagcctcggt ctgaccttca acccctacac catccaaatc gaaccgcacg
     1501 actatatggc ggaattcttc caaaccctca gccgcatcaa cacgattctg atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggttc ttccaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgaag
     1681 gaaacctcgg tatggcaaac gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gctggcagcg cgacctgacc gacagcaccg tcttacgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcccacctgc gcggtctgaa caagctcgaa ctcaaccctg
     1861 ccgcgcttgc cgccgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat tacgcccgaa gtgctgaaag gctttatcgg atcgctggaa atccccgtcg
     2041 aagccaaagc aaaattgctt gagctgaccc ccgcactgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacggggcg atatttatgc aagctgtccg atacaggcct
     2221 gaaattgacg gattgcgggc cgttgccgtg ctatccgtca ttattttcca cctgaataac
     2281 cgctggctgc ccggagggtt tttgggggtg gacattttct ttgtcatctc gggattcctc
     2341 attaccggca tcattctttc tgaaatacag aacggttctt tttctttccg ggatttttat
     2401 acccgcagga ttaagcggat ttaccctgcc tttattgcgg ccgtgtcgct ggcttcggtg
     2461 attgcctctc aaatcttcct ttacgaagat ttcaaccaaa tgcggaaaac cgtggagctt
     2521 tctgcggttt tcttgtccaa tatttatctg gggtttcagc aggggtattt cgatttgagt
     2581 gccgacgaga accccgtact gcatatctgg tctttggcag tagaggaaca gtattacctc
     2641 ctgtatcctc ttttgctgat attttgctgc aaaaaaacaa aatcgctacg ggtgctgcgt
     2701 aacatcagca tcatcctatt tctgattttg actgccacat cgtttttgcc aagcgggttt
     2761 tataccgata ttctcaacca acccaatact tattaccttt cgacactgag gtttcccgag
     2821 ctgttggcag gttcgctgct ggcggtttac gggcaaacgc aaaacggcag acggcaaaca
     2881 gcaaatggaa aacggcagtt gctttcatca ctctgcttcg gcgcattgct tgcctgcctg
     2941 ttcgtgattg acaaacacaa tccgtttatc ccgggaatga ccctgctcct tccctgcctg
     3001 ctgacggcac tgcttatccg gagtatgcaa tacgggacac ttccgacccg catcctgtcg
     3061 gcaagcccca tcgtatttgt cggcaaaatc tcttattccc tatacctgta ccattggatt
     3121 tttattgcct tcgcccatta cattacaggc gacaaacagc tcggactgcc tgccgtatcg
     3181 gcggttgccg cgttgacggc cggattttcc ctgttgagtt attatttgat tgaacagccg
     3241 cttagaaaac ggaagatgac cttcaaaaag gcatttttct gcctctatct cgccccgtcc
     3301 ctgatacttg tcggttacaa cctgtacgca agggggatat tgaaacagga acacctccgc
     3361 ccgttgcccg gcgcgcccct tgctgcggaa aatcattttc cggaaaccgt cctgaccctc
     3421 ggcgactcgc acgccggaca cctgcggggg tttctggatt atgtcggcag ccgggaaggg
     3481 tggaaagcca aaatcctgtc cctcgattcg gagtgtttgg tttgggtaga tgagaagctg
     3541 gcagacaacc cgttatgtcg aaaatactgg gatgaagttg aaaaagccga agccgttttc
     3601 attgcccaat tctatgattt gaggatgggc ggccagcccg tgccgagatt tgaagcgcaa
     3661 tccttcctaa tacccgggtt ccaagcccga ttcagggaaa ccgtcaaaag gatagccgcc
     3721 gtcaaacccg tctatgtttt tgcaaacaac acatcaatca gccgttcgcc cctgagggag
     3781 gaaaaattga aaagatttgc cgcaaaccaa tatctccgcc ccattcaggc tatgggcgac
     3841 atcggcaaga gcaatcaggc ggtctttgat ttgattaaag atattcccaa tgtgcattgg
     3901 gtggacgcac aaaaatacct gcccaaaaac acggtcgaaa tatacggccg ctatctttac
     3961 ggcgaccaag accacctgac ctatttcggt tcttattata tggggcggga atttcacaaa
     4021 cacgaacgcc tgcttaaatc ttctcgcgac ggcgcattgc agtagcctgc cttcttgtcg
     4081 gatattgcct ttggcagcct atgccgctgt ttgcccttcg gggcggcg
//
LOCUS       DAWGBY010000150         4114 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.150, whole genome shotgun sequence.
ACCESSION   DAWGBY010000150 DAWGBY010000000
VERSION     DAWGBY010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4114
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.150"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..143
                     /locus_tag="WHG62_001915"
     CDS             <1..143
                     /locus_tag="WHG62_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HEZ1725969.1"
                     /translation="VGIGGGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRHI
                     QT"
     gene            273..1709
                     /locus_tag="WHG62_001916"
     CDS             273..1709
                     /locus_tag="WHG62_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ1725970.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGQGGAIDILMPLGLSYYTFQSIAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTHQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQFNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRDALCRLKYLAPLSWFVTFHFVCLSFVVFNTANPD
                     DAGAVFSALFANASGWNAPQQADMLLLASFASVMLLYPYLQRAFDGVVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1720..2703
                     /locus_tag="WHG62_001917"
     CDS             1720..2703
                     /locus_tag="WHG62_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ1725971.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGVALQENAYALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGET
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2700..3893
                     /locus_tag="WHG62_001918"
     CDS             2700..3893
                     /locus_tag="WHG62_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ1725972.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKIRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQIQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(3953..>4114)
                     /locus_tag="WHG62_001919"
     CDS             complement(3953..>4114)
                     /locus_tag="WHG62_001919"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725973.1"
                     /translation="GRRQFIIFAFRRHIKRRLCAVCRRFAPVLPMLEANAGCVRQTVR
                     GVAMPSEAI"
BASE COUNT          879 a         1344 c         1053 g          838 t
ORIGIN      
        1 acgtcggtat cggcggcggc gcgctgctgg ggcattgggt tacgcaatat gtcggcattt
       61 cccgtatcgg catcgccggt atgcttgcgg cggcggccgg gctgtggctg tgcctgaact
      121 tgaaccgcca tatccaaacc tgaccgcgcg atgccgtctg aagcccctcc cgcccttcag
      181 acggcatttt gattgaagaa atatccgccc ctgcttaaaa taacgggctt tgccgtgttt
      241 taacgcctat tttcttattc caaggatggt ttatgccgct gctgtctgtc gagttcgcac
      301 tgttctttct cgccttcctg ccgatttact ggggcttggc gaaatacccg tccgtccaaa
      361 acctgctgct tttggctgcc ggtatgggct ggctctacca tatcggcccc gtatttgcgg
      421 caatcgtcgt cctttattcc tcctgcgtgt accttttggg cgaactgctc cgttccgatc
      481 gcgaaaatac gcgccgcttt tggctggggt gcggcattgc cgtctcgctg accgtcttgg
      541 gctttttcaa atatttcgat tttttccgcc cgctgattgc acaatatgcc ggacaaggcg
      601 gcgcaatcga catcctgatg ccgctggggc tttcgtatta caccttccag tcaatcgcct
      661 atttggttta ctgcttccgt gcgccgcacg ccgcgcgttt cgagtggcac gaactgctgc
      721 tgcacctgag ttttttcccc accgttacct ccggcccgat tatccgcgcc gccgcattca
      781 aaagcgcgga cggcgagcag gcgggcgcat tggcgcaaat ccgtacccac caaccacgct
      841 cacccgtccg ccccgcactc gccgtttccc tgattctgct gggtattgcc aaaaaatggt
      901 ggctggcggg gatgctcgca gaaaactggg tatcgcccgt atttgaaaat cccgcccaat
      961 tcgacggctg gggcgtattg gcgggcgtgt acggctatac cttccaactc tttttagact
     1021 tttccggata ttccgacttg gttatcggaa tggcaatgct gctgggcttc cggctgccca
     1081 aaaacttctc cgcaccgctt cgtgccgcga atatccgcgc attttgggac aaatggcaca
     1141 tcagcctttc cacctggata cgcgactaca tctacatccc cttgggcggc agcaaaaaag
     1201 gctttttgcg gacacagttc aacctgatgg cggcaatggt actctccggc atatggcacg
     1261 gctacggctg gaacttcctc atttggggcg cgctgcacgg cacggcgctg gtgctgctca
     1321 acacgggcga ccgttatttc ggacgcgacg cgctatgccg tctgaaatac cttgcgccgc
     1381 tctcgtggtt tgttaccttc cattttgtct gccttagctt tgtcgtcttc aataccgcaa
     1441 accccgacga tgccggcgcg gttttcagcg cgctctttgc caatgccagc ggctggaatg
     1501 cgccgcaaca ggcagacatg ctgctgcttg cctcgtttgc atccgtgatg ctgctctacc
     1561 cttacctgca acgcgctttc gacggcgtgg tcaaaggttt ggaaaaaatc ccgatgtggc
     1621 tgtggtttat ccccgtttcc gccgtcctgc tgctgattat cgtcctcgcc ccctcgggga
     1681 tacccggctt tatttatgcc aatttttaag ggtttggaca tgaaaaactt tctttccctt
     1741 ttcgcctcca tattgatgtc tgccctgatt gccgtgtggt tcagccaaaa ccccatcaac
     1801 gcctactggc agcagaccta ccaccgcaac agcccgctcg aaccgctcgc cgcctacgga
     1861 tggtggcgga gcggtgtggc gttgcaagaa aacgcctacg ccctttcaga cggcatcaaa
     1921 gccttcctgt ccggcgaaac gccgccgacg gctcaagacg gcggttcggc agatatgccg
     1981 tctgaagccg ccgcatcaga agccgtccct caaaccggtg aaacagaatg gaaacaagac
     2041 accgaagccg ccgccgtccg cagcggcgac aaagtctttt ttgccggcga ctcgctgatg
     2101 cagggcgttg cacccttcgt gcaaaaaagc ctgaaacagc aatacggcat cgaatccgtc
     2161 aacctcagca aacaaagcac ggggctgtcc tacccctcat tcttcgactg gccgaaaacg
     2221 attgaagaaa ccctgaaaaa acatcccgaa atcagcgtgc tcgccgtctt cctcggcccg
     2281 aacgacccgt gggatttccc cgtcggcaaa cgatacctca aattcgcttc cgacgaatgg
     2341 gcgcaagaat acctgaaacg cgtcgaccgc atccttgaag ccgcacacac gcaccgcgtc
     2401 caagtcgtct ggctcggcat cccctatatg aaaaaagcca agctcgacgg gcagatgcgc
     2461 tacctcgaca aactgctttc ggaacacctg gaaggcaaaa tcatcctgat tcccaccgcg
     2521 cacaccctga gcggcgggga agaccgctac accgactccg tcaacgtcaa cggcaaaccc
     2581 gtccgctacc gcagcaagga cggcatacac tttaccgccg aaggacaaaa actgctggcg
     2641 gcaaaaataa tggaaaaaat cgtttttgaa ccaagtacgc aaccatcaag tacacagcca
     2701 tgaaccccaa acacctcatc gcattttccg ccctgttcgc cgccacgcag gcagaagccc
     2761 tgcccgtcgc ctccgtcagc ctcgacaccg ttaccgtttc cccgtccgcc ccctacaccg
     2821 atacaaacgg gctcttgacc gactacggca acgccgccgc ctcgccttgg atgaaaaaaa
     2881 tccgatccgt cgcacaaggc agcggcgaga ccttccgcat cctgcaaatc ggcgactcgc
     2941 ataccgccgg cgacttcttt accgacagcc tgcgcaaacg cctgcaaaaa acttggggcg
     3001 acggcggcat aggctgggtt taccccgcca acgtcaaagg gcagcgcatg gcggcagtcc
     3061 ggcacaacgg caactggcaa agcctcacca gcaggaacaa tagcggagac ttcccgctcg
     3121 gcggcatcct cgcccacacc ggcagcggcg gcagcatgac cctgaccgca tcggacggca
     3181 agaccggcaa acagcgcatt tccctgtttg ccaaacccct gctcgccgaa caaaccctga
     3241 ccgtcaacgg caacaccgtc tccgccaacg gcggcggctg gcaggtactg gatacccgcg
     3301 cggcactgcc cttgaccata cagaccgaaa tgccgtggga catcggcttc atcaacatcg
     3361 aaaatcccgc cggcggcatt accgtttccg ccatgggcat caacggcgca caattgaccc
     3421 attggtcgaa atggcgtgcc gaccgtatga acgaccttgc ccaaaccggc gccgatttgg
     3481 ttatcctttc ctacggcacc aacgaagcct tcggcgacaa catcgacatt gccgacaccg
     3541 aacaaaaatg gctggatacc gtccgccaaa tccgcgacag cctgcctgcc gccggcatcc
     3601 tcatcatcgg cgcacccgaa tccctgaaaa acacgctcgg cgtatgcggc acacgccccg
     3661 tccgcctgac cgaagtccaa cagatacagc ggcgcgtcgc ccggcaggga caaaccatgt
     3721 tctggtcttg gcaaaacgcc atgggcggca tatgcagcat gaaaaactgg ctcaaccaag
     3781 gatgggccgc caaagacggc gtacacttct ccgccaaagg ctaccggcgc gcggcggaaa
     3841 tgctcgccga cagcctcgaa gaactcgtcc gcgccgctgc aatcaggcaa taatcggaca
     3901 ggaggcggac ggtatttccg caacaggggg atgccgtctg aaacgcatac cttcatattg
     3961 cttcagacgg catagccacc ccgcgcacgg tttgccggac gcaaccggca ttcgcctcaa
     4021 gcatcggaag gacgggggcg aacctccggc atacggcgca aaggcggcgt ttgatatgcc
     4081 gtctgaaggc aaagatgata aactgccgcc ttcc
//
LOCUS       DAWGBY010000151         4104 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.151, whole genome shotgun sequence.
ACCESSION   DAWGBY010000151 DAWGBY010000000
VERSION     DAWGBY010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4104
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.151"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            777..3944
                     /locus_tag="WHG62_001920"
     CDS             777..3944
                     /locus_tag="WHG62_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ1725974.1"
                     /translation="MNKTWKRQVFRHTALYTAILMFSHTGGGGGAQAQTQTHKYAIVM
                     NNQKLPEVKWGQDYNKLAQKSNERQFTHTSNFHIAKKNVTLSFNNTDKVVAQKNDTVV
                     FGAATYLPPYGKVSGFDADKLNKRGDALGWIKTIKPGLVGYSYEGITCQNNYSHASRG
                     CPELSYKTQFTFGNSGLAKKANGGGLDIYVDKSRDNSPIYKLKDHPWLGVSFNLSSES
                     LVKSIKYNKIISSFSEDVTQNNGADSQHKDKNLVYTTGDYQYKNKYPSRYVGQDEHSA
                     VAFYLNAKLHLLDKKQIKNIAQGKTVNLGTLKPRIELTEAWKNKPGSYFNGNWTFEDK
                     GVVSVELILPQVKADRCINKPNPNNNTKVPSPALTAPALWFGPVQNGKAEMYSASVST
                     YPDSSSSRIFLQNLKRKTDTSRPGRYSLATLNKSDIESREPTFTGRQTIIRLDGGVQQ
                     IKLQGNKVTSFNVNNGNNTFGIVKDLGVDPDASEWKKVLLPWTVRASNDDGQFNTFNK
                     EENNGKPKYSQKYRSRDSSKHERNLGDIVNSPIVAVGGYLATSANDGMVHIFKKGNGD
                     ARNYSLKLSYIPGTMPRKDIENKDSNLAKELRAFAEKGYVGDRYGVDGGFVLRQVEWK
                     GQNRVFMFGAMGFGGRGAYALDLSKIDSNNPTAVSLFDVKDNGNNGNNRVELGYTVGT
                     PQIGKTHNGKYAAFLASGYATKTIDSTDNKTALYVYDLENNNGTPIAKIEVPNGKGGL
                     SSPTLVDKDLDGTIDIAYAGDRGGNMYRFDLSNNDPTKWSARAIFSGNKPITSAPAIS
                     QLKDKRVVIFGTGSDLSEEDVDSKEIQHVYGIFDNDTDTGTAQDGQGKGLLEQVLSEE
                     NKTLFLTDYKRSNGSGSKGWMVKLQPGQRVTVKPTVVLRTAFVTIRKYTDNGCGAETA
                     ILGINTADGGKLTKKSARPIVPAANSKVAQYSGDKKTSSGKSIPIGCMQKDNGIVCPN
                     GYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGIDPDGKRSGKNNRCFSQKGVRTLLM
                     NDLDSLDITGPMCGMKRISWREIFY"
BASE COUNT         1166 a         1011 c         1060 g          867 t
ORIGIN      
        1 agtccgagat tctagattcc cactttcgtg ggaatgacgg aatgtaggtt cgtgggaatg
       61 acgcggtgca ggtttccgtg cggatggatt cgtcattccc gcgcaggcgg gaatctagaa
      121 cgtaaaatct aaagaaaccg tgttgtaacg gcagaccgat gccgtcattc ccgcgcaggc
      181 gggaatccag accttagaac aacagtaata ttcaaaggtt agctgaagct ttagagattc
      241 tggattccca ctttcgtggg aatgacggaa tgtaggttcg tgggaatgac gggatttgag
      301 attgcggcat ttatcggaaa aaacagaaac cgttccgccg tcattcccgc gcaggcggga
      361 atccggcttg ttcggtttcg gtttttttga ggtttcgggc aacttctaaa ccgtcattcc
      421 cgcgcaggcg ggaatctaga ccttagaaca acagtaatat tcaaagatta tctgaaagtc
      481 cgagattcta gattcccact ttcgtgggaa tgacgggatg taggttcgcg ggaatgacgc
      541 ggtgcaggtt tccgtgcgga tggattcgtc attcccgcgc aggcgggaat ccagaccgtt
      601 gggcatctgc agcggtttgc taaaaaacgc tttaccgtga tcagtgtgca aagttaaaat
      661 ggggaggtaa gcttttcaat cagcaattcg gcgggcgcgg aatcgggcgg tttaccgaac
      721 ctcggcgttc gcggcgcgcc gccccgtccc gtgaaggcaa actcaaggaa taaaagatga
      781 ataaaacttg gaaacggcag gttttccgcc ataccgcgct ttataccgcc atattgatgt
      841 tttcccatac cggcgggggg gggggcgcgc aggcgcaaac gcaaacgcat aaatacgcta
      901 ttgtaatgaa caatcaaaag ctgcctgagg taaagtgggg gcaggactat aacaaattgg
      961 cgcaaaaaag caatgaacgc caatttaccc atacgagtaa ttttcacata gccaaaaaaa
     1021 acgtaactct ctcattcaat aataccgata aagttgttgc tcaaaaaaac gatactgtcg
     1081 ttttcggcgc ggcgacctac ctgccgccct acggcaaggt ttccggtttt gatgccgata
     1141 agctgaacaa gcgcggcgat gcccttggtt ggattaagac gatcaaaccg gggttggtag
     1201 gctacagcta cgaaggtatc acatgccaaa acaactacag ccacgccagc cgcggctgtc
     1261 ctgaacttag ctataaaacc caatttacct tcggtaattc cggtttggca aaaaaggcaa
     1321 acggcggcgg gctggatata tacgtagaca aaagccgcga caattcgccc atttacaaat
     1381 tgaaggatca tccatggttg ggcgtgtctt tcaatttgag cagcgagagc ctcgtcaaat
     1441 caataaaata caataaaatt atatcttctt ttagcgagga tgtgacgcag aacaatggtg
     1501 cggacagcca acacaaagac aaaaacctcg tttatacgac aggcgattac cagtataaga
     1561 ataagtatcc ttcccgttat gtcgggcagg acgaacactc cgccgtcgcc ttttatctga
     1621 acgccaaact gcacctgctg gataaaaaac aaatcaaaaa tatcgcgcaa ggcaaaacag
     1681 ttaatttggg taccttgaaa ccgcgcatcg agctgacgga agcatggaaa aacaagccgg
     1741 ggagctattt taatggtaat tggacgtttg aagataaagg agtagtcagc gtcgaactca
     1801 tcttgccgca agtcaaagca gaccgctgca tcaacaaacc gaaccccaat aataatacca
     1861 aagtcccctc ccccgcactg actgcccccg cgctgtggtt cggacctgtg caaaatggta
     1921 aggcggagat gtattccgct tcggtttcta cctaccccga cagttcgagc agccgcatct
     1981 tccttcaaaa tctgaaaaga aaaaccgaca ccagcagacc cggccgctat tccctcgcaa
     2041 ccttgaataa gtcggatatt gaaagtcgag agccgacttt cacagggcgg caaacaatca
     2101 tccgattgga tggcggcgta cagcagatta aacttcaagg caataaggtc actagtttta
     2161 atgtaaacaa cggcaacaac actttcggca ttgttaagga cttgggcgtc gatcctgatg
     2221 ccagcgagtg gaaaaaagtg ctgctgcctt ggacggttcg tgcttccaat gatgacggtc
     2281 aatttaacac attcaacaaa gaagaaaaca acggcaagcc aaaatacagt caaaaatacc
     2341 gcagccgcga cagcagcaag cacgagcgca atttgggcga catcgtcaac agccccatcg
     2401 tggcggtcgg cgggtatttg gctacttccg ccaacgacgg gatggtgcat atcttcaaaa
     2461 aaggcaacgg ggacgcgcgc aactatagtc tgaagctcag ctacatccct ggaacgatgc
     2521 cgcgcaagga tattgaaaac aaagattcca acctcgccaa agagctgcgc gcctttgccg
     2581 aaaaaggcta tgtgggcgac cgctacggcg tggacggcgg ctttgtcttg cgccaagtcg
     2641 aatggaaagg gcaaaaccgc gtgtttatgt tcggcgcgat gggctttggc ggcagaggtg
     2701 catacgcctt ggatttaagc aaaatcgaca gcaataaccc gaccgccgtt tccctgtttg
     2761 atgtaaaaga taacggcaat aatggcaata atcgcgtgga attaggctac accgtcggca
     2821 cgccgcaaat cggcaaaacc cacaacggca aatacgccgc cttcctcgcc tccggttatg
     2881 cgactaaaac cattgacagc acagacaata aaaccgcgct gtatgtgtat gatttggaaa
     2941 acaacaacgg tacgccgatt gcaaaaatcg aagtacccaa cggcaagggc gggctttcgt
     3001 cccccacgct ggtggataaa gatttggacg gcacgatcga tatcgcctat gccggcgatc
     3061 gcggcgggaa tatgtaccgc tttgatttga gcaacaacga tccgaccaaa tggtctgcac
     3121 gcgccatttt cagcggcaac aaaccgatta cttccgcgcc cgccatttcc caactgaaag
     3181 acaaacgcgt ggttatcttc ggcacgggca gcgatttgag tgaagaggat gtggacagca
     3241 aagaaatcca acacgtttac ggtatttttg acaatgacac agacacgggt acggcgcaag
     3301 acgggcaggg caaagggctg ctcgagcaag tgcttagtga ggaaaataaa accttattcc
     3361 tgaccgatta caagcgatcc aacggatcgg gcagtaaggg gtggatggtg aaattgcagc
     3421 ccggacagcg cgttaccgtc aaaccgaccg tggtattgcg taccgccttt gtaaccatcc
     3481 gcaaatatac tgacaacggc tgcggcgcgg aaaccgccat tttgggcatc aataccgccg
     3541 acggcggcaa gctgacgaag aaaagcgcgc gcccgattgt gccggcagcc aattcgaagg
     3601 tcgcgcaata ttccggcgat aagaaaactt ccagcggcaa atccatccct ataggttgta
     3661 tgcaaaaaga caatggaatc gtctgcccga acggatatgt ttacgacaaa ccggttaatg
     3721 tgcgttatct ggatgaaaag aaaacagacg gattttcaac aacggcagac ggcgatgcgg
     3781 gcggcagcgg tatagacccc gacggcaagc gttccggcaa aaacaaccgc tgcttctccc
     3841 aaaaaggggt gcgcaccctg ctgatgaacg atttggacag cttggacatt accggcccga
     3901 tgtgcggtat gaaacgaatc agctggcgtg aaatcttcta ctgatttgca cgcgaaaatg
     3961 ccgtccgaaa ggttttcgga cggcattttt tgcgtttttc gggaggggcg ggttcgtaaa
     4021 aggcgggcta tagggtaggc ttcatctcgc caatctcact gaatccatca atttccacaa
     4081 ttcaattaaa taccgtcaaa ccga
//
LOCUS       DAWGBY010000152         4070 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.152, whole genome shotgun sequence.
ACCESSION   DAWGBY010000152 DAWGBY010000000
VERSION     DAWGBY010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4070
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.152"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(118..774)
                     /locus_tag="WHG62_001921"
     CDS             complement(118..774)
                     /locus_tag="WHG62_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ1725975.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LLILFLLIFRLCWGIWGSDTARFSHFVRGWSGIRDYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRLFKKKNLVFPMITGFKYIEGKTSIHFAGKAALAAALSVVALAAAAILLLS
                     "
     gene            839..1729
                     /locus_tag="WHG62_001922"
     CDS             839..1729
                     /locus_tag="WHG62_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ1725976.1"
                     /translation="MFPVFHLSGESRRRMLQTALRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQETLPFAVIAGFPEIMLDTADGLSKRQD
                     INAWVVGCGLGTGRAAVGTLAGILTEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
     gene            1999..3810
                     /gene="typA"
                     /locus_tag="WHG62_001923"
     CDS             1999..3810
                     /gene="typA"
                     /locus_tag="WHG62_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ1725977.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQVVAVMNHEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKENPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNVRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          978 a         1063 c         1176 g          853 t
ORIGIN      
        1 aaacggtttg ggacggaaaa acggcctgaa gccgtttcgg gcattcagac cgtttgcgcg
       61 gagaggggat gccgtccgaa gggcgaaaag ggcttcagac ggcattgatg tcgggtttca
      121 ggacaggagc aggatggcgg ctgcggcaag cgcgacaacc gataatgcgg cggcaagcgc
      181 ggctttgccg gcaaagtgta tggaagtttt gccttcgata tatttgaagc cggttatcat
      241 cgggaagacg aggtttttct ttttgaatag gcggtatgca gcgacggcgg cgatatggat
      301 ggcggaaaaa acggcgagca gcttgaaaaa gttgaggtgg attttccgca tcaggctgcc
      361 cgtatgctcg gaaaccaaat ggttgaggta gccgttggtg ctgaaggtgt tttcatcggc
      421 ggcaaaaagc cccgtgccga cttgaaatga gacggcggcc aaaagcgcga cgaccatcag
      481 tgcgcccaag gggttgtgtc cgggctggat atgttcggga ataccgtttt tcagataatc
      541 cctgataccc gaccatccgc ggacgaaatg ggaaaaacgg gcggtatcac tgccccaaat
      601 gccccagcag aggcggaata tgagcaggaa aaggataagc agcccgacgc gcgtgtgcca
      661 ttgcagcata tcgccgccgg ttttcgcgct ataccacata aagggtaggg atgcggcaag
      721 cagccaatgg aaaaggcggg tggggaagtc ccagactttg gttttgtttt tcataatcgg
      781 tttccggcgg tagaatcggt ttgttttcga gccttaattt taaccgattg gaggggcaat
      841 gtttcccgtt tttcatcttt caggcgagag ccgccgccgg atgcttcaga cggcattgcg
      901 ttttccctat gttttcaaag cccgtgcgga agattcgcac aaagggactt tcggcacgct
      961 cgccgtagtc ggcggatcgg cagggatgag cggtgcgccc gtattggcgg catcggcggc
     1021 gatgtatctc ggctgcggca aggtgtgggc gggtttcaat caggaaacgc ttccgtttgc
     1081 cgtcattgcc ggttttcccg agattatgct ggatacggca gacggtttga gcaagcgtca
     1141 agatataaac gcctgggttg tcggttgtgg attgggtaca ggtagggcgg cggtcggaac
     1201 gcttgccgga attttgacgg aacacacgga caagcccgtc cttttggatg cggacgcgct
     1261 gaacatatta tcaaccgatg ccgaaacccg aaatctggca cgcgggtgta aaaacctgat
     1321 tttaacgcca caccccgccg aagccgcgcg cctgcttgga acgacggttg cacaggttca
     1381 ggcggatcgg acggcggcag tgaggaagat aggggcaatt ttcggcgcaa ccgtggtttt
     1441 aaaggggcac aaaacattgg ttgccgcgtc cgatacggaa atctatgtca acgaaagtgg
     1501 caacgcggga ttggcaacgg cgggcagtgg cgacgtattg ggcggcatca tcggcagtct
     1561 gctcgcacag ggcgtgccgg tttttgaagc cgcctgcgcg ggcgcgtggc tgcacggcgc
     1621 ggcggcggat gtcataaaag aatcggcagg cattgcggca gggctgttgg ctggcgaaat
     1681 cgccccggcg gcaaggtggc tgcgtaaccg gataactgaa agtatgtaag aagatatagt
     1741 ggattaacaa aaaccagtac ggcgttgcct cgccttagct caaagagaac gattctctaa
     1801 ggtgctgaag cactaagtga atcggttccg tactatccgt actgtctgcg gcttcgccgc
     1861 cttgtcctga tttttgttaa tccactatac cgtctgaaag gcaagggctt cagacggcat
     1921 cttcatttcc caaatactgt ccggtaaagc gtggtataat gcgcagttat ctcttacagt
     1981 ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg ccatcatcgc ccacgtcgac
     2041 cacggcaaaa ccacattggt cgaccaactg ctgcgccaat ccggcacatt ccgcgccaac
     2101 cagcaggttg acgagcgcgt gatggacagc aacgacctcg aaaaagaacg cggcatcacc
     2161 atcctcgcca aaaacaccgc catcgattac gaaggctacc acatcaatat cgtcgatacg
     2221 ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt tggggatggt ggactgcgtc
     2281 gtcttgttgg tggatgcgca agaaggtccg atgccgcaaa cccgtttcgt gaccaaaaaa
     2341 gccttggctt tggggctgaa accgattgtc gtcatcaaca aaatcgataa accgtccgcc
     2401 cgtccgagct gggtcatcga ccaaactttc gaactcttcg acaacttggg cgcaactgac
     2461 gaacagttgg acttcccgat tgtttacgct tcaggtttga gcggctttgc caagctggaa
     2521 gaaaccgacg agagcaacga catgcgtccg ctgttcgaca ccatcctaaa atacacgccc
     2581 gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa tctcccaact cgactacgat
     2641 aactacaccg gccgcctcgg catcggtcgt atcttgaacg gacgtatcaa gcccggtcaa
     2701 gttgttgccg tgatgaacca cgagcagcaa atcgcccaag gccgcatcaa ccagcttttg
     2761 ggtttcaaag gcttggaacg cgtgccgctt gaagaagccg aagcaggcga catcgtgatt
     2821 atttccggta tcgaagacat cggtatcggc gtaaccatca ccgacaagga aaatcccaaa
     2881 ggtctgccga tgttgagcgt agacgaaccg acgctgacca tggactttat ggtgaacacc
     2941 agcccactcg cgggtactga aggcaaattc gtaaccagcc gccaaatccg cgaccgcctg
     3001 caaaaagaat tgctgaccaa cgttgccctg cgcgtggaag ataccgccga tgccgacgtg
     3061 ttccgcgtat ccgggcgcgg cgaactgcac ctgaccattt tgttggaaaa tatgcgccgc
     3121 gaaggctacg aactcgccgt cggcaagccg cgcgtcgtgt accgcgacat cgacggtcaa
     3181 aaatgcgaac cttatgaaaa cctgaccgtg gacgtacccg acgacaacca aggcgcggta
     3241 atggaagaac tcggccgccg ccgtggcgaa ctgaccaata tggaaagcga tggcaacgga
     3301 cgcacccgcc tcgaatacca tattccagcg cgcggcttga tcggtttcca aggcgaattt
     3361 atgaccctga cgcgcggggt cgggctgatg agccacgtgt tcgacgatta cgcgcccgtc
     3421 aaacccgata tgcccggccg ccacaacggc gtgctggtgt cccaagagca gggcgaggca
     3481 gtcgcttacg ccttgtggaa tctggaagac cgcggccgta tgttcgtatc gcccaacgac
     3541 aaaatctacg aaggtatgat tatcggtatc cacagtcgcg acaacgattt ggtggtcaac
     3601 ccgctcaaag gcaaaaaact taccaacgtc cgtgccagcg gtaccgacga agccgttcgc
     3661 ctgaccacgc cgattaaact gacgctggaa ggtgcggttg agtttatcga cgatgacgaa
     3721 ctcgttgaaa tcacgccgca atccatccgt ctgcgcaagc gttacttgag cgaattggaa
     3781 cgccgccgcc actttaaaaa gctggattga tgtttactgg attaatgttt aaatgatacg
     3841 cgatgccgtc tgaaaaattt cagacggcat tttttattcg gacgggcttt gcggcttctt
     3901 gaagctgttt cagacggcgt ttttcctacc caatcaagaa actgccgcca tttttccagc
     3961 ggtatatcgc cccgtcgcgt ttcggtatcg ggttcggctt cccggcagca tgtcgaacaa
     4021 tgccgtttga aggaatacgc cttttgagtc cttacaagct taggaagagg
//
LOCUS       DAWGBY010000153         3988 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.153, whole genome shotgun sequence.
ACCESSION   DAWGBY010000153 DAWGBY010000000
VERSION     DAWGBY010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.153"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(94..990)
                     /gene="argB"
                     /locus_tag="WHG62_001924"
     CDS             complement(94..990)
                     /gene="argB"
                     /locus_tag="WHG62_001924"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ1725978.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRMPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1160..2290
                     /locus_tag="WHG62_001925"
     CDS             1160..2290
                     /locus_tag="WHG62_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ1725979.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFDNAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDHQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2361..3212
                     /locus_tag="WHG62_001926"
     CDS             2361..3212
                     /locus_tag="WHG62_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ1725980.1"
                     /translation="MIIHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVIFGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWSGWLQQYSMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3295..3957)
                     /locus_tag="WHG62_001927"
     CDS             complement(3295..3957)
                     /locus_tag="WHG62_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HEZ1725981.1"
                     /translation="MDSRKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEENGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
BASE COUNT          874 a         1169 c          970 g          975 t
ORIGIN      
        1 tcaggaatga cggtttggaa attgcccgaa accccaaaaa cagaaaccgg acaaacgggt
       61 tttccgccaa agccggcatt ttccgacttt gcttcaggca tcttccccac cgcccaaaat
      121 catcgaaccg ataccggcat cggtaaagat ttccagcaaa agcgcgttgg gcatcctgcc
      181 gtcgatgatg tgcgtggctt tcacgccgtt gacggcggct tcgaccgcgg aagcgatttt
      241 cggcagcata ccgccataca gcgtgccgtc ggcaatcagt tcatcaatcc gtttcggcgt
      301 gagtttggtc agcagattgc ccgttttgtc catcacaccg gcgatattcg tcatcatcaa
      361 gagtttttca gcgttcaatt cttccgccaa tttgcctgct accaaatcgg cgttgatgtt
      421 gaacgcttcg cctttttcac ctacgccgac gggggcgacg acgggaatgc agccacgttc
      481 tatcagccct ttaaccaaac cggtatcgat gctttccacc gtaccgacct gtccgatgtc
      541 cacgccattc tgttcgggcg tatcgatcaa aagtttcttc gccttaatga aatggtcgtc
      601 gcgtccgctt acgccgaccg cgtgtccgcc atatgtgtta atcatcgaca cgatttcttt
      661 attgacatgc ccgcccaaca ccatttcgac aatatccatc gcctctttgt cggtaacgcg
      721 cattccttgg acaaactcac cctttttgcc gactttttca agcatcgcat tgatctgcgg
      781 cccgccgccg tgaacgatga cgggatgaat gccgaccagc ttcagcagca cgacatcgcg
      841 ggcaaaccct tctttcaagg caggttcggt catcgcgttg ccgccgtatt tgatgacggc
      901 gaccgaaccg gaaaaccggc ggatgtaagg cagcgcttcg gcaaggatac gcgccttgtc
      961 ggcggcggaa ataatgtttt cagactccat aacggctccc tattgttgac aatttcggct
     1021 tatgttaacg ccaaacgccg tctgaaacaa tcttcagacg gcatccggca gactttcggg
     1081 caggttgaag ccttgcgata cgggcggtaa aatcgcggtt tatccggttc gagaaaccgg
     1141 cgacagcaag gactttccca tgattaaaat cagcacccgc ttcgatgccg gctcggtcgt
     1201 cgtcaaagac ctgaccgatc cttccaacat ccgcctcgcc ctgcgtcccg acaacgcctc
     1261 cgattttgca caatggttct acttccggct gcaaggcgcg gcatatcaaa actgcatcat
     1321 gcattttgac aatgcggcag aagccgccta cccgaaaggc tgggaaggct atcaggcgtg
     1381 tgcctcatac gaccgccgca actggttccg cgtaccgact tcctacgaaa acggcgtact
     1441 gaccgtcaat catacgccgc tgtccaacag cgtgtattac gcctatttcg aaccttactc
     1501 cgaagaacag catttaaacc tcctcggcga cgcgcaaggc agcggcctgt gccgcatcga
     1561 cgacttgggc agcaccgtgc aagggcgcga catcaatctg ctgaccatag gcaatcaggt
     1621 cgaaagcgat ttgaaaatct ggattaccgc ccgccagcat ccaggcgaaa ccatggcgga
     1681 atggtttgtc gaaggactgc tcggcaggct gctcgaccat caggatgcaa ccgcgcgcac
     1741 cctgctcgat cgcgccacgt tctatatcgt ccccaacatg aaccccgacg gttcggcact
     1801 gggcaacctt cgcaccaacg ccgccggtgc gaacctcaac cgcgaatggg aaaatccgac
     1861 tttggaaaaa agccccgaag tgttcttcgt gcgcgaaaaa atgctggaaa ccggcgtgga
     1921 tttgttcttg gacatccacg gcgacgaagg gctgcccttt atctttgttg caggaactga
     1981 aggcgtgcca aactacaatc cgcgcatttc cgcgttggaa acacagttca aaaccgccct
     2041 tttgaacgcc agccccgatt tccaagacga atacggttac gaaaaagatg cgcccggtca
     2101 ggcaaacatg accttggcaa caaactgggt cggcaaccgt ttcaactgcc ttgcctatac
     2161 gttggaaatg ccctttaaag acaatgccaa cctgcccgac gacgatttcg gatggaacgg
     2221 tcaacggtcg ttgcgcttgg gcgaagccgc gttgtccgcc atcctcaaca tcatcggcga
     2281 tttgcgctga aacccttatt gcagaaatgc cgtctgaagc atcatgcctt tcagacggca
     2341 tttgaaaacg aaagcctgtt atgattatcc atccccaatt cgatcccgtc ctcatcagta
     2401 tcggcccgct tgccgtccgc tggtatgccc taagctacat cctcggattt attcttttta
     2461 cctttctcgg cagaaggcgc atcgcgcaag gcttgtccgt ttttaccaaa gaatcgcttg
     2521 acgacttcct cacttggggc attttgggcg taatttttgg tgggcgtttg ggttacgtcc
     2581 tgttttacaa gttttccgac tacctcgccc atccgcttga tattttcaag gtatgggaag
     2641 gcggaatgtc gttccacggc ggctttttgg gtgtagttat tgccatatgg ttgttcggcc
     2701 gcaaacacgg catcggcttc ctcaaactga tggacacggt cgcaccgctc gttccgctgg
     2761 gtctcgcttc gggacgtatc ggcaacttca tcaacggcga actttgggga cgcgttaccg
     2821 acatcaacgc attttgggca atgggcttcc cgcaggcgcg ttacgaagat gccgaagccg
     2881 ccgcgcacaa tcccctttgg tcaggttggt tgcaacaata tagtatgctg ccccgccatc
     2941 cctcgcagct ttatcagttt gcacttgaag gcatctgcct gttcgccgtc gtttggctgt
     3001 tctctaaaaa acagcggccg accggacaag tcgcctcgct cttcctcggc ggctacggca
     3061 tattccgctt cattgccgaa ttcgcacgcc aacccgacga ctatctcggg ctgctgacct
     3121 tggggctgtc gatggggcaa tggttgagcg tcccgatgat tgttttgggt atcgtcggct
     3181 ttgtccggtt cggcatgaaa aaacagcact gaccgcctgt gaaaaatacc gtctgaaaca
     3241 tggaaatccg gtttcagacg gcatttttac gtttggttca tggaaacaaa cgcttcaatt
     3301 cttaccgcaa cacgccttgt attttctgcc gctgccgcac ggacagggat cgttcctgcc
     3361 tgttttttcg ccttccctgc ggacggtttg cggtttgttg atgactgcct gccagtagcg
     3421 gtagatatcc gccaatgcat aaggcaactc ggattccagt tccgccagct cgccttctgt
     3481 gaattgcaga cggatagtgc cgttttcctc ttcgtcgtaa atacccccca atgccatgat
     3541 gggataaaac aactcttcaa acgcttcatc atcgacggct tcaaaccaat cggtcggcac
     3601 aatatccaaa ccgtaaagat aagcattgca ccatgtgtaa aaatcgctgc cgccgtcttc
     3661 gttttcatac agccacaaat cgggcagttt tttatccgac atcgcggcgg ttgtttccat
     3721 cgccattgcc aaaaccagcc gttcgatttc ggaacgttcg gcggcggtaa attgcgattc
     3781 gtcgcccaac acttcgggca gccagtcgag cggtgtcaat ttgtccggcc cgctcaacag
     3841 cgccgtcata aaaccttgaa cctcgtcgca acgcatcgtg ttgccttgtt cgcttttggc
     3901 atccaacaat tcgctcaacc gccgtttgga tgcttcggta aattttcggg aatccatcat
     3961 tttccttttc aaatgggttt tgcgccct
//
LOCUS       DAWGBY010000154         3986 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.154, whole genome shotgun sequence.
ACCESSION   DAWGBY010000154 DAWGBY010000000
VERSION     DAWGBY010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.154"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(88..906)
                     /locus_tag="WHG62_001928"
     CDS             complement(88..906)
                     /locus_tag="WHG62_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ1725982.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDRPDPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIGNPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDIFRNFSL"
     gene            complement(986..2236)
                     /locus_tag="WHG62_001929"
     CDS             complement(986..2236)
                     /locus_tag="WHG62_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ1725983.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPSRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPTHAQVFSLPPVGGFKNRLVVDLYPQGMDADDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYLNTSVLKRG"
     gene            complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WHG62_001930"
     CDS             complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WHG62_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ1725984.1"
                     /translation="MSDFPPVSRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGGGRKCLLTAHTERGRESLPL"
     gene            2884..3696
                     /locus_tag="WHG62_001931"
     CDS             2884..3696
                     /locus_tag="WHG62_001931"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ1725985.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          889 a          958 c         1176 g          963 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggcgtg tccattttgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcggaaaa tatccatatc
      121 aggctgtggg ccgtacttat ttacggtatt ttcgtatgcc gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggag aatacgcaag gaaaaaaacc ggagcgcatc agcgacaagg tcatacagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaagg gatttcctat ttttggggct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttggataa aggcgtgtag tctgtcccgc ttatagtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttccg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggatcg gggcggtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactgt acacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gtccgttaaa acagataaag gaagccgatc ggacaattcg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggcgga agtaggttta tgcctgcctt catccgacaa
      961 ctatattgaa acaccgcctt ttcaatcaac cccgcttcaa tacggatgta ttgaggtagc
     1021 gttggacacc cgaggcaatg gattgggcgc actgccgacg gaaggattcg ctgcccagca
     1081 gcttctcttc ggcaggattg gacaggaagg cggtttcgac caggatagac ggcatatcgg
     1141 gcgcgcgcaa aacggcgaaa ttggcttcgt ccaccctgcc tttgtgcaag tggttgagcc
     1201 tgcccaattc ttcaagcacc agtttgccga gtttgcggct gtcgcgcagc gtggcggttt
     1261 gggtcatgtc gagcagggcg gtatcgacat tgcggttgcc gctggtcggt acgccgccga
     1321 ccgcgtcggc attattttgg gtttgttcca agaatttggc ggcagagctg gtcgcgcctt
     1381 tggtgttcag catataaacc cccgttccgc gcgcggaggg gctggtgaaa gcgtcggcgt
     1441 ggatggagac gaatacgtcc gcccgccgtg cgcgcccttt ggcgacacgc acgcccaatg
     1501 ggatgaacac gtcttcgttg cgcgtcataa agacgttgta acccaaggct tccaattgtt
     1561 ttttggtttc gcgggcgatg gagaggacga cgtgtttttc ctgcaaaccg cccgggctga
     1621 cggcgccggg gtcttcgccg ccgtgtccgg ggtcgatcat aatgacgggt ctgcgcccgt
     1681 ttttgccgcg ttcggtttgt gcgggagtgt tttgagcgag gtcggcttca ggggagccgc
     1741 gacgggtttt gttcaggctg ccgttgagca gcgccatcat cggatcgtcg gcatccatcc
     1801 cttgcggata gagatcgacg acgaggcggt ttttaaagcc gccgacgggt gggagggaaa
     1861 agacttgtgc gtgggtgggc tgtttcaaat cgatgacgag gcggacggtg gtcggtgtgt
     1921 tctgacccgc gcgtatgctg cggataaagg ggtcgtccgc cataaccttc tgagacagtc
     1981 cgtgcaatac ggtattgatg ttcgcgtttt gtatatcgac gaccagcctg cttgggttgt
     2041 cgagcgcgaa gtgctggtat ttgagcgcgg cggtgctttc cagcgtcagg cgggtgtagg
     2101 tgtgcgatgg ccatatccgt gcggcagtga attgtggtgc gcgtaccgtt ttggcaacgg
     2161 cggatgcgat ggggcttagg gcgaacagtg tgccggcggt gcggcggatg atttgtcttc
     2221 gtgtcagttt ggtcatagcg gcaggctttc gcgtcctcgt tcggtatggg cggtcagcag
     2281 gcattttctg ccgccgccgt cgtgtgtcaa tgttgcggtg atgtcggcgg gcggggtaaa
     2341 ttcgcctccc tgttgcggcc attcgatcag gcagacgctg tttgcggcaa acagttcgtc
     2401 aagccccgcg tcttcccatt cttcggggaa cgagaagcgg tagaggtcga aatggtgcag
     2461 ggtgaagcgt tccagcggat aagattcgac gatggcgtag gtcgggcttt tgactgcgcc
     2521 ctgatgaccc aatccgcgca ggatgccgcg tgtcagcgtg gttttgcccg cacccaaatc
     2581 cccttcgaga taaatgacca gcggtgcgtt taaacgggaa gaccacgccg cacccaaatc
     2641 gagtgtggcg gcttcgtcgg caaggaatcg ggaaacggga ggaaaatcag acataggggc
     2701 tttacaactt ttatgtggcg gatcggaggg gcaggcggtc ggcaaaccgt gcgcccggcg
     2761 gcagcattgc cgtacattat aacagccaaa tccgcatcct gctttcagac ggcaacggct
     2821 gtcaagaaaa agcggcgcgt gtacaatacg cggattgtat gtttaggacg gattggaaaa
     2881 agaatggaaa atatcggcag gcagcgaccc atcggcgttt ttgactcggg aatcggcggt
     2941 ttgaccaatg tgcgagcgct gatggaacgg ctaccgatgg agaacatcat ttatttcggc
     3001 gacacggcgc gcgtgcctta cgggacgaaa tctaaggcga ccatcgaaaa tttctcgatg
     3061 cagattgtcg attttttatt ggaacacgat gtcaaggcga tggttatcgc gtgcaatacg
     3121 attgcggcgg tggcggggca gaaaatccgc caaaagacgg gcaatatgcc tgtgttggac
     3181 gtgatttccg ccggcgcgaa agccgcgctg gcaacgacgc gcaacaataa aatcggcatc
     3241 atcgccacca ataccacagt taacagcaat gcttatgcgc gcgccatcca cagggacaac
     3301 cccgacacgc tcgtccgcac gcaggctgcg ccgctgctcg tccctttggt ggaagagggc
     3361 tggttggaac acgaagttac ccgcctgacc gtatgcgaat acctcaaacc attgcttgca
     3421 gacggcatcg atacgctggt gttgggctgc acgcactttc ccttgctcaa gcccttaatc
     3481 ggcagggagg cgcataatgt cgcgctggtc gattccgcga ttacgacggc tgaagaaacc
     3541 gcacgcgtcc ttgctcagga aggattgctc aataccgaca acaacaatcc cgactaccgt
     3601 ttttacgtca gcgatattcc tttgaaattc agaaccatcg gcgagcgttt tctgggcagg
     3661 acgatggagc agattgaaat ggtgtctttg ggttaaaacg atgacggaaa gctgcccgag
     3721 attacagaaa cctaaaatcc cgtcattccc acgaaagtgg gaatctagac ctgtcggtgc
     3781 ggaaacttat cggataaaac ggtttcttta gattttacgt tctagattcc cactttcgtg
     3841 ggaatgacgg gattagagtt tcaaaattta ttctaaatag ctgaagctca acgcactgga
     3901 ttcccgcctg cgcgggaatg acgaatttca ggtttctgtt tttggttttc tgtttttgtg
     3961 aaaataacgg gatttcagct tgtggg
//
LOCUS       DAWGBY010000155         3965 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.155, whole genome shotgun sequence.
ACCESSION   DAWGBY010000155 DAWGBY010000000
VERSION     DAWGBY010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3965
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.155"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..332)
                     /locus_tag="WHG62_001932"
     CDS             complement(<1..332)
                     /locus_tag="WHG62_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ1725986.1"
                     /translation="MFSLYREDSLISRLNRDGYLTSPSADFLELLSLCRDIHALTDGA
                     FDPTVQALWKLYADYFAARPDAETPPPQNSVKEALKRVGFGKVSFDDREIRFAEKGMG
                     LSLNGIAQG"
     gene            complement(313..594)
                     /locus_tag="WHG62_001933"
     CDS             complement(313..594)
                     /locus_tag="WHG62_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nosX protein required for nitrous oxide
                     reduction"
                     /protein_id="HEZ1725987.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKRN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKIVQPLP"
     gene            complement(603..1397)
                     /locus_tag="WHG62_001934"
     CDS             complement(603..1397)
                     /locus_tag="WHG62_001934"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ1725988.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVLEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV"
     gene            1820..3154
                     /gene="gdhA"
                     /locus_tag="WHG62_001935"
     CDS             1820..3154
                     /gene="gdhA"
                     /locus_tag="WHG62_001935"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ1725989.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3296..3670
                     /locus_tag="WHG62_001936"
     CDS             3296..3670
                     /locus_tag="WHG62_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725990.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3714..>3965
                     /locus_tag="WHG62_001937"
     CDS             3714..>3965
                     /locus_tag="WHG62_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEZ1725991.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQ"
BASE COUNT         1074 a         1033 c          939 g          919 t
ORIGIN      
        1 ccttgcgcga tgccgttcaa ggacaaaccc ataccctttt cggcaaaacg gatttcacgg
       61 tcgtcaaacg agactttgcc gaagccgacc cgtttcaggg cttccttcac gctgttttga
      121 ggaggcggcg tttccgcatc gggacgggcg gcaaaataat cggcatacag tttccacaac
      181 gcctgcactg tcggatcgaa cgcgccgtcc gtcagcgcgt gaatatcgcg gcacaggctc
      241 aacagttcca aaaaatccgc cgacggcgaa gtcagataac cgtccctgtt caggcggctg
      301 atcaggctgt cttcacggta aaggctgaac aattttttcc aaacgcgcca cttccgccaa
      361 aaccttgttg accaaatccg ccgcctgtct gtcgtccaca ccgaacaggc gcagctccgc
      421 accggaaccc agcgcgacac ctttccagaa gaacacattt tcattgcgtt tttcatcttt
      481 attgcgtttt tcatcatcgg cggcaaaagg attcggcagg aaagaaaccg ccgcgcccgc
      541 cgccgcaacg gcggcaactg tcaaaaaacg cctgcgcccg aaatgcctgc ccataccgcc
      601 tcctaaaccg acactgccgc cttgatgtgc ggatgggggt cgtaaccttc caactcgaaa
      661 tcttcaaact tgaaggaaaa caaatctttg acttcaggat tgattttcat cactggcaag
      721 gcgcgcggtt cgcgttccaa ctgcaatgcg gcctgctcga aatggttgcg gtacaaatgc
      781 gcgtcgccaa acgtatggac aaactcgccc gcctccaatc cgcacacttg cgccatcatc
      841 atggtcaaca atgcgtagct ggcaatatta aacggcacac caaggaaaat atctgcacta
      901 cgctggtaaa gctggcagga cagtttgccg tcggcaacgt aaaactgaaa cagcgcgtgg
      961 cagggcggca aggccatttc atcgaccaaa gccggattcc acgccgatac aatcaggcgg
     1021 cgcgagtcgg gattcttctt gatttgttcc agcacattgg cgatttggtc gatatgcctg
     1081 ccgtcgggcg cgggccagtt acgccactgg tagccgtaaa ccgggcctaa gtcgccgttt
     1141 tcgtccgccc actcgtccca aatggaaaca ttgttgtcct ttaggtattt gatattggta
     1201 tcgcctttga gaaaccaaag cagctcgtgg ataatcgagc gcaaatgcag ctttttggtc
     1261 gtcagcagcg gaaaaccttt gcccaagtca aaacgcatct gataaccgaa tacggagcgc
     1321 gtgcccgtac cggtgcggtc tgatttgtcc gtaccgttgt cgaggacgtg gcgcatcaag
     1381 tccaaatagg ctttcatagc agtctttcat caaattaaac ggcgcatatt gtaacatttc
     1441 cggccaacgc ccgagtccgg acaaacgcac acgccgcccc gccggacgat aaaaacgcag
     1501 atacgggcag gcaggattgt tggcaatttc agtccttttc cacagtaaaa cccggtggga
     1561 aaacaaaatt accttgattg gaatcaaaaa atctagttta attacttaga ataaaatttc
     1621 aataatattt ttatttacga aattaattta tgattattga ttgattatcg gcaacaaaca
     1681 tcaaacatcg aaaacatgga aaaaataatg tcaacaattt ttgccaaatc gggcttggca
     1741 tcagaaaaaa ataggtttat attcccacct acaaatttgt tttcccatta gtacactatc
     1801 aaccaaaagg agtatccgaa tgactgacct gaacaccctg tttgccaacc tcaaacaacg
     1861 caatcccaat caggagccgt tccatcaggc ggttgaagaa gtcttcatga gtctcgatcc
     1921 gtttttggca aaaaatccga aatacaccca gcaaagcctg ctggaacgca tcgtcgaacc
     1981 cgaacgcgtc gtcatgttcc gcgtaacctg gcaggacgat aaagggcaag tccaagtcaa
     2041 ccggggctac cgcgtgcaaa tgagttccgc catcggtcct tacaaaggcg gcctgcgctt
     2101 ccatccgacc gtcgatttgg gcgtattgaa attcctcgct tttgaacaag tgttcaaaaa
     2161 cgccttgacc accctgccta tgggcggcgg caaaggcggt tccgacttcg accccaaagg
     2221 caaatccgat gccgaagtaa tgcgcttctg ccaagccttt atgaccgaac tctaccgcca
     2281 catcggcgcg gacaccgatg ttccggccgg cgacatcggc gtaggcgggc gcgaaatcgg
     2341 ctacctgttc ggacaataca aaaaaatccg caacgagttt tcttccgtcc tgaccggcaa
     2401 aggtttggaa tggggcggca gcctcatccg tcccgaagcg accggctacg gctgcgtcta
     2461 tttcgcccaa gcgatgctgc aaacccgcaa cgatagtttt gaaggcaaac gcgtcctgat
     2521 ttccggttcc ggcaacgtgg cgcaatacgc cgccgaaaaa gccatccaac tgggcgcgaa
     2581 agtgctgacc gtttccgact ccaacggctt cgtcctcttc cccgacagcg gtatgaccga
     2641 agcgcaactc gccgccttga tcgaattgaa agaagtccgc cgcgaacgcg ttgccaccta
     2701 cgccaaagag caaggtctgc aatactttga aaaccaaaaa ccgtggggcg tcgccgccga
     2761 aatcgccctg ccctgcgcga cccagaacga attggacgaa gaagccgcca aaaccctgtt
     2821 ggcaaacggc tgctacgtcg ttgccgaagg tgcgaatatg ccgtcgactt tgggcgcggt
     2881 cgagcaattt atcaaagccg gcatcctcta cgccccggga aaagcctcca atgccggcgg
     2941 cgtagcaact tcaggtttgg aaatgagcca aaacgccatc cgcctgtctt ggactcgtga
     3001 agaagtcgac caacgcctgt tcggcatcat gcaaagcatc cacgaatcct gtctgaaata
     3061 cggcaaagtc ggcgacacag taaactacgt caatggtgcg aacattgccg gtttcgtcaa
     3121 agttgccgat gcgatgctgg cgcaaggctt ctaagcaaac gccgccgctc cgcaaacaaa
     3181 atgccgtccg aaccgcaaat gctgttcaga cggcatttca ttatccgccc gttcgaatcg
     3241 ggtgatacta tttgtatcca gaattgttgg atagtttggg agtggagagg aagaaatgat
     3301 tatggaccaa tactatatgg agttaaagaa taagttatct aacagaccaa tcctactgga
     3361 taatactaat gattttcttt ttgttttagt aaatacagtg aaagctatga tagaaaatac
     3421 tgataaaagt cagctttcag agttagataa aattttagac ggtgtcacaa gtcaagaatt
     3481 gaaacttgcc tatgattttt gtcaagggaa attcggtcaa gcaggttttt cttatcgtag
     3541 gcacccgaat tatttttatt tgtccagttt aattgcgact tttccagaat ttgagttgtc
     3601 taaagcagac cgagattacc tcaaaggaat cataaatttt gataactacc ttttatatga
     3661 gttagattag tctttaatca cctcaaaacc ctatttattc aaaaggagaa aaaatgattg
     3721 agctgaaatt agtagatgag agcagttttc aggcagtgct ggatttgaaa atatctgaag
     3781 ctgatgaacg agcacgtttt gtggctccaa atgtacgctc tttagctgac gcatggctct
     3841 accgggaaaa tgaagatgtg tttccgaggg caatctattg ggataagcaa gtggttggct
     3901 ttctcctgct ggaaatagac aaggatgaag cagaatactt tatctggcgg ataatgattg
     3961 gtcag
//
LOCUS       DAWGBY010000156         3882 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.156, whole genome shotgun sequence.
ACCESSION   DAWGBY010000156 DAWGBY010000000
VERSION     DAWGBY010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.156"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..415)
                     /locus_tag="WHG62_001938"
     CDS             complement(<1..415)
                     /locus_tag="WHG62_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEZ1725992.1"
                     /translation="MTHISSPRNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWL
                     EMLLMTGMNFAGGSEFATVNLWAEPLPILLIATVTFMINSRHILMGAALAPHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKAAGLPAFNMP"
     gene            558..1010
                     /gene="dut"
                     /locus_tag="WHG62_001939"
     CDS             558..1010
                     /gene="dut"
                     /locus_tag="WHG62_001939"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ1725993.1"
                     /translation="MNIEVEMKVLDERMADVVPVYATKGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLADPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            1086..2273
                     /gene="dapC"
                     /locus_tag="WHG62_001940"
     CDS             1086..2273
                     /gene="dapC"
                     /locus_tag="WHG62_001940"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ1725994.1"
                     /translation="MNTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS
                     LYR"
     gene            2535..3314
                     /gene="yaaA"
                     /locus_tag="WHG62_001941"
     CDS             2535..3314
                     /gene="yaaA"
                     /locus_tag="WHG62_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ1725995.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWNTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTPFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3397..3487
                     /locus_tag="WHG62_001942"
     tRNA            3397..3487
                     /locus_tag="WHG62_001942"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3431..3433,aa:Ser,seq:tga)
     gene            3565..3654
                     /locus_tag="WHG62_001943"
     tRNA            3565..3654
                     /locus_tag="WHG62_001943"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3599..3601,aa:Ser,seq:cga)
BASE COUNT         1002 a          937 c          950 g          993 t
ORIGIN      
        1 aaggcatatt gaatgcgggc aaaccggctg ccttccgttt ttggatttcg gagaatgcca
       61 tcgcccagct ttcatcacac ataaaaaaca gtgcgggcac ggcttttttc agcggtattt
      121 ctttcaggtg cggggcaagt gccgccccca tcaggatatg ccgagaatta atcataaagg
      181 ttacggtggc gataagcagt atcggcagag gttccgccca caggttgacc gtggcaaact
      241 cggagccgcc ggcgaagttc ataccggtca tcaacaacat ttccagccag ctcatgcctt
      301 tttgtccacc ctgcataccg agtattaatg cccaaggcaa aagcccgatc agcatgggcg
      361 aactttcttt gatgccgcgt ataaattcgt tacggggcga gcttatgtgt gtcatattaa
      421 tattgatatg taagaaggtc gggcattata cacagacgga gtatttcaaa acaaaaccta
      481 tttgctgtgt ttcagcgtaa acacggcttg tgtataatct cccatctttg aaaccggccg
      541 tatgcaggag caagacgatg aatattgaag tagaaatgaa agtattggac gaacggatgg
      601 cggatgttgt ccctgtctat gcaacgaagg gttctgcagg tttagatttg cgcgcctgtt
      661 tggatgagga agtcgttttg cagccgggtg aaacgtttct tgtgccgaca ggtttggcaa
      721 tttatttggc tgatccttca tatgccgccg ttttgctgcc ccgttccgga ttggggcata
      781 aacacggcat tgttttgggc aatttggtcg gcttgattga ctccgattat caaggggaat
      841 tgaaggtttc gttatggaac agaagcagcg agccgtttac tgtcaaaccg tttgagcgta
      901 tcgcgcagat ggttatcgtg ccaatcgtgc aggcgcgttt caaacgtgtc gaggaatttg
      961 tcggaagcag ccgtggagaa ggcggtttcg gcagtacggg tttgcattga atataaaatg
     1021 ccgtctgaag ggcacgtcag gttcagacgg catatcttcc gatataccga taaccggaga
     1081 aaatcatgaa taccttactc aagcagctca aaccctatcc ctttgcccga ctgcacgagg
     1141 cgatgcaggg catttccgcg cctgaaggca tggaagccgt ccccctgcac atcggcgaac
     1201 cgaaacatcc gacaccgaaa gtcattacgg atgcgctgac cgcctcattg cacgagttgg
     1261 aaaaatatcc gctgactgcg ggtctgcctg aactgcgtca ggcgtgtgca aactggttaa
     1321 aacgccgtta cgatggcttg acagtggatg cggataatga aattctgccg gttttaggca
     1381 gtagggaggc gttgttttct tttgttcaaa ccgtgttgaa ccctgtttca gacggcatca
     1441 aacccgcaat tgtcagcccg aatccctttt atcagattta cgaaggtgcg acacttttgg
     1501 gcggcggtga aatccatttt gccaattgcc ccgcgccgtc tttcaacccc gattggcgta
     1561 gtatttccga agaggtttgg aaacgcacca aactggtgtt cgtctgctcg cccaacaacc
     1621 ccagcggcag cgtgctggat ttggacggat ggaaagaagt ttttgatttg caggacaaat
     1681 atggtttcat tattgcctcg gacgaatgct attccgaaat ctatttcgac ggcaacaagc
     1741 ctttgggctg cctgcaggcc gctgcacagt tggggcgaag caggcaaaaa ctgcttatgt
     1801 tcaccagttt gtccaagcgg tccaatgttc caggcctgcg ttccggtttt gtcgccggcg
     1861 atgccgaact gcttaaaaat tttctgcttt acagaaccta tcacggcagc gcaatgagca
     1921 ttcccgtgca gcgcgcaagc attgccgctt gggatgacga acagcacgtt atcgacaacc
     1981 gccgcctgta tcaggaaaaa tttgagcgcg ttattcccat tttgcaacag gtatttgacg
     2041 ttaaattacc ggatgcctcg ttttacatct ggttgaaagt ccccgatggc gacgatttgg
     2101 catttgcacg caatttatgg caaaaagccg ctatccaagt attgcccgga cgttttttgg
     2161 cacgggatac cgaacagggc aatcccgggg aaggttatgt ccgtatcgct ttggttgccg
     2221 atgtcgcaac ttgtgtcaaa gctgcggaag acatagtttc actgtatcgg taaggaatcg
     2281 gaaatgccgt ctgaactttt gttcagacgg catttttcaa tattctacgg ttgaatttgc
     2341 tgtaacggta tttatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgaagacag
     2401 tacagatagt acggcaaggc gaggcaacgc tgtactggtt taaatttaat ccactatact
     2461 tcacttttaa tcggcttgcc cgcaaacacg tttaaactta aaatccccgt gtttgacaca
     2521 ataccgagca gattatgttt tttgtccttt cccctgcgaa gaaccttaat gaaaaagacc
     2581 ctgcccctgt cagcgagttt acccaacccg acctgctggc agagtccgac attctaatgc
     2641 agcagttgcg cgagcttgcg ccgcaacaga ttgccgaact gatgcacgtt tccgacaaaa
     2701 ttgccctctt aaacgcgcag cgcaatgcag aatggaacac gccgtttacg ccggaaaacg
     2761 ccaaacaggc ggtctttatg ttcaacggcg atgtttacga aggtatggat gcaaacacat
     2821 tggatattgg acagatacgc tatctgcaaa accatgtccg cctgctgtcc ggtctgtacg
     2881 gtcttctgcg cccgttagac ctgatacagc cttaccgcct ggaaatggga acgcccttcg
     2941 ccaatttgcg cggcaagaat ttgtatgagt tttggggcga catcattacc aaccttttaa
     3001 atgacacgct tgcccaagca ggcagcaata cgcttgtcaa ccttgcttca caggaatatt
     3061 tcaagtccgt caacacgaaa aaacttcggg cgcggctgat taccccgata tttaaagacg
     3121 aaaaaaacgg caaatataaa attatcagtt tctatgccaa gcgtgcgcgc ggattaatgg
     3181 tgcgctatgc ggcagaacat catattaccg accctgaaat gctgaaaaat tttaattacg
     3241 aaggctacgc attcaatgac gcggcttcca atgaaagcga atgggtgttt atgcgttcgg
     3301 aacaaataaa gtgaaaacaa taaattaagt attttccaaa aaaagtgctt ggcaaaatgt
     3361 ataaacttca ttattattca tcttcttcaa gaagacggaa gcgtggcaga gcggtttaat
     3421 gcaacggtct tgaaaaccgt cgagggttga tagccctccg tgagttcgaa tctcaccgct
     3481 tccgccaatc cttgaggtca aaaaccaaat aaaaatgaag tagcataaag catcggcatt
     3541 tttatttggt tttacttcat tatcggaaac gtggcagaga ggctgaatgc agcggactcg
     3601 aaatccgctg agggtgcaaa tcctccgtgg gttcgaatcc caccgtttcc gccagaaaac
     3661 ataaccgccc tgattcgggg cggttctttt ttgttcaagt tgaaaccttt gcaaaattcc
     3721 tttccctccc gacagccgaa acccaaacac aggttttcgg ctgttttcgc cccaaatacc
     3781 tcctaattct acccaaatac ccccttaatc ctgcccggat acccgataat caggcatccg
     3841 gaccgccttt taggcggcag cgggcgcact tagcctgttg gc
//
LOCUS       DAWGBY010000157         3831 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.157, whole genome shotgun sequence.
ACCESSION   DAWGBY010000157 DAWGBY010000000
VERSION     DAWGBY010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.157"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(308..682)
                     /locus_tag="WHG62_001944"
     CDS             complement(308..682)
                     /locus_tag="WHG62_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1725996.1"
                     /translation="MKNFNVVKESLRELGIKQGFDLYEKATTEKLNSEDPLDLQWLSN
                     YSSDWNDELEEDFDSFFQHMKEYQYAIDNEDIKSACSSLCEAMLYVGNIKNFFEFLKS
                     DMIRLLRGESKTTDFQWPQFDE"
     gene            complement(1147..1521)
                     /locus_tag="WHG62_001945"
     CDS             complement(1147..1521)
                     /locus_tag="WHG62_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ1725997.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDENLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
     gene            complement(1540..3579)
                     /locus_tag="WHG62_001946"
     CDS             complement(1540..3579)
                     /locus_tag="WHG62_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ1725998.1"
                     /translation="MKSSIHTETVSSSKSTLWQKQAGRGSNIETLQLPSFTGPVAPVL
                     SAPGGYIVDIPKGNLKTQIETLTKQPEYAYLKQLQTAKNVDWKQVQLAYDKWDYKQEG
                     LTGAGAAIVVIIVTALTYGYGAAAAGSVTAAGSSTAAAATTTAAATTTVSTAAAMQTA
                     ALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSALTAGALNQMGADIAQLNS
                     KVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNGGSLKDNLGNAALGALVN
                     SFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKDGAIGAAVGEIVAESILG
                     GRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAAEVAVVNNALNFDSTPTN
                     AKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNPQDKDAAIWISNIRNGITGPIVITSY
                     GVYAAGWTAPLIGTAGKAAISTCMANPSGCTVMVTQAAEAGAGIATGAVTVGNAWEAP
                     VGALSKAKAAKQAAPKETINNLANLAKAEQQILFRIAQRDTQLDAWKTGFNNRVRKGA
                     GLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALYRQMTGQNPNFRVLPD
                     GRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPSFIKGTKLELKFQ"
BASE COUNT          909 a          897 c          828 g         1197 t
ORIGIN      
        1 attttgccgt tttccgaact gatatccgtg gtgctgagca ggatgcgact gttctcattg
       61 gcatacggtg cgctaatgct cacaccggtt ttacccgaaa gttctgcagc aagcgtaggg
      121 ggtgtcttca gcacgcacgc gtctgggcag tatataggga atctgaatat ttacttgcat
      181 aacaaatgcc gtctgaaaaa ttgtgagctt ttcagacggc attgagccgt aaatcatgga
      241 acgcgtgcgt gctgaagcac acaccttacg catggatttt aggtttcatg caggctacag
      301 cttgctgcta ttcatcaaat tgcggccatt gaaagtctgt tgttttactt tcacctctca
      361 acagtctaat catatcgctt ttgagaaact caaaaaaatt tttaatatta ccaacataga
      421 gcatagcttc acatagtgaa ctacatgcag atttaatgtc ttcattgtca atagcatatt
      481 gatattcctt catatgctga aaaaaagaat caaagtcttc ttctaattca tcattccaat
      541 cagatgaata gttagaaagc cattgtaagt caagaggatc ttcactattc aatttttcag
      601 ttgtggcttt ctcataaaga tcaaatcctt gtttaattcc taactctctt aaactttctt
      661 ttactacatt aaaatttttc atctgaatca ccttatttaa gattcaattt tcgcccttgc
      721 cctgctaatg tcttagctta attttgagcg agttttaggt ttcatgcaga ctacagctta
      781 ctcagcacac acgagtctaa acagtataca gggaatctaa atatttactt tcataacaaa
      841 tgccgtctga aaaaattgag cttttcagac ggcattgagc cgtaaatcat ggaacgcgtg
      901 cgcgctgaag cacacacctt acgcatggat tttaggtttc atgcaggcta cagcttgctt
      961 ccataaatca tttttatcag agctcgtagg tacggttagc cgcctttagc ggcgtaaccg
     1021 tacgaatgaa atgccaagtt gcaaggccgt ctgaaaaagt tgaaaaacag atttcagacg
     1081 gccttgttat tttataaagt ttgctgatat gcgtacggtt acgccgctaa aggcggctaa
     1141 ccatacctac gcttgctcat aaatatcaat attcggcaaa tcggccaaat ctattggaca
     1201 cgcaatatcc caccaaagcc attctaagta ataccaaggg tcttcaggcc atattgcttg
     1261 ggcatcttcc aaagtaggcc atatgtcttt caatttctgc acttgttctt ttgaagttcc
     1321 agttagagga attccgatac cgtcggtata atcatgtaaa cggattgaac cgtcatttaa
     1381 cagttcttcc ataaaagaac agaaattgtt ttttaagttt tcatcttgaa tattaatacc
     1441 catttgattt ttataagagt taaaaattga ggataaatcg atttgaaaat caagaatctt
     1501 aattttttgt ttctcatcca cggtaaaatc ctttgtaaat tattggaatt taagctccaa
     1561 tttagtacct ttaataaatg atggaggatt ctgcaaatct aatgtccatc gtgcttgagt
     1621 tgaattctct gtttttgaaa aatttcttaa tgcaattttt gttcctgccc attctccagt
     1681 actgataatg ccatttgcta atcttccgtc aggcaaaact ctaaaattcg gattctggcc
     1741 agtcatctgc cgataaagcg caaaaatctc ctgttcgctt acgccgctgt aaacgggtgc
     1801 tccctttaag cttatggctt gtacaggttt gatggttttt ccgttaatgg ttatcggaat
     1861 attacttgca tcaagcaagc ctgctccttt ccttactcta ttgttaaatc ccgtcttcca
     1921 tgcatccagt tgcgtatcgc gttgggcaat acggaataaa atctgctgtt ctgctttggc
     1981 taaatttgcc aaattgttta ttgtttcttt aggagcagct tgcttagccg ccttcgcttt
     2041 cgacaacgct cctactggag cttcccaagc gttgcctacc gttaccgcac ccgtggcgat
     2101 tcccgcgccc gcttcagcag cctgcgtaac catgacagta caaccagaag gattagccat
     2161 acaggtgctg atagctgctt taccagctgt accgatcagc ggagctgtcc aacctgctgc
     2221 ataaactcca tagctggtaa tcacaatcgg gcctgtgatg ccattacgga tattgcttat
     2281 ccaaatggca gcatccttat cctgcggatt agtcatcgca cctgccgcat gtgcaggcat
     2341 aatactttgg atgatttttt ccagtgcggt tttgtcgggc ttctgcggtt gatgcttttt
     2401 cgcattggta ggggtgctgt caaaattcaa agcattattc accacagcta cctcagccgc
     2461 attcgccgca gtattcacat cgccgccgtt gagtgccgcc acgctgcccg caataatctt
     2521 cgagtaactg ataactttat gcttttctgc atcgctgagt gtagcagggt ttctgccgcc
     2581 aagtatggat tcagctacga tttccccaac tgctgcgcca attgccccat ctttacattt
     2641 tccctgtacc agtccgctaa cacaacccgc caaagcgtgg gcgaactgtt tggcaacata
     2701 atcgtcgctg aaggttgttt tgattttgct ggcggcttcc ccttggaagc tattaaccaa
     2761 tgctcccaat gcggcattgc ctaagttgtc tttcaagctg ccgccgttaa cggcggtatt
     2821 gataccagct gagatacctg cattgctgag gttggtggcc aatctgcctc caaggttggc
     2881 aatggtttga ttgcccgtac tgctgaacag ttcggttctt accttgctgt tcaattgggc
     2941 aatatctgct cccatctggt ttaatgcacc cgccgtcagt gcggaagtaa caatctgctt
     3001 gaccgtatca ctggtgccga gatcttttaa tgctttgcct acatcgcctt tattattgat
     3061 gatggctaca gctgcttggc tatacaagga ggctaaagct gcggtttgca tggcagctgc
     3121 agtagaaaca gtggtagttg ctgccgctgt cgttgttgca gctgcggctg tactacttcc
     3181 tgcggcagtt acgctacccg ctgcagccgc tccgtatcca taagttagag cggttacaat
     3241 aatcaccaca atcgctgcac cggctccggt caagccttcc tgtttatagt cccatttgtc
     3301 gtaggccagc tgcacctgtt tccaatcgac gttcttggcc gtctgaagct gtttcaggta
     3361 ggcgtattcg ggctgtttgg tgagggtttc gatttgggtt ttcagattgc ctttgggaat
     3421 atcgacaatg taaccgccgg gtgcggacag tacgggcgca acgggaccgg tgaaactcgg
     3481 caattgcaag gtttcgatgt tactgccccg tcctgcctgt ttttgccata gagtagattt
     3541 gctgctgctc acggtttctg tgtggatgct gcttttgatc ccttcgagga taatcttggc
     3601 atctgcccgt gcctgctcac ctacgcctgc gcgtatggtt gcgccaccca gtgtggtttc
     3661 aaactgtgtg ccttgcagtt tggtatccca gcccgattgg aggttggctg attctgcaac
     3721 tacccttgag ggcagcgcgg ttttcatgac ttgggtggtg gtgtcgtgtg ctttgctgta
     3781 gctgatgccg agaaatctgc gccttttttg gctgtctagt ttgtcgtagt t
//
LOCUS       DAWGBY010000158         3824 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.158, whole genome shotgun sequence.
ACCESSION   DAWGBY010000158 DAWGBY010000000
VERSION     DAWGBY010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.158"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            230..1747
                     /locus_tag="WHG62_001947"
     CDS             230..1747
                     /locus_tag="WHG62_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ1725999.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFLGGISPAVNRNANNAAPQYCQQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1808..3589)
                     /locus_tag="WHG62_001948"
     CDS             complement(1808..3589)
                     /locus_tag="WHG62_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ1726000.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHAVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVKLYQRLRQPVPYAV
                     LSHLPDAQGQSAWTLCFSPELFLKIGSDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGTVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIESLEAEARGLYTGSIGYLNPCSGGLGFEGTFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENGRCALLDRHLCRLKTSAQALNLPLPDGCENQIKQYIARLPDGAFRIKALLASDG
                     ISLSRAVLNHLADKQRVIISPTILPVQNYLRRFKTTHRTLFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFVKYQGQWLTPSLDLDILNGIMRQAVLDEPQKYLHTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
BASE COUNT          796 a          856 c         1260 g          912 t
ORIGIN      
        1 caccaagtga atcgattccg tactatctgt actgtctgcg gcttcgtcgc cttgtcctga
       61 tttttgttaa tccactataa atgtgaaatc cgccctttga aaatcgggcg gcggtttttt
      121 gcctgcccgc tttcagacgg caaagccggt tttcacgggt ttctgcctgt ttttcggatg
      181 gtttgacgtg cttcggcggc gtgtttgccg gaaaggtaaa tgacagggta tgttgtattt
      241 cagatacggc tttttggttg tttggtgtgc ggcaggtgtt tctgccgcct atggggcgga
      301 tgcgcccgcg attttggatg acaaggcatt gttgcaggtg cagcggtcgg tgtcggataa
      361 gtgggcggaa tcagattgga aagttgaaaa tgatgccccg cgcgtggttg acggggattt
      421 tttgttggca catccgaaaa tgttggaaca tagtttgcgc gacgcgctca acggcaatca
      481 ggcggattta atcgcttcgt tggcggattt gtatgccaag ctgccggatt atgacgcggt
      541 tttgtacggc agggcgcggg ctttgctggc gaaattggcg ggaaggccgg cggaggcggt
      601 ggcgcggtat cgggaactgc acggggaaaa tgcggcagac gagcggattt tgctggattt
      661 ggcggcggcg gagtttgacg atttccgact gaagtcggca gaaaggcatt ttgcggaggc
      721 ggcaaaattg gatttgccgg cgccggtttt ggaaaatgtg gggcgttttc ggaaaaaaac
      781 ggaggggctg acgggctggc gttttttggg cggcatcagc ccggcggtca ataggaatgc
      841 caataatgcc gcgccgcagt attgccagca aaacggaggc cggcagatat gcagtgtcag
      901 ccgggcggag cgggcggcag ggttgaatta tgaaatcgag gcggaaaagc tgacggcgtt
      961 ggcggacaat cattatttgt tgttccgttc caatatcggc ggcacgagct attatttcag
     1021 taaaaaatca gcttatgatg acgggttcgg cagggcgtat ttgggttggc agtataaaaa
     1081 tgcgcggcag acggcgggga ttttgccgtt ttatcaggtg cagttgtcgg gcagcgacgg
     1141 ctttgatgcg aaaacaaaac gggtaaacaa ccgccgcctg ccgccgtata tgctggcgca
     1201 cggagtcggc gtgcagctgt cccatactta ccgcccaaac ccgggatggc aattttcggt
     1261 cgcgctggaa cattaccgcc aacgctaccg cgaacaggat agggcggaat acaataacgg
     1321 caggcaggac gggttttatg tttcgtcggc aaaacgtttg ggcgaatcgg caactgtgtt
     1381 cggcggctgg cagtttgtgc ggtttgtgcc gaaacgcgaa acggtgggcg gcgcggtcaa
     1441 taatgccgcc taccggcgca acggtgttta tgccggttgg gcgcaggagt ggcggcagtt
     1501 gggcggtttg aatagtcggg tttccgcgtc ttatgcccgc cgcaactata agggcgttgc
     1561 ggctttctcg acagaggcgc aacgcaaccg cgaatggaat gtctcgctgg ctttgagcca
     1621 cgacaagttg tcgtacaaag gtatcgtacc ggcgttgaat tatcgtttcg gcaggacgga
     1681 aagtaatgtg ccgtatgcga aacgccgcaa cagcgaggtg tttgtgtcgg cggattggcg
     1741 gttttgaatg gtgggaaaat gccgtccgaa ccttgtggaa acaggttcgg acggcatttt
     1801 tgcgtgttca ggcaagggcg gcggcaaata cgccgcgcag ggcgttggag aggcggattt
     1861 cttcggcttc ttgcagtgtt ttttgtgtga tgtgtgtttc gatcacttga tttgtgtgca
     1921 aatatttttg cggttcgtcc aatacggctt ggcgcattat gccgtttaaa atgtctaaat
     1981 ctaaggaggg cgtaagccat tgtccttggt atttgacgaa cacgttgctt ctgccgcctt
     2041 cgagcagaat gccgtccgag ttgaaaaaca ggctgtcgaa cgcgccttgt gtttcggcgg
     2101 tttgccacgc ctggtcgaag agagtgcggt gtgtggtttt gaagcggcgc aggtagtttt
     2161 gtacgggcag gatggtcggc gaaatgatga cgcgctgttt gtcagccaaa tggtttaaaa
     2221 cggcgcggga caggctgatg ccgtctgaag cgagcagggc tttgatgcgg aacgcgccgt
     2281 cgggcaagcg tgcgatgtat tgtttgattt gattttcgca accgtcgggc aggggcaggt
     2341 tgagggcttg ggcggaggtt ttcagacggc ataggtggcg gtcgagcagg gcgcagcgtc
     2401 cgttttccac gcgcagggtt tcaaaaatgc cgaagtcggg gcgcaattcg ttgaggaaac
     2461 gggctttcca gccgcattcc cgatattcgg cggcagggtc gctgtcgatg acgatgccgg
     2521 aaccgacacc gtacacgcct tgataaatgc cgtctgaaag cggcgtgagc gacaaggtgc
     2581 ggataacgac gttgaacgtg ccttcaaacc ccaagccgcc ggaacacggg ttcaaatagc
     2641 cgatgctgcc cgtataaagt ccgcgcgctt cggcttcgag cgattcgata atctgcatac
     2701 tcattttttt gggcgcgccg gtgatgctgc cgcaggggaa ggcggcgcgg aggatgtcgg
     2761 cgaacgaggt gtgcggcaag gcttgggctt ggatggtgct ggtcatctgc caaacgctgc
     2821 cgaaacgcga tactttaaac ggttcgggta cgcatactgt gccggtttgg gcgattttgc
     2881 cgaggtcgtt acgcagcaaa tcgacaatca tcacgttttc ggcgcggttt ttcgggtctg
     2941 cttgcaactc ggcggcgcgg cgttcgtctt gtccgtcgcc caaaatcggc gcggtgcctt
     3001 tcatcggttc ggtgctgatg gtgccgtccg aaccgatttt gaggaagagt tcgggcgaga
     3061 aacacagcgt ccacgcggat tgcccttgtg catcgggcag gtgggacaaa acggcatagg
     3121 ggacgggctg gcgcaggcgt tggtaaagtt tgacgggatt gccgtaggct tgcaggtgca
     3181 ggcgggtagt gtagttgatt tgataggtgt cgccgcgtcg gatggcttcg tggatttggc
     3241 ggatatggtc gaggtaatcg gcttcggata cggaggattg cggcgtggaa atgccggcgg
     3301 ggaggccgtc tgagtgtcgg gcaagccagc ttgcggcatc ggtgtcggcg cagtcggcaa
     3361 accagtgcag ggcaaggttg ccgccgcgtt cggactcgac ccccgtcagc ggcaaaccga
     3421 atccgtagtc tgcaaacaac acggcatgca gccctttttg ccagcccgat tgcagcgcgc
     3481 cgtccaaagc atcgagttct tcgggacgga aaaaacggct ttccacatga ttttgatagc
     3541 gttttgcgcg gccgcttacg gcatcgtcaa acagggcgaa ataaggcatg gcaattcggg
     3601 gcaaatgttt tgattatacg ctctttttac acatattttc agacgattcg gcaaatatcg
     3661 gcaaaatgta attttatgta gagaaagtgg ggggcgaagg tgtaaaattg tgaaaacaaa
     3721 ttccgatttc caacctgaaa tacaataagg agacctttat gacagaccac cagctgcaac
     3781 cgtttgaaaa cgtagaatta ggcgaaaagc aagatcagct ccaa
//
LOCUS       DAWGBY010000159         3805 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.159, whole genome shotgun sequence.
ACCESSION   DAWGBY010000159 DAWGBY010000000
VERSION     DAWGBY010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3805
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.159"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            361..3561
                     /gene="nalP"
                     /locus_tag="WHG62_001949"
     CDS             361..3561
                     /gene="nalP"
                     /locus_tag="WHG62_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HEZ1726001.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGTSAPDFNAGGT
                     GIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHTG
                     DFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNEN
                     YKNYTAYMRKEAPEDGGGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIGG
                     RSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTTS
                     RAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFIF
                     SASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAPY
                     EASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAVG
                     VDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGSQ
                     LQLHGNNTYTGKTVIEGGSLVLYGNNESDMRVETKGALIYNGAASGGSLNSDGIVYLA
                     DTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAIIGGKLYMSARGKGAGYLN
                     RTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNAA
                     RTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGIR
                     PYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHNA
                     TGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTWSEN
                     SANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLMQ
                     LGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGL
                     KLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLG
                     ADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1025 a         1034 c         1011 g          735 t
ORIGIN      
        1 cggaaccgat tcacttggtg cttcagcacc ttagagaatc gttctctttg agctaaggcg
       61 aggcaacgcc gtactggttt ttgttcatcc actataacta gggaaattca aattaagtta
      121 gaattatccc tatgagaaaa agccgtctaa gccggtataa acaaaataaa ctcattgagc
      181 tatttatcga aagttcaaat ttccatttta aaacaattag taaaatcgag tttatcctag
      241 ttgtccaaga caacccctat aataatataa ttcaaaatat aaaaacgggt tacatctaaa
      301 cattacggaa tttttattcc ctcgcctgaa ttctattgtc agattcaagg agacctcatc
      361 atgcgaacga ccccaacctt ccctacaaaa actttcaaac cggctgccat ggcgttagct
      421 gttgcaacaa cactttctgc ctgcttaggc ggcggcggca cttctgcgcc cgacttcaat
      481 gcaggcggca ccggtatcgg cagcaacagc agggcaacaa cagcgaaatc agcagcagta
      541 tcttacgccg gtatcaagaa cgaaatgtgc aaagacagaa gcatgctctg tgccggtcgg
      601 gatgacgttg cggttacaga cagggatgcc aaaatcaatg cccccccccc gaatctgcat
      661 accggagact ttacaaaccc aaatgacgca tacaagaatt tgatcaacct caaacctgca
      721 attgaagcag gctatacagg acgcggggta gaggtaggta tcgtcgatac aggcgaatcc
      781 gtcggcagca tatcctttcc cgaactgtat ggcagaaaag aacacggcta taacgaaaat
      841 tacaaaaact atacggcgta tatgcggaag gaagcgcctg aagacggagg cggtaaagac
      901 attgaagctt ctttcgacga tgaggccgtt atagagactg aagcaaagcc gacggatatc
      961 cgccacgtaa aagaaatcgg acacatcgat gtggtctccc atattattgg cgggcgttcc
     1021 gtggacggca gacctgcagg cggtattgcg cccgatgcga cgctacacat aatgaatacg
     1081 catgatggaa ccaagaacga aataatgtct gcagccatcc gcaatgcatg ggtcaagctg
     1141 ggcgaacgtg gcgtgcgcat cgtcaataac agttttggaa caacatcgag ggcaggcact
     1201 gccgaccatt tccaaatagc caattcggag gagcagtacc gccaagcgtt gctcgcctat
     1261 tccggcggtg ataaaacaga cgagggtatc cgcctgatgc aacagagcga ttacggcaac
     1321 ttgtcctacc acatccgtaa taaaaacatg cttttcattt tttcggcaag caatgacgca
     1381 caagctcagc ccaacacact gaccctattg ccattttatg aaaaagacgc tcaaaaaggc
     1441 attatcacag tcgcaggcgt agaccgcagt ggagaaaagt tcaatggctc caaccattgc
     1501 ggaattactg ccatgtggtg cctatcggca ccctatgaag caagcgtccg tttcacccgt
     1561 acaaacccga ttcaaattgc cggaacatcc ttttccgcac ccatcgtaac cggcacggcg
     1621 gctctgctgc tgcagaaata cccgtggatg agcaacgaca acctgcgtac cacgttgctg
     1681 acgacggctc aggacatcgg tgcagtcggc gtggacagca agttcggctg gggactgctg
     1741 gatgcgggta aggccatgaa cggacccgcg tcctttccgt tcggcgactt taccgccgat
     1801 acgaaaggta catccgatat tgcctactcc ttccgtaacg acatttcagg cacgggcggc
     1861 ctgatcaaaa aaggcggcag ccaactgcaa ctgcacggca acaacaccta tacgggcaaa
     1921 accgttatcg aaggcggttc gctggtgttg tacggcaaca acgaatcgga tatgcgcgtc
     1981 gaaaccaaag gtgcgctgat ttataacggg gcggcatccg gcggcagcct gaacagcgac
     2041 ggcattgtct atctggcaga taccgaccga tccggcgcaa acgaaaccgt gcacatcaaa
     2101 ggcgatctgc agctgggcgg cgaaggtacg ctgtacacac gtttgggcaa actgctgaaa
     2161 gtggacggta cggcgattat cggcggcaag ctgtacatgt cggcacgcgg caaaggggca
     2221 ggctatctca accgtaccgg acaacgtgtt cccttcctga gtgccgccaa aatcgggcgg
     2281 gattattctt tcttcacaaa catcgaaacc gacggtggtc tgctggcttc cctcgacagc
     2341 gtcgaaaaaa cagcgggcag tgaaggcgac acgctgtcct attatgtccg tcgcggcaat
     2401 gcggcacgga ctgcttcggc agcggcacat tccgcgcccg ccggtctgaa acacgccgta
     2461 gaacagggcg gcagcaatct ggaaaacctg atggtcgaac tggatgcctc cgaatcatcc
     2521 gcaacacccg agacggttga aactgcggca gccgaccgca cagatatgcc gggcatccgc
     2581 ccctacggcg caactttccg cgcagcggca gccgtacagc atgcgaatgc cgccgacggt
     2641 gtacgcatct tcaacagtct cgccgctacc gtctatgccg acagtaccgc cgcccatgcc
     2701 gatatgcagg gacgccgcct gaaagccgta tcggacgggt tggaccacaa cgctacgggt
     2761 ctgcgcgtca tcgcgcaaac ccaacaggac ggtggaacgt gggaacaggg cggtgttgaa
     2821 ggcaaaatgc gcggcagtac ccaaaccgtc ggcattgccg cgaaaaccgg cgaaaatacg
     2881 acagcagccg ccacactggg catgggacac agcacatgga gcgaaaacag tgcaaatgca
     2941 aaaaccgaca gcattagtct gtttgcaggc atacggcacg atgcgggcga tatcggctat
     3001 ctcaaaggcc tgttctccta cggacgctac aaaaacagca tcagccgcag caccggtgcg
     3061 gacgaacatg cggaaggcag cgtcaacggc acgctgatgc agctgggcgc actgggcggt
     3121 gtcaacgttc cgtttgccgc aacgggagat ttgacggtcg aaggcggtct gcgctacgac
     3181 ctgctcaaac aggatgcatt cgccgaaaaa ggcagtgctt tgggctggag cggcaacagc
     3241 ctcactgaag gcacactggt cggactcgcg ggtctgaagc tgtcgcaacc cttgagcgat
     3301 aaagccgtcc tgtttgcaac ggcgggcgtg gaacgcgacc tgaacggacg cgactacacg
     3361 gtaacgggcg gctttaccgg cgcgactgca gcaaccggca agacgggggc acgcaatatg
     3421 ccgcacaccc gcctggttgc cggtctgggc gcggatgtcg aattcggcaa cggctggaac
     3481 ggcttggcac gttacagcta cgccggttcc aaacagtacg gcaaccacag cggacgagtc
     3541 ggcgtaggct accggttctg acggacagga agcagacagc cgcaaagatc acggtctttg
     3601 cggctgtttc ttatgaaaag aaaaccctat tccaattgcc tgcttctatt gtttcaagac
     3661 ttcttccaaa gattcggcat taatcagatg tatagcggat taacaaaaat caggacaagg
     3721 cggcgaagcc gcagacagta caaatagtac ggaaccgatt cactcggtgc ttgagcacct
     3781 tagagaatcg tttctttgag ctaag
//
LOCUS       DAWGBY010000160         3725 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.160, whole genome shotgun sequence.
ACCESSION   DAWGBY010000160 DAWGBY010000000
VERSION     DAWGBY010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.160"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(229..552)
                     /locus_tag="WHG62_001950"
     CDS             complement(229..552)
                     /locus_tag="WHG62_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ1726002.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(632..1288)
                     /locus_tag="WHG62_001951"
     CDS             complement(632..1288)
                     /locus_tag="WHG62_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ1726003.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            complement(1390..1893)
                     /locus_tag="WHG62_001952"
     CDS             complement(1390..1893)
                     /locus_tag="WHG62_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ1726004.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRF
                     EASRQAA"
     gene            2077..2850
                     /locus_tag="WHG62_001953"
     CDS             2077..2850
                     /locus_tag="WHG62_001953"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ1726005.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            2857..3207
                     /gene="secG"
                     /locus_tag="WHG62_001954"
     CDS             2857..3207
                     /gene="secG"
                     /locus_tag="WHG62_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ1726006.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            3221..3306
                     /locus_tag="WHG62_001955"
     tRNA            3221..3306
                     /locus_tag="WHG62_001955"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3255..3257,aa:Leu,seq:gag)
BASE COUNT         1013 a         1192 c          788 g          732 t
ORIGIN      
        1 gcagcctgca cattgaaaat gccgcccaag caaactttca gtttgccagc ctcgtcctag
       61 ccctctccca cggggagagg ggattggggt gcaggctgcc tttaaggttc aggcaaattt
      121 taacttcgtt gataccgcgc tttagcttcg cagaagctgc actttcagac gaccttttgg
      181 aacaccacag gtacacgcat ttaaggaatg ccgtctgaaa tgcctgcctc aataacgcat
      241 catgttgccg tcaatctcgg ccgcccatgc atcgatgccg ccctgaaggt tgtacaggtt
      301 ttcaaaaccc gcgtccgcca gatacatcgc cgtatgcagg ctgcggatac cgtgatggca
      361 atacaccaca agcggcacat catccggcag ctcgttctgc cgcagcggaa tcagattcat
      421 cgggatatgc agcgcatttg gcagcgaaca aaccgccgtt tcttcatccg tacgcacgtc
      481 caacaaacaa aacatccgcc cttcgtccat ccacgccttc aattccgccg acccaagttg
      541 cacaatatcc atcgcacccc ccaaaaaaaa accaagcaaa atgccgtctg aagccccaaa
      601 cccgctttca gacggcatcg caatccgaac atcaaaactg aaaaccgcca aacggatcgg
      661 catccttatc atccaaatgc gccaccaagg tatcgaacag caccttctct tcaaacacat
      721 cgcccttgcg cgtaatcaaa agcgcgcgct gaacaggctt gcggcctacg ataaccacca
      781 tgcgtccgcc atctttcaac tgttctttca acacttcagg cacaaggttt accgcaccgc
      841 cgacataaac cgcatcaaac ggcgcacctg cggaaagttc ggtcaacccg ttgttttgca
      901 cataatcgat attgtccaaa cccaagccgt ccaacaccgc tttggcgcgg ttttgctgtt
      961 cggcatcgat gtcgtccgac accacacgac cagccaattt tgccaacagc gcggtcgcat
     1021 agcccgaacc cgtgccgatt tccaaaaccg tatcgttttt cgtcagcttc aagccctgcg
     1081 ccagccgcgc cacgactttc ggctcgagca tcttatgacc gttggcaagc ggcagcgcca
     1141 tatccgcata cgccaaaccc tgcaagtcct catcgacaaa aagctcgcgc ggaatctccg
     1201 ccaaagcgtc caaaacgtca aaatccaata catcccaagg acggatttgc tgttcgacca
     1261 tattgaaccg cgctttttca aaatccattt agtgctccgt caaataattg ttccaacaat
     1321 agcaggcatt ataaaaccac actcccgccg cgccaacttc ggcacgcgcc gcccgcccct
     1381 ttccatcact caagccgcct ggcgcgaagc ctcaaaccgc ttctccaaaa tcttcgccag
     1441 ttcgcccaaa tacaaagcat ctgtctcatc aaactgcgcc aaatgttcgc tgtccgcgtc
     1501 caacacgccg atacagcggc cgtctgaaaa cagcggcacg acaatctccg aacgcgacaa
     1561 agacgaacag gcaatatggt cgggatgcgc gtccacatcc ccgacgacca ccgtcccgcc
     1621 cttcgcccaa gcctgaccgc acaccccgcg accgaacgga atccgcgtac acgccaaagg
     1681 cccctgaaac ggtgccaaaa ccaattcgtc cgaacgcgta tcgaccaaat aaaaacccac
     1741 ccaaaaccaa ccgaacgcct ccttcaaaac cgccgccgtg ttcgccaaat tcgccaccca
     1801 atccgtctcg tccgccacca cagactcaat ctgcggcaac acctcccgat aaagcgcggc
     1861 cttgtccgaa gccgaaaaat gaagcgcgtg catcacatct cctatagttg catacatatc
     1921 aggcggccat tataaaacaa cctgcccgaa acaacattcc aaaccgcccc cgcagccgcc
     1981 cgccccaagt tgcgaacccg ccgcatatcc actaaacttc acattgcaac gcgccacacg
     2041 cggcagacag aaaaaacacg acacggagca aaaaagatgt atcaccaaat cggaatgtgg
     2101 gatcaaaaat gggtcatcgg caactggaaa atgaacggcc ggctccagaa caacaattcg
     2161 ctcatgcacc gcttccgcat cctccccacc gccgaacgcg tcctcatcgg actcgccgcc
     2221 ccgaccgttt acctgctgca actgcacaac gccatgcaaa tcgtcttaaa caaccgcatc
     2281 ctcacctgcg cccaagacgt gagccgcttc cccgacaacg gcgcgtacac cggcgaagtg
     2341 tccgccgaaa tgctcgccga caccggcaca gacatcgtcc tcatcggaca ctccgaacgc
     2401 agcctttatt tcggcgaaaa aaacgaaatc caacgccgca aaatggaaaa cgtcctcaac
     2461 gtcggactca tcccgttatt gtgcgtcggc gaaagcctcg aagagcgcga agccggcaaa
     2521 gaacacgaag tcatcgccca tcagctttcc atcctccaag gactggacac caaaaacatc
     2581 gccgtcgcct acgaacccgt ctgggcaatc ggcaccggca aagtcgccac cgtcgaacag
     2641 attgccgata tgcacgcatt catctacaaa gaaatcttgt ctttgtgcgg aagcgatgtt
     2701 aaaatccgcg tcctttacgg cggaagtgtg aaagcggaca acgcggccga catcttcgca
     2761 gtaccttatg tggacggcgc actcgtcggc ggcgcgtcat tgtcgtacga ctcctttacc
     2821 gccatcatca gtgccgcaca aaatgcgtag aaaaatatgg aagccttcaa aaccctaatt
     2881 tggattgtta atataatttc cgctttggcc gtcatcgtgt tagtattgct ccaacacggc
     2941 aaaggcgcgg atgccggcgc gactttcgga tcgggaagcg gcagcgcgca aggcgtattc
     3001 ggctctgccg gcaacgctaa cttcctcagc cgctcgaccg ccgttgcagc aacatttttc
     3061 tttgcaacct gcatggctat ggtgtatatt cacacccaca cgacaaaaca cggtttggac
     3121 ttcagcaacg tacaacaaac tcagcaagca cccaaacccg taagcaatac cgaaccttct
     3181 gcccctgttc ctcagcagca gaaataacag tttttcaaat gccgacatgg tgaaattggt
     3241 agacacgcta tcttgagggg gtagtggccg taggctgtgc gagttcaaat ctcgctgtcg
     3301 gcaccaacac acaaaaacgc ctgaaaattt caggcgtttt ttgttcaatc ccatccaacg
     3361 ctgtcaacca attccaatca atacaaggat ttcaggctga ttgttatcct gccgtccccc
     3421 ttcctgacag tgcaatcccg tccaatccgc cctaattgaa gtaacctaaa atttacggta
     3481 tcttttgcgg tatctgaaaa atacctcgaa aaaataccgc aaaaataaag ctgaacgacc
     3541 gccaaatcag gaatgccaag cggaaaagag cttgcgggga atactgccaa gacgtaggga
     3601 acaaggggga aaccgtccaa gatgcagggc ggtttttttt gggtttttgg aaaaaaccta
     3661 tactaggaag cgataccctt agttgttacc ttgttaccgg ggaaaagtta gataaataag
     3721 catat
//
LOCUS       DAWGBY010000161         3528 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.161, whole genome shotgun sequence.
ACCESSION   DAWGBY010000161 DAWGBY010000000
VERSION     DAWGBY010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.161"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(231..1295)
                     /locus_tag="WHG62_001956"
     CDS             complement(231..1295)
                     /locus_tag="WHG62_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ1726007.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRDCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLYALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTDRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTENIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAGH
                     QCVANRFTINHTADKLLDAI"
     gene            complement(1296..2054)
                     /locus_tag="WHG62_001957"
     CDS             complement(1296..2054)
                     /locus_tag="WHG62_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ1726008.1"
                     /translation="MKKVSVLIVAKNEANHIQECIESCRFDKEVIVIDDYSTDNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAKKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2129..2204)
                     /locus_tag="WHG62_001958"
     tRNA            complement(2129..2204)
                     /locus_tag="WHG62_001958"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2169..2171),aa:Ile,seq:cat)
     gene            complement(2258..3394)
                     /locus_tag="WHG62_001959"
                     /pseudo
     CDS             complement(2258..3394)
                     /locus_tag="WHG62_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3339..>3528)
                     /locus_tag="WHG62_001960"
     CDS             complement(3339..>3528)
                     /locus_tag="WHG62_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ1726009.1"
                     /translation="CDKLDVSSFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY
                     SGLARTFPRIGSATGCAD"
BASE COUNT          801 a          845 c          930 g          952 t
ORIGIN      
        1 gtactggttt ttgttagtct actatacatt gtaacaaagc acttgatgcg gcagcacaag
       61 ccggggaaga cgctgcaaaa ctttgccaat aggctgcgta atatcggggg atattgggat
      121 tttcttattt ttaaggatgg attcggggtg tttctttcca atgaacgaat ataatttggc
      181 ggtttgttgc atcaaaggct ttcagacggc atatgccgtc tgaaagcagt ttatattgca
      241 tccaataatt tgtcggcggt atggttgatg gtaaaacggt tggcgacgca ttgatgtcct
      301 gccgttgcca gtgcgttttt cgtttcaggg ttcaagacga ggcgttcgat ttcgtccgcc
      361 aaagattcag gtgtcagcct gtccagcaga atccccgatt gatgatgttc gataatttcc
      421 ttttgcgccc ccaaagtatt ggaaatcacc gccgttcggc agtacatcgc ctcgcataat
      481 gacaaaccga atgcctccgg gacgaggctg ggcaaaacca cgacatcgct ttggcggtaa
      541 aacgaagcaa tgttttcggt aaacccttca aaagaaacaa atggttctgc tcctgaagca
      601 gatacgtccc gcttcaggcg gcacatataa tcaggatgtc cgtgccctgc caatttgagt
      661 ctgatttgag gatatttccg atgcaatatc acacaggctt caattaggtt ttccaatcct
      721 ttttccggac tgatcctgcc ggcgtaggcg acggtaaaaa aacggctgtc gggtttttct
      781 tgagagggag ggaagcgatc ggtatcgata ccgttatgaa caatccggta tttttcttta
      841 aagggattgt cggcggtttg cacatcgtaa accagacggg aaacgcaaat aaagcggtcg
      901 gtgtttttct gtatcaggcg gtgataaaaa tcagttttgt tggcgacaac attatgtttg
      961 acaaatatca ggcgcacccc ggtcagtttt ttcaaaagta tggataaggc ggcaattttg
     1021 ccggtgtgta tcatcaggtg ggaaatgcgg tttttccgga taaagcgggt aagtgcgtag
     1081 agcgaaaaca gcccgttgag cgtgtgaagg cgcgttgtga aaacggaaga aacttcggaa
     1141 aatcgcctgt gcatcaattc attattttta ttgacggcgg taaacattgt gcagtcccga
     1201 agccccaatg cttttgaaac atcatagaca tattgttcgc ctccacccca aatcttggcc
     1261 gatacgatat ttaatatcct gaattctttt tccatttaaa attttccgcc ggatttgtac
     1321 agataatata gtttgacata tttaatcatc gtgtaatagc tgtggttgac ggacataatc
     1381 caacccattt ttccatcaag aaaccctttg ttcaggatat aaattttgaa aaacccccaa
     1441 atcgggcgga ggataatgtc cctaacgaaa cgcacgggct ttccctgctc tcggtatttt
     1501 ttggctgaaa tggaagtata tttgttgaac ttgttgaaat attgttccca gttgtcgtac
     1561 gtgtaatggt acataaaatg cttcagacgg cgtttggggt agggggtttg tacggtttcg
     1621 tgtactttgc cttgcaccga actgtctttt ttcggcatca gacggcatac gctgtcggga
     1681 cgcatcgcgc cgtgtgtggc gggatggttg gggaaaaggt tgcggcgttc gacaaaatag
     1741 gcggcataat cgccggtttg gacaattttt gagatttcat cagatagttc cggcgtgcag
     1801 cgttcgtctg catcaatcag gaaaacccat tctccgcctg cctgttcgat ggcaaatgtt
     1861 ttttgcgctc cgaaatcccc attcaaatgc cgtctgaaga cttttgcgcc caaaccctcg
     1921 gcaatttcgg cagtattgtc ggtgctgtag tcgtcgataa cgatgacttc tttatcgaaa
     1981 cggcaacttt caatacattc ctgaatgtgg tttgcttcgt ttttggcaac aatcaatacg
     2041 ctgacttttt tcattatcaa ggtttctcaa agcattttgg tttcacaggg cggcaaaaaa
     2101 gcccaaacat acgtccgggc ttgggaattg gtgggtccgg tggggttcga acccacgacc
     2161 aagggattat gagtcccctg ctctaacccc tgagctacag acccgtcaag agtaggcgcg
     2221 tattgtatag catagtggtg ggattgacaa acttatttca tccgatgatt aagacgcagt
     2281 tgcttcctcc gaaggcaaac gacgagctgg cggcaatgtg tttttccgtt gtctagaagc
     2341 tgccgctgcc ggtcaggtta atggcgggca ggtcggggtc gttctgcccg tcccaaagct
     2401 ggggcggaag ttttccttcg ggattgcttt gccggtcggc aaagccccac gcgaacgcgg
     2461 cttcgattgc gcccgccgca cccagcgtgt gtccggtttg cggcttggtg gacgtgcagg
     2521 gcgtattgtt gccgaaaacc gctgcaacgg cacggctttc catactgtcg ttgtggtgcg
     2581 tcccggtgcc gtgcagatta atccagccga tgtcttcggg cgcaagacct gcgtgttgca
     2641 atgccgtctg aaaggcaagg attgcgcctt gcgcgtcggg gcggggcgtg gaaatatggt
     2701 aggcatcgct gttggctccg tagccgacga gttcggcgta aattatcgca ccgcgccgtt
     2761 tggcgtgttc caattcttcc agcacgaaaa tccccgcgcc ttcgccgatg accagcccgt
     2821 cgcggttcgc gtcgtatggg cgcggggttt tttccggttc gccgttgcgg cggctggcgg
     2881 cataaagcga gtcgaaaaca tacacttcgg acgggaaaaa ttcttcgcct ccgcccgcca
     2941 gcatcatatc ggtcagaccg tatttgatgg cttcgtaggc ataacctatg ccttggctgc
     3001 cggacgaaca cgcgctcgat gtcgggatga tgcgtccttt cagtccgaaa aagatgccga
     3061 tattggcggc ggcggtgtac ggcatcatac gcacataggt gttggcactg aagttgcgcg
     3121 acatgccggt cagcaacaat tcgcctacat cgccgatgtc tttggtgctg ccgctggaag
     3181 agccgcaggc aacgcccatc cgtccgtcgg taatgctttc gtccccgagc aaaccggcat
     3241 ccgtcaaagc ctgctccgcc gcatcgacgc acaaatacga cacacgcccc atacttctga
     3301 gctgcttgcg cgtccaatgt ttcggcggcg cgtaatcctc aatcggcgca cccagttgcg
     3361 cttccaattc ggggaaacgt tcgtgccaat ccactatatt ttcgcaagac gcgttttgcc
     3421 tgattccaaa agttctcaat gccgttaatg tggttttgac ggtctgcaaa ttccttggaa
     3481 tggttgatgc ggtaatggat aaaactgctc acgtccaact tgtcgcag
//
LOCUS       DAWGBY010000162         3491 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.162, whole genome shotgun sequence.
ACCESSION   DAWGBY010000162 DAWGBY010000000
VERSION     DAWGBY010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.162"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            207..1679
                     /gene="pyk"
                     /locus_tag="WHG62_001961"
     CDS             207..1679
                     /gene="pyk"
                     /locus_tag="WHG62_001961"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ1726010.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQVEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            1989..3392
                     /locus_tag="WHG62_001962"
     CDS             1989..3392
                     /locus_tag="WHG62_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ1726011.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLNSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNDRHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKNIANGKKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRM
                     NSLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSAR
                     FKNHADIIGLQYTYKFK"
BASE COUNT          907 a         1052 c          886 g          646 t
ORIGIN      
        1 aaataaattt agcctaagtc ataaaaccgt gtaattttgc accaaaaaag gcggtttgca
       61 ggtaaaatat caaactatta atttaaatca tatttttaca gaatattccg ccgcgttcat
      121 caaatggcat caaaccggtt ccaaatttct gtaattttgc aacaaaatac cgcaaaacac
      181 ccgattgaga ccgaaaggac tttcatatga accagacaag ccgcgatctg acccgcatca
      241 gccacaacac caaaatcgtc gccacccttg ggccgggcag caacaacgta gaactgttgg
      301 aagatatgat ccgcgtcggc ggcctgaacg tcgtccgctt caacttcagc cacggcacgc
      361 ccgaattcca tcaggaaaac gcccgcatcg tgcgcgaggc ggcaaaacgc gccggacagg
      421 aaatcgccat cattgccgac ctgcagggcc cgaaaatccg cgtgggcaaa atcgccggcg
      481 gcggcatcga attgaacaaa ggcgaaacgc tggtactgga tgccgcgctc gaaggcgaag
      541 gcacgcgcga ggcggtcggt ttggactacc gcgacctgcc cgacgacgtt gccgcaggcg
      601 atgtcttgtg gctggacgac ggcctgctga ccctgaccgt ggaatccgtc gaaggcagca
      661 ggattatcac aagggtggaa aacagccacg tcctgaaaag caacaagggc atcaacaaac
      721 gcggcggcgg tctgtccgca ggcgcgttga ccgaaaaaga cttccgcgac ctgaaaaccg
      781 cgattgccat cggttgcgac tatctcgcca tcagctttgt gaaatccgcc gaagatttgc
      841 acatcgcgcg cgccaaagtc gaagaagaaa tgaaaggcag cacggccgtg cgccccggtt
      901 tggtttccaa aatcgaacgc gtagaagcga ttgaaaacct tgatgaaatc atcctcgccg
      961 gcgacggcat tatggttgca cgcggcgact tggcggtcga agtcggacac gccgccgtcc
     1021 ccgccctgca aaaacggatg atccgccgcg cccgcgagtt gcgccgcttc agcattacgg
     1081 cgacgcaaat gatggaatcg atgattacca accccgtgcc gacccgcgcg gaagtcagcg
     1141 atgtggcaaa cgcggtattg gacggcaccg atgcggtgat gtgttccgcc gaaaccgccg
     1201 tcggcgcgta tccgtttgaa accgtcagcc aaatggcgat tatctgcgcg gctgcggaaa
     1261 aagagcagga ttcgctcaac ggcgttgccg aacaggtcga gtatcccgaa gcggtcagca
     1321 ccaacctggc ggttgccggc ggtgcggtca gcgtggcgcg cgcggttcac gccaaagcca
     1381 tcgtcgccct gaccgaaagc ggttcgaccg cctttgaaat cagccgccac aacatcaccc
     1441 tgccgatttt cgcgctgacc ccgagcgttt ccgcccaacg ccgtatggcg atgtaccggg
     1501 gcgtgcgccc gctgattttg gcaaccagca ccgaccacga cacggcgtta aacgaagtcg
     1561 aaaccatgct ggtggaacac aacatcctgc attccggcga ccaatacatc attaccagcg
     1621 gctcgcaaat gcgcgaatcc ggttcgacca atacgctgga agtgctgcgc gtcaaataat
     1681 ccgccctgag tggaaaatgc cgtctgaagt cgatgcccga ggcttcagac ggcatttttt
     1741 gcggcggcgc ggcggttcgg gcaaactctg aaaaaattgt gcaaatccgg caacatcgga
     1801 taaaatcgag tacctatact aaagcgaaac aaggcatttc cgactgcctt ttttatagtg
     1861 gattaaattt aaaccagtac ggcgttgcct tgccgtacta tctgtactgt ctgcggcttc
     1921 gtcgccttgt cctgattttt gttaatccac tatatttatc caccgtccgc ctttttacgg
     1981 aaaccgaaat gaccccttcc gcactgaaaa aaaccgtcct actgctcggc actgcctttg
     2041 ccgccgcatc cgcacaagcc tccggctacc acttcggcac acagtcggtc aacgcgcaaa
     2101 gcacggcaaa tgccgccgcc gcagaagccg ccgacgcatc gaccatcttc tacaaccctg
     2161 ccggcctgac caaactcaac agcagccaga tttccgtcaa cgccaacatc gtgctgccca
     2221 gcattcatta tgaggcggat tccgccaccg actttaccgg gcttcccgtc caaggttcga
     2281 aaagcggcaa aatcaccaaa accacggtcg cgccccacat ctacggcgca tacaaagtca
     2341 acgacaatct gaccgtgggc ttgggcgtgt acgtcccctt cggctctgcc accgaatacg
     2401 aaaaagattc cgtgttgcgc cacaacatca acaaactcgg tctgaccagc atcgccgtcg
     2461 aacctgtcgc cgcatggaaa ctcaacgacc gccattcctt cggcgcaggc atcatcgccc
     2521 aacatacttc cgccgaactg cgcaaatatg ccgactgggg gattaagagt aaagcagaga
     2581 tattgacggc aaaaccgccc aaacctaacg gtgtagccga agctgcaaaa attcaggccg
     2641 acggacacgc cgatgtcaaa ggcagcgatt ggggcttcgg ctaccaactg gcgtggatgt
     2701 gggacatcaa cgaccgtgcg cgcgtgggcg tgaactaccg ttccaaagtc tcgcacacgc
     2761 tcaaaggcga tgccgaatgg gcggcagacg gcgcggcggc gaaagcaatg tggagtacga
     2821 tgcttgcagc aaacggctac acggcgaatg aaaaagcccg cgttaaaatc gttacgcccg
     2881 agtctttgtc cgtacacggt atgtacaaag tgtccgacaa agccgacctg ttcggcgacg
     2941 taacttggac gcgccacagc cgcttcgata aggcggaact ggtttttgaa aaagaaaaaa
     3001 atattgctaa tggcaaaaaa tccgaccgca ccaccatcac gcccaactgg cgcaacacct
     3061 acaaagtcgg cttcggcggc tcttatcaaa tcagcgaacc gctgcaactg cgcgccggca
     3121 tcgcttttga caaatcgccc gtccgcaacg ccgactaccg catgaacagc ctgcccgacg
     3181 gcaaccgcat ctggttctcc gccggtatga aataccatat cggtaaaaac cacgtcgtcg
     3241 atgccgccta cacccacatc cacatcaacg acaccagcta ccgcacggcg aaggcaagcg
     3301 gcaacgatgt ggacagcaaa ggcgcgtctt ccgcacgttt caaaaaccac gccgacatca
     3361 tcggcctgca atacacctac aaattcaaat aaacggcccg ccgtttgaat gtaacaatgc
     3421 cgtctgaaac agatttccgt ttcagacggc attgttttag gcgcgattta tagtggatta
     3481 acaaaaatca g
//
LOCUS       DAWGBY010000163         3476 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.163, whole genome shotgun sequence.
ACCESSION   DAWGBY010000163 DAWGBY010000000
VERSION     DAWGBY010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3476
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.163"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..137)
                     /locus_tag="WHG62_001963"
     CDS             complement(<1..137)
                     /locus_tag="WHG62_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ1726012.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDRVIDWQPIEQYLNRQRTR
                     YL"
     gene            complement(361..2493)
                     /locus_tag="WHG62_001964"
     CDS             complement(361..2493)
                     /locus_tag="WHG62_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ1726013.1"
                     /translation="MSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPVKRLAMATLPALVWCDDGNHFILAKTDGGGEHAQYLIQ
                     DLTTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSV
                     LDLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQS
                     FLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVT
                     VATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDI
                     LNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSG
                     SGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNI
                     ALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALI
                     TNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKG
                     RIVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            complement(3402..>3476)
                     /locus_tag="WHG62_001965"
     CDS             complement(3402..>3476)
                     /locus_tag="WHG62_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ1726014.1"
                     /translation="FADRQNHINGIENFWNQAKRVLRK"
BASE COUNT          988 a          920 c          791 g          777 t
ORIGIN      
        1 aggtaacggg ttctttgacg gttcaggtat tgttcgatcg gctgccaatc aatcacccgg
       61 tccaacttca atagcgggaa gcggtcgatg tgtttggcaa tcatggcttg ggcggtttgc
      121 cggaagaagg tgctcatgag aaatccccta aatgtcttgg tgggaattta ggggattttg
      181 gggaattttg caaaggtctc tagatgagtg aaaaagaagt gcaggctgcc taaaaagaca
      241 gaaaaagtct ttccggcagc ctgcactttg gtttcatttc agtcagtaaa cccagtaaac
      301 gacggtctga aaacgcagaa cgttacgaaa aaagcagcct acacgcccat cccccgcctt
      361 ctacccgttc tgtaaatcat acagatagcg gtaatatccg ttcggcttcg ccagcaattc
      421 ctgctgtgtt cccgcttcca caatcctgcc tttatccatg gcaatgatcc ggtgtgccgt
      481 tttaacggtg gacagacggt gggcgataat cagcaccgtc cggttggcgc aaatggcctg
      541 catgttctgc ataatcgctc gttcactttc ataatccagc gcgctggtgg cttcatcaaa
      601 aatcagaatg cgcggattgg tgattaacgc gcgggcaatc gcaatacgct gccgctgtcc
      661 gcccgacaag ccggcccctt gttcgcccac cacggtgccg tagccttccg gcagctccat
      721 aataaactcg tgtgcgcccg ccagtttggc tgcttcgata atgcgttcca gcggcatacc
      781 cgtatccgtc agcgcgatat tgtcgcgtat gctgcggttg agcagcacat tctcctgcaa
      841 gaccacgccg acctgccgcc gcagccaggc aggagcggcc aaagccaaat cgttgccgtc
      901 caccaacacc cgtccctgct ccggtacata cagacgctgc accaatttgg tgagtgtgga
      961 tttgcccgac cccgaacgtc ccacaatccc cagcacttcc cccgcccgaa tccgcaggtt
     1021 caaatcctgc aaaatcagcc tgccgtccgc cttatagcgg aaatcgacat gttcgaacgt
     1081 aatctccccc cggatatcgg gcaaagccaa atgcgaagac gcattctcgg tcggcgcatt
     1141 cagaatatcc cccaaacgcg ccaccgaaat ccccacctgc tggaaatcct gccacaactg
     1201 cgccaaacgg ataacaggcg ccgccacctg tcccgagagc atattaaacg caatcagctg
     1261 ccccaccgtc agcttgccct caattaccag ccgtgcgcca atccacaacg tcgccaccgt
     1321 caccagcttc tgaatcagct gcaccccctg ctggccgacc accgccaact tcgttacccg
     1381 aaatcccgaa gccacataag ccgccaactg attgtcccaa cgctgcgtca tctgcggctc
     1441 caccgccatc gcctttaccg tacccaccgc agtgatgctt tctactaaaa acgactggtt
     1501 gtctgcattg cgcgcgaact tatcgttcag acgcgtccgc agtatcggac tgataaatgc
     1561 cgaccaaaac gcataggcag gcaacgaagc caataccacc caagtcagag tggagctgta
     1621 ataccacatc accgccagaa agataaacga aaacgccaaa tccaacaccg aagtcagcgc
     1681 ctgaccggtc aggaaattgc gaatctgctc caattcccgc acccgagcca ccgtatcacc
     1741 cactcgtctg tgctcgaaat aggataaagg cagggaaagc agatgccgga acaaacgcgc
     1801 gcccaattcc acatcaatac gtgaagtcgt atgtgcaaac agatacgtcc gcaaaccgcc
     1861 caacacaatc tcaaacagcg acaccaccaa caaagccacc gacaccacat ccaaagtaga
     1921 gaatccccga tgtaccagca ccttgtccat caccacttgg aaaaacagag gcgtaatcag
     1981 cgcaaacagc tgcaacacca ccgacaccac caatacttca aaaaacaacc ggcggtattt
     2041 gattaccgcc ggaataaacc aggtaaagtc aaactttgcc aaactgccca ataccgaagc
     2101 gcgggaagca accaatatca gtttgcccga atatctgtta gaaaattcgg caaaagacaa
     2161 taccgcagac ttattcgtag ttaaatcctg tattagatat tgggcatgct cacccccacc
     2221 gtctgtttta gccaaaataa aatggttgcc gtcatcacac cataccaatg cgggtaaagt
     2281 cgccatagcc aaacgtttga caggctggcg gactaccttt gccttcaatc ccaaagattt
     2341 ggcagctaaa agccattgcg tttcatttaa atcgctctgt gcggaagtac aaaattcatg
     2401 ctgtatatcg gcaggattgg cggcaatgcc gtggtaatgg gcgaggatga tgagggcgga
     2461 aagggcgggg agcggtgcgg atacgataga cataaataaa atatagttag attggatgtg
     2521 gataacggct ggctggaaaa ggaatatatt cagtagaaag aaatatataa ataaaacagc
     2581 agaacacatt gtaaggatgt atatgggaat tgtaaagaga aagtatggaa aagttctcgt
     2641 ttcaggaagg taaaacggct taggaatcga gttagatgag gatgcctcgc acctctcgtg
     2701 cctcctgcat accgttaagg cacagggtta aggtgcaggc tgctccgaac tctgttgcgg
     2761 tcgggtaatg ttattttttg tgtttcaggc agcctgaaat atctgtatat ttttgtttta
     2821 aatagatttt aaagattgat aactgttctt gacgattttt caagaaagga gtaaatttca
     2881 agaaaggagt aaagtgactt attatcaatg acaagcaacg cgcgaagtga caaggaaaac
     2941 tatctactta aattctaagg aggcttcgaa tatcataaac caatcagaaa catagagata
     3001 aaaattatgt acaaatataa tcctcttata caatttattg cacagttgat tatgtcttat
     3061 ggagcaagcg tagggtgggc acttgctgcc ccacgcgttt catatttcaa ggcagcctga
     3121 aaccgtgtgg gcataaatgc ctaccctaca tcccaaaaaa caagcgcagc ctgcgtgtgt
     3181 agggtgcgaa ctttcggcag gtagacacgc agttttatat tttcaagctg agggatgctt
     3241 aagaaaagta caaaacatta aaaaataagg ggctgtacta gattagccct aaatccacac
     3301 caatcccgca agatttttag ctgtcgggac ggtgtgccga agttaaatcg aaattcgcat
     3361 tatttcaaga acagcgggaa agatttgcga tcaattccgt tctatttgcg caagacgcgt
     3421 tttgcctgat tccaaaagtt ctcaatgccg tttatgtggt tctgacggtc agcaaa
//
LOCUS       DAWGBY010000164         3297 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.164, whole genome shotgun sequence.
ACCESSION   DAWGBY010000164 DAWGBY010000000
VERSION     DAWGBY010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.164"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(65..1207)
                     /locus_tag="WHG62_001966"
     CDS             complement(65..1207)
                     /locus_tag="WHG62_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ1726015.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWADLRRRAEAQVNPAFAPISGSDNDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAG
                     WQVGMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1256..1678)
                     /locus_tag="WHG62_001967"
     CDS             complement(1256..1678)
                     /locus_tag="WHG62_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726016.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1671..2480)
                     /locus_tag="WHG62_001968"
     CDS             complement(1671..2480)
                     /locus_tag="WHG62_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ1726017.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNSDQWTGEPQ
                     SREGQAWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEESGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQAQEKGADVVVWRVCDDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2562..2939)
                     /locus_tag="WHG62_001969"
     CDS             complement(2562..2939)
                     /locus_tag="WHG62_001969"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ1726018.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAVRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3139..>3297)
                     /locus_tag="WHG62_001970"
     CDS             complement(3139..>3297)
                     /locus_tag="WHG62_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ1726019.1"
                     /translation="GLIFLLSVLSVIGLYVGIRLRTKISPNFFKMLIFIVLLVLALKI
                     GHSGLIKL"
BASE COUNT          726 a          889 c          912 g          770 t
ORIGIN      
        1 tatcggccgg atattaaaaa aagccgtctg aacatttttc agacggcttt tttgtacact
       61 ttcctcaacg gttcgatccc tgcaccatat caatcaggaa caggcggcag tcgaggttgc
      121 cgttataaag cggaattttc cgcttgggcg acaggcgcat gaatttgggc atttccctgt
      181 cgccggtaaa cataccgacc tgccagccgg catagtgttt tttcaaccac gtccccaact
      241 gcggatacag tgcctgcaaa gcgcggactt cctcaaggcg cacaccgtag ggcggattgg
      301 acaccataat gccgcccacg ccgttcggac ggacggattg cgcgtcggca acgctgaagg
      361 aaacgatgtc gtccaccccg gcactgcgtg cgttggccaa tgccgtctga atgatgcggc
      421 ggtcgttgtc gctgcccgaa atcggtgcaa aagcggggtt gacctgcgct tcggcgcggc
      481 ggcgcaaatc cgcccacagc gttttatcga aattttgcag tttttcaaaa ccgaagcggc
      541 gcatcatgcc cggcgcgcgg cgggcggcaa tccaagcggc ttcgatagca atcgtgccgc
      601 tgccgcaaaa cgggtcttga aacggctgcg tgccgtcgta gcctgccgag agcagcaatc
      661 cggcggcaag gttttcgcgc agcggggctt cgccggtatc gagacggtag ccgcgtttga
      721 acagggcttc gcccgaagtg tcgatgaaga tttcgacatt gcgttcgtcc aaaaaggcgt
      781 ggatgcgaac atcgggcgcg gctttgtcca cgctcggacg tgcgtcgtaa atgtcgcgga
      841 aagcgtcgca gacggcatct ttgacggtca aaccaacaaa ttggatgctc ttaacgttgg
      901 cacgctttgc ctcgactttg actttgaacg tctgctgtaa agtaaaccaa ttaaaccagt
      961 tgatattttt ggcgagtttg tagatgtcgc gctcattgcg gtatgtccct ttggtcaggc
     1021 gcagcaggat acggctggca gtacgcgaat gcaggttggc ggcgtaaacc tgttccaatc
     1081 cgccccggca ggaaacgccg ccgtcaaaca cttgtacatc ggtacagccg aggctttcga
     1141 gttcttgaga taaaacggtc tccaagccgc gcgggcaggt ggcgaaaagt gtatataaag
     1201 tattcataac gtgtcctttc cggacggatg ttccggcaat ggcggattga aaggtttatt
     1261 cggcggtaaa tgccgtctga aatgtccgac tgccgattgt aatgtccgcc gtaaaatcgc
     1321 gcctgccttc gacacagatg ggcaggcgga tgcgtactgc ctgccaagtc cccgacggtt
     1381 gccgctcgaa catatagcgg ttgaaaccca tatccatatt tttcatactg aagctgatgc
     1441 tgacctgctc cgtgccggcg ggcgcgtgtt cgatataaat atcaaacggt tttttggttg
     1501 aaacggcggc ggcgcggacg cggcttccgt ccggcagcgt gcaaccctcg gtcaaatcgc
     1561 attgcgccgc cacagcttgc ggctgctgcg cctgccacca ttgcaacaaa acgagcttga
     1621 cggcggcaaa ggcaatcagc agcagtgcgg caagcagtaa tttacggttt ttattcatga
     1681 ttcttcccta ttgtttcatc ccttaccacc acgtgcgccc ccaatccgag ccatagtttt
     1741 ccataacgtg caaccgtctg tccgtttgct gcaagtacga gcggcacaga tacgccctgc
     1801 cgcagggctt ctgccgcctc ttgtgcctga acatcatcgc acacgcgcca gacgaccaca
     1861 tccgcgccct tttcctgcgc ctgccgccat tgttcgcggg tctgcaccat catccacacg
     1921 ctgtcggcgt gttcgggtct gtcctgccat tgcgccgcct ccatcaaaac gttcgcaccg
     1981 ctttcctctg ccgaacccaa aggcaggacg cggtacgcgc ccatactgtt ctccccgtgc
     2041 aaacccgttt tcaggctgcc gtacaaacgg cgcgggacgg acagcgaacg caaaagcgcg
     2101 ccgttggcag gcagcatggg ggcaacggta aaatcacccg ccttctgcca cgaccatgcc
     2161 tgtccttcgc gcgattgcgg ttcgcccgtc cattggtcgg agttgaccca taggaatttc
     2221 aggcagacgc gggcgtgttc gtaggaatgg attttggtca gccaaggcgt ggcggcgagg
     2281 atgcggatgc cgagttcttc ttcaaactcg cgttgcaagg cttggaagtc ggtttcgccc
     2341 gcttcgacct tgccgccggc aaattcccaa tatccggcat agggtttgcc ttcggggcgc
     2401 gagctgagca ggtagttgcc gtctgaatcg agcaggatgc cggcaacgac gcggataagg
     2461 ggtcgggtgt cttgaatcat ggcgggtacg cggttggtcg gtcggagtgc aaatgaggga
     2521 cgggcaatgc cgtcaacggg tttgccgcat ttcagacggc attatttttc ggcaacgaca
     2581 aacgccaata cggtgtcttc ttcgtcgctc atgctgaggc tgacgcggct gatgccttgt
     2641 tcctccagcc atttggacag ggcggggccg tagaaaaatt cgggcttgcc caatgcgtca
     2701 tgcccgatgc cgatgttgcg gaaggaaacc gcgccgcgta tgcccgtgcc gacggctttg
     2761 gcaaaggctt ctttggcggc aaagcgtttg gcaaggtagt tgacgggttt gcccgcctga
     2821 ggaaattcaa gcagctcttc cggagtgagg atacgcacgg caaacgcctg tccgaatttt
     2881 ttgtttaagc ggatgatgcg cttgagggaa acgatgtctg taccgatgcc gtaaatcata
     2941 tttgcgctcc ttcgcccttg gttgcgggta gtgatgaatg tgatgatgaa tgccgtcaat
     3001 ttcttggggc gttaaaatgg cgtgaatatc cacttttggg gttttgtcgg taacaatttt
     3061 cactgtaacc ttttgcattt gaaattctaa aacatcgtgc caattattta ataaggagtt
     3121 aaggcattta ataatgaatt aaagtttgat taaacccgaa tgcccgattt tcagagccaa
     3181 taccaataaa acaataaaaa ttaacatttt aaaaaaattt gggctaatct tagtccttaa
     3241 ccgaattcca acatacaatc caataacaga caatacggac agtaaaaata ttaaacc
//
LOCUS       DAWGBY010000165         3278 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.165, whole genome shotgun sequence.
ACCESSION   DAWGBY010000165 DAWGBY010000000
VERSION     DAWGBY010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.165"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            188..3212
                     /locus_tag="WHG62_001971"
                     /pseudo
     CDS             188..3212
                     /locus_tag="WHG62_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
BASE COUNT          945 a          809 c          865 g          659 t
ORIGIN      
        1 aaacaacggc aagttgcaac aacagtaaaa caacggcagg cgaggcggtg ggctgaagcc
       61 caccctacga tggacggcaa ccgacccgca ttccaccgaa gccaacctaa agcagcctgc
      121 acattttcag gcagcccaat ccgaacatca aaccgtttaa aacccgaccc tgcaaaggac
      181 gacccatatg aaccttgaaa ccaaacccat cgccgaaacg ccgaatttca tcgtgctcga
      241 ccaatatgaa aaaatcgaac agtcgggcag ctaccaatcg gaaaaccggt tggaagcgga
      301 gttaatcgcc gatttgcaga atcagggtta cgaataccgc aaggatttga acagccaaag
      361 caggctgctg gaaaacctgc gcgcgcagtt gcagcggctg aacgatgtgg cgttttcaga
      421 cggcgaatgg gcgcggtttt tgacggaata tctggacagg ccgtctgaaa aacatttatc
      481 tgctggacaa gaaaaacctt gcccgcaacc atgtgcagct tatcaaccag tttgagcaga
      541 cgggcacgca tgcaaaccgc tatgacgtta ccgtgttggt aaacggtctg ccgctggtgc
      601 agattgaatt gaaaaagcgc ggtgtggcgg tgcgtgaagc attcaatcag gtgcaccgtt
      661 acagcaaaga gagcttcaac agcgaaaatt cgctgttcaa attcctgcaa atcttcgtga
      721 tttccaacgg cacggacacg cgctatttcg ccaacaccac caagcgcgac aaaaacagct
      781 tcgatttcac gatgaattgg gcgcggtcgg acaatcatcc gattaaggat ttgaaagact
      841 ttaccgccac gttcctgcag aaaagcgtat tgctgggcgt tttgctgcat tacagcgtgt
      901 tcgatgcgaa tgatacgctg ctgattatgc ggccgtacca gattgccgcc gccgaacgta
      961 ttttgtggaa aatcaacagt tcggcgcagg cgaagaattg gagcgggccg gaaagcggcg
     1021 gctatgtttg gcataccacg ggcagcggca aaacgctgac cagctttaag gcggcgcgtc
     1081 tggcgacgga atcggcgttt atcgacaagg ttttcttcgt ggtggacagg aaggatttgg
     1141 actatcagac gatgaaggaa taccaacgtt tttcgcccga cagcgtgaat ggttcggaaa
     1201 gcacggcggg cttgaaacgc aatttggaaa aagacgacaa caaaatcatc gttaccacca
     1261 tccaaaagct gaacaacctg atgaagagtg aagataatct gccggtttac catcagcagg
     1321 ttgtatttat tttcgacgaa tgccaccgct cgcaattcgg cgaagcgcaa aaaaacctga
     1381 aaaagaaatt taagaaattc tgccagttcg gttttaccgg tacgccgatt tttcccgaaa
     1441 acgctttggg cgcggaaacc acggcgggcg tgttcgggcg ggagctgcat tcttatgtga
     1501 ttaccgatgc catccgcgat gaaaaagtat tgaaattcaa agtggattac aacgacgtgc
     1561 gcccgcagtt caaagccgtg gaagcggaac aggacgagaa gaaactgagt gccgccgaaa
     1621 accgccaagc cctgctgcac cccgaacgca tccgcgaaat cacgcaatat atcctgaatc
     1681 agttcaggca gaaaacgcac cgcctgaacg cgggcggcaa aggctttaac gccatgtttg
     1741 ccgtcagcag cgtggatgcg gcgaagtgct attacgaagc gttcaaaacg caacaggcag
     1801 gcagcctgaa cccgttgaaa acagccacta ttttttcctt tgctgccaac gaagagcaga
     1861 acgccgtcgg tgaaattgtc gatgagactt ttgaaccgga agcgatggac ggcagcgcga
     1921 aagaattttt gcaggctgcc atcaacgatt acaacgcctg ttttaaaacc aatttcggca
     1981 cggacagcaa agcctttcaa aactactacc gcgatttggc aaaacgggtg aaaaatcagg
     2041 aagtggattt gctgattgtg gtcggcatgt ttttgacggg ttttgacgcg ccgacgctga
     2101 acacgctgtt cgtcgataaa aacctgcgct atcacggcct gatgcaggcg ttttcgcgca
     2161 ccaaccgcat ttacgatgcc accaaaacct tcggcaatat tgtctgcttc cgcgatttgg
     2221 agcaggcaac cattgatgcg attaccctgt tcggcgacaa acacaccaaa aacgtggtgc
     2281 tggaaaaaag ctacgaagaa tacatgaacg gctataccga cagccagacc ggcgaagcgc
     2341 ggcgcggtta tttggatgtg gcaaaagagt tgcgtgaacg tttccccgaa cccgacgaaa
     2401 tcgaaacgga aaaagacaaa aaagattttg ccaaactctt cggcgaatac ctgcgggcgg
     2461 aaaacgtatt gcagaactac gatgaatttg ccgcgctgcg cgagttgcag agtgtggacg
     2521 cggcggacga agatgcgatg aaggcgtttc aagaaaaata ctacttgagc gatgaagacg
     2581 tgcaggaaat gcggcaagtg ccgatgccgt ctgaaagggc ggtgcaggac taccgttccg
     2641 cctacaacga catccgcgat tggttgcgcc gccaaaaagc aggcgaacag aaagaacagt
     2701 caaaaatcga ttgggacgat gtggtttttg aggtggattt gctcaaatca caggaaatca
     2761 atctggatta catcctgcaa ctggttttcg aacaccacaa aaaaatcaaa ggcaaagcgg
     2821 agctggtgga agaaatccgc cgcatcatcc gcgccagcat cggccaccgc gccaaagagg
     2881 gtctgattgt ggatttcatc aacgatacgg atttggacaa agtacccgac gttcccgcca
     2941 tactggaaac cttctacacc tacgcgcaag aggtgatgcg gcacgaagcg gcaggattga
     3001 ttgccgccga aggcctgaac gaaaccgccg ccaaacgcta tttaatcagc tctctcaaac
     3061 gcggctatgc cagcgaaaac ggcacggaac tgaccgaaac cctgccgaaa atgagtccga
     3121 ttaacccgca atatctgacg aagaaacaaa gtgtttttca aaagattgcg gcgtttgtgg
     3181 agaagtttgc cggaataggg accgatattt gacaaaatgc cgtctgaacc tttcagacgg
     3241 catttttgat ttcatgcgag ggcggttttt atagtgga
//
LOCUS       DAWGBY010000166         3246 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.166, whole genome shotgun sequence.
ACCESSION   DAWGBY010000166 DAWGBY010000000
VERSION     DAWGBY010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.166"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(367..3135)
                     /locus_tag="WHG62_001972"
     CDS             complement(367..3135)
                     /locus_tag="WHG62_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ1726020.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQQYFVQTGGLKFNSDSGKWER
                     DLQRQFWKTKWYKQYEDPQELQKYIEGQDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYKKHCNRSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGNIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEEVTCNDDNTLCNGKYGGTSKSVLTNFARGRTF
                     LITMSYKF"
BASE COUNT          745 a          791 c          807 g          903 t
ORIGIN      
        1 ctagattccc gcctgcgcgg gaatgacgaa cctatccgta tggaaacctg caccgcgtca
       61 ttcccacgaa agtgggaatc cggaaagcta aagccacagg aatttatcgg aaatggctga
      121 aacttaaaaa aactgattcc cgcctgcgcg ggaatgacga ctcataaatt acccgaaaca
      181 accaaaaata accgaaatca aaaaccggct tccctgcgtg ggaatgaaat ggatttttct
      241 ttgagttgcc gatgcgataa aacggattgg cataggcttg cggcaggatg atgcgtttgg
      301 ggaaacaaat gccgtctgaa gggctttcag acggcattgc ggttttccac aaaacgcggg
      361 ctgcctttaa aacttgtagc tcatcgttat caaaaaggtg cgtccgcgtg caaaattggt
      421 caatacgctt ttgcttgtgc cgccgtattt gccgttgcat aacgtgttat catcattaca
      481 cgttacttct tcgtccttgt ctttcgggtc gaacgaactg taataacgct gcgttgccgc
      541 atcattgccc gcatcgagcg gatcgatata acgcctgtcg aacagatttt tgacttcggc
      601 gcggaaaata aggtttttct tcggctcgta agcggcgtaa aaatcaaaaa tcaaaggctg
      661 gcgggcaagg gtttcggttt gtttgatgga acgcttgccc agttgccgga cattgctggt
      721 atttcccccg ttggtgccgt cgatatagcg ttcttctgcc gtcgcgcgga tgctcttgcc
      781 gaaatagcgc atcgcgccgc ccaaagtcag tttgttgccc aaccagcgcg taccgacttc
      841 caaacgtccg taatctcgcg gcagggcgga aaccctgctc aacccataac cttgtttgag
      901 ttggtcttct ttggacgcat tgttgggcga ttcgctcgca tcgctgaagt tggtcggttg
      961 cgtgcttttt tgataggcgt aagaaaggtt ggtgaaaaaa cgcccataat cgtaattcag
     1021 ctccaactca aaaccgtgtt tgtgcacttt gtctttgaaa ttgcggtgtt ggatggtgta
     1081 ggcaagcccg gtgctgctga cccagctcgg aatattcccg ttcaaatccc accatttccc
     1141 gtaaacgttg tggatgtagt tgtcgatgcg gctgcggtag ccgaccagtt ttaatcctaa
     1201 tgtatcatct tgttttaaca gtcctttttt ataggtattg aagccaaatt gccaagtgtt
     1261 tgcgcgctct ggttttaagg cggtgtgaac gccggagtcg ccgatttggg aaaaatacat
     1321 ttcttggatg ttgggcatac ggtgtgtgcg cgaatagctg gcgaacggca tgaaataatc
     1381 gccgaagtcc gcactaatgc tgaccgaatg gttgttggcg cgctttttgc cgtatttttt
     1441 caatacgggt tcataaatcc cgcagctccg gttgcaatgt ttcttgtatg tcggcgagtt
     1501 ttctccgaat gcccgcttaa attcgtcatc cgagccgtaa tagcccgtat attcgccgcc
     1561 gaaacggtag ccgacggtat tggtgctgta gtttaagcgg taaatgtctt ttttgagcgc
     1621 ggcatcgaag tagaacgtgt tgaaatattg gctgccggcc ggttggacga tggttgattt
     1681 ttggggcagc agccctttat cgcccttaaa ccgccccaaa taggaataaa gcccgttgtc
     1741 ctgatccgga ccgtcgaaaa acagccccaa ttcttcagga aagcggtttt tgccgtattc
     1801 gttgtggaaa taattgaagc ccaaagtggt ttgcaactcg gtttcgcggg gcagccggaa
     1861 ggtggcggtg ttgttgaggt cgaggatttt cgcgttgttg taggtttcaa aatcttttaa
     1921 aagcccccag cctgtaaact tcgacccttt cggatatttc tgcctgcccg aattgtaggc
     1981 tgcggtcaga ttgaggttgg catatgagtt taaagataaa ccgtaattga attgataatt
     2041 gcggttgatg attttgcggc tgccgatttt ggtgtttaaa tcgcgaaatt gcgccgtgta
     2101 tttattgaat acgccgtcgt attccaattt aaacagattg cctgccgact gctgcttcag
     2161 gctggacgga tcgatggggg taatgtcgta ttgcggcgcc aggttttccc gccagctttt
     2221 atcttgacct tcgatgtatt tttgcagttc ttgggggtct tcgtattgtt tataccactt
     2281 ggttttccag aattgccttt gcaaatcgcg ttcccacttt ccgctgtcgg aattgaattt
     2341 caacccgcct gtttgtacaa aatattgctg cttgcgccgt tctagatatt ccgcgccaaa
     2401 atttccgatg tgctgcccgc cgccgcccac gcggtaattt tgcgccacgc tgcgcctgct
     2461 gtgcccgtaa agcacaccga cagatgctcc gctttccagc catttgcgcg cacctatcgc
     2521 cgccatcgca ttacctttgg ttgaattggt gccggtcaga ccttttagca gcaggccgta
     2581 ggtattattg ccctgaacga cgtcatccac gcctaaagtc cgcagattcg ccgaaccggc
     2641 aaggctgttg atgcctgccg agccgctgaa gctgcctttg acgacatcca gtccggcaat
     2701 aaaattgctg tcgacagatg caccgaattg agatgaaccg cctgccctgc ccgcatcggt
     2761 agaagtcgaa taaaaggtct gcgtgatgcc gtccaccatc gtattgaccc gcccgaaccc
     2821 gctgtcgccg cgaatattca aagacacaat gcccgagctt ttatcttgct gtgtaaacgc
     2881 accgggtatg ctgcgtacga tgttgtcgag gttttcgctg gatttgaata tatcctgacg
     2941 ggtcgatacg gcacgcgcat cggtaaacac ttttttgtct ttcggtacgc gcttcgcctt
     3001 gacgtgcaca tcttccaaaa cctgtatctg cgcctcgctg cccgcgcgcc ctgcatcttc
     3061 ggcataacta tgatgatata gcataacacc cataaggtaa aaacaaatcg gcttcaaccg
     3121 gaaagaagat ctcatatttt cctcaacaat aaacagtcag acaattagga aatatactag
     3181 catttttttc aggcggcata aacattaaaa aagtgtaaat ttgatatacc gtctgaagat
     3241 ttcaat
//
LOCUS       DAWGBY010000167         3136 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.167, whole genome shotgun sequence.
ACCESSION   DAWGBY010000167 DAWGBY010000000
VERSION     DAWGBY010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.167"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            273..896
                     /locus_tag="WHG62_001973"
     CDS             273..896
                     /locus_tag="WHG62_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ1726021.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYQNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1007..2389
                     /locus_tag="WHG62_001974"
     CDS             1007..2389
                     /locus_tag="WHG62_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1726022.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQDGLQCALSQLEGVEDIGFSFDRQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2393..2917
                     /locus_tag="WHG62_001975"
     CDS             2393..2917
                     /locus_tag="WHG62_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ1726023.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          643 a          846 c          937 g          710 t
ORIGIN      
        1 cgcctgctgc cgcccgaaaa gcgtgatgcg ctgatggtgc tgctgcacaa tccggacgac
       61 agatagccgg tgaaaacggg aaatgcccgg gtggtgttgt ctgtgcctgt ttggacaagc
      121 gttcttgaga gcggtaaaat cgggatttgc ctgaaaaggg cagggcgata tgccgcgctt
      181 ggattttgcg cgcggttttt cgcattgaaa gcaattatgt ctgtttgaat atttaatgcc
      241 gtctgaaacg tccggacgcg cccccgttcc ctatgaaaaa accgaccgat accctacccg
      301 ttaatctgca acgccgccgc ctgttgtgtg ccgccggtgc gttgttgctc agtcctctgg
      361 cgcacgccgg cgcgcaacgt gaggaaacgc ttgccgacga tgtggcttcc gtgatgagga
      421 gttctgtcgg cagcgtcaat ccgccgaggc tggtgtttga caatccgaaa gagggcgaac
      481 gttggttgtc tgccatgtcg gcacgtttgg caaggttcgt ccccgaggag gaggagcggc
      541 gcaggctgct ggtcaatatc cagtacgaaa gcagccgggc cggtttggat acgcagattg
      601 tgttggggct gattgaggtg gaaagcgcgt tccgccagta tgcaatcagc ggtgtcggcg
      661 cgcgcggcct gatgcaggtt atgccgtttt ggaaaaacta catcggcaaa ccggcgcaca
      721 acctgttcga catccgcacc aatctgcgtt acggctgtac catcctgcgc cattaccaga
      781 atcttgaaaa aggcaacatc gtccgcgcgc ttgcccgctt taacggcagc ttgggcagca
      841 ataaatatcc gaacgccgtt ttgggcgcgt ggcgcaaccg ctggcagtgg cgttgatttt
      901 gaacccgcgc cgcaaccgaa atacggcgaa tcctgtataa tccgaaaatc tgttcactgg
      961 aagttcagac ggcattgcaa ctgttgatgc cgtctgaaaa aatatgatgg caagagacaa
     1021 ccgcatccaa atgtttccgc acgaatggcg cgccagtacg acgctttccg gcgtgtacgc
     1081 gctgcgtatg ctgggtatgt tcctcgtgct gcccgtattg gcggtgtatg ccgcctcgct
     1141 gcccggcgcg gaaggcaaca aaacgctggt cgggctggca atgggcattt acgggctgac
     1201 acaggctctg ctgcaactgc ctttgggcat cgcttccgac aagttcgggc gcaagaaaac
     1261 catttatgtc gggctgattg tgtttgcagc gggcagcttc cttgccgccg ccgccgatac
     1321 gctgcccatg ctggtcgccg cacgcgccat acagggtgcg ggagcggtca gtgcggcggt
     1381 taccgcgctg ctggcggatt tgacgcgcga cggcgtacgt acccgcgcga tggcgatgat
     1441 cggtttgagt atcggtctga cgttttcggt cagcctcgtc gttgcccctg tgattgccga
     1501 cgcggtgggc gtacgcggct tgtttctgct gaccggtatt ttgaccgttg ccagtatcgg
     1561 cgtggtggcg tggatgactc ccgacccgga ggtttccaag ctgcacgaag atacgcaggc
     1621 gcagccttcg cgcataggcg aagttttgaa aaaccgtagg ctgctgacgc tcgatttcgg
     1681 cattttcgcc ctgcacgccg cgcaaatggc attgtttacc gcgctgcctt tcgcgatgac
     1741 ccagctcggt ttggaaaaaa tccagcactg gaaagtctat ctgccctcga ccattacggg
     1801 attggtggta atggttccgc tgattatcgt cggcgagacg cgcaacaagc ttaagcaggt
     1861 ttttgttttg ggtatcgtct gtattgcggc ggcgcagctc ggtttgctgt ccggtatgcg
     1921 ctcggtaggc ttgattaccg cttatttggt tgtttacttt atcggtttta atgtgttgga
     1981 agcgagcctg ccgtctatgg tttccaaaat cgcgccgtcc gacctgaagg gtacggcgat
     2041 gggcgtgtac aacacgatgc agtcgctcgg actgtttgcc ggcggcgcgg caggcggttt
     2101 gctgtttcaa aaatacggct tttccggcgt gtttgccttt tgcagtatat tgatgctgct
     2161 gtggctggta attgccgttt tatcgcccgc gcccaagccc gtcaaaaacc tcagttaccc
     2221 tgtcggcggc gtgtggcagg gcaatcagga cggcttacaa tgcgccttgt cgcaactcga
     2281 aggcgtggaa gacatcggtt tcagtttcga caggcagacc gtctatctca aagtgttgca
     2341 gaagggtttc gatcaggctg ccgctgaaaa aatcatcaca ggagtttaaa aaatgtcatt
     2401 gaacaaagtc atccttatcg gccgtctcgg acgagatcct gaagtacgct atatgcccaa
     2461 cggcgaagcc gtctgcaatt tcagcgtcgc caccagcgaa acttggaacg accgcaacgg
     2521 tcagcgcgta gagcgcaccg agtggcacaa catcacgatg taccgcaaac tggcggaaat
     2581 tgccgggcaa tacctcaaaa aaggcgggct ggtttatctg gaaggcagaa tccaaagccg
     2641 caaataccaa ggcaaagacg gcatcgaacg cactgcttac gatattgtcg ccaacgaaat
     2701 gaaaatgttg ggcgggcgca atgaaaacag cggcggtgcg ccttacgagg aaggttacgg
     2761 tcagagtcag gaggcttacc aacgccccgc gcagcaaagc cggcagcccg cctccgacgc
     2821 gccgtcccat ccccaagaag caccagccgc gccgcgccgc caacccgtgc ctgccgccgc
     2881 cccggtcgag gacattgacg acgatatccc gttctgaatt ttacggccgg acatcctcgc
     2941 ggagggaaat cataaaggac ggagaaacct taaaccttac ggggcagggt ttctcttttt
     3001 tgcatttggg ccggcttgtt gccgcccttt gcgttgggcg gaacgttgcg attgcgccgt
     3061 tcgggcgttt tgaggcagtg atgcctgccg cacgtccccg ctgttttcag acggtatagt
     3121 ggattaacaa aaatca
//
LOCUS       DAWGBY010000168         3045 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.168, whole genome shotgun sequence.
ACCESSION   DAWGBY010000168 DAWGBY010000000
VERSION     DAWGBY010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.168"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            32..1249
                     /locus_tag="WHG62_001976"
     CDS             32..1249
                     /locus_tag="WHG62_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1726024.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTAIAIIGLANIAGCIF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            complement(1452..1592)
                     /locus_tag="WHG62_001977"
     CDS             complement(1452..1592)
                     /locus_tag="WHG62_001977"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726025.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGEQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1605..2735
                     /locus_tag="WHG62_001978"
     CDS             1605..2735
                     /locus_tag="WHG62_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ1726026.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYHIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRLLKEKGIDE
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGGDLERLIARDIIRFPGFVNNVSEVIKAH
                     HIFVLPSYYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAE
                     KMIYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          730 a          907 c          704 g          704 t
ORIGIN      
        1 ccgcaaactt aaccgactca caatacacat tatgacgcac accgcatcga aaacacccaa
       61 attttggctg accatcaccg ccgccgcatt catcctgctg attaccatcg gcatgaggat
      121 gacgctcgga ctgttcgtcc aacccgtcgt caacaccacc gaattgagca ttgcccaatt
      181 cagcctcatc atcgccgttt tccaactgat gtggggcata tcgcaaccat tgtccggcgc
      241 gcttgccgac cgtttcggcg cgttcagggt attaagcggc ggcgccgtcc tgctcgtctg
      301 cgcctgcctg attgccccca acatcccgac ttattggggg ctgatgattg ccgtcgggct
      361 gctgctcgca ttcggcacag gctcaggcgg tttctccatc attatggggc aggtcgccgc
      421 ccaagtcccc gcacacaaac gcggcttggc atccggactg gtcaacgccg gcggttcggc
      481 aggacaattc ctgttcgcac cgctggttca aggactcgtc gtcctgcccg aagtcggctg
      541 gacgggcaca ttttacgttt ggggcgcaat cgccctgctg attctgcccg tctcatggtg
      601 gcttgccggc ggcaacaacg ccgcccacac ccaacacgcc caagccacac acggacaaag
      661 cctcggagaa gcagtcaaaa ccgccttcaa aaccccaagc tacatcctgc tgcacctaag
      721 cttttttgcc tgcggcttcc acatcgcctt tctcgtaacc cacctaccca cggaagtcgc
      781 cctgtgcgga ctgcccgcca ccgtcgcatc cacagccatc gccatcatcg gactggcaaa
      841 catcgccggc tgcatttttt ccggctggtg cacaagccgc gttcggggca aatacgtcct
      901 gttcggactg tacgcctcgc gcgccgcgat gatactcatc tacatttttt cgcccaagac
      961 cgacctcaac ttctacattt tcgccgccgc actcggattt acctggctcg ccaccgtcac
     1021 gccgaccgcc tccattaccg gcaaactctt cggcacacgc tacctcgcca ccctgttcgg
     1081 actgacgatg ctcagccacc aaatcggcgg attcctcggc tcgtacatcg gcggcatcgt
     1141 gattacacaa ttcggcgact acggctggat gtggtacgcc gacgcactgc tggcgggaac
     1201 cgccgccctc ctcaacctcc ccatccgcga accccgaacc gccgcatgaa agaatgccgt
     1261 ctgaaaaccc tcagacggca ttttccaaac accccgcccg tttccggact gcacgacacg
     1321 caaatcagcc ttatcaaacc gcaaacaacc gccgcgatta aaccgccatt caaataagtc
     1381 cgttttccct tcgggtgtaa aatcatcaca aaacgcgata ctgtatatcg ccgggcgtta
     1441 tgcagcggat ttcaggataa aatgccgtct gaagccgccc ctgcccgggc gggcgaagcg
     1501 tcggatgcgg tgcgcttggc aaaggtttgc tcgccgcgcc ccgtatccgg catttcatca
     1561 atgcagaccg catttccaat cctataattc aaggtgtccg ccttatgaaa atcgttttta
     1621 tcacaacagt cgcatccagc atttacggtt tccgcgcccc cgtcattaaa aaattaatcg
     1681 gcaaaaacca tcaggtgtat gcctttgtat cggagttttc cgataatgaa ttggatatta
     1741 tcagggaaat gggggttaca cccgttacct accgttcaaa ccgcagcggg ctgaacccgt
     1801 tttccgatat aaaatccacc ttcctcatct ttaaagaact caaaaaaata tcgccggatt
     1861 tggttttccc ttatttcgca aaacccgtga ttttcggcac ttttgccgca aaactggcag
     1921 gcgtgcccag aatcgtcggg atgctggaag gtttgggatt cgcatttacc ccgcagccgg
     1981 aaggcatacc gttaaaaaca aaaatcataa aggggatttt gattgccttg taccacattg
     2041 ccctgccgat gttggaaagc ctgattgtat taaaccccga cgacaaagac gaactgacgg
     2101 acaaatacgg catcaaaata aaaaacatcc atattttggg cggaatcggt ctggatttgc
     2161 ggcaatatcc ttattccgag gcggatattc ccgatgaaaa agaacccgta aaatttctct
     2221 ttatcggcag attgttgaaa gaaaaaggga ttgatgagtt tattcgggcg gcggaacagg
     2281 ttaaggacaa ataccccgat acggttttta ccgctttggg cgcaatcgac aaatcacgcg
     2341 gggggggggg cgatttggaa cgccttatcg cccgcgatat tatccgtttc cccggttttg
     2401 tgaacaatgt ttccgaagtg ataaaggcgc atcatatatt cgtattgccg tcttattata
     2461 gggaaggcgt tccccgaagc actcaggagg caatggccgt cggcagggca gtgattacga
     2521 cggatgtccc cggatgcagg gaaacggtcg ccgacaaggt caacggcttc ctgatcgagc
     2581 cttggaatcc ccgcatctta gccgaaaaaa tgatttattt tatcgaaaac agggaagccg
     2641 tccgcctgat ggggaatgca agttatgcga ttgccaaaga taaattcgat gccgaaaaag
     2701 tcgatttgaa attgctcgat attttgaagg cgtaaacaag gctgcccgct tttgagtttc
     2761 ggtcatttct gataaacccc cgtcattccc gccacacccc cgtcattccc tcgaaagcgg
     2821 gaattcaggt tcgtttagtt tcggtcattt ccgataaatt cttgcaactt tgcgtttcta
     2881 gattcccact ttcgtgggaa tgacggcgga gggttgctgt tttcctgaca aattcccgcc
     2941 atctaaaatc tcgttatcca tacaagaacc gaaaatcttg ccattctcac aaaaacagaa
     3001 attcaaaaac agaaatccca aaccctcggc attcccgcca aaccc
//
LOCUS       DAWGBY010000169         3035 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.169, whole genome shotgun sequence.
ACCESSION   DAWGBY010000169 DAWGBY010000000
VERSION     DAWGBY010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.169"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..791)
                     /locus_tag="WHG62_001979"
     CDS             complement(<1..791)
                     /locus_tag="WHG62_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ1726027.1"
                     /translation="MYSNNAITNNRNNITLGAYRDAIISIFSDENVVRAIGTINSMYE
                     EYLTRSHKIDQKEFLREGERLSAKAREFQRTAEEAQKSLKEGIGRAASKFRGNSKEAF
                     VARKVQSDLQKALNASNYNKQQYARRAATALENASKSKVMAANLGKFTYGATVAMGTL
                     SMGSAWWKALDGEGNWSDVGLSSASFLGGLMGVQWGAALGVGAFGLLTGGAGWLVVGA
                     ILGGGAGAWWGSLGAEKAWRWFEDFLNLNRSDKYHVYDPLALDLDG"
     gene            complement(1348..1797)
                     /locus_tag="WHG62_001980"
     CDS             complement(1348..1797)
                     /locus_tag="WHG62_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726028.1"
                     /translation="MQPGSKNDEKNKITLNEFNNAIVTIFSDENVVRAIGTINTMHGE
                     YLTRSHKIDQQKFLSDGERLSSKAKDFQHSAEKTQRALKEGIGRAASKFHANSKEAFV
                     ARKMQSDLQKKLNASNYNKQQYARQAVTALENASKAENKGNIAFYLN"
     gene            complement(1847..2353)
                     /locus_tag="WHG62_001981"
     CDS             complement(1847..2353)
                     /locus_tag="WHG62_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726029.1"
                     /translation="MDFFDFFAQGKYKKIATEQGLDRKYFIFHYIVCNLSAISSFCLM
                     KVVHSYTILCLLIMIIGIAFGFILRNRVLSIVKNKQKFLSDMFPLEMPFFSRVYKIPI
                     LARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFICYWFGLCYPANTYYVF
                     LSRDYKRI"
BASE COUNT         1056 a          613 c          397 g          969 t
ORIGIN      
        1 ccgtccaaat ctagggcgag ggggtcgtaa acgtggtatt tgtcgctgcg gttaagattt
       61 aagaaatcct caaaccatct ccaagctttt tcagctccta atgatcccca ccaagctcct
      121 gcgccacctc caagtatagc tccaactact agccaacctg cgccaccagt aagtaaacca
      181 aaagccccaa cacccaaagc cgcaccccat tggacgccca ttagcccacc caaaaaagaa
      241 gctgatgaga gaccaacatc actccaattt ccttctccat ccaaggcttt ccaccaagca
      301 cttcccatac tcaaagttcc catggcaaca gttgccccat aagtaaactt acccaaattc
      361 gctgccataa cttttgattt tgaagcattc tctaacgctg ttgccgcacg tcttgcatat
      421 tgctgcttgt tatagttgct agcattcaat gctttttgca aatcactttg tacttttctt
      481 gcaacaaatg cctcctttga attaccacga aatttactag cagctcttcc aattccttct
      541 tttaagcttt tttgtgcctc ttctgctgtg cgttggaatt ctcttgcctt agcagacaga
      601 cgctcaccct cccttaaaaa ttctttttga tctatcttgt gcgaacgggt caaatattct
      661 tcgtacattg agttaatcgt accaatcgcc ctaaccacat tttcatcaga aaatatggaa
      721 ataatagcat ccctatacgc acctagtgta atattgtttc tattattagt tatagcatta
      781 ttcgaataca taatagcacc tccaaattta gaactgaata cgtttatatt ctctgtgtaa
      841 taatatcaaa taattaatta atggataagt aagtccgaaa aaataacaac taaaataagc
      901 aatatactga ttctctcctt tattaattag atatattgaa aaacaaataa aaaataaaca
      961 gaaaacattc atgtgaaaaa gccacctcat attcttattt ataagtttaa aataactagg
     1021 cattgtatat ttaaaaatcg gcacatccaa cggaaacaaa ccacataaaa atttttcttt
     1081 attctttatt aaagacatag ttttattttt taaaattagt ccaaataata tactaacaat
     1141 tactattaaa acaataagca cagcgtaatt ttttataaaa ttcattaaaa taataacgaa
     1201 aatactaaat agattacata ctataaattg aaatataaaa tattcagtat ttaatccatt
     1261 ttcaaccgcg agttttttaa aatatccttg ctcgaaaaaa ttaaaaaaat ccattaatac
     1321 tttcctctca agaaaactaa ttttagttta gttaagataa aatgcaatat tacctttatt
     1381 ttctgctttt gaagcatttt ccaaagctgt gactgcttgt cttgcatatt gttgcttgtt
     1441 atagttacta gcatttaact tcttttgcaa atcactttgc atttttcttg caacaaatgc
     1501 ctccttcgaa ttggcatgaa atttactagc agcccttcca atcccttctt ttaaagccct
     1561 ttgagttttt tctgctgagt gctgaaaatc tttcgcttta ctagacaacc gctcaccatc
     1621 actcaaaaat ttttgttgat ctattttatg cgaacgagtt aaatactccc catgcattgt
     1681 gttaattgta ccgattgccc taaccacatt ttcatcagag aaaatagtta caatggcatt
     1741 attgaattca tttagtgtaa tcttattttt ttcatcattc ttagaaccgg gttgcatgac
     1801 aacaccttcc atcaactaaa atattatatt attaagagac tacaacttag atacgtttat
     1861 aatctctgga taaaaaaacg taataagtgt ttgctggata acaaagtcca aaccaatagc
     1921 agataaaata aggcatccac cccctttctt cattaaggat aagagatatc gagaaacaaa
     1981 tcataactaa acagaaaaaa ttttggagat aaagccattt cattccccta ttcaagaatc
     2041 tggccaagat aggtattttg tatactctag aaaagaaagg catttccaag ggaaacatat
     2101 cagataaaaa cttttgttta ttttttacta tagatagaac cctatttctc aagataaatc
     2161 caaatgcaat gccaattatc attattaata aacaaaggat agtataacta tggacaacct
     2221 tcattaaaca aaaagaagaa atggcagata aattacatac gatatagtgg aatataaaat
     2281 atttacggtc taaaccttgt tcagttgcaa tttttttata cttaccttgc gcaaaaaaat
     2341 caaagaaatc cattaaacta tctttcacat tagaaattta aaagctaaat aatacgacaa
     2401 acaatgtgaa gtactattca tggtttattt aaaaaataat actattctga acattattta
     2461 gatacagaaa ttaacaaatt ggaactaaac aagcttttaa atactttaat tttattggaa
     2521 agctataaaa ggaactatag tttcacacac taattacttc ctaatcactt ctttattaag
     2581 aggcacaagg gattgggaag gctgtcttgg agataagcac tgatgttcta ggcaaacccc
     2641 tccatcttaa agttaaaaca accacaggca gcctggaaat gatctatgat ctatgcccat
     2701 acaaggacat tctagatagt tttccttgtt gcttcgtgta tcacacaaga tagaattggc
     2761 actctacgct ttcctttaaa aatcgtcaag aatggttatc aattttttta aacttattca
     2821 aaacaatatt cttatacaca tctcaagccc gctgaaataa agcaaaatgg tggttcatcg
     2881 actgtaatgc caatttcaaa gcagcctgca ctttgacaac acacaagata tacgggaagg
     2941 acagggcatc agcatatatt tcagcccgaa gccgtttcat tcgtttaaaa aactgctttt
     3001 ttcacaattt acctttacaa agcctatacg tatcc
//
LOCUS       DAWGBY010000170         2998 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.170, whole genome shotgun sequence.
ACCESSION   DAWGBY010000170 DAWGBY010000000
VERSION     DAWGBY010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.170"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(419..955)
                     /locus_tag="WHG62_001982"
     CDS             complement(419..955)
                     /locus_tag="WHG62_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ1726030.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(989..1345)
                     /gene="folB"
                     /locus_tag="WHG62_001983"
     CDS             complement(989..1345)
                     /gene="folB"
                     /locus_tag="WHG62_001983"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ1726031.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1401..2003
                     /gene="plsY"
                     /locus_tag="WHG62_001984"
     CDS             1401..2003
                     /gene="plsY"
                     /locus_tag="WHG62_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ1726032.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALVWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNIVKLLEGRESKIGGSR"
     gene            2080..2925
                     /locus_tag="WHG62_001985"
     CDS             2080..2925
                     /locus_tag="WHG62_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ1726033.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
BASE COUNT          739 a          914 c          637 g          708 t
ORIGIN      
        1 gttctcaaat tcaaattggg cttttaggtc tataacaaag aaaaagcctt ggtaggataa
       61 acctaccaag gctttttctt aaaaaaacgc tctattaccg tgcctaaaaa tgcaaaaaag
      121 taaccgtcat aacccttttg ccaaaatcaa tatcatcatc cgatgaatga attgacggta
      181 tataagaaag aattaataag ctcataaacc ggtaagaaaa atcagtaaca aagatattca
      241 ttattaacca ttttaaaaat tatcatgttc gtttgggtaa ttattatacc cttttccctc
      301 ttattactaa agcacgaatg actttaaagg acgcgcccag agacaagccg aaaaggcata
      361 tctcatccgc caaacaaaat gcccaccgac ttactccggc aggcagttca acaccctgtc
      421 aatccttcat cagccagtat tgcaaaccga ttaatgtctt gccgtcttta atttcatcgt
      481 ttgctaatgc ctgacggact tcttctttcg acatcaatac ggtttccgta atctcgtctt
      541 cgtcattggc aagcgtactg cccaaacgca cgccttccgc ttcgaacaga tacatttttt
      601 cgttgcaaaa accgaccgcc gtataaaaac tgtaaagcag gcgcacgctg tcggcaacat
      661 aaggcgtttc ttcagccagt tctctcagcg cacacgctgc catatcctcg cccgccacat
      721 ccagcttgcc cgcaggaagt tccaatgtcg cctgatttgc cgcataccgc cactgccgta
      781 ccaaaacgac cttttcatca tccgttaccg ccaacacgca cgccgctccc ggatgacgga
      841 tgacgatacg ctgcccttca ttgccgttgg gcaacctgac cttatccctg ctgatgctga
      901 caaaaccgcc ctcgtaaatg gtttcgccgc ctaattttac ttccctcaaa tccacttcat
      961 atctcctttc cgtttcctat tctgccgttc aatcttcacg cttgccgcgc tcgatttcca
     1021 cgccaacctc gcgcacgcct tccaaaatac ccggcttgac gattttcacg cgtacccaca
     1081 ccgcgccgaa atatcccaaa accaaatcgg caatatattc cgccaacgct tccaaaagca
     1141 ggaaatcctg ttctttcaga tgtcggcgca gtgtttcgca tacctcggca taatgtaccg
     1201 tattggcaat atcgtcgtcc gaacccgctt tctcgggaac gccgatgtcc aaatcgacaa
     1261 tcagggtctg caaccgttcg cgttcccagc cgtacacgcc gataagcgta tccgccttga
     1321 tgccgtgcaa aaagatttta tccataatcc gccccgtttt ttgctaaaat aaccgcacca
     1381 ttctaagtaa agtaccacaa atgttcaaca taccggctgt tgccgtttcc tatctgatcg
     1441 gctcactttc tttcgccgtc atcgtttcca agtattacgg gatggacgac ccgcgcacct
     1501 acggatcggg caatcctggg gcgaccaatg ttttacgcag cggcaaaaaa aaggcggccg
     1561 cgctgacgct cttgggcgat gccgccaaag gtttagttgc cgttttgctt gcacgcgtgc
     1621 ttcaagaacc gctcggttta tccgacagcg caatcgctgc cgtcgcactc gccgcgctgg
     1681 tcgggcatat gtggccggtg tttttcggat ttaagggcgg caaaggcgtg gcaacggcat
     1741 tgggcgtgct tctggcactc tctcccgcaa ctgccttggt ctgcgcgttg gtttggcttg
     1801 ttatggcatt cggcttcaag gtgtcctccc ttgccgcatt aaccgccaca atcgccgccc
     1861 cccttgccgc actgtttttt atgccgcata cttcttggat tttcgcaacc ctcgcaatcg
     1921 ccatattggt gttgctccgc cacaaaagta atatcgtcaa gctgctcgaa ggcagagaaa
     1981 gcaaaatcgg cggcagccgc tgatttccca tccatccctg tttatgccgt ctgaaccccg
     2041 cttcagacgg catccgaata tcccgccgtt ttaccgacta tgctcagtta cagacacgca
     2101 ttccacgccg gcaaccacgc cgatatgctc aaacacttca ccttgttttt agtgctgcaa
     2161 tatttcaacc gcaaagacaa gccctactgg tacatcgaca cgcacggcgg cgcgggtgtg
     2221 tacaatctcg aaggcagcga ggcacaaaaa gtcggcgaat accggcaagg catcgcccta
     2281 cttcgacaag caaaaaacct gccaaccgag ttaaacggct ttatcgcgca catacaaaaa
     2341 atcctgccct cgcccgaact ttactgcggt tctccgtggc tggcgcaatc gctgacccgc
     2401 gtcggcgaca aattacgcct gtttgagctg caccccaccg actttgtcca tctgcaaaac
     2461 aatatgggcg aagcaggatt gggcaaacgc ggacaagtgt tgcgcgaaga cggttacaaa
     2521 gggctgattt ccctgctgcc gcccccgccg cgccgcgcca ccgtcctcat cgacccgccc
     2581 tatgaggaaa aacaggacta ccggcgtgta acggaaacgc tgaaagccgc tttaaaacgg
     2641 tttgagtccg gctgttatct catttggtat ccctgcctca gccgcgaaga aagccgcaag
     2701 ctgcccgaag aattgaaaaa actcctgccc gacaactacc ttcacgccga acttcacgtc
     2761 cacgcgccga aagccgacgg tttcggtatg cacggcagcg gaatgttcgt catcaatccg
     2821 ccctatctgt tggcggaaca attggcggca aacctccccg ccctgacgcg gctgctggcg
     2881 caagacgaag gcgcgcgcta ccttttggac agcaaaatcc gctgaccccg atgccgtctg
     2941 aaacccttca gacggcatct cccatcaaac aaaaccggac gatataccgg cagccggc
//
LOCUS       DAWGBY010000171         2784 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.171, whole genome shotgun sequence.
ACCESSION   DAWGBY010000171 DAWGBY010000000
VERSION     DAWGBY010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.171"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            108..671
                     /gene="gmhB"
                     /locus_tag="WHG62_001986"
     CDS             108..671
                     /gene="gmhB"
                     /locus_tag="WHG62_001986"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ1726034.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            701..1444
                     /locus_tag="WHG62_001987"
     CDS             701..1444
                     /locus_tag="WHG62_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ1726035.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPYASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            1441..2133
                     /locus_tag="WHG62_001988"
     CDS             1441..2133
                     /locus_tag="WHG62_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ1726036.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHGRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPAPSSLTSAKTFWGV
                     CRKTTGIRFNWRLVGAPEYVADYVCIHELCHLAHADHSRAFWALTHRFAPYTPEAKQW
                     LKIHGRELFALG"
BASE COUNT          671 a          925 c          667 g          521 t
ORIGIN      
        1 accgtactgg tttttgttaa tccactatat cacgcggcac aggcgcatca ctgccgatat
       61 ttcagtataa tgccaccccc gacctgcccc aacccaaagg aaacgcgatg aaactcatca
      121 ttctcgaccg cgacggcgtc atcaatcagg accgcgatga cttcgtcaaa tccgttgacg
      181 agtggatacc tgtcgaaggc agcatggatg cggtggcatt tctgacgcag gcaggctaca
      241 ccgtcgccgt tgccaccaac caatccggca tcgggcgcaa atattttacc gttcaaaacc
      301 ttaccgaaat gcacgccaaa atgcaccgcc tcgtccgtca ggcaggcggc gaaatcaacg
      361 gcatctggtt ctgcccgcac accgatgccg acaactgcaa ctgccgcaag cccaaaccgg
      421 gtatgattga agacatcatc ggacgcttca acgcccaagc ctcggaaacc tggctggtcg
      481 gcgacagcct gcgcgatttg caggcaatcg atgccgtcgg cggaaaaccc gcgctggttc
      541 tgaccggaaa aggcaaaaaa acgctctccc aacacggaca cgaattaccc gaacacacac
      601 aggttttcga taccttgctc gatttctcac aatacatcat gcaggaaaac gccgcaccgc
      661 aagccgactg aacataccgc atttccgaca aggcaaaacc atgctcatca tccgcaacct
      721 gatttactgg ctgatactct gttccaccct gattttcctc tttcccttta tgctgctcgc
      781 ctcgcctttc cgagacgggg cgcacaagat ggcgcgggtc tgggtcaaaa tcctcaacct
      841 ctcgctcaaa cacatcgtcg ggctcaaata ccgcatcatc ggcgcggaaa acatccccga
      901 ccgccccgcc gtcatctgcg ccaaacacca aagcggctgg gaaacgctcg cccttcagga
      961 catttttccg ccgcaggttt acgttgccaa acgcgagttg ttcaaaatcc cctttttcgg
     1021 ctggggcttg aaactggtca aaaccatagg catagaccgc aacaaccgcc gcgaagccaa
     1081 cgagcagctc ataaaacagg ggttggcgcg caaaaacgaa ggctattgga ttaccatttt
     1141 ccccgaaggc acgcgccttg cacccggaaa gcgcggcaaa tacaaactcg gcggcgcgcg
     1201 catggcgaaa atgtttgaga tggacatcgt ccccgtcgcc ctcaacagcg gcgaattttg
     1261 gccgaaaaac tcctttctga aatatccggg ggaaatcacc gtcgtcatct gtccgaccat
     1321 cccgtacgca agcggcagcg aagccgaatt gatgggaaaa tgcgaacacc tcatcgaaac
     1381 gcagcagccg ctcatttccg gcgcaggccc gtttgccgcc aaaatgccgt ctgaaaccgc
     1441 atgaccgcct ttgtccacac cctttcagac ggcatggaac tgaccgtcga aatcaagcgc
     1501 cgtgccaaga aaaacctgat tatccgcccc gccggcacac ataccgtccg catcagcgtc
     1561 ccaccctgct tctccgtctc cgctctaaac cgctggctgt atgaaaacga agccgtcctg
     1621 cggcaaacac tggcgaaaac accgccgccg caaactgccg aaaaccggct gcccgaatcc
     1681 atcctcttcc acggcagaca gcttgccctc accgcccatc aagacacgca aatcctgctg
     1741 atgccgtctg aaatccgtgt tcccgaaggc gcacccgaaa aacagcttgc gctgctgcgg
     1801 gactttttgg aacggcaggc gcacagttac ctgattcccc gcctcgaacg ccacgcccgc
     1861 accacacaac tgttccccgc cccctcctcg ctgacctctg ccaaaacctt ctggggcgtg
     1921 tgccgcaaaa ccacaggcat acgcttcaac tggcggctgg tcggcgcacc ggaatacgtt
     1981 gccgactatg tctgcataca cgaactctgc cacctcgccc acgccgacca cagccgcgcg
     2041 ttctgggcac tgacccaccg cttcgcaccc tacacgcccg aagcgaaaca gtggctcaaa
     2101 atccacggca gggaactttt cgccttaggc tgacgcggcc cgggcaggca tccgccaatt
     2161 cagacctcct cccaaacgga catccggaaa gcagcatcac agccggcgac acataccgct
     2221 gccgccgctt tcagacggca tccgtgccgg aacaggcacg cgcccgcccg attcaaaccg
     2281 cgatgacgct ttgccgccgg ttcggggcag gatggcggca cacacgccgt ctgccgcgtt
     2341 tcatttcaca ccactcttcc gaaacccgaa acccgcccgg tccgacgtgc ggtatgaaac
     2401 gcttaagctg acgcgaagtc ttttactgat ttgcccgcga aaatgccgtc tgaaaggttt
     2461 tcggacggca tttttttgcg tttcccagga tggcggcgga ttcgtaaaag gcggtcaggg
     2521 tggattgtag gatgggttga gacctgccga atccgccgca tctgccaaat ctaccgccgt
     2581 cattcctacg aaagtgggaa tctagaacgc ggggttaaga aaacctgcac cgcgtcattc
     2641 ccacgaacct acatcccgtc attcccacga aagtgggaat ccagaacgta aaatctgaag
     2701 aaaccgtttt acccgataag tttccgcacc gacagaccta gattcccgcc tgcgcgggaa
     2761 tgacgggatt tgaggtttct gttc
//
LOCUS       DAWGBY010000172         2590 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.172, whole genome shotgun sequence.
ACCESSION   DAWGBY010000172 DAWGBY010000000
VERSION     DAWGBY010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.172"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(206..277)
                     /locus_tag="WHG62_001989"
     tRNA            complement(206..277)
                     /locus_tag="WHG62_001989"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(242..244),aa:Arg,seq:cct)
     gene            complement(297..743)
                     /locus_tag="WHG62_001990"
     CDS             complement(297..743)
                     /locus_tag="WHG62_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ1726037.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(748..1722)
                     /gene="ispB"
                     /locus_tag="WHG62_001991"
     CDS             complement(748..1722)
                     /gene="ispB"
                     /locus_tag="WHG62_001991"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ1726038.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYALAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            complement(1738..1926)
                     /locus_tag="WHG62_001992"
     CDS             complement(1738..1926)
                     /locus_tag="WHG62_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726039.1"
                     /translation="MVNIRTPLCGTRHCIVICLFCQSLRGSDNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLTET"
     gene            1946..2254
                     /gene="rplU"
                     /locus_tag="WHG62_001993"
     CDS             1946..2254
                     /gene="rplU"
                     /locus_tag="WHG62_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ1726040.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2279..2551
                     /gene="rpmA"
                     /locus_tag="WHG62_001994"
     CDS             2279..2551
                     /gene="rpmA"
                     /locus_tag="WHG62_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ1726041.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          759 a          698 c          575 g          558 t
ORIGIN      
        1 ccactatatc ataaaacaac agatttccaa gccggaacat cttttacgga gcctgaaaat
       61 catttcatga ttctaccgtc ctaaaggtcg gtttttcaag caggaagaaa aagttttcag
      121 atggcaaaaa agccctccaa cactgaaagg ccttatatcg gaaacttccc gcaacacggg
      181 aaacagacaa atgcaaatcg tcaaacctcg ccaacaggaa tcgaacctgt attttacgct
      241 taggaggcat acgttctatc cgttgaacta tggcgagccg aaatgaaaag gagattttaa
      301 ccctttccga cgacaaaaga caagatgccg gccgcaatca gcggcccgac agggataccg
      361 cccataaatg ccaccccgat aaccgtcccg attaacagcc ctgtaattaa aacaggctgc
      421 tgtcccatca aaggcacgcc gcgtcccgcc agccaagcca cgaaaatacc gataaaaacg
      481 gcggatatca ttttaaaatt caaaaattcg gcaacgggag gaacctgcgc ctttcctgaa
      541 accaacggac tcaaaacccc tatggtcaaa agaatgatac cgagattcaa cccatgcttc
      601 tcgaccaacg ggacaaactg taccaatgcc gtctgctgca tcagcagcaa tatggttgcc
      661 gagatggtaa tcgaattgtt gttgctgacc acccccaaca gaatcagcgt aaccagaaac
      721 aggggaacaa aactgaaatt catcgcctca agacaccctg accaaagatt ccttcgccag
      781 ctgaatcatg gcatccttca cttcgctgtc gggcagggca tccaaggcgg taacggcaca
      841 atcgactgct ttgcgcgcct cgcctatcga atatgccaaa gcatccgaac ggacgacata
      901 atcgtggatt ttctcaaaat agctgcgatc tgcattttcc aaagcagtac gcacatcgtt
      961 cgcaacctgt tcggaaccct gacgcatcag ataaatcaaa ggcaaagtcg gttttccttc
     1021 cgccaaatcg tcgccgacgt ttttgccggt ttcttcggtt tcgccagaat agtccagcac
     1081 atcgtcaata atttggaatg ccgtaccgac atacataccg tagtctttca acgcctgttc
     1141 gtgttcgggg gaagccttgc ccaaaattgc gccgacttga gcggcagctt caaacaattt
     1201 tgccgtttta tattggatga cttggatata ttgttcttcg gtaatgtccg tattgccgat
     1261 gttcatcagc tgcatgactt cgccctcggc aataatgttg gttgcatccg ccatcacttc
     1321 caaaacgcgc atactgcccg aggcaaccat cagttgaaag gcgcgcgtgt ataaaaagtc
     1381 gccaaccaac acagccgccg cattgccgaa cagattgttt gccgttgccc gcccacggcg
     1441 caaatcgctt tcatcgacga catcgtcgtg caggagggtg gaagtgtgga taaactcgac
     1501 catcgccgcc agcgcataca gtttctcgtc atcataaccg accgccttac ccgccaaaat
     1561 cgtcataatc ggacgcaggc gtttgccgcc cgcgctgatg atatatgtac cgatttgcga
     1621 aatcagtgcg acatcggatt gcaccgcacg gttgatgact tcattgactt tggcaaggtc
     1681 ttcaggcaga tgtcgctgga aatagggcag attctcgagc atggcagact ctcaggttta
     1741 cgtttccgtc aaacggcaga taccgcttga aagctgattc aaatagcggg caattatatc
     1801 agcaaagcca tcagggtaca tcttttcaga cggcatatga ttgtccgaac cgcgcaaact
     1861 ttgacaaaac aggcaaataa caatacaatg ccgagttccg cacaatggtg tgcggatatt
     1921 aaccataacc cttatggagt tgagtatgta cgcggtcgta aaaaccggcg gcaaacagta
     1981 taaagtttcc gtcggcgaaa aattgaaagt agaacagata ccagccgaac tcgacagcca
     2041 aatcgaactg accgaagttt tgatgattgc tgacggcgaa tctgtaaaag ttggcgcacc
     2101 ctttatcgaa ggtgcaaaag taacggctaa agtagtggca cacggtcgtg gcgaaaaagt
     2161 ccgcatcttc aaaatgcgcc gccgcaaaca ctaccaaaaa cgccaaggcc accgccaaaa
     2221 tttcacccaa atcgaaatcg tggcaatcgc ctaaccttaa aacttaggag cattacaaat
     2281 ggcaagtaaa aaagcaggcg gcagcacccg caacggtcgc gattcagaag ccaaacgctt
     2341 gggcgttaaa gcctacggca acgagctgat tcccgcaggt tccatcatcg tacgccaacg
     2401 cggtaccaaa ttccacgcag gcgacaacgt aggtatgggc aaagaccaca ctttgttcgc
     2461 caaagttgac ggttatgtcg aattcaaaac caaaggcgcg ctgaaccgta aaactgtcag
     2521 catccgtcct tacaccggtt ctgaagaata atccaaccga tacctgaagc cgcatctttt
     2581 cacgatgcgg
//
LOCUS       DAWGBY010000173         2576 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.173, whole genome shotgun sequence.
ACCESSION   DAWGBY010000173 DAWGBY010000000
VERSION     DAWGBY010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.173"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            1..274
                     /locus_tag="WHG62_001995"
                     /pseudo
     CDS             1..274
                     /locus_tag="WHG62_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            complement(321..1730)
                     /gene="dacB"
                     /locus_tag="WHG62_001996"
     CDS             complement(321..1730)
                     /gene="dacB"
                     /locus_tag="WHG62_001996"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ1726042.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGISDTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDIADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVAKNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1895..2461
                     /locus_tag="WHG62_001997"
     CDS             1895..2461
                     /locus_tag="WHG62_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ1726043.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTVFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          613 a          611 c          715 g          637 t
ORIGIN      
        1 tgatgtatta gatgtgcgcg aatttagcca ttttagcttc gctgaaactt cgttttcgta
       61 tcaatcacag cacacatttt gccgaacgac aaaaccatat taatggaatt gagaactttt
      121 ggaatcaagc aaaacgtcat ttacgcaagt ttaacggcat tcccaaagcg cattttgagc
      181 tgtatttaaa ggagtgcgaa tggcgtttta acaacagtga gataaaagtt cttgttccat
      241 cttaaaacaa ttagtaaaac cgagtttatc ctagttatct aggacagccc cttaaattta
      301 atccactata ttttcctgtt tcaggctcgg cgttctttgc acatcagttt cgcatccagc
      361 cagccgtcgc cgccggagat gatgtttttg gcaacgaagt tgtccaagtc gggcagcagg
      421 gaaacggcgc ggccgctgtt gatgatgacg accaccgcca tcggtttgtc gcccagccaa
      481 taacctgcaa gggcgcggac attgttgagc gtgccggttt ttaagcgcaa cagcccgccg
      541 ctttgtttga agcggttgcg taaagttccg tctgtgccgg cgatgggcag cgtgtcgatg
      601 aaatcttgtg caaacgggct gaaataagcc gtttccaaca tttgcgccat cattctcgcc
      661 gttacccttt cttttctgga cagacctgaa ccgttttcca aaaccaaatc cgcaatatcg
      721 atgcccgaca cggcaagttc gcgccggacg gcagacgccg cctgttcgga aacggcgggc
      781 agtttgccgt cgccgccgag tttgaggaag acggaacgcg caattagatt gtccgaacgc
      841 ttgttcatgt ccgtcaaaat ttccttcatc ggctttgagt gtgcaacggc aagcgtctgc
      901 gcgccttccg gcgtgtcgga tatgccgatg ccgtctgaaa tccgtccgcc gccgagcagc
      961 cagtggttgg taaaactttg ccggatcagt tcgtcaagcg cgaacatccg gacaccgaca
     1021 ggcttgccca aacagctctc gggaatattg ccgcgcaatt tcagcgtatt gtccgaaaaa
     1081 gatgcacgca tcagtttttt gatcgaaggg caggcagctt gggaggcggt aattttcaag
     1141 ttgttttggg cgaaaatatg cggcaaaggc ggatcggtga ggatgtcggt actgtcggcg
     1201 gcattgcgtt cggcgcgcac cataaccata ccggcagaca gcatagttgg attggggggc
     1261 gtcataaacg gcgaaccgct gtcggcttcg aaatcgtcgg ggctgccgac ttcgccccac
     1321 aggctgtggt cgagcatcag gtgtcccgtg atattgcgta tgccttgttc gcgcaactgg
     1381 cgttggacgg caagcaggtt ttcctgattg aaaacggggt cgccgctgcc cgcccaatac
     1441 aggtttccgt caagcgtgcc gtcgtttacc gtaccgttgc ttttaaactc ggtcgcccag
     1501 cggtaattgc tgccgaaggt tttgaaggcg gcaaacgcgg taacgagttt cattgtggag
     1561 gcggggttga cggggacatc cgagcggtgg tcaatgatga cttttccgct gtcaagctct
     1621 tggacatata cggcgatttc gttttgcgga atgcgacctg tatcgagcgc gtgtgcggcg
     1681 agggaggcga gaagcagcag cagggaggcc gctgttttgg ggaaattcat aggtaaatct
     1741 gttacataaa aaaagcaatt ataaggcaaa gccggataag tgggaacgct gtggcggcgg
     1801 gccggcttgt ttgcagggga aatcacatat ataataatcg ctatcattat gaaatgattg
     1861 agacgcacaa acttaatatt caggaggaat gattatggct aagaaaatca gtattttggt
     1921 gggcagcctg cgccgtgctt cttttgcgcg caaagtggca ttgaatgcgg cggagatgtt
     1981 ccccgaaggc tggcaggcgg aaatcgtcga aatcggacat ctgccgcttt acaatttcga
     2041 ttatgacgac cctgcggtgg aagatgtgcc gctgcccgaa agctacacgg ttttccgcga
     2101 aacgattaag gcttcggacg gcattttgtt cgttacgtcc gaaaataacc gcaccattcc
     2161 cgcctgtttg aaaaatgcgg tggacatcgg ctcgaaaccg aatgccgacg tggcgtggaa
     2221 aaacaaaccg gccggcatca tcagccattc cgtcggcaag atgggcggtt acagttcgca
     2281 aaaaaacctg cgccttgcgc tgtcttattt cgatatgccc gtaaccggac agccggaagt
     2341 gtttttgggc aattcgccga cactgtttga tgaaaacggc aaattgatcg actcggcaag
     2401 ggattttgtt cagtcatata ttaatcagtt tgtcggtttg attgaaagaa atgccaaata
     2461 aacaaacaag tcgaaaggcc gcaaaaccgg ttcgggtttt gcggcttttt tatatgggct
     2521 gggcagcgtc aaggtttgcc gtttgccgga taatgcgcgg caaatgaccg gcgtgt
//
LOCUS       DAWGBY010000174         2555 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.174, whole genome shotgun sequence.
ACCESSION   DAWGBY010000174 DAWGBY010000000
VERSION     DAWGBY010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.174"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            44..2257
                     /locus_tag="WHG62_001998"
     CDS             44..2257
                     /locus_tag="WHG62_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ1726044.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPNNDKKLVLAARSLA
                     EAHYPSDAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRGELKKYNVHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSGKAISKIRAYIRQQNAD
                     TVREEGRVQIDKQLAKLTPKPNLQELAENLGFKKLDDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEQAPEKVLDASWAALQEGQMFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVTDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          685 a          800 c          606 g          464 t
ORIGIN      
        1 ctgttacaat aaactcgttt ttatcggaac ggaagacccc atcatgaccg ccatcagccc
       61 gattcaagac acgcaaagcg cgactctgca agaattgcgc gaatggttcg acagctactg
      121 cgccgcgctg ccgaacaacg ataaaaaact tgtcttagcc gcccgttcgc tggcggaagc
      181 acattacccc tccgatgccg ccacgccgta tggcgagccg ctgcccgacc acttcctcgg
      241 cgcggcgcaa atggttcatg aactcgacct gctccccgat gccgtcgccg ccaccctgct
      301 tgccgacatc ggacgctacg tccccgattg gaacctattg gtttccgaac gctgcaacag
      361 taccgtcgcc gagctggtca aaggtgtgga cgaagtgcag aaactcaccc acttcgcccg
      421 ggtggacagc ctcgccacgc cagaagaacg cgcccagcaa gcggaaacca tgcggaaaat
      481 gctgctggcg atggttaccg acatccgcgt cgtgttaatc aaactggcga tgcgtacgcg
      541 caccctgcaa tttttaagca acgcccccga cagccccgaa aaacgcgccg tcgccaaaga
      601 aaccctcgac atcttcgccc cgctcgccaa ccgtttgggc gtgtggcagc tcaaatggca
      661 gctcgaagat ttgggcttcc gccatcaaga gcccgaaaaa taccgcgaaa tcgcgctgct
      721 tttggacgaa aaacgcaccg aacgcctcga atacatcgaa aacttcctca acatcctgcg
      781 cggtgaactc aagaaataca atgtccattt cgaagtcgcc ggccgcccga aacacatcta
      841 ctccatttac aaaaaaatgg tgaagaaaaa actcagcttc gacggcctct ttgacatccg
      901 cgccgtgcgg attctggttg ataccgtccc cgagtgttac accacgctgg gcattgtcca
      961 cagcctttgg cagcctatcc ccggcgagtt cgacgactac atcgccaacc cgaaaggcaa
     1021 cggctataaa agtttgcaca ccgtcatcgt cggtcccgaa gacaaaggtg tggaagtgca
     1081 aatccgcacc ttcgatatgc accaattcaa cgaattcggt gtcgccgcgc actggcgtta
     1141 caaagaaggc ggcaaaggcg attccgccta cgagcaaaaa atcgcctggt tgcgccaact
     1201 tttggactgg cgcgaaaata tggcggaaag cggcaaggaa gacctcgccg ccgccttcaa
     1261 aaccgagctg ttcaacgaca cgatttacgt tttaaccccg cacggcaaag tcctttccct
     1321 gcctacgggc gcgacaccca tcgacttcgc ctacgccctg cacagcagca tcggcgaccg
     1381 ctgccggggc gcgaaagtcg aagggcaaat cgtgccgctg tccaccccgc ttgaaaacgg
     1441 acagcgcgtc gaaatcatta ccgccaaaga agggcatcct tccgtcaact ggctgtacga
     1501 aggctgggtc aaatccggca aggcaatcag taaaatccgc gcctacatcc gccagcaaaa
     1561 cgccgacacc gtgcgcgaag aaggccgcgt ccaaatcgac aagcagcttg ccaaactcac
     1621 gcccaagccc aacctgcaag agcttgccga aaacctcggc ttcaaaaaac tcgacgacct
     1681 ctacactgcc gtcggacaag gcgaaatttc caaccgcgcc atccaaaaag cctgcggcac
     1741 gctgaacgaa cctccgcccg tacccgtcag cgaaaccacc atcgtcaaac agtccaaaat
     1801 caaaaaaggc ggcaaaaacg gtgtgctcat tgatggcgaa gacggtttga tgaccacgct
     1861 tgccaaatgc tgcaaacccg cgccgcccga cgacattgtc ggcttcgtta cccgcgatcg
     1921 cggcatttcg gtacaccgca aaacctgccc ctctttccga cacctcgccg aacaagcacc
     1981 tgaaaaagtg ctggacgcaa gctgggcggc gttgcaggaa ggacaaatgt ttgccgtcga
     2041 tatcgaaatc cgcgcccaag accgctccgg gcttttgcgc gacgtatccg acgcgctcgc
     2101 ccgccacaaa ctcaacgtta ccgccgtgca aacccagtcc cgcgacttgg aagccagtat
     2161 gcggttcacg ctcgaagtca aacaagttac cgacctccca cgcgtcctcg ccagcctcgg
     2221 cgacgtcaaa ggcgtattga gcgttacccg gctttaaata caaaaatgcc gtctgaaagc
     2281 cgtataatgc ttcagacggc attttgattg ccggggtttg ctattttttg ttgcataatc
     2341 aattaaaaac aaaatagtac aatattcaac tttgaaggtc taaccatggc atactctgcg
     2401 gacttaagaa acaaagcttt aaactatagt ggattaacaa aaatcaggac aaggcgacga
     2461 agccgcagac agtacaaata gtacggcaag gcgaggcaac accgtactgg tttaaattta
     2521 atccacgata ttacgaacaa tgcaaaaaca tcagc
//
LOCUS       DAWGBY010000175         2544 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.175, whole genome shotgun sequence.
ACCESSION   DAWGBY010000175 DAWGBY010000000
VERSION     DAWGBY010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.175"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            317..2479
                     /locus_tag="WHG62_001999"
     CDS             317..2479
                     /locus_tag="WHG62_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ1726045.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQHMTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNDNGGKT
                     VPYSALDKRSYLAKIGTSFGDDDHRIVLSHMKDQHRGIRTVREEFAVSEKNSRITIKR
                     QAPAYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKKRYSADDKDNGYAGNVKGPNH
                     TRITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNGEFSIPKKEKKNGQEVDK
                     SQEQQAKDRADEATVHAYKLSNPAKTDTGAYIEAIHEINGFTLTGGLRYDRFKVKTHD
                     GKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTK
                     AERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYIKNHG
                     YELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFKN
                     PNLEIGWRGRYVQKATGSILAAGQRNRDKQLENVVRKGFGVNDVFANWKPLGKDTLNV
                     NLSVNNVFNTFYYPHSQHWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          737 a          728 c          560 g          519 t
ORIGIN      
        1 tttgttaatc cactatattt ccgccgtttt ttatagtgga ctaacaaaaa ccagtacagc
       61 gttgcctcgc cttgccgtac tatctgtact gtctgcggct tcgtcgcctt atcctgattt
      121 ttgttagtcc actatacatt tccgacaaaa tctgtcaaca aaaaacaaca cttcccaaat
      181 aaaaacgata atcagctttg caaaaatccc cccccctgtt aatataaata aaaataatta
      241 ttaattattt ttcttatcct gccaaatctt aacggtttgg atttacttcc cttcatacac
      301 tcaaaaggac gaacaaatga acgccccgtt tttccgcctc agcctgctct cgcttaccct
      361 ggcggcaggt tttgcccatg cggcagaaaa taatgccaat gtcgcattgg ataccgttac
      421 cgtaaaaggc gaccgccaag gcagcaaaat ccgtaccaac atcgttacgc ttcaacaaaa
      481 agacgaaagc accgcaaccg atatgcgcga actcttaaaa gaagagcctt ccatcgattt
      541 cggcggcggc aacggcacgt cccaacatat gaccttgcgc ggtatgggtc agaactctgt
      601 cgacatcaag gtggacaacg cctattccga cagccaaatc ctttaccacc aaggcagatt
      661 tattgtcgat cccgctttgg ttaaagtcgt ttccgtacaa aaaggcgcgg gttccgcctc
      721 tgccggtatc ggcgcgacca acggcgcgat tatcgccaaa accgtcgatg cccaagacct
      781 gctcaaaggc ttggataaaa actggggcgt gcgcctcaac agcggctttg ccagcaacga
      841 aggcgtaagc tacggcgcaa gcgtattcgg aaaagagggc aacttcgacg gtttgttctc
      901 ttacaaccgc aacgatgaaa aagattacga agccggcaaa ggtttccgca atgacaacgg
      961 cggcaaaacc gtaccgtaca gcgcgctgga caaacgcagc tacctcgcca aaatcggaac
     1021 aagcttcggc gacgacgacc accgcatcgt attgagccac atgaaagacc aacaccgagg
     1081 catccgcact gtgcgtgaag agtttgccgt cagcgaaaaa aattcacgga taactattaa
     1141 acgccaagcc cctgcttacc gcgaaaccac tcaatccaac accaacttgg cgtacaccgg
     1201 caaagatttg ggctttgtcg aaaaactgga tgccaacgcc tatgtgttgg aaaagaaacg
     1261 ctattccgcc gatgacaaag ataacggcta cgcaggcaat gtaaaaggcc ctaaccatac
     1321 ccgaatcacc actcgaggta tgaatttcaa cttcgacagc cgccttgccg aacaaaccct
     1381 gttgaaatac ggtatcaact accgccatca ggaaatcaaa ccgcaagcgt ttttgaacgg
     1441 cgaattctcc atcccgaaaa aagaaaagaa aaacggtcaa gaagttgata aatcacagga
     1501 acaacaagcc aaagaccgtg cagatgaagc cactgttcac gcctacaaac tgtctaaccc
     1561 agccaaaacc gataccggcg cgtatatcga agccattcac gaaattaacg gctttaccct
     1621 gaccggcggg ctgcgttacg accgcttcaa ggtgaaaacc cacgacggca aaaccgtttc
     1681 aagcagcaac cttaacccga gtttcggtgt gatttggcag ccgcacgaac actggagctt
     1741 cagcgcgagc cacaactacg ccagccgcag cccgcgcctg tatgacgcgc tgcaaaccca
     1801 cggtaaacgc ggcatcatct cgattgccga cggcacgaaa gccgaacgcg cgcgcaatac
     1861 cgaaatcggc ttcaactaca acgacggcac gtttgccgcc aacggcagct acttctggca
     1921 aaccatcaaa gacgcgcttg ccaatccgca aaaccgccac gtctctgccg ctgtccgtga
     1981 agccgtcaat gccggttaca tcaaaaacca cggttacgaa ttgggcgcgt cctaccgcac
     2041 cggcggcttg actgccaaag tcggcgtaag ccacagcaaa ccgcgctttt acgatacgca
     2101 caaagacaag ctgttgagcg cgaatcctga atttggcgca caagtcggcc gcacttggac
     2161 ggcctccctt gcctaccgct tcaaaaatcc gaatctggaa atcggctggc gcggccgtta
     2221 tgttcaaaaa gctacgggtt cgatattggc agcaggtcaa agaaaccgcg acaaacaatt
     2281 ggaaaacgtt gtacgcaaag gtttcggtgt gaacgatgtc ttcgccaact ggaaaccgct
     2341 gggcaaagac acgctcaatg ttaatctttc ggttaacaac gtgttcaaca cgttctacta
     2401 tccgcacagc caacactgga ccaataccct gccgggcgtg ggccgtgatg tacgcttggg
     2461 cgtgaactac aagttctaaa acgcacatcc cgaaaaaatg ccgtctgaaa gcctttcaga
     2521 cggcatctgt tctgataatt tgat
//
LOCUS       DAWGBY010000176         2532 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.176, whole genome shotgun sequence.
ACCESSION   DAWGBY010000176 DAWGBY010000000
VERSION     DAWGBY010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.176"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            54..611
                     /locus_tag="WHG62_002000"
     CDS             54..611
                     /locus_tag="WHG62_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ1726046.1"
                     /translation="MGFGCREGKEFCKGLSLPEIIRDLLEMPSETAIADITRTYSAHY
                     LNPNNRNMTLFPDALPCLDKLKAQGYWLAVATGKGRAGLDNAISQTATGGYWLATACA
                     GEYPSKPSPEMVFGICGELGLDPKEALVVGDTAHDLHMAANAGAAAVGVTTGAHSREQ
                     LRTAPHLAVLDGLSELPGFLARHYA"
     gene            complement(687..1655)
                     /gene="ispH"
                     /locus_tag="WHG62_002001"
                     /gene_synonym="lytB"
     CDS             complement(687..1655)
                     /gene="ispH"
                     /locus_tag="WHG62_002001"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ1726047.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVQQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1684..2181)
                     /locus_tag="WHG62_002002"
     CDS             complement(1684..2181)
                     /locus_tag="WHG62_002002"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ1726048.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKY"
BASE COUNT          584 a          758 c          625 g          565 t
ORIGIN      
        1 cgtttgggta gaattaggag atatttgggg cgaaaacagc cgaaaacctg tgtttgggtt
       61 tcggctgtcg ggagggaaag gaattttgca aaggtctcag cctgcccgaa atcatccgcg
      121 acctgctcga aatgccgtct gaaaccgcca ttgccgacat cacacgcact tattccgcac
      181 attacctcaa tcccaacaac cgcaatatga cgctctttcc cgatgccctg ccctgtctgg
      241 acaagctcaa agcacaagga tactggcttg ccgtcgccac gggcaaaggg cgggcgggct
      301 tggacaacgc catcagccaa accgccaccg gcggctattg gctcgccacc gcctgcgcgg
      361 gggaatatcc ctccaaaccc tcgcccgaaa tggtattcgg aatctgcggc gaactgggac
      421 tcgatccgaa agaagcattg gtcgtcggcg atacggcgca cgacctgcat atggcggcaa
      481 acgcgggggc ggcggcagtc ggcgtgacca ccggcgcaca ttcgcgcgaa cagctccgca
      541 ccgcaccgca tctcgccgta ttggacggtt tgtccgaact gcccggtttt cttgcacgac
      601 attacgcctg attggtttcc gcatccggca cgcggcaaaa atgccgtctg aagcctgttc
      661 agacggcatt tgtgttgccc aaacattcaa cgtttgcaca aatcgggttt ggtttcgccc
      721 tcgcggcgca gctctttggg caggacgaac acaatgcttt cttccgcacc ctcgccttcg
      781 cgtacggttt cgtgccccca tccgcgtatg gttgccagta cttcccgcac caacacttcg
      841 ggcgcggacg cgcctgccgt tacgccgact ttgtttttgc cctcaaacca tgcgcgttgc
      901 aggtagcctg cattatccac catatacgca tcgattccgc gcgatgccgc cacttcgcgc
      961 aagcggttgc tgttggacga attgggcgaa ccgaccacaa tcacgatgtc gcactgttct
     1021 gccaactctt tgacggcggt ttgccggttg gtcgtcgcat agcagatatc ttccttgtgc
     1081 ggattgcgga tattggggaa acgcgcgttc agcgcggcga tgatgtcttt ggtttcatcg
     1141 accgagagcg tggtttggct gacataggcg agtttgtcgg ggtttctgac ttcgagtttt
     1201 gccacatctc cgaccgtttc gaccaaaagc attttgcccg gcgcaagctg ccccatcgtg
     1261 ccttcgacct cgacgtgccc cttatgcccg atcatgatga tttcacagtc ttgggcatcc
     1321 agtcgggcga cttccttatg cactttcgtc accagcgggc aagtcgcatc aaacacgcgg
     1381 aaaccgcgct ccgccgcttc ttgctgcacc gccttcgata cgccgtgtgc cgaataaacc
     1441 agtgtcgcgc ccggcggcac ttccgccaag tcttcaataa acaccgcacc tttttcacgc
     1501 aggttgtcca cgacgaattt gttgtgaacg acttcgtggc gcacataaat cggcgcgccg
     1561 aactcttcca aagcacgttc gacaatactg attgcccgat ccacaccagc gcagaagccg
     1621 cgcggattgg caaggatgat ggttttctcg ttcataagcc cggtatttcg ttttcagacg
     1681 gcatcaatat ttttcttctt gggttttacg gtggacgatg ttgtccaaca ccgccaacac
     1741 cgcaccgacg cagataaagc tgtcggcaat attaaaggcg ggataaaacc aattttgcca
     1801 ataaaacaat aagaaatcga cgacatgacc gtgtatcagg cgatcgatga cattgcctaa
     1861 cgcaccgccg ataatcatcg ccgcacccgt tttgccgagg gttgcaaact catcgcgcaa
     1921 gatggcgcgt accaaatacg cgctcaccgc caccgccagc accaaaaaaa agtatttttg
     1981 ccagccgccc tgatcggcaa ggaagctgaa cgccgcaccc gggttgtaca ccaaggtcaa
     2041 atcgaaaaag gaaggaatga cattgacgcg ttcccgatac tgaaacgacg acagcaccgc
     2101 ccacttcgac cactggtcca gcacgatggc ggcaagtgcc aatacccaat agcgcgtttt
     2161 acttgaaaca gatgaagaca tatttttcaa cagccggtaa aagagtacca ttttacccga
     2221 aaaccccctt tcctgtaccc gaaacggcaa atgccgtaat cttaaaaccc gtcattcccg
     2281 acaacaccgt aatctcgaaa cccgtcattc ccgcgcaggc gggaatccag acctgtccgc
     2341 acagaaactt atcggataaa aacagttgcc caaaccccgc gttctatagt ggattaaatt
     2401 caaaccagta cggcattgcc tcgccttagc tcaaagagaa cgattctcta aggtgctgaa
     2461 gcaccgagtg aatcggttcc gtactatttg tactgtctgc ggcttcgttg ccttgtcctg
     2521 atttaaattt aa
//
LOCUS       DAWGBY010000177         2413 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.177, whole genome shotgun sequence.
ACCESSION   DAWGBY010000177 DAWGBY010000000
VERSION     DAWGBY010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.177"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(122..1573)
                     /locus_tag="WHG62_002003"
     CDS             complement(122..1573)
                     /locus_tag="WHG62_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ1726049.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGVNVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(1596..2212)
                     /locus_tag="WHG62_002004"
                     /pseudo
     CDS             complement(1596..2212)
                     /locus_tag="WHG62_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
BASE COUNT          752 a          577 c          567 g          517 t
ORIGIN      
        1 ataggaataa gaattcggga caaaatgttt aaaccatttt gtcccgactg ctgtgatgcg
       61 gtttttttga actagcagga cgttacctaa aacctgcgtt gcctgaaacc ctttaagacg
      121 gttaaatccc tctgccgtat ttgtattcta caatcatatt atcgtcggta atgacttccg
      181 ccccagccga aggttccgtc atctgaatca gcatacgaga gacaaccttt tgtgctgcag
      241 catccacggt gctgctgtca aatacgtgcc tgccgctttc cggccaaatc aaccgggaga
      301 gacgttgctt gagcagttct ttattaggga aaactaccgg ggttgccgag ccgactacca
      361 tatgcccata gcggtatgca tagggaatac tgtgtacggc ggtagcaaaa gcatgcgggc
      421 tgtgcgtggt attaaacatt acaataccat ccggggtaag gtggctttgc acctgtttta
      481 aaaattccgc actcaacagg ttggtggaat aggcacgcca gtaccaagtc gtattcatca
      541 aaatcaggtc gaatttttca tcaggatggc gacgcagcca tttcctaccg tcatccaata
      601 caatttcaac acgtttgtcc tgcaaaagcg gggcgatttg cggctcgtcc gcgataaggc
      661 tacggtatgc cggattgatt tccgcaacga tcatcgactg catttccgga atggcagaca
      721 agacgcgcgc ccacgaacct gtactcaatc caacgacgaa aatgcggcgt atgccagact
      781 tcagggaggg tagcagatag gcacgttcga tgccgttgac actattgaat acatcggtat
      841 tgtatgcgcc gtcgtataca ttcaccccat aaacaacctt atcaccatct ctatggtaaa
      901 ccgcaacaat gccgtgtttg ttttcaatca gcctatccgg acggtcagca atattttgaa
      961 agacagaatc cggcagtagg aacatgagga tgccgaacat tagggaaact gctaccgaca
     1021 ctgcattcag tcggagactt ttttggaaca gtgtacaaaa caaagggaca gcagcagaaa
     1081 tcaaacagat gagcaggtaa atctgttggg tggacaagaa atcaagtatc acaaagccga
     1141 taaggaccgg acccaatgca ctgccggcaa cgttggcgaa ataaacattg gaaacctgtc
     1201 gtccggattt gttgccatcc gtacccacat ggtgtacgag cgggaaaatc aaccctctga
     1261 cgacggcaga cagggtaatg aagataccgg cgtggtggac gaagccggaa aaacccgtca
     1321 acaaccacgc agcacccaaa atcaaaaagt cggcaatacc cgcccacaag aagcactgcc
     1381 cgataaaggg aatatcaaca aagcggctgc ggcaaatccg tttgccaaaa tacgcgccga
     1441 cggcgatacc ggtcagaaaa caggcaaggg taaatgaaaa tgcctgaggc acggactgtg
     1501 ctgcgaacga aaacatcctt acccacaaga cttctatacc caagctcaat aagccgctaa
     1561 ggaaagaaag catataaatc aaactagtat tcggtttagt gttcactata tccatccttt
     1621 ctgtaacgca gccatactga agcagcaatc agaaggttaa agcaggctgt cagcgcaatg
     1681 gtttgggaga ggaaaagacg tagaaaaatt cggcggcggc aagcgatccg agtgccgcac
     1741 ccaaagtgtt gaaaaaatat aaggtaccga tagactcgcc aacattatgt attttccggt
     1801 taaaaaaaca ggtcagcaag ggcaaggtcg cgcccatcat aaaggtagga agcagcaata
     1861 agaggaaatt ggcagcagcg atgatgggca aatcagcctc aactaaaaga tgccccaagc
     1921 cggaaatcag acccctgctt accaaaccga acagaccgat ggatacttca gcgatgcaaa
     1981 acagggggat gatacttgaa ggaaaacggt cagcaatgcg tccaccgaaa tacgcaccta
     2041 cacccaagcc gaccataaat acagaaataa tgacagtaat cgaactcaaa tcgataccta
     2101 tgtgactgaa tagaagcctc tgccagctga cctggtaaat cagggcgcag aatccagagg
     2161 cgaaaaacac cagcgacaat cctttcaggg ttttacttgc ggtcgaattc atattttcta
     2221 ttttcaaata ggcggaacta taaatgaaat gtatcaatgt gtaaacattt gtattaaccg
     2281 taggaaatca ccgtattgct caaactgcag gccgggaaaa taaactcgta agcccgcaaa
     2341 cggcgtatca ctgttcaaac tgctgtgcgg cttcacggtg ttataaaaat aatggggctg
     2401 tcctggacaa cta
//
LOCUS       DAWGBY010000178         2327 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.178, whole genome shotgun sequence.
ACCESSION   DAWGBY010000178 DAWGBY010000000
VERSION     DAWGBY010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.178"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            281..1408
                     /locus_tag="WHG62_002005"
     CDS             281..1408
                     /locus_tag="WHG62_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ1726050.1"
                     /translation="MSNWKPNIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLASRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVSKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     DIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
     gene            1438..2316
                     /locus_tag="WHG62_002006"
     CDS             1438..2316
                     /locus_tag="WHG62_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ1726051.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEAFDLPEGSTILGVVLEVKKRF
                     MSAAQARRRVDSDYHP"
BASE COUNT          659 a          584 c          565 g          519 t
ORIGIN      
        1 tagtgtatat taagtacgtc tgatatacac gataccctac gagggtgtaa gctttagttc
       61 acatttaaaa tgacctcttt aaacctgtct ttcggcaggt ttctttttag gttgtttgga
      121 aatcgtgtgc agacaaggtg taaaataggt aacagcataa aataatgcgg ttttaccgcc
      181 catatattta caaaagccaa atttttaaac atatatcctt gatatataca cggcgtaaac
      241 atatactgga aacatcttta aattttccga aattttaaat atgagcaact ggaaacccaa
      301 tattccctat aacgatttac cacccctgcc gccaaaacag gatattgaaa gcaaaaccat
      361 cctgaaacgt tgtatagccg cccgtgcatc ccttgcccgt ttaaagcagg cggcagaact
      421 gataccgaat caagccatgc tgattaacac ccttcctgtt atggaagccc gtgcaagttc
      481 ggaaattgaa aacatcgtaa ccaccacgga caagctgttt caatccctgc aaatggatac
      541 ggaacggcaa gaccctgcca cgaaagaagc cctgcaatac cgcaccgccc tgtttgcagg
      601 ctatgaatca ctggcgagcc gccctttatg cacacaaacc gccatcatgg tctgcaacgc
      661 catcaagcac ccctacgaaa tggccatccg caaaacaggc ggcacagccc taaaaggagg
      721 caacagcgga aatgttgtct ataccccgcc cgaaggagaa gaaaccatac gcggcaagct
      781 ggcaaattgg gagcggttta ttcacgaaag cggcgattta gacccgctta tcatcatggc
      841 ggcggcacat taccaatttg aagccatcca tccgtttacg gacggcaacg ggcggacggg
      901 gcgcatattg aacagcctgc tattgattga aaaagggctt ttggatttgc ctattttgta
      961 tttgagccgc tacatcatcg aaaacagggc ggactattac cgcctgcttt taggcgtaac
     1021 cgaacggcag gattgggaaa gctggataat ctacatctta gacggcgtag ccgataccgc
     1081 cgattggacg gtatcgaaaa tagatgcgat acgccgcctg ttcgagcaga cacgtcaaca
     1141 catacggaca cacgcacaag gaatctacac gcacgaactg gtaaatcttc tgtttgagca
     1201 gccatataca cgcattgcca acctagaagc ggcagggata gccaaacggc agacggcctc
     1261 taagtacctg aaagagcttt cagacatagg tgtgctgcaa gaaatcgcca ttggcaggga
     1321 caaactattc attcatccgc gcctaatgga actattgcgg ggagagggca acagctttac
     1381 ctcattccaa tccctcgtta aagcatagcc aaaataatca ataatccgga ggtcaatatg
     1441 gcaagaaggt caaaaacatt tgaagaagct gctgctgagg ttgaggaacg tttcggtcat
     1501 cgtggcatta agttggtcga gtttgagggt acagccaagc cgtgtgtaat caactgccct
     1561 aaacatggaa accaaacctg ttcgaggtac tccaatatgt tcataggaag tagctggggt
     1621 tgcccctctt gtggtaatga gcaagctgca aaagccggta tagcgaccct taggaagaat
     1681 cacatagcgt tagaaatgct gaaacaggct gtaacaggta tgaccaagca agagcgcatc
     1741 acgacgcaag cctacaatga gatgaccaaa tccgtggcag gttcaaacag catagtcctt
     1801 aacgatgtcc aaggcgatac gaccatcaac aaccatcata cgcatacgca caaccacagc
     1861 gatgccgatg gcaaagcact gtcgatgagg ctcacacccc gtcctttgtt gtcagaccgt
     1921 caggcggcgg ctttcgcccg tacaggcaaa ctcacgggca gtttcgacct gtttgcttcg
     1981 gtggtcgccc cctcgcagta cacgtttgcc gttgccatgc ccgacacgtc catgtcgccg
     2041 gttatcgaaa agggagactt gctggtggtc gagccgcgta tgcgccctgc ggacgaagac
     2101 atcgtactga ttgaactgtc cgacaagcgg ctggtcgtcg cgcaccttgt tatcgatatt
     2161 gcgggcagga tgctgattta tcagacgggc aggccgtctg aagcctttga cctgcccgaa
     2221 ggcagcacga ttttaggtgt ggtgctggag gtcaaaaaac ggtttatgtc cgccgcacag
     2281 gcgagaaggc gtgttgattc ggattaccac ccctgatgtg tggacgg
//
LOCUS       DAWGBY010000179         2256 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.179, whole genome shotgun sequence.
ACCESSION   DAWGBY010000179 DAWGBY010000000
VERSION     DAWGBY010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.179"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            142..2022
                     /locus_tag="WHG62_002007"
     CDS             142..2022
                     /locus_tag="WHG62_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEZ1726052.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPVYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLALPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLDNGTKRVGIHIAAPS
                     LAVKPGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDGE
                     FNVGAPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          604 a          687 c          536 g          429 t
ORIGIN      
        1 aacgctgtac tggtttttgt taatccacta taacgcaagc accgcaaaga cgcgccaacc
       61 ctcccccaac cttttttcag acggcatttt cggtaatctg ctaaaatcgc ccgcttgagt
      121 ttccacagaa aaatccgaaa aatgaatatt ttttacgaag agtccggcca attcaaaatc
      181 gccgccatca tccaaaaaaa cgacgctacc taccaagtcg ataccccaca cggcaaacgc
      241 accaaagtga aggcgaacaa cgtctttgcc gagtttgacg gcgatatggc ggcgtttttg
      301 gaaaacgcgc aggcgcaggc ggcggacatc gacaccgatt tattgtggga agtgtgcggc
      361 gaagaggaat ttaccgctga agccatagcc gaagaatatt acggccatgc gccgaccaaa
      421 accgagctgg cggcgacctt gattgcgctg tacgccgcgc cggtgtattt ctacaaaaaa
      481 gccaaaggcg tgttcaaagc cgcgcccgaa gaaactttaa aacaagcact tgccgccatc
      541 gaacgcaaaa aacagcaaga cgcgcaaatc gatgcttggg cggaagcctt gaaacgcggc
      601 gagatgccgt ctgaaatcgc ggcggatttg aaaaccatcc tgcacgcgcc cgacaagcag
      661 tcgctgacct acaaagcctt taccaaagcc gccgacgcgc tgaaaacctc tgcctacgaa
      721 ttggcgaaaa aaacgggcgg cattacgtcc attccccaat acctgcaaga cgggtttgaa
      781 atcaaatact tccctaaagg aacaggcttc cccgaccttg cccttcccga aatgcccgac
      841 ctgcccaagg ccgacgttac cgccttttcc attgacgacg aatcgaccac cgaagtggac
      901 gacgctttaa gcctgaccga cttggacaac ggcacgaagc gtgtcggcat ccacatcgcc
      961 gcgccgtcac ttgccgttaa accgggcgac aaaatggaaa aaaacatcat ggaacgcttg
     1021 agcacggttt atttccccgg cggcaaaatc acgatgctgc ccgaaaactg gattgccgcg
     1081 ttcagccttg atgcaggcgc acaccgccct gccgtcagca tttatttcga tgtggacggc
     1141 gagttcaacg tcggcgcgcc gacctgcaaa atcgaagcgg tcaacatctc cgaaaacctg
     1201 cgtatccaag ccatcgaacc gcatttcaac gccgaagcgg gcttggacga agcgggcgaa
     1261 atgatgttcg cccaccatca agacctgatt tggttttatc aattcgccat caccctgcaa
     1321 aaagcgcgcg gcaaatacga gcccaaccgt gcgccgcaat acgattacag catcgaattg
     1381 gataaagaag acaacgtatc cgtcgtccgc cgcgaacgcg gctcacccat cgatacgctg
     1441 gtcagcgaga tgatgattct tgccaacagc acttgggcac aaatgctcca tgacaacgac
     1501 ctgcccggcc tcttccgcgt ccaacccacc ggaaaagtac gcatgagcac caaatccgag
     1561 ccgcatatcg gcatgggcgt gcagcattac ggctggttta cctcgccgct gcgccgcgcc
     1621 gccgactaca tcaaccaaaa gcagctgatc agcctgatag acgacactgc cgagccgctg
     1681 tatcaaaaca gcgatgccga gcttttcgcc gcactgcgcg actttgatgc cgcctatacc
     1741 gcctacgccg atttccaacg gcagatggaa gcctactgga gccttgtgta cctgcaacag
     1801 caaggtacaa gcgagctgac cgcgaccatc ctcaaagaag acctcgtccg catcgaaggc
     1861 ctgccgctgg tcacgcgcgc gaccggtatt ccgtttgacg cgctgcccaa atcacaggca
     1921 ttgttcaaaa tcaccgaatt ggatgccgag aagcagtttg tctcgctcaa ctacatcaag
     1981 gcagtcgcac ccgcgggcac aacggcaggc aatgccgtct gaagcccgat acggcaaact
     2041 ccggcaaaaa cagaaacctg aatctcatca ttcccacagt cgggaatccg gttttttggg
     2101 tttccgttgt ttttccgttt caatgaactt ccaagccgcc gttcccgata aatacccgca
     2161 atctaaaatc ccgtcattcc cacgcagatg ggaatctagg tttatccgca cagaaactga
     2221 tatgccgtca ttcccgcgaa agcggaaatc cagatt
//
LOCUS       DAWGBY010000180         2195 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.180, whole genome shotgun sequence.
ACCESSION   DAWGBY010000180 DAWGBY010000000
VERSION     DAWGBY010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.180"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            343..2121
                     /gene="nhhA"
                     /locus_tag="WHG62_002008"
     CDS             343..2121
                     /gene="nhhA"
                     /locus_tag="WHG62_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin NhhA"
                     /protein_id="HEZ1726053.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVETAVLATLLF
                     ATVQASANNEEQEEDLYLDPVQRTVAVLIVNSDKEGTGEKEKVEENSDWAVYFNEKGV
                     LTAREITLKAGDNLKIKQNGTNFTYSLKKDLTDLTSVGTEKLSFSANGNKVNITSDTK
                     GLNFAKETAGTNGDTTVHLNGIGSTLTDTLLNTGATTNVTNDNVTDDEKKRAASVKDV
                     LNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGKKTEVKIGA
                     KTSVIKEKDGKLVTGKGKDENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTG
                     QADKFETVTSGTNVTFASGKGTTATVSKDDQGNITVKYDVNVGDALNVNQLQNSGWNL
                     DSKAVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSV
                     SLGAGADAPTLSVDDEGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLN
                     NRIDNVDGNARAGIAQAIATAGLVQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDGG
                     NWIIKGTASGNSRGHFGASASVGYQW"
BASE COUNT          692 a          519 c          548 g          436 t
ORIGIN      
        1 gattcccgct ttcgcgggaa tgacgagatt ttagattatg ggaatttatc aggaatgatt
       61 gaatccatag aaaaaccaca ggaatctatc agaaaaaaca gaaaccccac cgccgtcatt
      121 cccgcaaaag cgggaatcca gacccgtcgg cacggaaact taccgaataa aacagtttcc
      181 ttagattcca cgtcccagat tcccgccttc gcgggaatga cgagatttta agttggggga
      241 atttatcaga aaacccccaa cccccaaaaa ccgggcggat gccgcaccat ccgcccccaa
      301 accccgattt aaccattcaa acaaaccaaa agaaaaaaca aaatgaacaa aatataccgc
      361 atcatttgga atagtgccct caatgcctgg gtcgtcgtat ccgagctcac acgcaaccac
      421 accaaacgcg cctccgcaac cgtggagacc gccgtattgg cgacactgtt gtttgcaacg
      481 gttcaggcaa gtgctaacaa tgaagagcaa gaagaagatt tatatttaga ccccgtacaa
      541 cgcactgttg ccgtgttgat agtcaattcc gataaagaag gcacgggaga aaaagaaaaa
      601 gtagaagaaa attcagattg ggcagtatat ttcaacgaga aaggagtact aacagccaga
      661 gaaatcaccc tcaaagccgg cgacaacctg aaaatcaaac aaaacggcac aaacttcacc
      721 tactcgctga aaaaagacct cacagatctg accagtgttg gaactgaaaa attatcgttt
      781 agcgcaaacg gcaataaagt caacatcaca agcgacacca aaggcttgaa ttttgcgaaa
      841 gaaacggctg ggacgaacgg cgacaccacg gttcatctga acggtatcgg ttcgactttg
      901 accgatacgc tgctgaatac cggagcgacc acaaacgtaa ccaacgacaa cgttaccgat
      961 gacgagaaaa aacgtgcggc aagcgttaaa gacgtattaa acgcaggctg gaacattaaa
     1021 ggcgttaaac ccggtacaac agcttccgat aacgttgatt tcgtccgcac ttacgacaca
     1081 gtcgagttct tgagcgcaga tacgaaaaca acgactgtta atgtggaaag caaagacaac
     1141 ggcaagaaaa ccgaagttaa aatcggtgcg aagacttctg ttattaaaga aaaagacggt
     1201 aagttggtta ctggtaaagg caaagacgag aatggttctt ctacagacga aggcgaaggc
     1261 ttagtgactg caaaagaagt gattgatgca gtaaacaagg ctggttggag aatgaaaaca
     1321 acaaccgcta atggtcaaac aggtcaagct gacaagtttg aaaccgttac atcaggcaca
     1381 aatgtaacct ttgctagtgg taaaggtaca actgcgactg taagtaaaga tgatcaaggc
     1441 aacatcactg ttaagtatga tgtaaatgtc ggcgatgccc taaacgtcaa tcagctgcaa
     1501 aacagcggtt ggaatttgga ttccaaagcg gttgcaggtt cttcgggcaa agtcatcagc
     1561 ggcaatgttt cgccgagcaa gggaaagatg gatgaaaccg tcaacattaa tgccggcaac
     1621 aacattgaga ttacccgcaa cggtaaaaat atcgacatcg ccacttcgat gaccccgcag
     1681 ttttccagcg tttcgctcgg tgcgggggcg gatgcgccca ctttaagcgt ggatgacgag
     1741 ggcgcgttga atgtcggcag caaggatgcc aacaaacccg tccgcattac caatgtcgcc
     1801 ccgggcgtta aagaggggga tgttacaaac gtcgcacaac ttaaaggtgt ggcgcaaaac
     1861 ttgaacaacc gcatcgacaa tgtggacggc aacgcgcgtg cgggcatcgc ccaagcgatt
     1921 gcaaccgcag gtctggttca ggcgtatctg cccggcaaga gtatgatggc gatcggcggc
     1981 ggcacttatc gcggcgaagc cggttatgcc atcggctact caagcatttc cgacggcgga
     2041 aattggatta tcaaaggcac ggcttccggc aattcgcgcg gccatttcgg tgcttccgca
     2101 tctgtcggtt atcagtggta agggcttttc gcctgtctgc tgtttgggat aggcggaagg
     2161 tttgaaggga agggtggcga tttgccgcct gagac
//
LOCUS       DAWGBY010000181         2192 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.181, whole genome shotgun sequence.
ACCESSION   DAWGBY010000181 DAWGBY010000000
VERSION     DAWGBY010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.181"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            30..515
                     /locus_tag="WHG62_002009"
     CDS             30..515
                     /locus_tag="WHG62_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726054.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDALAFVFGRTGLLVSV
                     SDGGFGWRGGWDGVVWFVYGVFAFLNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAAAVAWIFELLLGSAALGGLRGEAVSEYAFAVWLVSMLTLPKRLTRAPVQPVVFHRK
                     K"
     gene            611..1234
                     /gene="rsmG"
                     /locus_tag="WHG62_002010"
     CDS             611..1234
                     /gene="rsmG"
                     /locus_tag="WHG62_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ1726055.1"
                     /translation="MERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTGHLLKDG
                     GYWAAMKGVYPQGEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            1333..2106
                     /locus_tag="WHG62_002011"
     CDS             1333..2106
                     /locus_tag="WHG62_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ1726056.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVQPAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELMARVSGK"
BASE COUNT          425 a          507 c          762 g          498 t
ORIGIN      
        1 tcggtctgct tcggaagagg gggacggcga tgtttgtgaa cgagaaagat ccttatgcgg
       61 ctctgtttgc gggactggtg tttttgacgc tgccgtttgc gttggcggtg catgatgcct
      121 tggcatttgt gttcggacgg acggggctgc tggtgtcggt gtcggacggc ggattcggct
      181 ggcgaggagg ctgggacggc gtggtgtggt ttgtgtatgg cgtgtttgcg tttttgaacc
      241 tggtcgtgtc ggcgggcctg acgaaactgg cgtacaaaaa gatgatgcgg cggcattccc
      301 gttacgcgct gtttctgtcg ggcgtggcgg cttgcgcggc tgctgcggtc gcgtggattt
      361 tcgagctgtt gttgggcagt gccgccttgg gcgggctgcg cggggaggcg gtgtcggaat
      421 atgcgtttgc cgtgtggctg gtgtctatgc tgacgctgcc caaacgcctg acgcgcgcgc
      481 cggtgcagcc ggtggtgttt cacaggaaaa aataggacgg aacgggggat gccgtctgaa
      541 acccgacacg cggtttcaga cggcatgttt ttccgctaac attacgcctg aatatggaca
      601 ggaagcagat atggaacgca aagaacgcct gcgtgcaggc attgccgcga tggggctgga
      661 tatttcggaa acggcacagg acaggctttt ggcctatgtg gatctgttga aaaagtggaa
      721 caaaacttac aatctgaccg ccctgcgcga cgaggaaaaa atgattgtcc atcatctttt
      781 ggacagcctg acgctgctgc cccatatcga gggtgtgcaa acgatgctgg atgtcggttc
      841 gggcggcggt cagcccggca ttccggcggc ggtgtgccgt ccggatgtgc agataaccct
      901 tttggatgca aatacgaaga aaacggcttt tttacagcag gcggttatcg agttggggtt
      961 ggacaatgtg cgcgtggtat ccggacgcgt ggaggcggtt tcggacgtgc gtgccgatgt
     1021 ggttaccagc cgtgcgtttg cagaactggc ggactttgtg tcgtggacgg ggcatctgtt
     1081 gaaagacggc ggatactggg cggcgatgaa gggcgtgtat ccgcaggggg aaatcggccg
     1141 cctgccgcag gatgtgtgcg ttgaaaaagt ccaaaggctc gacgtgccag gcttggatgc
     1201 ggaacgccat atcgtcatcc tgagcaagcg ttgagcgcac ttcagacggc atgaatacct
     1261 tttttgtgcg gataaaggta aaattccgca ctgtttttct tttttcaaca tcagacggga
     1321 cacgggcggg acatgagtgc gaacatcctt gccatcgcca atcagaaggg cggtgtgggc
     1381 aaaacgacga cgacggtaaa tttggcggct tcgctggcat cgcgcggcaa acgcgtgctg
     1441 gtggtcgatt tggatccgca gggcaatgcg acgacgggca gcggcatcga caaggcgggt
     1501 ttgcagtccg gcgtttatca ggtcttattg ggcgatgcgg acgtgcagcc ggcggcggta
     1561 cgcagcaaag agggcggata cgccgtgttg ggtgcgaacc gcgcgctggc cggtgcggaa
     1621 atcgagctgg tgcaggaaat cgcccgggaa gtgcgtttga aaaacgcgct caaggcagtg
     1681 gcggaagatt acgactttat cctgatcgac tgtccgcctt cgctgacgct gttgacgctt
     1741 aacggcttgg tggcggcggg cggcgtgatt gtgccgatgt tgtgcgaata ttacgcgctt
     1801 gaggggattt ccgatttgat tgcgaccgtg cgtaaaatcc gtcaggcggt caatcccgat
     1861 ttggacatca cgggcatcgt gcgcacgatg tacgacagcc gcagcaggct ggttgccgaa
     1921 gtcagcgaac agttgcgcag ccatttcggg gatttgctgt ttgaaaccgt catcccgcgc
     1981 aatatccgcc ttgcggaagc accgagccac ggtatgccgg tgatggctta cgacgcgcag
     2041 gcaaagggta ccaaggcgta tcttgccttg gcggacgagc tgatggcgag ggtgtcgggg
     2101 aaataggtca atccaaatcg ggctgcccgt gcctttatgc tgtttggccg ggtgcgttaa
     2161 tatggcggat taaaataaaa atacttatat cg
//
LOCUS       DAWGBY010000182         2099 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.182, whole genome shotgun sequence.
ACCESSION   DAWGBY010000182 DAWGBY010000000
VERSION     DAWGBY010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.182"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(44..367)
                     /locus_tag="WHG62_002012"
     CDS             complement(44..367)
                     /locus_tag="WHG62_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ1726057.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(355..594)
                     /locus_tag="WHG62_002013"
     CDS             complement(355..594)
                     /locus_tag="WHG62_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ1726058.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(717..1514)
                     /gene="truA"
                     /locus_tag="WHG62_002014"
     CDS             complement(717..1514)
                     /gene="truA"
                     /locus_tag="WHG62_002014"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ1726059.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALENALAQI
                     AGEAVSTIVAGRTDTGVHATAQVVHFDTTAARPQQAWIRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          480 a          485 c          588 g          546 t
ORIGIN      
        1 tgttaatcca ctataatgaa cacaatcaat tcagactatt caatcaggca aacatctcct
       61 gcaatactgc aaacagtttt tcagccgtac tgttgtctaa atttccaaga tgtttgacca
      121 atccggcttt atccacagcc ctaatctgtt cgggcaaaag caaaccgtct ttatcctgaa
      181 agcggacatt gacgcggaac ggggcaggac ggcttccgct cgtcatggga acgatcagca
      241 cagtcttgag atagttgtgt atttcaggag gagagactac gacacaagga cgtgtctttt
      301 tgatttcgct tcctacggtc gggtctaagg agaccagata gattccgccg cgtactacca
      361 tatccattct ttatccgctt cgttttcaat ttcggaaaaa aaatgctcct gctcggtttc
      421 gacaagcatt gcggcagctt ctgcccatcc cctgcgaacg gtaggacagc ttaaaatgat
      481 attgcccttt tcaactgtaa cagccaagct gtctactgcc cctatttgac ccaataatga
      541 tttgggcaga atcacgcctt gcgagtttcc cattttgcgt atgttgagaa tcatatacgt
      601 accatattca ccagtttatg taataacaat gttagtacct tgatgaggta gtgtcaacat
      661 tgaaaaagat tgcctgacag tttgtccgat ttcaaaatct ccgcgacaag aatgttttaa
      721 agccattcgg ggatttgggg gcggatgatg ccgtatgcct cgggatagtc gacgccggtc
      781 aggtaaagcc cgtcgggcat aaaggtcggt ggggctttga ggcgactgcg ttcttgaatc
      841 agtgcggcga agccttcgac gctgagtctg ccgctgccga catagacgag cgcgcccatg
      901 atgttgcgta ccatgtggtg caaaaaggcg ttgccgtgca aatcgaggcg gacgagtcct
      961 gcgctttggg taaggtcggc gcggtagatg gttttgacgg gggattttgc ttggcattcg
     1021 gcggcgcgga agctggagaa gtcttgttcg ccgatcaaat aggcggcagc ccgacgcatc
     1081 ggttcgatgt cgagtttgag gtgtgtccag cctgccctgt ttttgagcag gggggaacgg
     1141 acgggggcgg attcgagcag gtagcggtag tgccgtccgt atgcgtcaaa tcgtgcatga
     1201 aattcggggg cgacctgtcg ggcgtgcaaa acggcaatgc cttcgggcag gtgggcattt
     1261 acgccgcgta tccatgcctg ttggggacgg gcggcagttg tgtcgaagtg gacgacttgg
     1321 gcggtggcat gcacgccggt gtcggtcctg ccggcaacaa tggtggaaac cgcttcccct
     1381 gctatttggg caagtgcgtt ttccaatgcc gcctgaacgg tcggtacgcc gtcagcctgt
     1441 ttctgccagc cgtaaaagcg gctgccgtca taggataggg ttattgccca gcgttgtttt
     1501 tgtgcggtat ccatcggatt tgggattcgg ataaatgttc agactgcatt gtatcgcaga
     1561 ttttgcaggg aaacggcaaa cgcccagggc gagcggcgtt gtttggggag ttggggggtg
     1621 gatgcagttg ctacgaatcg ctatcctgtg aattcaccct gtcaggagtg cccgaatcgt
     1681 cattctcgcg caggcgggaa tctaggacgt aaaatctaaa gaaaccattt tatagtggat
     1741 taacaaaaac cagtatggcg ttgcctcgct ttagctcaaa gagaacgatt ctctcaggtg
     1801 ctgaagcacc aagtgaatcg gttccgtact atttgtactg tctgcggctt cgtcgccttg
     1861 tcctgatttt tgttaatcca ctatatccga taagtttccg caccgacaaa actagattcc
     1921 cactttcgtg ggaatgacgg gatgcaggtt tccgtatgga tggattcgtc attcccgcgc
     1981 aggcgggaat ctagacctta gaacaacagc aatattcaaa gattatctga aagtctggga
     2041 ttctggattc ccactttcgt gggaatgacg gaatgtaggt tcgtaggaat gacgggatg
//
LOCUS       DAWGBY010000183         1942 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.183, whole genome shotgun sequence.
ACCESSION   DAWGBY010000183 DAWGBY010000000
VERSION     DAWGBY010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.183"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            245..1702
                     /locus_tag="WHG62_002015"
     CDS             245..1702
                     /locus_tag="WHG62_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ1726060.1"
                     /translation="MSRHPAPTGEKTFFDHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGIALIAALATAIKTGLVNLDNFSGILLSTVILAVIVYFTRLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISSGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          435 a          587 c          443 g          477 t
ORIGIN      
        1 accgccctat cggataagcc cttaacagaa aaggctttac ccgcgccgta tcggaacaca
       61 tcctctaaaa tacaatccgt tgaattgaaa aaaatataaa aacatccgcc cgcgaaaaac
      121 ggcagcacgt cgtttgacaa agaatgaaaa tatcggttaa aaaccgattt tcatacaaaa
      181 aacaccgctg ccgtccgcat ccgtttcaga cggtattgag agaaaatctt ttaggagaac
      241 ctttatgtcc cggcatcccg cccccaccgg agaaaaaaca ttcttcgacc accccttcca
      301 gctttccacc ctcttccata tcgaattgtg ggaacgtttt tcattttacg gaatgcaggg
      361 catcctgctg atttacctct actacaccgc cgacaaaggc ggcttgggca tagacaaaac
      421 cctcgccggc ggcattgtcg gcgcatacag cggcagcgtg tacctgtcca ccattttggg
      481 cgcgtggttt gccgaccgcg tatggggtgc ggaaaaaacc ctcttcctct cgggcatcgt
      541 cgtgatgctc ggacacatcg tccttgccgc cgccccgggc ctgtacggcc ttttaatcgg
      601 gctgatattc atcgcattgg gcagcggcgg cgtgaaatct acggccagtt ctatggtggg
      661 cgcattatac gaacaagacg aaatgcgccc gctgcgcgat gcgggatttt ccattttcta
      721 catcgccatc aatatcggcg gcttcctagg cccgctgctg accggcctgc tgcaggaaaa
      781 catcggtttc cattatggtt tcggcgcggc ggcggtcggt atggcattcg gcttgtggcg
      841 ttattccttg ggacgtaaaa acctgcccca ccccaccgtc ccccatccgc tttcaaaagg
      901 acagggcaaa actgcggccg ccgtcggcat cgccctcatc gccgcacttg caaccgccat
      961 caaaaccggg cttgtcaacc tcgacaattt ctccggcatc ctcctatcta ccgtcatcct
     1021 tgccgtcatc gtctatttta cccggctgct gaccaacccc cgcgtcagtt ccgacaacaa
     1081 gcggcacatc atcgcctaca tcccgctttt cctgaccatc tgtatgtttt gggcggtctg
     1141 gtttcagatt tacaccgtgg caaccgtcta tttcgacgaa accgtcaacc gcaccatcgg
     1201 ttcgtttacc gtacccgtcg cttggaaaga ttctatgcaa agcctgtggg tcatcctgtt
     1261 ttccggactg atggcggcaa tgtggacaaa aatggggcgc aaacagccca aaaccccgct
     1321 gaaattcgct atggcggtat ttgttaccgg cgcgtcgttt ttggggtttg tcccctttat
     1381 ttcctccggc acgccgatgc ctattgcggt tttcgcactg atcgtcctcg ccatcacgat
     1441 aggcgaactg atgatttccc cgattgcgct gtccatctcc accaaaatcg caccgccttt
     1501 attcaaaacc caaatggtcg cccttaattt ccttgccttt tcattaggct tcactttggg
     1561 cggcgtattg tttgaaaaag gctatcaggc gggcgacgaa atcggcttct accggctgct
     1621 gttctacatc ggcgcagcca caggcttcct gctgctcctg ctcgtcccca aattgaacaa
     1681 aatgctcgaa ggcacagact aagtcccgcc ccgatgccgt ctgaaccctt cagacggcat
     1741 ttttccgcat aatgaaacca aaccgtttcc acccgacagg acaggctccc cccaaccgga
     1801 aggcagcctg ccgattgtca tttaaatatc tgactgattc cgtctgtttg caagggaaat
     1861 agccgtttat ttccgcttgg gcggaaaccg gttctattga gtaaaaggca ttttatccga
     1921 ctaaattagt gctgcatcaa cg
//
LOCUS       DAWGBY010000184         1906 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.184, whole genome shotgun sequence.
ACCESSION   DAWGBY010000184 DAWGBY010000000
VERSION     DAWGBY010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.184"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(254..1435)
                     /locus_tag="WHG62_002016"
     CDS             complement(254..1435)
                     /locus_tag="WHG62_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ1726061.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQAQLTEQP
                     QVTNGVQGNQVKVTKAKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGG
                     GASQWGNRESFIGLAGEFGTLRVGRVANQFDDASQAINPWDSNNDVASQLGIFKRHDD
                     MPVSVRYDSPEFSGFSGSVQFVPAQNSKSAYKPAYYTKDTNNNLTLVPAVVGKPGSDV
                     YYAGLNYKNGGFAGNYAFKYARHANVGRNAFELFLIGSATSDEAKGTDPLKNHQVHRL
                     TGGYEEGGLNLALAAQLDLSENGDKAKTKNSTTEIAATASYRFGNAVPRISYAHGFDL
                     IERGKKGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHK
                     F"
BASE COUNT          478 a          482 c          436 g          510 t
ORIGIN      
        1 tttttggcgc atttttatgc gtcaaatttc gttaacagac tatttttgca aaggtctcac
       61 tatatgtgca aaccaagccg aaatgcgaaa taccgtctga aaatctttca gacggtattt
      121 gctgtcttta ttgccgtttt tcttccgtat ccggattttt gtttggggct gaagcagatt
      181 ggcagtcaga ttgcaatcaa agaatgaagg caagccgtca aaaacaaagc tatccgcttc
      241 accgccccga tatttagaat ttgtggcgca aaccgacgga ggcggcatta atttgagtgt
      301 agttgccgat gccggtattg cgtttcagcc aagcgccaga cacgatggcg gaagtgcgtt
      361 tggaaaaatc ataatcaacg ccggcgatga tttgatcgta gctggtattt tcgccttttt
      421 taccgcgttc gatcaagtcg aaaccatggg catagctgat gcgtggaact gcattaccga
      481 agcggtagga agcagtcgcg gcaatttcgg tcgtactgtt tttggttttg gctttgtcgc
      541 cattttcaga caaatccaac tgggccgcca aggcgagatt caagccgcct tcctcatagc
      601 cgcccgtcag gcggtgtacc tgatggtttt tcaagggatc ggtacctttg gcttcatcac
      661 tcgtcgcgct gccgatcaag aacaactcaa aagcattacg tccgacattg gcgtgtctcg
      721 catatttaaa ggcatagttc ccggcaaaac cgccattttt gtaattcaga ccggcataat
      781 acacatccga tccgggcttg ccgacaacag ccggaacgag agtaagatta ttgtttgtat
      841 ccttagtata ataagccggc ttataggcgg acttgctgtt ttgagccgga acgaattgga
      901 cgctgccgct gaaaccggaa aattccggag aatcgtagcg tacggaaacc ggcatatcgt
      961 cgtggcgttt gaaaataccc aattgcgaag ccacatcatt attgctgtcc caaggattaa
     1021 tggcttggct ggcatcgtca aactgatttg caacgcgacc gacgcgcagc gtaccgaatt
     1081 cgcctgccaa gccgataaag gattccctgt tgccccactg ggacgcgccg ccgccggcaa
     1141 cggatacgtc ttgctcaagc tgccaaacag ccttcagccc ttcgcccaaa tcctcgctcc
     1201 ccttaaagcc gataaacgag ccgaaatcgc tgattttcgt cctgatgcgg cttttggcct
     1261 tagtaacttt tacctgattg ccttgcacac cgttagttac ttggggctgc tcggtcaatt
     1321 gcgcctggat gttcctgcct tccacgccgg ctttgatttc gccgtacagg ctgacatcgg
     1381 caacggccgc aagcggcagt gcggacaata cgagggcggt aagttttttt cgcatatcgg
     1441 cttccttttg taaatttgat aaaaacctaa aaacatcggg caaacacccg atacgtcttc
     1501 aattataccc ccccccccgc aaaaaaccat ttttcagaac aaatatctga taaatgccgc
     1561 aacctttatt ttaaaaatga ttatattttg atataaaaca atagcttatt ttttcaaaaa
     1621 acgttgtgtt tctacaacac aattcaagcg cagacctcgt gcgggccgat gcgctgctac
     1681 ccggatgcag tcccagcttt ttaaaacgcc ataaaaaaac acacgcggca ctttatagtg
     1741 gattaacaaa aaccagtacg gcgttgcctc gccttagctc aaagagaacg attctctaag
     1801 gtgctgaagc accaagtgaa tcggttccgt gctatttgta ctgtcttcgg cttcgccgcc
     1861 ttgtcctgat ttttgttaat ccgctataaa gaccgtcggg catctg
//
LOCUS       DAWGBY010000185         1844 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.185, whole genome shotgun sequence.
ACCESSION   DAWGBY010000185 DAWGBY010000000
VERSION     DAWGBY010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.185"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            9..221
                     /locus_tag="WHG62_002017"
     CDS             9..221
                     /locus_tag="WHG62_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease III domain protein"
                     /protein_id="HEZ1726062.1"
                     /translation="MELETVVPPEEGEGEGEGADGEMPEYLELHGGREDDISAPSQPE
                     PPTRNIKPLLFGLLIAFLGYLLGKIF"
     gene            256..1767
                     /gene="ubiB"
                     /locus_tag="WHG62_002018"
     CDS             256..1767
                     /gene="ubiB"
                     /locus_tag="WHG62_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ1726063.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAAIAVVLLLILLLK"
BASE COUNT          413 a          498 c          500 g          433 t
ORIGIN      
        1 cactacatat ggagttagaa acggtcgtgc cgccggagga aggtgagggc gaaggagagg
       61 gcgcggatgg ggaaatgccc gaatatcttg aacttcatgg cgggcgggaa gatgatattt
      121 ccgcaccttc gcaacccgaa ccgccgaccc gcaatatcaa accgctgctt ttcgggctgc
      181 tgattgcctt tttgggctat ctgctcggta agattttttg attgtccgat aaatgctgta
      241 ttcgggattt tatatatgaa atggttgaaa cgcctgacgg tcattgtcgg gactttttac
      301 cgctatcggc tggcaggtct gtgtgcttcg ctgatgggta gcggttggat atgcgctctg
      361 ctgaaaatga tgccgcagtc gtccaaattg aaaaacgaac cgcctgccgt ccgtctgcgc
      421 cttgccttgg aaagcctggg gccgattttc atcaagttcg ggcaggtttt gtccacacgc
      481 cccgatttga ttccgcacga ttacgccgtc gaactggcaa agctgcaaga caaagtgccg
      541 ccttttgacg cgcggctttc gcgtgaacaa atcgaaaaat cgttgggtca gtccatcgaa
      601 aagctgtatg cggaatttga aaccgagccc atcgccagcg cgtccatcgc ccaagtacac
      661 aaagcccgcc tgcattcggg cgaacgagtg gcggttaaag ttttgcgccc caaccttttg
      721 ccccttatcg aacaggattt gtcgctgatg cgtttcggcg cggcctgggt cgaacgcttg
      781 ttttcagacg gcaggcgtct gaagccgctc gaagtggtgg cggagttcga caaatacctg
      841 cacgacgagt tggatttgat gcgcgaagcc gccaatgccg gacagctcgg gcgcaatttc
      901 caaaacagca atatgctgat tgtgcccaag gtgttttacg actactgcac cagcgacgtg
      961 ctgacaatcg aatggatgga cggcacgccg gttgccgaca tcgccaaact caaagcagac
     1021 ggcatcgatt tgcacaaact cgccgattac ggcgtggaaa tctttttcac gcaggtcttc
     1081 cgcgacggct ttttccacgc ggatatgcac cccggcaata ttttggttgc cgccgacaac
     1141 cgctacatcg ccctcgattt cggcatcgtc ggcacgctga ccgattacga caaacgttat
     1201 ctcgccatca atttcctcgc ctttttcaac cgcgattacc ggcgcgtcgc caccgcccac
     1261 atcgaatcgg gctgggtgcc tgccgacacg cgtgcggaag aattggaagc cgccgtccgc
     1321 gccgtgtgcg aaccggtgtt caacaaaccg atttcgcaga tttccttcgg cttggtgctg
     1381 atgcgcctgt ttgaagtcag ccgccgcttc aatgtcgaaa tccaaccgca gcttgtgctg
     1441 ctgcaaaaaa cgctgctcaa catcgaaggc ttgggccgcc agctcgatcc cgatttggac
     1501 ttgtggaaaa ccgccaaacc gtttttggtg aaatggatga acgggcaggt cggccctaaa
     1561 gccctttggc gcaacctcaa aaacgaagcc cccgactggg cgcaaatcat tccttcattg
     1621 ccgcgcaaaa tcagtgcgtt gattgatgaa aaccgccagc aggaaatgcg tgatgcctat
     1681 atccatttgg tcaaagtgca gcagcggcaa agcctgtggc tggcggcgat agcggttgtt
     1741 ttgctgctga ttttgctttt gaaataggtt ttgtccgaat cattgcccga ctccgcccgt
     1801 ttataaggaa accggttata gtggattaac aaaaaccagt acag
//
LOCUS       DAWGBY010000186         1829 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.186, whole genome shotgun sequence.
ACCESSION   DAWGBY010000186 DAWGBY010000000
VERSION     DAWGBY010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.186"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            325..1770
                     /gene="zwf"
                     /locus_tag="WHG62_002019"
     CDS             325..1770
                     /gene="zwf"
                     /locus_tag="WHG62_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ1726064.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTAGFLAKAETNSKIHIKQNFSDEAWASFVKRIEYLKVDVTEAADFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQACENLAAIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAARGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT          505 a          420 c          480 g          424 t
ORIGIN      
        1 aaaggtatac cgtctgaaag tgggaagcgg gtgttattat agtacaaaat ttgtaatttt
       61 gttacaaaaa aaatcagaca tcgaaaagaa atttgattta aatcgcagaa tctttcgatt
      121 gctgtaacgg aataggggaa acctgcccga tttttggact aggtcaaata aattgtaaaa
      181 atgggaatag acaaaaagtg tagcggtgtg tagtattact actcattatg ccgcctgcct
      241 ttgtttccga tattgtgatg cagcgtgatg gggaaaacag gtttcaaacg gcatcgaaaa
      301 attctttcct gacgagataa tgcgatgagt acacaaacaa attttgattt ggtgttgttc
      361 ggtgcgaccg gcgatttggc aatgcgcaaa cttttgccct gcctgtatca ggcgcacgtg
      421 gccggtttgc ttcatcccga aggtcgtatt ttgggtgtga gccgcagcga attggatacc
      481 gccggttttt tggcaaaagc ggaaacgaat tctaaaatcc atatcaaaca aaatttttca
      541 gatgaagcgt gggcttcgtt cgtcaaacgc atcgaatacc tgaaggttga tgttaccgaa
      601 gcagccgatt ttgccgcttt gggcgatttg gtcaaagcgc gcaaagaaac cgacaacgtc
      661 gtcatctatc tgtccaccgc gcccaaattc ttcgcgcaag cctgtgaaaa ccttgctgcg
      721 atcggtttga atgccgacaa tgtgcgcgta gttttggaaa aaccgttggg tacggatttg
      781 gcttcttccc agcaaatcaa taccgatgtt gcgcgttatt tcaaagaagg gcaaatttac
      841 cgcatcgacc actaccttgg caaagaaagc ctgcaaaacc tgcttgcgct gcgttttgcc
      901 aatgtaatgt tcgagccgct gtggaacaat aaatatatcg aaagcgtgca gttgaccatc
      961 gccgaacagc tcggtgtgga agagcgcggt gagttttacg acattaccgg cgcgttgcgc
     1021 gatatggtgc aaaaccattt gatgcagatg ttgtgcatga ctgcgatgga agcccccgcc
     1081 agcttggatg ccgacgcggt gcgcgatgaa aaagtcaaag tcatcaagtc attgaagccg
     1141 ctgaccgtcg agtctgtcaa tgaaaacgtc gtgcgcggac aatataccgc cgccagaggc
     1201 atgaacggct atcttgaaga aatcaacgtt ccgcaagaca gctttaccga aacctacgtc
     1261 gccattaaag ccgaaatcga aaacgaacgc tggaagggcg ttcccttcta cctgcgtacc
     1321 ggcaaacgca tggcgggcaa agtggcggaa atcgttttga acttcaaaga tttgaacagc
     1381 catatttttg aaggcagccg caccgcgccc aaccggctcg ttatcgagtt gcaaccatat
     1441 gaatccgtgc gcctctatac gcagatgaaa accccggggg caggaaataa ggtcgaaacc
     1501 gtgccgctgg caaccgattt gggcaaagca ttggaaggcc gccgcgcgga agcttacgag
     1561 cgcctgctgc tggatgtgat taacggcaaa ctcgctttgt ttaaccgccg cgacgaactt
     1621 gaagccgcgt gggaatatgt gatgccgatt ttggaaaact ggacaaataa caccacgccg
     1681 ccgcacggct acggcgcaca ctcgtggggg cctgaagccg cgcgcgaact attggcgcgc
     1741 gacggacaca agtggcacga agagcagtaa tacaataatg cgttcagacg gcatggggtt
     1801 tgaaatgccg tctgaacata agtaaagca
//
LOCUS       DAWGBY010000187         1824 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.187, whole genome shotgun sequence.
ACCESSION   DAWGBY010000187 DAWGBY010000000
VERSION     DAWGBY010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.187"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            55..1224
                     /gene="metZ"
                     /locus_tag="WHG62_002020"
     CDS             55..1224
                     /gene="metZ"
                     /locus_tag="WHG62_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ1726065.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            1319..1525
                     /locus_tag="WHG62_002021"
     CDS             1319..1525
                     /locus_tag="WHG62_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ1726066.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(1624..1736)
                     /locus_tag="WHG62_002022"
                     /pseudo
     CDS             complement(1624..1736)
                     /locus_tag="WHG62_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          441 a          477 c          469 g          437 t
ORIGIN      
        1 ttaaacaacg ggcgcacgct ccgttgccga acggataaaa ccgaggaatc accgatgagc
       61 aaaaaactcc atccgcaaac gctcgccata cgcggcggca aagaacaaac cgaataccgc
      121 gaacacaatc aggcattgtt cctgaccagc agcttcatgt gggacaacgc ccaacacgct
      181 gccgatttgt tttcaaaaaa aatcaaaggc ttcacttata cccgtaccgc caacccgacc
      241 acagccgcct ttgaaaaacg catcgccgct ttggaaggtg cggaacgcgc ggtcgccact
      301 tcgaccggca tgtccgcgat tcaggcggcg tttttcacct ttttgcaggc gggcgaccat
      361 gtgatttcca gccgcagcct gttcggcacg accgtcggct ttatcaataa catcgttacc
      421 aaattcggca tcgaagtgag tcacgtgtcg ccgactgata taaacgaatg gaaagccgcc
      481 gtcaaagcca acaccaaact gctgtttttg gaaacgccgt ccaatccctt gggagaagtg
      541 gccgacttgg aagccttggc ggaattggcg cacggcatcg gcgcgctctt ggtggtggac
      601 aacagcctgc tgtcgcctgt cggctctcag cctttgaaac acggcgcgga tatttccgtt
      661 tcctccgcga ccaaagccat agacggacac gggcgcgtga tgggcggcgt gttggcgggt
      721 tcggaagaac tgatggcgca ggtcgccgtt tactgcaact cttgcgggct ggcaatgtcg
      781 ccgtttaacg catggcagtt gttgagcggc gtggaaaccc tgtctctgcg tatggaaaaa
      841 cagttcgaca acgccttgaa aatcgcgcaa tggctgcaag cgcagccgca ggttcaagcc
      901 gtgtattaca ccggattacc cgaccatcct caggcggagc ttatccgcaa acagcaaaac
      961 ggcggcggca tcgtcatcgg ctttgaagtc gccgaccaag cagccgcgtg gaaagtcgtg
     1021 gacggcgtcg aacttttctc ccgtaccgcc aacctcggcg acgtgcgctc gaccattacc
     1081 catccgtgga caaccacgca cggcaggatg cagcccgaag aaaaactcgc cgccaacatc
     1141 cgccccggat tggtgcgcct gtcggtcggt ttggaatatg ttggcgattt gattgacgat
     1201 ttgaaacagg cactcgcgcg ttgattgcgt gttcagacgg catcggcgga aaaacaccgc
     1261 aaatgccgtc tgaaaccctt atcttatatg acatacacgt caacaatagg aaaaaaatat
     1321 ggatgaagcg gtttttgccg attgggcgtt gaaaatctgc ctgaccggct tgattatttt
     1381 tttgggtttt atcgtttgga atttgggcaa ggagtctaaa gcgggcaaat tcggcatcgc
     1441 cattttgttt ttggttttgg gcttgggcgt gtttggtttt gtgttcaaag agttattgat
     1501 taagtttttg gtattgccga aataggtttg cggtctgtca aaatgccgtc tgaaatcata
     1561 aaaagtaatc tgcaccctaa aagtttgatt taaccgccaa ctgattaagg tgcggatttt
     1621 tatgacaaaa tatagtggat taacaaaaac cagtacggcg ttgcctcgcc ttgccgtact
     1681 atttgtactg tctgcggctt cgtcgccttg tcttgattta aatttaatcc actataaaaa
     1741 tcatctttcc gcagtcattc ccacggatgc gaaagcctgt ctttttgaat cccggataat
     1801 tttacatcgt cattcccgcg cagg
//
LOCUS       DAWGBY010000188         1807 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.188, whole genome shotgun sequence.
ACCESSION   DAWGBY010000188 DAWGBY010000000
VERSION     DAWGBY010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.188"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            349..681
                     /locus_tag="WHG62_002023"
                     /pseudo
     CDS             349..681
                     /locus_tag="WHG62_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
     gene            complement(972..1766)
                     /locus_tag="WHG62_002024"
     CDS             complement(972..1766)
                     /locus_tag="WHG62_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ1726067.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
BASE COUNT          458 a          536 c          411 g          402 t
ORIGIN      
        1 gtttgggtag aattaggaga tatttggggc gaaaacagcc gaaaacctgt gttggggttt
       61 cggctgtcgg gagggaaagg aattttgcaa aggtctcaag ctatgccggc tgctgccgcc
      121 cacttcatct gcgccaaatc ctgccgccca ccgccgaagc cctcatgcgt tcgcggtaca
      181 gcgcgtatgt gctactatag tggattaaca aaaaccagta cagcgttgcc tcgccttagc
      241 tcaaagagaa cgattctcta aggtgctgaa gcaccgagtg aatcggttcc gtactatttg
      301 tactgtcttc ggcttcgtcg ccttgtcctg atttttgtta atccactata catcatcgct
      361 actaccgttc cggcacaaca aacattcctc gatgccgccg aactgatgca gtggagcaga
      421 gaaaccgaat ggctgggctt gaatgtcatc gcacaccgca acttcggcaa acagcacgcc
      481 caagtcgaat ttgaagcctg cttccgagac ggacaacacc gatctgcgca tcacgaactg
      541 tccggcttcg tcaacatcgg cggacaatgg tattttatcg atcctaccgt tccgcatcct
      601 gcgatgaaac aaccctgcat ttgcggatcg ggcaaaaaat tcaaagcctg ctgcggcaaa
      661 tatctgcaac ctgtcgcata aaaatgccgt ctgaacgttc agacggcatt tttaacgcgc
      721 aaaaaaaacc attcatacca agggtaagta tgaatagtca atacattgcg ggaaaacgtc
      781 ttacttgctg cactgccgaa aagggagaaa cggcagcggt aatcagcgga aaggattgta
      841 cccgtataaa tgttaagtaa cgttaattat gaaaatataa ccgatgtttc ggcacacaat
      901 ccgcaactgt ccggcgcagg cggcggcaaa gcctgtttat tcaaaccctt attcctgccc
      961 atctgtccac cttactggtt ttcccgtatc cacccgaccc agcgttcaaa cagcttcggt
     1021 tcgagcgcgg caacgaccga gcgtttgaac acgtgttcac cactccaaaa cccgtcgcct
     1081 tccaaagtcg tcagcctgcc gcccgcctcc tcgaaaatca acgcacccgc agcatagtcc
     1141 cacagcttct gcccaccgtg aacataaaca tcataacgcc cgcacgccag ataacaccaa
     1201 tccaacgtac tgctgcccat actccgtatc gttccaaaag gcgcgagcgt actcatgcgg
     1261 ctggacagtt tgcccgaacg cagatatttg atttccacgc ccgcgattgc ctcattcaac
     1321 ttcttatcca cgagacgcaa aggcaggcgt gtcccgttta aaaacgcacc ctgcccgcgt
     1381 tcagcataaa aacattcgcc gctgaccgga ttgtagatta cgcccaattc ggcgcgcccg
     1441 ttgcggacaa acgccaccga cacggcaaaa tgcggcagcc cgttgacaaa attgtttgtc
     1501 ccgtctatcg gatcgacaat ccacagcccc ttttcccccg aatattgttc ccacagagcc
     1561 gactgttcct gtcgcgacat ttcctcgccc aacatcgggc aatcgatcag aagcggcaac
     1621 gcggcggcaa aagccgtctg cgcggcaatg tccgcctcgc tcaacatcga accgtcttcc
     1681 ttgcggtggg acggcgtatt caaaaaacgc ggcataattt cggtttgcgc gatatggcgc
     1741 acgactttct gcaaacggtg taacacttcc tactgtcctc atattttgaa cttgcggcac
     1801 gcgaacg
//
LOCUS       DAWGBY010000189         1732 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.189, whole genome shotgun sequence.
ACCESSION   DAWGBY010000189 DAWGBY010000000
VERSION     DAWGBY010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.189"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            170..1144
                     /locus_tag="WHG62_002025"
     CDS             170..1144
                     /locus_tag="WHG62_002025"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ1726068.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALCGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPAKPGKLRLMYEANPMS
                     LILEQADASASNAYQAMLDIQPENLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(1303..1521)
                     /locus_tag="WHG62_002026"
     CDS             complement(1303..1521)
                     /locus_tag="WHG62_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ1726069.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT          476 a          483 c          371 g          402 t
ORIGIN      
        1 ccactataag aataaatatc ccctcatccg cctgccgcgt tccgacttgc cccgcgccgt
       61 ttttttccac tacaatccca cgcgatatct ggcggaacgc accaaaggaa cgccccgcag
      121 caatctgccg cctttcagac ggcacaaaca tttccgaaac gagcaaacta tggacacact
      181 gacccgattc ctccccgaac acctgcaaca aaaccagctg cccgaagcac tctgcggcgt
      241 tttactgtcc gttgtttccg cctgcaccga aatcaacgcc aaagtccgcc tcggcgcact
      301 ggccggcgta ttgggtatgg cgggcacggg caatattcag ggcgaagacc aaaaaaaact
      361 ggatgttatc gccaacaaca tcatgattga cacactcaaa gccaaccctg ccgttgccgg
      421 tttggcaagc gaggaagaag actctttcgt aagtgccggt gaaaacggac gctatctcgt
      481 cctattcgat cctttagacg gatcgtccaa tattgatgtc aacatttccg tcggtacgat
      541 tttctccatc cttgaaaaac ccgaaggcgc attggcaacc gaatcattcc ttcaaacggg
      601 cagacagcag cttgccgctg gttacgttct ttacgggcct caaacccagc tcgtattcac
      661 attcggacac ggcgtatata tgttcacgct caatgccgaa aacgaatttg tgctgacaaa
      721 agaaaaaccg aaagtacccg aaagtaccaa agaatttgcc atcaatatgt ccaaccgccg
      781 ccactggctg ccccccgtcc aacaatacat cgacgagctc ttggcgggcg aaaccggcac
      841 gcgcggcaaa aactacaata tgcgctgggt agccagcatg gttgccgaaa tccaccgcat
      901 cctgatgcgc ggcggcgtgt tcatgtatcc gcaagacaaa cgcgaccccg ccaagcccgg
      961 caaactgcgc ctgatgtacg aagccaaccc tatgagcctg atactcgaac aggcggacgc
     1021 atcggcaagc aacgcatatc aagccatgct cgacatacag cccgaaaacc tgcaccaacg
     1081 cgtcgccgtc attatgggca gcagcgaaga agtggattac ctcaaccgcc tgcattcaaa
     1141 ataaaaggca gcctgaccga taaagaaagg cggcagcgcg catccgacgc tgccgccgat
     1201 atttcgttta tagccttaaa aagatagaaa accacctttc cgaacggcaa aaatgccgtc
     1261 tgaaaagttt tcagacggca ttttaaaaat taaagcccga atttatttgc ccgctgcttt
     1321 ttgcaggatg gcgtacaact cgtctttcag tttcaatttg gcttttttca gctcatcgat
     1381 ggtttccgca ccgctggtaa ccggattgtt gaccagaccg gtaattttat cgtccagctc
     1441 gttgtgttcg tcgaacagac gggcgaagcg ggaattttcc tgtttcaatt tggaaatcaa
     1501 atcacggtat tctgggaaca tatcgctttc ctctcttggt ttacggttaa aaagtcaaat
     1561 tgaatcttta cattaattat aacaaagata atatttttat ccagtgtttt atcggatacg
     1621 gcaaaatttt cttttaacac cgccgtccgg ttgataaaaa cgttgacaat atcacgcttt
     1681 acgcataaat tttcagcctt tcctactgta tagtggatta acaaaaatca gg
//
LOCUS       DAWGBY010000190         1708 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.190, whole genome shotgun sequence.
ACCESSION   DAWGBY010000190 DAWGBY010000000
VERSION     DAWGBY010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.190"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            59..1432
                     /locus_tag="WHG62_002027"
     CDS             59..1432
                     /locus_tag="WHG62_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ1726070.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKPEMREPRQRNRYESAKAQREKNTRPENAANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
     gene            1612..>1708
                     /locus_tag="WHG62_002028"
     CDS             1612..>1708
                     /locus_tag="WHG62_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEZ1726071.1"
                     /translation="MSTQFDVAVIGAGPAGSVASALLRKKGYSGLN"
BASE COUNT          438 a          561 c          406 g          303 t
ORIGIN      
        1 cccatcctat cggtttcccg cttcagacgg cataaggtct gaaagaaaga ctacaattat
       61 gagtaatcca ttttcctctt taggtttggg tacggaactc gtttccgcac tgaccgcgca
      121 aggttacgaa aacccgacgc ccatccaagc cgccgccatt cccaaagcac tcgccggtca
      181 tgatttgcta gccgccgcgc aaaccggcac aggcaaaacc gccgccttta tgctgcccag
      241 tctggaacgc ctcaaacgtt acgccaccgc cagcacctcg cccgcgatgc accccgtgcg
      301 tatgctcgtc cttaccccca cgcgcgaact tgccgaccaa atcgaccaaa acgtgcagtc
      361 ctacatcaaa aacctgccgc ttcgccacac cgtcttgttc ggcggtatga atatggacaa
      421 acagaccgcc gatttgcgcg ccggctgcga aatcgtcgtc gccaccgtcg gacggctgct
      481 cgaccatgtg aaacagaaaa acatcagttt aaacaaagtc gaaatcgtcg ttttggacga
      541 agccgaccgt atgctggata tggggtttat cgacgacatc cgcaaaatca tgcagatgct
      601 gccccgccaa cgccaaaccc tgctcttttc cgccaccttc tccgcaccga tacgcaaact
      661 ggcgcaagac ttcatgaacg cgcccgaaac cgtcgaggtt gccgcgcaaa acaccaccaa
      721 cgccaacgtc gaacaacaca tcatcgccgt cgataccttc caaaagcgca acctgctcga
      781 acggctgatt gtcgatttgc atatgaacca ggtcatcgtg ttctgcaaaa ccaaacaaag
      841 cgtcgaccgc gtaacgcgcg aactggtccg ccgcaacctg tccgcacagg cgatacacgg
      901 cgaccgttcc caacaaagcc ggctcgaaac actcaacgcc ttcaaagacg gcagcctgcg
      961 cgtcctcgtc gccaccgaca tcgccgcacg cggcctggac attgccgaac tgcccttcgt
     1021 catcaattac gaaatgcccg cccagcccga agactacgtc caccgcatcg ggcgcacggg
     1081 gcgcgcgggc gcggacggcg tggcgatttc cctgatggac gaatccgaac agaaaatgtt
     1141 tgaatccatt aaagagctga ccggcaacaa gctgctcatc gagcgcatcg agggcttcga
     1201 gccgcaatgg tgggaacagg gcggcgcaaa accggaaaaa cccgaaatgc gcgaaccgag
     1261 acaacgcaac cgctacgaat ccgccaaagc gcaacgcgaa aaaaacaccc ggccggaaaa
     1321 tgcggcaaac gatgcgggcg cggcttgcgg aaaaattgcc ggacgcagcc gccgaagccg
     1381 tcgggaacac cggacgtgcg ccctgctcca accgcgttac ggcgtaaaat aaccctgaaa
     1441 atcaaatgcc gtctgaacat ttcccgtttc agacggcatt tttcaaaccg gactgacgca
     1501 tcgggagcaa ccgcccgcac cggataaatt tcttccgcaa acagtttcag acggcatttg
     1561 ctgcctgtac aatatcattt ccttttccac tcaaaccatc aggatttccc aatgtccacc
     1621 caattcgatg tcgccgtaat cggcgcaggt ccggcaggct cggtcgcatc cgccctgctc
     1681 cgcaaaaaag gttatagtgg attaaatt
//
LOCUS       DAWGBY010000191         1592 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.191, whole genome shotgun sequence.
ACCESSION   DAWGBY010000191 DAWGBY010000000
VERSION     DAWGBY010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.191"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            41..139
                     /locus_tag="WHG62_002029"
     CDS             41..139
                     /locus_tag="WHG62_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ1726072.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(210..1586)
                     /locus_tag="WHG62_002030"
     CDS             complement(210..1586)
                     /locus_tag="WHG62_002030"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEZ1726073.1"
                     /translation="MHYIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDIYGS
                     LALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLERIRTQHILRLNGQEIRFIPDRD
                     LNILGNQVLPKHPNSLRFTAYASDGTVLNEQVYYSVGGGFVVTEENFDRQAETEKAVP
                     YPYTSCAELLARCRLNRLDISEVVLANEAALAGCGEAEIRRRVAGVADVMEGCIKRGL
                     AADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRVVTA
                     LTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGCQGE
                     VGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNGIAA
                     EKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKSTYKETSLAGLAATLRKKAVP
                     VSVRVVEC"
BASE COUNT          298 a          429 c          507 g          358 t
ORIGIN      
        1 tcttgccgga tgctgcaaac aacgccggtt tgcattcctg atggcggtgg ttttcttaga
       61 cgaacgcccg aacacgcagg aatggatagg cttggggctg gttacggcgg gcgtgttgac
      121 gctggcactg aaacggtaaa gccgcaagaa ataaatgaaa tgccgtctaa aaaactgttt
      181 tcagacggca ttttcgtttc tgtccatcct cagcactcga ccacgcgcac ggatacgggg
      241 acggcttttt tccggagcgt ggcggcgagt ccggcaagcg aggtttcttt gtaggtggac
      301 ttcatgtcgc gccctgtctg taacatggtt cggatgactt cgtcgagcga gacttttttg
      361 tccgtgccgt cttccaaaag cgcgagcgtg ccgagtttga gggctttttc ggcggcgatg
      421 ccgttgcgct cgatgcaggg gatttgcacc agtccgccga cggggtcgca agtcagcccc
      481 aaatggtgtt ccatcgccat ttcggcggcg ttttccactt gtttgggcgt gccgccgatg
      541 acttcggcgt atgcgcccgc cgccatcgaa cacgctacgc cgacttcgcc ctgacagccg
      601 acatccgcac cggaaatgga ggcgttggtc ttgtagagga tgccgattgc gcctgcggtg
      661 agcaggaagt tttcgacgcg ttcctgtgtg gcgtgcggat tgaacttgcg gaaatagtgc
      721 aatacggcgg gaatgatgcc tgccgcgccg ttggtcagtg cggtaacgac gcgtccgccg
      781 gcggcgtttt cttcgttgac cgccatggcg tacaccatcg gccagagctg ggtgttgacg
      841 atttcggttt cgcgcaggac tttgagcttg gcggcaagct gcggggcgcg gcggcggacg
      901 ttcaatccgc cgggcagctc gccgtctgcc gccaaaccgc gtttgatgca gccttccatc
      961 acatcggcaa cgccggcaac gcggcggcgg atttcggctt cgccgcatcc ggcaagcgcg
     1021 gcttcgtttg ccaacacgac ttcggagatg tcgagccggt tcagacggca tcgggcaagc
     1081 agttcggcgc aactggtata gggataggga acggcttttt ccgtttccgc ctgccggtca
     1141 aaattttctt cggtaacgac aaagccgccg ccgaccgaat aataaacctg ttcattcaat
     1201 accgtgccgt ctgaagcata ggcggtaaaa cgcaggctgt tggggtgttt gggcagcact
     1261 tgattgccga gtatgttcag gtcgcggtcg gggatgaagc ggatttcttg cccgttgagc
     1321 cggaggatgt gctgcgtgcg gatgcgttcg aggcgttcgg gaatgccggc aagcgggatg
     1381 tcgtgcggca ggctgccttc caaaccgagc atcagcgcgt caaatgtacc gtgtccgtat
     1441 ccggtcagtg cgagcgagcc gtaaatgtcg atgacgatgc gaacagcctg tgcatccaaa
     1501 cctgccgcaa aggcggcggc tgccttcatc gggccgaccg tatgcgaact ggaaggcccg
     1561 ataccgattt tgaaaatata gtggattaaa tt
//
LOCUS       DAWGBY010000192         1551 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.192, whole genome shotgun sequence.
ACCESSION   DAWGBY010000192 DAWGBY010000000
VERSION     DAWGBY010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.192"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..816
                     /locus_tag="WHG62_002031"
     CDS             <1..816
                     /locus_tag="WHG62_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ1726074.1"
                     /translation="PAPKNLLFSSLLFSSLLFSSLLFSSAAQAASEDSGRSPYYVQAD
                     LAYAAERITHDYPQATGANNTSTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASY
                     RKWNDNKYSVNTKEVLRNNSTGTENWQELKTENQENGSFHAASSLGLSAIYDFKLNDK
                     FDKFKPYIGARVAYGHVKHQVHSVETETTTVFSKPKGTTVPGIISEKPISKPPYHESN
                     SISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGSLENTRFKTHEVSLGVRYRF"
BASE COUNT          414 a          461 c          341 g          335 t
ORIGIN      
        1 ccagccccca aaaaccttct cttctcttct cttctcttct cttctcttct cttctcttct
       61 cttctcttct cttccgcagc gcaggcggca agtgaagaca gcgggcgcag cccgtattat
      121 gtgcaggcgg atttagccta cgccgccgaa cgcattaccc acgattatcc gcaagcaacc
      181 ggtgcaaaca acacaagcac agtaagcgat tatttcagaa acatccgtgc gcattccatc
      241 caccctcgtg tgtcggtcgg ctacgacttc ggcggctgga gaatagcggc agattatgcc
      301 agttacagaa aatggaacga caataaatat tccgtcaaca caaaagaggt gctaagaaac
      361 aatagcactg gcactgaaaa ctggcaagaa ctgaagacgg aaaatcagga aaacggcagc
      421 ttccacgccg cttcttctct cggcttatcc gccatttacg atttcaaact caacgataaa
      481 ttcgataaat tcaaacccta tatcggcgcg cgcgtcgcct acggacacgt taaacatcag
      541 gttcattcgg tggaaacaga aaccacgact gttttcagta aaccaaaagg cactacagtg
      601 ccaggcatta tctcagaaaa accgattagc aaacctccct atcacgaaag caacagcatc
      661 agcagcttgg gtcttggtgt catcgccggt gtcggtttcg acatcacacc caagctgacc
      721 ttggacaccg gataccgcta ccacaactgg ggaagcttgg aaaacacccg attcaaaacc
      781 cacgaagtct cattgggcgt gcgctaccgc ttctgattcc ccgataccga tgccgtctga
      841 accttcagac ggcatttttg atgcacctgc cgtttacaga cgcggggcgg gcgtgggaat
      901 acccgaaccg tcattcccga caacaccgta atctcgaaat ttgtcattcc cgacaacacc
      961 gcaatctcga aattcgtcat tcccgcgcag gcgggaatcc agacccctga cgcggtggga
     1021 atctatcgga aatgactgaa acccccgaga ttctagattc ccactttcgt gggaatgacg
     1081 tggtgcaggt ttccgtatgg atggattcgt cattcccgcg caggcgggaa tccagacccc
     1141 tgacgcggcg ggaatctatc ggaaatgact gaaaccccga gattctagat tcccacttcc
     1201 gagggaatga cggttcagtt gcgttccgac aacaccgtaa tctcgaaatt cgtcattccc
     1261 gataacagcg caatcttgaa acccgtcatt cccgacaaca ccgtaatctc gaaattcgtc
     1321 attcccgcgc aggcgggaat ccagccccct gacgcggcgg gaatctatcg gaaatgactg
     1381 aaaccccgcg ttctagattc ccacttccgt gggaatgacg gttcagttgc gctccgacaa
     1441 caccgtaatc tcaaaacccg tccgacaaca ccgcaatctt gaaattcgtc attcccgcac
     1501 aggcgggaat ccagacctgt ccgcacagaa acttatcgga taaaaacagt t
//
LOCUS       DAWGBY010000193         1540 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.193, whole genome shotgun sequence.
ACCESSION   DAWGBY010000193 DAWGBY010000000
VERSION     DAWGBY010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.193"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            126..1463
                     /locus_tag="WHG62_002032"
     CDS             126..1463
                     /locus_tag="WHG62_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ1726075.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTILVALPVQLAEFYIGRTGGKNAVDSFRALRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIAATIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYVISAVIMPVGALGVA
                     VFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLDIL"
BASE COUNT          281 a          370 c          411 g          478 t
ORIGIN      
        1 attctctaag gtgctcaagc accaagtgaa tcggttccgt actatctgta ctgtctgcgg
       61 cttcgtcgcc ttgtcctgat ttttgttaat ccactatact atcttcacat ttcttaataa
      121 attttatgag taaccatact tcttggtcgt ccaaaatcgg tttcgtgctt gctgcggcgg
      181 gttcggccat cggtttgggc gcgatttgga aattccctta tacggcgggc accaacggcg
      241 gcgcggtgtt tttcctgctg tttttgatat ttactatctt ggtcgccctg cccgttcagc
      301 ttgccgaatt ttatatcggg cgcacgggcg gtaaaaatgc cgtcgattcc ttcagggctc
      361 tgcgtccggg tacgcaatgg ctttgggtcg ggcgcatggg cgttgccgcc tgctttattt
      421 tgctgtcgtt ttacagcgtg gtcggcggat gggtattgaa ttatgtcgtc cacagtttta
      481 caggggcaat ccatgcggga gcggactttg aagccctgtt cggcacaacg atttccaatc
      541 cggcaggttc gctgtcctat caggcactgt ttatgctgat tacggtttgg gtggtcaaag
      601 gcgggatttc agacggcatc gaaaaggcaa accgttatct gatgccgggg ctgtttatcc
      661 tctttattgc gctggcaatc cgttcgctga cgctgccggg tgcaatggag ggcgtgtctt
      721 tcctgctcaa accgaattgg tcgtacttta aagccgatac gatgattacg gctttaggcc
      781 aggcgttttt tgccctgagc atcggcgttt ccgccatgat tacctacgct tcatatttgg
      841 gaaaagatca ggatatgttc cgctcggggc atacgattat gtggatgaac ctcttggttt
      901 cgctgttggc aggtttggtg atttttccgg cggtgttcgc cttcggtttt gaaccgagcc
      961 aggggccggg attgattttt atcgtattgc cggcggtgtt tatgaaaatg ccgttcggta
     1021 cggttttgtt tgcggtattt atgctgctgg tcgttttcgc cacgctgact tcggcatttt
     1081 cgatgttgga aacggtcatc gccgcaacca tccgccaaga cgagcgcaaa cgcaaaaaac
     1141 acacttggct tatcggcacg gccattttca ttgtcggcat cccatccgcg ctgtctttcg
     1201 gcgtatgggg tgagtttaag gttttcggca aaaccatttt tgatttgtgg gactatgtta
     1261 tttccgccgt cattatgcct gtcggcgcgt tgggcgttgc cgtatttacc gcctggattc
     1321 aggacaagca gtctgtgtta aaagatgccg gcgcgggcag caccgtacca cgggcagtgc
     1381 tgctgctgtg gctgaatacc ttgcgctacc ttgccccgat tgccattatt attgttttcg
     1441 tcaattcttt ggacatcctt taaaagccat ccaaacagca aaaatgccgt ctgaaagcct
     1501 ttcagacggc atttttgctt caggttcagc ctatttcgtt
//
LOCUS       DAWGBY010000194         1473 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.194, whole genome shotgun sequence.
ACCESSION   DAWGBY010000194 DAWGBY010000000
VERSION     DAWGBY010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.194"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            184..396
                     /locus_tag="WHG62_002033"
     CDS             184..396
                     /locus_tag="WHG62_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726076.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            693..848
                     /locus_tag="WHG62_002034"
     CDS             693..848
                     /locus_tag="WHG62_002034"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ1726077.1"
                     /translation="MSERKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            complement(938..1387)
                     /locus_tag="WHG62_002035"
     CDS             complement(938..1387)
                     /locus_tag="WHG62_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ1726078.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT          472 a          354 c          222 g          425 t
ORIGIN      
        1 ttttgcaaag gtctcagtct ttttaaacca cagcccttcc caactaaacc aaaaggtcgt
       61 ctgaacccta ttttcagacg accttttgcc actttgtaaa acaaatcttc ccaccatcct
      121 ctccccaaac atcgcccgaa ccagtaaact tctcatattt caacaacttc ttggaagcaa
      181 accatgcccc atatccaccc gctccacctg ttcccgcccc atatcgccga acgcggactg
      241 ctctattttc agcagggcaa agttggtgct gtccaaaaaa cttccaccgg gcgttatcgg
      301 gcggaggtat gcggtttgga aaactattgg gtatggctga agctggatag tgatttgtat
      361 attaaagacg aaagctgcga ttgcccttat gtctaaaggt gcaaacatac cttaaattac
      421 tatattacat aggcaaaata caagcctata acgaattgga aacaaaatgc cgtctgaaag
      481 cattataaaa tctgttcacc ttttcagatg agtaatgtac acccctatac aatttttgct
      541 actatacccc ataaatccac ggctaaagat atccttatta tgtcctatga tttatcgaaa
      601 cgacttgtaa tcggcttagc atcaagtgcc ctattcgact tatccgaatc ggataatata
      661 tttagaatgg aaggggcaga aacctatagg caatatcaga gagaaaaaca aaaccatccc
      721 ctaaaaaagg cgttgtcttt ccatttatta aaaaacttct gtcaatcaat gaaataaacc
      781 caaacgaccc aacgattggg tttattcttt tatccagaaa caatccagat acagattacg
      841 agtcataact ataggcttaa tattacacga ttttcattcc atcaaggcgg aaaaccgcac
      901 aaatactgaa acactatcga tcgatttgta aacaagccta cttaagtaac ttgcagtcct
      961 tatcatttcc tttaaaataa tccagcccgt cactacacga actggcggac ttcttgcaaa
     1021 taaaggttac tagattttca ttcatcttaa taataaaagg atttttatct ttatctatgg
     1081 ctaccgcctt caacatgaat ttactgtcta aggccccgcg cgcgattcca ttcaaacgga
     1141 tacaaaagcc ttctgcctct ttaatcggca aacttggcca tttggtagat gtttgtttaa
     1201 atctcccatt ctgcagataa aacttttcca taaaatgtgc attttctaac aaggctgccc
     1261 gcactgcatt tatctttgct ttctcaacat aattgcgata gctcggataa acaattaaag
     1321 caagtacaga caatatcaag accactgata ttaattcaac cagcgtaaac ccccgattat
     1381 cagtcattac tttacttcca ataagaacag attattcaac atatttcttt gaacagactt
     1441 actatcccat tcagcagtat gcatatttcc cac
//
LOCUS       DAWGBY010000195         1437 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.195, whole genome shotgun sequence.
ACCESSION   DAWGBY010000195 DAWGBY010000000
VERSION     DAWGBY010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.195"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(617..1342)
                     /locus_tag="WHG62_002036"
     CDS             complement(617..1342)
                     /locus_tag="WHG62_002036"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ1726079.1"
                     /translation="MPRFHLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAARLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          293 a          323 c          426 g          395 t
ORIGIN      
        1 ttcagtcatt tccgataaat caccgcaacg ttaaatttct agattcccgc ctgcgcggga
       61 atgacggcgg agagggtttg ttgtttcgga taaatccctg tagtttttcg tttctagatt
      121 cccgcttttg cgggaatgac ggcggcggga tttctgtttt tccgacaaat tcctaaaact
      181 taaaatttcg ttatttccgc gagaacagaa aaccaaaaac agaaacctaa aatctcgtca
      241 ttcccgcaaa aacagaaaac caaaaaacag caacctaaaa ttcgtcattc ccgctcaggc
      301 gggaatccag tccgttgagt ttcagtcatt tccgataaat caccgcaacg ttaaatttct
      361 agattcccgc tttcgtggga atgacggcgg agagggtttg ttgtttcgga taaatccctg
      421 tagtttttcg tttctagatt cccgcttttg cgggaatgat ggcggagagg gtttgttgtt
      481 tcggataaat ccctgtagtt tttcgtttct agattcccgc tttcgcggga atgacgacac
      541 gggaaatctt atttgaacct actatcttaa tcggctgcaa aatgccgtct gaacgggttt
      601 cagacggcat ttctgtttat gcgaaatcgc cccaaagcgt ctgcatggcg gcgagggcgg
      661 cgagtggggc ggtttctgtg cgtaaaatcc gtttgccgag tgtaaccgcc tgaaagccag
      721 cttcaaatgc ctgttgttct tcctgttctg tccagccgcc ttcgggcccg accataaaga
      781 cgattgcgcc ggacgggtgg cggatgtcgc cgagtttgcg ggcgcggttg atgctcataa
      841 tcagcttggt gctttcagac ggcattttgt cgagtgcttc acgatagccg atgatgggca
      901 gcacgggggg aacggtgttc ctgccgcttt gttcgcacgc ggagatgacg atttcctgcc
      961 agcgtgcgag gcgtttggcg gcgcgttccc catcgaggcg gacgatgcag cgttcgctga
     1021 tgacgggctg tatggcggtt acgccgagtt cgacgctttt ttgcagggtg aaatccatgc
     1081 gatcgccgga ggagatggat tgtatcagtg tgatgttgag cggggactcg ttgtcggttg
     1141 tgtcttcgtg caggatttcg gcttcggcgc ggcgtttttc caaaacggtc agccgtgcgg
     1201 cgtgtgcctt gcctttgccg tcgaagaggg tgatgttttc gttggggcgg acgcgcagga
     1261 cgttgaggtg gcggacgatg ttgtcgggca gggcgacggt ttgtccgacg gaaaggtttt
     1321 cgggcaggtg gaatcggggc atagtttttg gcggttcgga cggttataat ctgtcgcagc
     1381 ggcgtgatgg aaacggacat tatagtggat taaatttaaa ccagtacagc gttgcct
//
LOCUS       DAWGBY010000196         1408 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.196, whole genome shotgun sequence.
ACCESSION   DAWGBY010000196 DAWGBY010000000
VERSION     DAWGBY010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.196"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(41..1039)
                     /gene="porB"
                     /locus_tag="WHG62_002037"
     CDS             complement(41..1039)
                     /gene="porB"
                     /locus_tag="WHG62_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HEZ1726080.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSVAHNGAQA
                     ASVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIVGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFVQYGGAYKRHHQVQEGLNIEKYQIHRLVS
                     GYDNDALYASVAVQQQDAKLALPNDNSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGL
                     VDSADLSNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGENKFVSTAGGVGLRHKF"
BASE COUNT          325 a          322 c          366 g          395 t
ORIGIN      
        1 gtctgacgac aggctttttg ttgataccaa tctttgcaga ttagaatttg tggcgcagac
       61 cgacaccgcc ggcagtcgat acgaatttgt tttcgccttt accttcttgc aaccaaccgg
      121 cagaaaccaa ggcagaagtg cgtttggaga agtcgtattc cgcaccgaca accacttggt
      181 cgtaatcgtt gcttaagtct gcactatcaa ccaaaccttt gaagccgtgg gcgtaagaaa
      241 cgcggggcgt tacgttgccg aagcggtatg ccaaggtagc ggcaacttcg gtttgagagt
      301 tgtgcgaatt gtcgtttggc aaagccaatt tcgcgtcttg ttgctgtacg gctacggaag
      361 cgtacagggc atcattgtcg taaccgctga ccaaacggtg aatctggtat ttctcaatat
      421 tcaagccctc ttgcacttga tgatgtcttt tataggcacc gccatattgc acgaagaagc
      481 caccgttttt gtagttgaag ccggcgtggt aagattcgct gttatgtctg cctgcattgt
      541 cgttaagcgc gtattgtacg ctgccgctga ggccggcaaa ttcgggagaa tcgtagcgta
      601 cggaaatgag gcgtgcttcg ggttcggcaa ttttgtttac acccaaatag tcgcttttgc
      661 tatcccaagg attgatgtcg ccggtgtctt tcaggacgct gttcaaacgg ccgacgcgca
      721 atttaccgaa gccgcctttc aaaccgatga aggattggcg gttgccccaa ccggagtcag
      781 taccgacgat agatgccttt tgctcaacct gccaaatggc tttcagaccg ttaccgaggt
      841 cttcttggcc tttgaagccg attttcgaac ccaaatcaac gatgccggta ccggtttcaa
      901 cgctagccgc ctgagctcca ttgtgagcta cggagcggga agtttctacg ccggctttga
      961 tggtgccgta cagggtaacg tcagccattg ctgcaacagg aagggctgcc aaagtcaggg
     1021 caatcaggga ttttttcatt gctgtattcc ttttttggtt aagaaattta agcaggccgg
     1081 gctttccaag ccgcttagtt ttgcatttac cgccgacgtt ttcggcgatt ccatgtctga
     1141 aactatagat gttcctgtct gaaaaaacaa acttctgcct gtttttgtgt ggaattcgat
     1201 gtgtattttg aagggcggat agagatatta taggtatttt ttgttttata acatatggtt
     1261 atttaaattt tttaagattt gcatttttac aacacttact cgggagggta ttggagggca
     1321 ttgcaaaccg ggggttataa agacggcaaa aacgcgcacg cggtttcttt cggaacgggc
     1381 ggatgcaaaa cccgcccctg cggcagga
//
LOCUS       DAWGBY010000197         1374 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.197, whole genome shotgun sequence.
ACCESSION   DAWGBY010000197 DAWGBY010000000
VERSION     DAWGBY010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.197"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="WHG62_002038"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="WHG62_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ1726081.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT          369 a          401 c          299 g          305 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggcccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgatcgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtttgg gtatgtggga caaaattccc gaaaacgaaa tctacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 tgaagcgcgc ggcgaacctg ccgactgttt gggctatctg atttccaacc acaatatccg
      541 ccgcgccgcc tatgaagtcg tatcacaact cgacaatgtc agcattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgcttc tcgcaaaccc gtcgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggcggcaagc gtaaaagaac aactcaaggg
      961 taggcttggc gacatggaac tggtcagcag catccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggca aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttacc gcacacggtt tcaacttggg tctgtccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc acgcccatcc gctttatcac gggaccaata tgatgctgaa
     1261 actgtttacc aacgaaaccg cgccggcaaa actgctgcgc ggtttggtat tgcgtgccgg
     1321 caacaacttc ccgccgctga aaaagctgat taccaaacaa ctgaccggtt gaaa
//
LOCUS       DAWGBY010000198         1366 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.198, whole genome shotgun sequence.
ACCESSION   DAWGBY010000198 DAWGBY010000000
VERSION     DAWGBY010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.198"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            166..1278
                     /gene="nadA"
                     /locus_tag="WHG62_002039"
     CDS             166..1278
                     /gene="nadA"
                     /locus_tag="WHG62_002039"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ1726082.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEASTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPEAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSHPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGHNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
BASE COUNT          339 a          358 c          394 g          275 t
ORIGIN      
        1 accaaagcgg tttgtcggaa cgaagcgggt cggttttacg gtatcgcaaa cctgttttca
       61 gacgaccttg cttattatac tcaatttgag cataatataa aaatatttca aaatataaac
      121 ggcaaatctt tatgccgtct gaaaaaccag ccataaggaa gtctcatgca aaccgccgcc
      181 cgccgctcgt tcgattacga tatgcccctc atccaaaccc cgacttccgc ctgccaaatc
      241 cgtcaggcgt gggcgaaggt tgccgacacg cccgaccgcg agacggcagg ccgtctgaaa
      301 gacgaaatca aggctttgct gaaggagaaa aacgcggtct tggtggcgca ttattacgtc
      361 gatccgctga ttcaggattt ggctttagaa acgggcggat gcgtgggcga ttcgctggaa
      421 atggcgcgct tcggcgcgga acacgaagct agtacattgg tggtggcggg tgtgcgcttc
      481 atgggcgaga gcgcgaaaat cctctgccct gaaaaaacag tgctgatgcc tgatttggag
      541 gcggaatgtt ctttggattt gggctgtccg gaagaagcgt tttcagcgtt ttgcgaccaa
      601 caccccgacc gcacggtcgt agtgtacgcc aacacttccg ccgccgtgaa agcgcgtgcc
      661 gattgggtgg taacgtcttc ggtggcgttg gaaatcgtat cgtatttgaa atcgcgcggc
      721 gagaagctga tttggggacc tgaccgccac ctcggcgact acatccgccg cgaaacgggc
      781 gcggatatgc tgctgtggca gggttcgtgc atcgtccaca acgaattcaa agggcaggag
      841 ctggcggcgt tgaaggcgga acaccccgaa gcggtggtgc tggttcatcc cgaatcgcca
      901 caaagcgtca tcgaactggg cgacgtggtc ggctcgacca gcaaactgct caaagccgcc
      961 gtatcgcacc ctgaaaaaaa attcatcgta gcgaccgact tgggcatcct gcacgaaatg
     1021 caaaagcagg cacccgacaa agaatttatc gccgcaccga cggcgggcaa cggtggaagc
     1081 tgtaaaagct gcgcgttctg cccttggatg gcgatgaatt cgctgggcgg catcaaatac
     1141 gccctgacaa gcggacacaa cgaaatcctg ttggacagga agctgggcga agccgccaaa
     1201 ctgcctttgc agcgtatgct cgacttcgcg gcaggactca agcgcgggga tgtgttcaac
     1261 ggcatgggac ccgcctgatt tgccgtccat attatagtgg attaacaaaa atcaggacaa
     1321 ggcgacgaag ccgcagacag tacaaatagt acggaaccga ttcact
//
LOCUS       DAWGBY010000199         1344 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.199, whole genome shotgun sequence.
ACCESSION   DAWGBY010000199 DAWGBY010000000
VERSION     DAWGBY010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.199"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..>1344
                     /locus_tag="WHG62_002040"
     CDS             <1..>1344
                     /locus_tag="WHG62_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ1726083.1"
                     /translation="DHTNNGIRTATGWVSADDGLLVRDLNGNGIIDNGAELFGDNTKL
                     ADGSFAKHGYAALAELDLNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEELG
                     IQSLDLAYKDVNKNLGNGNTLAQQGSYTKTNGTTAKMGDLLLAADNLHSRFKDKVELT
                     AEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSAAETKEAQLALLDNLIHKWAET
                     DSNWGKKSPMRLSTDWTQTANEGIALTPSQVAQLKKNALVSLSDKAKAAIDAARDRIA
                     VLDAYTGQDSNTLYYMSEEDALNIVKVTNDTYDHLAKNIYQNLLFQTRLQPYLNQISF
                     KMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEMLAYGELRSWYEGRRLMADYVEE
                     AKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNVGFGHNKNVSLYGNDGNDTL"
BASE COUNT          408 a          316 c          302 g          318 t
ORIGIN      
        1 tgatcacacc aacaacggta tccgcaccgc caccggttgg gtttctgccg atgacggttt
       61 actcgtccgc gatttgaacg gcaacggcat catcgacaac ggtgcggaac tcttcggcga
      121 caacaccaaa ctggcagacg gctcttttgc caaacacggc tatgcagctt tggccgaatt
      181 ggatttaaac ggcgacaaca tcatcaacgc ggcagacgcc gcattccaaa ccctgcgtgt
      241 atggcaggat ctcaaccaag acggcatttc ccaagctaat gaattgcgta cccttgaaga
      301 attgggtatc caatctttgg atctcgccta taaagatgta aataaaaatc tcggtaacgg
      361 taacactttg gctcagcaag gcagctacac caaaacaaac ggtacaaccg caaaaatggg
      421 ggatttactt ttagcagccg acaatctgca cagccgtttt aaagataaag tggaactcac
      481 tgccgaacag gcaaaagccg ccaatcttgc gggcattggt cgtctgcgcg atttgcgcga
      541 agctgccgca ttgtccggcg atttggccaa tatgctgaaa gcttattctg ccgccgaaac
      601 taaagaagca cagttggcat tgttagataa tttgattcac aaatgggcgg aaaccgattc
      661 gaactggggc aaaaaatcgc caatgcgact ttcaaccgat tggacgcaaa cggctaatga
      721 aggtattgca ctgacaccat cccaagtagc acaactaaaa aagaacgctt tagtttccct
      781 ttctgataaa gctaaagcag ctattgacgc cgcccgcgac cgcattgccg tgcttgatgc
      841 ctacacgggg caggattcca acacactcta ttacatgagc gaggaagatg cgcttaatat
      901 cgtcaaagta accaacgata catacgacca tctcgccaaa aacatctacc aaaacctgtt
      961 attccaaacc cgtttgcagc catatttgaa tcaaatcagt ttcaaaatgg aaaatgatac
     1021 gttcactttg gattttagtg gtcttgttca agcatttaac catgtcaaag aaactaatcc
     1081 gcaaaaagct tttgtggatt tggccgagat gcttgcatat ggcgaacttc gttcttggta
     1141 tgaaggccga agactaatgg ccgattatgt ggaggaggca aaaaaagcag gtaaatttga
     1201 agattaccag aaagtgttgg gtcaggagac cgttgcatta ttagctaaaa catcgggtac
     1261 gcaagcagat gatatcctgc aaaatgtagg ctttggtcat aataaaaatg tttctttata
     1321 tggtaatgac ggcaacgaca ctct
//
LOCUS       DAWGBY010000200         1252 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.200, whole genome shotgun sequence.
ACCESSION   DAWGBY010000200 DAWGBY010000000
VERSION     DAWGBY010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.200"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            235..1188
                     /locus_tag="WHG62_002041"
     CDS             235..1188
                     /locus_tag="WHG62_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ1726084.1"
                     /translation="MGFLIGLSRNLTRFTALVILLASAVAFIGPTSFAWVKGDVQVLV
                     LGIIMLGMGMTLGREDYRILAQRPLDVFIGAAAQYTVMPLLAIGIAKLFDLSLGLTLG
                     LVLVGTCPGGVSSNIMSFLAKGDVAFSVGMTTVSTVLAPAVTPLWMTCLVGQTVDMDG
                     WGMFRFMLLVTLLPVVLGSAANILLHGKHWFENVRAVMPGVAVLAFACIVGGVASVHG
                     HRFAESALVMVLAIAVHNIAGYVSGYYAAALFGMDTAKKRTLAIEVGVQNAGLATGLS
                     AKFFPGNAESAVAAAVACVWHSVSGTVLGNLFALWDKRRDA"
BASE COUNT          196 a          270 c          436 g          350 t
ORIGIN      
        1 accggatgat tcgggctaaa taattcctga ttctttggat atagccaacg gtatgcctgc
       61 cgatgccgtc agaaagggct tgatgggcgt ttgcggttcg ggttaatatt tgtgctgtat
      121 ctgttaattc cggttagtaa aatgggggcg gggacgatga gtggccgtcg accggttttg
      181 cacgggcggt aataatgtcc ggcgcaaggt gcgccgtttc gggaggggtg tgtgatgggt
      241 tttctgattg gtttgagccg caacctgacg cggtttacgg ctttggtcat tttgcttgcg
      301 tcggcggttg cgtttatcgg accgacttcg tttgcgtggg ttaagggcga tgttcaggtc
      361 ttggtgctgg gcatcattat gctgggtatg gggatgactt tgggcaggga ggactaccgg
      421 attttggcgc agcgtccttt ggatgtgttt atcggtgcgg cggcgcaata taccgtgatg
      481 ccgttgctcg ccatcggtat tgccaagctg ttcgaccttt cgctggggct gactttgggg
      541 ctggtgttgg tggggacgtg tccgggcggc gtgtcgtcca acattatgag tttccttgcc
      601 aaaggcgatg tggcgttttc agtcggtatg acgacggtgt ctacggtgct ggctccggcc
      661 gttacgcctt tgtggatgac ctgcctggtc ggtcagacgg tggatatgga cggttggggg
      721 atgttccggt ttatgctgct ggtcacgctt ttgccggtgg tgctgggttc ggcggcaaat
      781 atcctgctgc acggaaaaca ttggtttgaa aatgtccgtg ccgttatgcc gggcgtggcg
      841 gtattggcgt ttgcctgcat tgtcggcggc gtggcttcgg ttcacgggca ccgttttgcc
      901 gaatcggcgt tggtaatggt gttggcgatt gcggtacaca atatcgccgg ctatgtgtca
      961 ggctattacg ccgccgcgct gtttggtatg gatacggcaa aaaaacgcac cttggcaatc
     1021 gaagtcggcg tgcagaatgc cggtttggca acgggattga gcgcgaaatt ttttccgggc
     1081 aacgccgaat cggcggttgc ggcggcggtc gcctgcgtgt ggcattcggt ttcggggacg
     1141 gtattgggca acttgttcgc tctgtgggac aagcgtcggg acgcttagtc gggcgtgtcc
     1201 gaaccgtccc acgatatata gtggattaac tttaaaccgg tacggcgttg cc
//
LOCUS       DAWGBY010000201         1233 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.201, whole genome shotgun sequence.
ACCESSION   DAWGBY010000201 DAWGBY010000000
VERSION     DAWGBY010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.201"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            23..1126
                     /locus_tag="WHG62_002042"
     CDS             23..1126
                     /locus_tag="WHG62_002042"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ1726085.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPHAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
BASE COUNT          281 a          340 c          341 g          271 t
ORIGIN      
        1 aaaccgattt aaaggagcga acatgttgat tttacaagcc gagcgcgaca gcctgctcaa
       61 gccgctgcaa gccgttaccg gcatcgtcga acgccgccac accctgccca tcctgtccaa
      121 cgtcctgatt gagggaaaag gcggtcagac caaactcttg gcaaccgatt tggaaatcca
      181 aatcgacact gcgggtcccg agggcggcgc gggcgacttc cgcatcacta ccaatgccaa
      241 gaaatttcag gacattttgc gcgcgctgcc tgccggtgcg ctggtgtcgc tggattggga
      301 cgacagccgt ctgacgctga aggcgggcaa atcgcgtttt gccctgcaga ccctgcctgc
      361 cgccgatttt ccgatgatga atgtcggcga ggacatcagc gcgactttct cgctggagca
      421 ggagcgtttc aaaaccatgc tgtcgcaagt gcagtacagc atggcggtgc aggacatccg
      481 ctattatctc aacggtctgc tgatgcaggt tgagggcagc cagttgcgcc ttgtggcgac
      541 cgacggacac cgccttgcct atgcagcctg cgcgattgat gcggatttgc cgcacgccga
      601 agtgattttg ccgcgcaaaa cggtgctgga actgttcaaa ctgttgaaca accccgacga
      661 tccgattcaa atcgagctgc tggacaaaca ggtgcgtttc caatgcaacg gcacgaccat
      721 cgtcagcaag gtcatcgacg gcaaattccc cgatttcaac cgcgtgattc ctttggacaa
      781 cgacaagatt ttcgttttgt cccgtgccga acttttgggt gcgctggaac gtgtgtccat
      841 tcttgccaac gaaaaattcc gtggcgcgcg cctgttcctg caatccggcc tgttgagcgt
      901 cgtgtgcagc aacaacgagc aggaagaagc gcgcgaagaa atcgaaatcg cctatcaggg
      961 tggcgaactc gaagtcggtt tcaatatcgg ctatctgatg gacgtgttgc gcaacatcca
     1021 ttccgacgat atgcagcttg ccttcggcga tgccaaccgc tcgacgctgt ttaccgtgcc
     1081 gaacaatccg aatttcaaat atattgtgat gccgatgcgg atttgacggt tttccggaac
     1141 acgatgcccg tattggagat ataccccgaa ccgtgcagac ggattcgggg ttttgttcgg
     1201 ctgtcggaaa ggtatagtgg attaacaaaa acc
//
LOCUS       DAWGBY010000202         1232 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.202, whole genome shotgun sequence.
ACCESSION   DAWGBY010000202 DAWGBY010000000
VERSION     DAWGBY010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.202"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            41..373
                     /locus_tag="WHG62_002043"
     CDS             41..373
                     /locus_tag="WHG62_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ1726086.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            704..1213
                     /locus_tag="WHG62_002044"
     CDS             704..1213
                     /locus_tag="WHG62_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ1726087.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT          327 a          232 c          295 g          378 t
ORIGIN      
        1 gccttgtttt gacggaaaac catcatataa aggaacactt atgcagattt tatcttttca
       61 gccggacatt gcggaacgta tgctggaagg tacggaaggc gagtcggtca acgaaaacgc
      121 acaattcgtc cgtacggaca acggctattg gattgcgtgg catgaaggcg tagcggcact
      181 gcttgcgccc gatacgccgc cgggcattcc ctgtttttgg gtggaaggcg cggaaagcct
      241 tgaagagttg tgcgtcatgg tggaacgcgg cgagtttgac gaagtggaag agtttgacgg
      301 cgatgacgac gaatggctcg aaacggcaca gggttgcggg caccacggcg acgcttgcgc
      361 ctgcggacat taaaggcatt gcaggcttgc cgcaaggggg caaggctttg ccgtttttta
      421 aataatcggt ggattgcatc tgtttgcaat gggctgaacg cttccctttg tattttattg
      481 aataaaaaaa cttatcttgg tattataatt aaggcagcat caattatttt gggatggcaa
      541 taaacgcaaa gcattgattt gcgccgattg cagacttatt atagcaggtt gcggcgcgga
      601 cttaatggga attgtttata gagcatgatg gtctgaaaca tcattaatta aaaataccat
      661 taatccgatt tatatttatt tcaatttcaa tggaaaaaca tcaatgacaa tgattttaag
      721 cattttaagc ctgtttttta tcatcagact gttattttta gccgtctcta ttaaacatga
      781 aaaagccttg attgccaaag gggcgaaaca atacggaaaa accaattcca cgctgcttgc
      841 ggcagttcat acgctttatt atttggcgtg ttttgtttgg gtatggcttt ctgacactgc
      901 ttttaatggc atatccttga ttggtacgct gacggtgatg gcttcgtttg tgatattgtc
      961 attgattatt aagcagttgg gggagatttg gacggttaaa atctatattt taccaaatca
     1021 tcaaattaat cgttcgtggt tgtttaaaac attccgccac cccaattatt ttttaaacat
     1081 catacccgaa ctgattggca tcgccttatt atgtcaagcg tggtatgttt tattgattgg
     1141 cctgcccatt tatttgctgg tcttatttaa gcgtatccga caagaagaac aggcgatggc
     1201 aacacttttt taacccgttt catcaattat ag
//
LOCUS       DAWGBY010000203         1154 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.203, whole genome shotgun sequence.
ACCESSION   DAWGBY010000203 DAWGBY010000000
VERSION     DAWGBY010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.203"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..534
                     /locus_tag="WHG62_002045"
     CDS             <1..534
                     /locus_tag="WHG62_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ1726088.1"
                     /translation="NDITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLF
                     LSSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPASFDKKQGVRWGNILSVNTQMIRFR
                     SDCIYKGIEENRNKVSKEMVLALDYLVNVIKNASDIQEFSAQDDGLIIIDNVNGLHAR
                     TDYTDKNRHYIRARITV"
     gene            544..>1154
                     /locus_tag="WHG62_002046"
     CDS             544..>1154
                     /locus_tag="WHG62_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ1726089.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFIMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLIPPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYG"
BASE COUNT          380 a          167 c          229 g          378 t
ORIGIN      
        1 aatgatataa ctttctcgga agatgttgga gaatgtccac ttcatagtga ttcatctttt
       61 agtgaaaacc cggaaagtta tttggttatg tatgtagtaa aatcagccaa tgatggaggt
      121 aattccctat ttttaagttc atcagatatt gtcaatcagt tatctaaaac agaaaccggt
      181 aaaaaacact taaaaacatt aacgggcaat ttatatccat ttaaaacacc agcatcattt
      241 gataaaaaac aaggtgtgag atggggtaat atcttatcgg tcaatactca aatgattaga
      301 tttagaagtg attgtatcta taaaggtatt gaagaaaata gaaataaagt atcaaaggaa
      361 atggtacttg cacttgatta tcttgtaaat gttataaaaa atgcgagtga tattcaagaa
      421 ttttctgcac aagatgatgg tttgattatt attgacaatg tcaatggctt gcatgccaga
      481 actgattata cggataaaaa caggcattat attagagcaa gaattactgt ataaaggacg
      541 gttatgcaag aaataatgca atctatcgtt tttgttgctg ccgcaatact gcacggaatt
      601 acaggcatgg gatttccgat gctcggtaca accgcattgg cttttatcat gccattgtct
      661 aaggttgttg ccttggtggc attaccaagc ctgttaatga gcttgttggt tctatgcagc
      721 aataacaaaa agggtttttg gcaagagatt gtttattatt taaaaaccta taaattgctt
      781 gctatcggca gcgtcgttgg cagcattttg ggggtgaagt tgcttttgat acctccagtg
      841 tcttggctgc ttttactgat ggcaatcatt acattgtatt attctgtcaa tggtatttta
      901 aatgtatgtg caaaagcaaa aaatattcaa gtagttgcca ataataagaa tatggttctt
      961 tttgggtttt tggcaggcat catcggcggt tcaaccaatg ccatgtctcc catattgtta
     1021 atatttttgc ttagcgaaac agaaaataaa aatcgtatcg taaaatcaag caatctatgc
     1081 tatcttttgg cgaaaattgt tcaaatatat atgctaagag accagtattg gttattaaat
     1141 aagagtgaat acgg
//
LOCUS       DAWGBY010000204         1120 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.204, whole genome shotgun sequence.
ACCESSION   DAWGBY010000204 DAWGBY010000000
VERSION     DAWGBY010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.204"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            144..>1120
                     /gene="dusB"
                     /locus_tag="WHG62_002047"
     CDS             144..>1120
                     /gene="dusB"
                     /locus_tag="WHG62_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ1726090.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCREFGAGWAVCEMLTS
                     DPTLRNTRKTLHRSDFVDEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVRAAGVPVTLKTRLGWHEDHQNLPVIAKIAED
                     CGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAAAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECAAAILNHIRAIHAFYGDSAGV
                     RIARKHIGWYIGEMPDGEQARREINRLDSAAAQYDMLAGYLERLAGKTDR"
BASE COUNT          259 a          340 c          315 g          206 t
ORIGIN      
        1 ccgcctgtga gtggcggggc aggaaatctg tgtgcggatt atgccataaa acggtgcccg
       61 ccccaatcgc gggcgcgtcc ggagattgga aatcctgctt aaaaaatgta caatgtcgca
      121 cttttttgaa acgcggaccc attatgcaca tcggcggcta ttttatcgac aaccccatcg
      181 cacttgcgcc gatggcgggc attaccgaca aacccttccg ccgcctttgc cgcgagtttg
      241 gcgcgggttg ggcagtgtgc gaaatgctga ccagcgaccc gacgctcaga aatactagaa
      301 aaaccttgca ccgcagcgat tttgtcgatg aaggcggcat cgttgccgtg cagattgccg
      361 gcagcgatcc gcagcagatg gcggatgcgg cgcgttacaa cgtcagcctc ggggcgcagc
      421 ttatcgacat caatatgggc tgtcccgcca aaaaagtgtg caacgtccaa gccggcagcg
      481 cgctgatgca gaacgagccg ctggttgccg ccattttgga agccgtcgtc cgtgcggcag
      541 gcgtacccgt taccctcaaa acccgtttgg gctggcacga agaccatcaa aacctgcccg
      601 tcatcgccaa aatcgccgaa gattgcggca tcgccgccct tgccgtccac ggacgcacgc
      661 gcacgcaaat gtacaaaggc gaggcgcgtt acgaactcat cgccgaaacc aaatgccgtc
      721 tgaacatccc ggtctgggtc aacggcgaca tcacttcgcc gcaaaaagcc gccgccgtcc
      781 tcaaacaaac cgccgccgac ggcatcatga tagggcgcgg cgcgcaaggc agaccgtggt
      841 tcttccgcga tttgaaacat tacgccgaac acggtgtttt accgcctgcc ttgagtttgg
      901 cagaatgcgc cgccgctatt ttgaaccaca tccgcgccat acacgcgttt tacggcgata
      961 gtgcaggcgt acgcatcgca cgcaaacaca taggttggta catcggcgaa atgcccgacg
     1021 gcgaacaggc gcggcgtgaa atcaaccgct tggacagtgc ggcggcgcaa tacgacatgc
     1081 ttgcaggtta tcttgaaaga cttgccggaa aaaccgaccg
//
LOCUS       DAWGBY010000205         1053 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.205, whole genome shotgun sequence.
ACCESSION   DAWGBY010000205 DAWGBY010000000
VERSION     DAWGBY010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.205"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..612
                     /locus_tag="WHG62_002048"
     CDS             <1..612
                     /locus_tag="WHG62_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ1726091.1"
                     /translation="ANNTSTVSDYFRNIRAHSIHPRVSVGYDFGDWRIAADYASYRKW
                     NNNKYSVNTKELENKHNNKKDLKTENQENGTFHAASSLGLSAIYDFKLNDKFKPYIGA
                     RVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIRRLGLGVV
                     AGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGMRYHF"
BASE COUNT          295 a          307 c          226 g          225 t
ORIGIN      
        1 gcaaacaaca caagcacagt aagcgattat ttcagaaaca tccgtgcgca ttccatccac
       61 ccccgggtgt cggtcggcta cgatttcggc gactggagaa tagcggcaga ttatgccagt
      121 tacagaaaat ggaacaacaa taaatattcc gtcaacacaa aagagttgga aaacaagcat
      181 aacaataaga aagacctgaa gacggaaaat caggaaaacg gtacattcca cgccgcttct
      241 tctctcggct tatccgccat ttacgatttc aaactcaacg ataaattcaa accctatatc
      301 ggtgcgcgcg tcgcctacgg acacgtcaga cacagcatcg attcgaccaa aaaaacaaca
      361 gaggttgtta cctccaccca tggtggtgct gacacaaaac ctacgattta taatggggaa
      421 agtacgcaaa acgcctatca cgaaagccac agcatccgcc gcttgggtct tggtgtcgtc
      481 gccggtgtcg gtttcgacat cacgcccaag ctgaccctgg acaccggata ccgttaccac
      541 aactggggac gcttggaaaa cacccgcttc aaaacccacg aagtctcatt gggcatgcgc
      601 taccacttct gattccccga taccgatgcc gtctgaacct tcagacggca ttttttacac
      661 aattcccacc gtttcccatc attcccgata caccgtaatc tcgaaacccg tcattcccgc
      721 gcaggcggga atccagacct gtccgcacag aaacttatcg gataaaacgg tttctttaga
      781 ttttacgtcc tagattccca cttccgtggg aatgacggtt cagttgcatt cccgacaaca
      841 acgcaatctc gaaattcgtc attcccgcgc aggcgggaat ccagccccct gacgcggcgg
      901 gaatctatcg gaaatgactg aaaccccgag attctagatt cccactttcg tgggaatgac
      961 gtggtgcagg ttccgtatgg atggattcgt cattcccgac aacaccgtaa tctcgaaatc
     1021 cgtcattccc gcgcaggcgg gaatccagac ccc
//
LOCUS       DAWGBY010000206         1052 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.206, whole genome shotgun sequence.
ACCESSION   DAWGBY010000206 DAWGBY010000000
VERSION     DAWGBY010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.206"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..>1052
                     /locus_tag="WHG62_002049"
     CDS             <1..>1052
                     /locus_tag="WHG62_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ1726092.1"
                     /translation="NYDKLDSQKRRRFLGISYSKAHDTTTQVMKTALPSRVVAESANL
                     QSGWDTKLQGTQFETTLGGAVIRAGVGEQARADAKIILEGIKTTIHNETVSSSKSTLW
                     QKQAGRGSNIETLQLPSFTGPVAPVLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLK
                     QLQVAKNINWNQVQLAYDKWDYKQEGMTPAAAAVVVIVVTVLTYGALSAPAAAGTAGA
                     AGAGAGGAAAGTAAGTGVAAGTAATTGVAAGTSAAAITTAAGKAALASLASQAAVSLI
                     NNKGDINHTLKELGKSSTVRQAATAAVTAGVLQGISGLNTQAAEAVSKHFHSPAAGKL
                     TANLINSTAAASVHTA"
BASE COUNT          312 a          326 c          267 g          147 t
ORIGIN      
        1 aactacgaca aactagacag ccaaaaaagg cgcagatttc tcggcatcag ctacagcaaa
       61 gcacacgaca ccaccaccca agtcatgaaa accgcgctgc cctcaagggt agttgcagaa
      121 tctgccaatc tgcaatcagg ctgggatacc aaactgcaag gcacacagtt tgaaaccaca
      181 ctgggtggcg cggtcatccg tgcaggcgta ggcgagcagg cacgggcaga tgccaagatt
      241 atcctcgaag gcatcaaaac cacgatccac aacgaaaccg tgagcagcag caaatctact
      301 ctatggcaaa aacaggcagg acgcggcagc aacatcgaaa ccctgcaact gccaagtttc
      361 accggccccg ttgcgcccgt actgtccgca cccggcggtt acattgtcga tattcccaaa
      421 ggcaatctga aaaccgaaat cgaaaaactt gccaaacagc ccgagtatgc ttatttaaaa
      481 cagcttcaag ttgcgaaaaa catcaactgg aatcaggtgc agcttgctta cgataaatgg
      541 gactacaaac aggagggcat gacacccgca gcagcagctg tcgtcgttat cgtcgtaact
      601 gtattgacct acggcgcact gtccgccccg gcagccgccg gaacggcggg cgcggcaggc
      661 gcaggagcgg gaggagccgc agcaggaacg gcagccggaa ctggagtagc agcaggaacg
      721 gcagccacaa ccggagtagc agcaggcaca tcagctgcag ctatcaccac agccgcaggc
      781 aaagccgcac tggccagtct cgccagccaa gccgcagttt ccctcatcaa caacaaagga
      841 gacataaacc ataccctgaa agaactgggc aaaagcagca ccgtcagaca ggccgccacc
      901 gccgccgtaa ccgcaggcgt actgcagggc ataagcgggc tgaacaccca agcagccgaa
      961 gccgtcagca aacattttca cagtcccgca gcaggcaaac tgaccgctaa cctgatcaac
     1021 agcaccgctg ccgcaagtgt ccataccgcc at
//
LOCUS       DAWGBY010000207         1049 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.207, whole genome shotgun sequence.
ACCESSION   DAWGBY010000207 DAWGBY010000000
VERSION     DAWGBY010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.207"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(123..551)
                     /locus_tag="WHG62_002050"
     CDS             complement(123..551)
                     /locus_tag="WHG62_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ1726093.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(532..966)
                     /locus_tag="WHG62_002051"
     CDS             complement(532..966)
                     /locus_tag="WHG62_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HEZ1726094.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          269 a          318 c          189 g          273 t
ORIGIN      
        1 atttgaaaac cccattaaac cgtctttaac ccatcgtccc gaacggtaga tgtttcaccc
       61 ctgcaaacca aaaaaaagac cgtctgaata cagacggcca aagcctggtc acacatcact
      121 gcctaaaata aagctgcctg ctgtgccgca ggtcggctca tttcattgat aatcgtatat
      181 cccgttcgtg aagagatgcc gtatttaggg catagcttcg tcatcgccat cagcccgctc
      241 tccttatcaa tatcgcgcaa tttgacaaac tcctgataaa acctatggtt tctcaactgt
      301 attaacgcct tgccgcaccg tgggacatac aattcctcgc caccatatac ctgcaacagc
      361 tcatgtgttt tcacttcgcc gatggcttcg accaaaattg ccaaacgctc ggtgtccacc
      421 ttgcccttac caaatttaaa ccgcgccccg ccaatcgcct tgaccagctg ttccgtcgct
      481 gccagtccga tgacatccac aatgtccaac acggtatccg gcaataaatg ttcaactttt
      541 tcgaacccca tcatccccac ccgctttttc cgttttcctg ttttccgcaa tctgcaacgc
      601 agcaaccagt ttatgtagct gcgtatcgtc taaatattcg accttatcct taccaaacat
      661 ccgccgcgcc attgcgtgtg catagttcca atgtttgccg ccgacggtca gcagggcttc
      721 gactttgtcc aacattgccg ctgatgatgt ccgacgcaga tgtggtttac cgtgtgggtt
      781 accttttgct ttaggcttaa atccgtgcga ccgcatatca gcgacaacag actcaagttc
      841 ggaaacatcc atatccgcac acgaccgctt gcccgtcacg cgctccaaca ccgcgcgata
      901 ggtaccgtcg tccaagccca gctccttttg ggcaatttta attttcgcaa tcaacgcccg
      961 gcgcatctca aacccataaa acacaatata ttgactaatt aacgcatatt ataccaataa
     1021 aatacaatat atagtattaa gccgatgtt
//
LOCUS       DAWGBY010000208         1031 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.208, whole genome shotgun sequence.
ACCESSION   DAWGBY010000208 DAWGBY010000000
VERSION     DAWGBY010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.208"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            33..302
                     /locus_tag="WHG62_002052"
     CDS             33..302
                     /locus_tag="WHG62_002052"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726095.1"
                     /translation="MSGNHGLGGLLEEGAHEKSPKCLGGNLGDFGEFCKGLKRMKSTD
                     IQTQSFLAHFQRIVNAENFVNRFFAQVSASFRGMGNRIRKRTHAT"
     gene            365..>1031
                     /locus_tag="WHG62_002053"
     CDS             365..>1031
                     /locus_tag="WHG62_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ1726096.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGI"
BASE COUNT          288 a          217 c          248 g          278 t
ORIGIN      
        1 tgatccaact tcaatagtgg gaaacggtcg atgtgtctgg caatcatggc ttgggcggtt
       61 tgctggaaga aggtgctcat gagaaatccc ctaaatgtct tggtgggaat ttaggggatt
      121 ttggggaatt ttgcaaaggt ctcaaacgga tgaaatcaac cgatattcaa acacagtcat
      181 ttttagcgca ttttcagcgt atcgttaatg cggaaaattt cgtgaacagg ttttttgcac
      241 aggtctccgc ctcgtttcgc gggatgggaa accgtattag aaaacggacg cacgcaacat
      301 aaaccccgaa agtgatgata agatgatgat ttaacgtact gctttaatta tttaaggaat
      361 tatcgtgttt cccgacaaat acaagttgag tttggaagaa aatatttttc tggcaaagaa
      421 agtattggtt gcccaaattc acaacctcag ccgttttgag aattgtcaga cgaccttgtt
      481 gcagaccgaa caaattatcc atggcaaaaa tgtagcctcc gcgtcactgg aagacatcca
      541 aaccatcttg aacctgaaac gtgcctatca atatgtgatt tcgcatattt caaacggcga
      601 accggtcgat atttcactcc ttaaaaaaat caacaacatt gttgccaagg acgattcttt
      661 ggcacccggt gatttccgta ccggttcggt cggcgtaacg ctattggacg gttcccgtca
      721 tgccccaaat ccggtgaagg aaattgaagt ggctcgcgtg ttacaaaata tcggactgca
      781 aagcggttcg acgacggagg cagccgtccg ttttatgctt tattgtatgc ggcagcaggt
      841 tttttgggac ggcaacaaac gaacggcaac cttatttgcc aacggtctga tgatggcggg
      901 gggctgcggc atcttggaaa tctccgaaat gcagatgccg caattcaatg aaaaactgtc
      961 cgcattctat cgctccggcg acgataccga tatttccaag tttgtgtatc aaaattgtat
     1021 atcgggcata g
//
LOCUS       DAWGBY010000209          935 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.209, whole genome shotgun sequence.
ACCESSION   DAWGBY010000209 DAWGBY010000000
VERSION     DAWGBY010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.209"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            51..935
                     /locus_tag="WHG62_002054"
                     /pseudo
     CDS             51..935
                     /locus_tag="WHG62_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          305 a          130 c          222 g          278 t
ORIGIN      
        1 acagagtttt gtaaacaatc caagtaaaaa ataatttaaa ggatcttatt atgaatgagg
       61 gtgaagttgt tttaatacca gaacaaatcc aaaccttgcg tggttatgct ttccgtggcg
      121 atacctatgg cggttggcgt tatttggcta atttgggtga ccgttatgcg gatgatgctg
      181 ctgcaattgt cggtaaggat gcaaacttaa atggtttgaa tttatggatg aaaaaaaggg
      241 gtggaaaacc tatgggatga tacggtcggt aaaaagaccc gtttagagaa atttgatcgg
      301 gttgcattgc aacatttcag ccaatatgta gatctaatta atgaaaataa tggtagatta
      361 cctaacacta gtgaaattga gagaagttac tataaagccg ttacctatca tggcgtttct
      421 tctagtgcag ctattgattt agttattaat cgttcacttc cggatatggc ggatggttat
      481 tgggcattag gtttggggat agaagccgaa cgtatccaca atgagcaagc agtaaataat
      541 ccgaacggta gcgaatggga taatagaaag cagttaatat ctgctttaga taaaggattt
      601 gatggatctt ttaaagagaa gccttttact tttttacaat ctgtgataat ggatgtaaca
      661 aagttaggtg ttgaatatac aatagatggt tggcaaaaaa ttggaggttg gggtaatggg
      721 ataatcaatg atttatataa aagtgttgca aaaagagagt ggactggaat atttgagatc
      781 gttaataata acatcaagca atttagagat ctgttcccaa atccggaagg ctggattgat
      841 gatggtcacc aatgtttcgc tccttgggtt aaagaaacta aaaaacgcaa tggcaaatat
      901 catgtctacg accccctcgc cctagatttg gacgg
//
LOCUS       DAWGBY010000210          918 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.210, whole genome shotgun sequence.
ACCESSION   DAWGBY010000210 DAWGBY010000000
VERSION     DAWGBY010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.210"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(67..846)
                     /locus_tag="WHG62_002055"
     CDS             complement(67..846)
                     /locus_tag="WHG62_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ1726097.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          224 a          293 c          182 g          219 t
ORIGIN      
        1 cgtactggtt taaatttagt tcactatacc gatacatccg aatatgccag accgtctaaa
       61 cggtattcat acctcccaat cctgcacgcg cttcaaatcg ttttgcgcca aagtatccgc
      121 gtggcggtta cggctctgat attccctgtc tttcatgatg ctgcttgcca cataattcaa
      181 atgtgccttt gccgcctccg aagcctcgcc cggccgacgg ttcgatatcg cctcatacag
      241 cacgcggtgc tgcgccatca gtttcggacg cggatcttct tcctgattca gataaataag
      301 gctgctgcgc gtctgccggt acagcatttt caacaaaccg cccgacaaat ggctgaacaa
      361 caaattgtgc gccgcatccg caatcgtctg atggaagctg acatcggctt cgctctgatg
      421 ttccagattg ccgctttcgc acgcctcctc aaacttttca agccaaaacc caatccgctt
      481 caaatcggca tccgtccggc gttctgccgc caatgccgcc atacagccct cgatgtggca
      541 gctgaaatca aaaacatcct gttcccaatt ggaatgcttg cccaaaagct cctgccaact
      601 ttgcaaaaaa tcctgctgcg gcttgaccga aacataataa ccgtctccct gcctcgcttc
      661 caaaacctga cgggcaacca aaacattcaa tgccgaccgg accgacgggc gcgaaacgcc
      721 gaactcttcc gccaaaacgc gttcgggcgg aatcttgccc ccttccgcgt aaaccccttc
      781 cgcaatgcgc tcctccaata ccgacaatac ctgatcgctg attttctgag gccttaccag
      841 tttcatcact cctcctttat aaagattccc tgcagaaccc ttccgaaata tagtggatta
      901 acaaaaatca ggacaagg
//
LOCUS       DAWGBY010000211          880 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.211, whole genome shotgun sequence.
ACCESSION   DAWGBY010000211 DAWGBY010000000
VERSION     DAWGBY010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.211"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(212..844)
                     /gene="pdxH"
                     /locus_tag="WHG62_002056"
     CDS             complement(212..844)
                     /gene="pdxH"
                     /locus_tag="WHG62_002056"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ1726098.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
BASE COUNT          211 a          276 c          184 g          209 t
ORIGIN      
        1 cacgaattca gtaaattttt ctagaaatgt ggggttactt atggctgatt attttgcgat
       61 aactgtatta aatcttgttt tagataacct caaaaagagg actcgggctt tccgttcgga
      121 acacaaaaaa cttcccgtcc gtattttccc catgaaaaaa tgccgtctga aacccgattc
      181 ctgttttcag acggcatatg ttttttcctg ttcaaggcga cagccgctcg cgtatccagc
      241 cgccatccag caaacggtat tggatgcggt cgtgcagcct gctcggcctg ccctgccaaa
      301 actcaatcaa atcgggaatc acaatatagc cgccccaatg cggcggacgc ggcacgtgca
      361 aaggatgttt gagtccgacc gccgccgcct ttgccaccaa taccgccttg ttcggaatca
      421 cctcgctctg cgcacttgcc cacgcaccca aacggctctg atacgggcgg ctctcaaaat
      481 attcgtccga caacttctcc gccagccttt caacacgccc ttccacgcgc acctgacgct
      541 ccagctccgg ccaaaaaaac gtcatcgccg caaatggatg agcatccagc gaacgcccct
      601 tgcggctgtg ataattcgta aagaaaacaa aaccttcaga attaacttcc ttcagcagca
      661 ccatacggct gttaggcctg ccgcgtccgt cgaccgccgc cacattgacc gccgtcggct
      721 cgttgacctg tgcgcgtacc gcctcgtcca accaccgctc gaactgctcg atcggattgt
      781 cggcgcaatc gccttccgac aattcccgtt tgctgtaatc ttcccgaata ttgtgcaaat
      841 ccatttaccg ctcctcttaa tagtggatta acaaaaacca
//
LOCUS       DAWGBY010000212          866 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.212, whole genome shotgun sequence.
ACCESSION   DAWGBY010000212 DAWGBY010000000
VERSION     DAWGBY010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.212"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..272)
                     /locus_tag="WHG62_002057"
     CDS             complement(<1..272)
                     /locus_tag="WHG62_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element IS1016C family transposase"
                     /protein_id="HEZ1726099.1"
                     /translation="MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFY
                     RKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKGRRGRGAAGKVV"
BASE COUNT          271 a          162 c          169 g          264 t
ORIGIN      
        1 accacttttc ctgccgcacc gcgaccacgt ctgcctttac gccgtccgcc gaaatcgctt
       61 tcgtccggct cgacagggcc ctcaaaaacc tcatcggcag ccaaggccaa atgatggttg
      121 ataaccgtgc ggattttacg gtagaacagt gctgccgaat tgggatggat acccaaaata
      181 tcggcggcag aacgggcggt aacttccagc acaaaaaaac ggagcagttc tttctgtact
      241 tttttcttta atttgcagtg cgttatcttc atatttcgag ggtaacatat ctgctaatct
      301 agtacagccc caaaaatata ccaaaaacag caaaacaaat tgtaaggata ggtataggct
      361 ttgtaaaggt aaattgtgaa aaaagcagtt ttttaaacga atgaaacggc ttcgggctga
      421 aatatatgct gatgccctgt ccttcccgta tatcttgtgt gttgtcaaag tgcaggctgc
      481 tttgaaatcg gtattgccat ctatgaacca ccactttgtt ttatttcagc gggcttgaga
      541 tgtgtataag aatattgttt tgaataaatt taaaaaaatg ataatcgtta ttgaagattt
      601 ttaaaggaaa gcgtagagtg ccaattctat gaagcaatac ggtaagtaac aatgaaaata
      661 tctactgctt gggtatagag catatttcac aacccgtgac tattcttgcg gaaacagaga
      721 aaaaagtttc tcttctatct tggataaata tatttaccct cagtttagtt aagtattgga
      781 atttatacct aagtagtaaa agttagtaaa ttatttttaa ctaaagagtt agtatctacc
      841 ataatatatt ctttaactaa tttcta
//
LOCUS       DAWGBY010000213          811 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.213, whole genome shotgun sequence.
ACCESSION   DAWGBY010000213 DAWGBY010000000
VERSION     DAWGBY010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.213"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..>811
                     /locus_tag="WHG62_002058"
     CDS             <1..>811
                     /locus_tag="WHG62_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ1726100.1"
                     /translation="KKHKVALVVTESTGGLEIPAAKAIRRAGIAVIIANPRQTHQFAQ
                     SQPLTKTDAKDAKMPAFFAQMTAQKEDSQTMPYQPPTEAEEVLEALVNRRNQPADMRT
                     AEKNRLYQVHETQVGSVKQLIAHFDRLIDELDKQIDNHTHTHFDGKDQVAEQIKGIGS
                     ITTATLMAMLPELGRLSHKRIAGLAGIAPHPREGGETKFKSRCFGGRSAVRKALYMAT
                     VAATRFEPLIRDFHQRPLSEGKPYKVAVTACMRKLLTISNARMRDYFAENDT"
BASE COUNT          219 a          231 c          218 g          143 t
ORIGIN      
        1 aaaaaacaca aggtcgccct cgtcgtgacg gaaagtactg gcggtctcga aatccccgcc
       61 gccaaagcca tccgccgagc aggcatagcc gtgattatcg ccaacccgcg tcagacgcat
      121 cagtttgccc aatcgcagcc gctgaccaaa accgacgcca aagatgccaa aatgcccgcc
      181 ttcttcgcac agatgacggc acagaaagaa gattcgcaaa ccatgcccta ccaaccgccc
      241 accgaagcgg aagaagtgtt ggaagccttg gttaaccgcc gcaaccaacc ggcggatatg
      301 cggactgccg agaaaaaccg tctgtatcag gttcacgaaa cgcaagtcgg aagcgtcaaa
      361 caactgattg cccattttga ccggctgatt gacgaattgg acaaacaaat cgacaaccac
      421 acccacacgc attttgacgg caaagaccaa gtggcggagc aaatcaaagg catcggttcg
      481 ataacgacgg ctacgctgat ggcgatgttg cccgaattgg ggcggctgtc gcacaaacgg
      541 atagcgggtt tggccggcat tgccccgcac ccgagggagg gcggggaaac caaattcaaa
      601 agccgctgct ttggcggaag gtctgcggtg cgtaaagcac tgtatatggc taccgtggca
      661 gcgacacgtt ttgaaccgct tattcgggat ttccaccaac gcccgctgtc cgagggtaag
      721 ccgtataagg ttgccgttac ggcatgtatg cgcaaactgc tgacgatatc gaatgcccgg
      781 atgcgtgatt attttgccga aaacgatacc g
//
LOCUS       DAWGBY010000214          809 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.214, whole genome shotgun sequence.
ACCESSION   DAWGBY010000214 DAWGBY010000000
VERSION     DAWGBY010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.214"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            348..647
                     /locus_tag="WHG62_002059"
     CDS             348..647
                     /locus_tag="WHG62_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ1726101.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFFFAALTVLKLKGYQAGLYTLLIALAVAVFGFGMPAGMAVSSLPPQPH"
     gene            641..809
                     /locus_tag="WHG62_002060"
                     /pseudo
     CDS             641..809
                     /locus_tag="WHG62_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777280.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT          220 a          223 c          172 g          194 t
ORIGIN      
        1 atccactata catcaaacat caaattggac tgaccaatca gggcggattc taatgacacg
       61 ccgttcccgc cgtcaacggc atttacctcg caccgccccc gaaacacaag aaaaaactac
      121 accaaactac aatttttgtt tatacaaata tttgttttga caggatttaa acgaaagctc
      181 cgattcaaat ctgccgaacc gcccaaaaat atatagtgga ttaacaaaaa tcaggacaag
      241 gcgacgaagc cgcagacagt acagatagta cggtaaggcg aggcaacgcc gtactggttt
      301 aaatttaatc cattctattg acctgaatat taaagtttcg caaagtaatg caacgttgct
      361 ttaattggtt tgaccactat tgccgacgat tagaaaaata ttttcggaga tgttcaatta
      421 tggaaacttg ggttcaaaac tacacggcaa tcggcggcag cctgtatctg actgccgccg
      481 ccgcactctt acccatcgtc tttttctttg ccgcgctgac cgtcctgaag ctgaaaggct
      541 atcaggcggg gctttatacg ctgctgattg cgcttgccgt tgccgtattc ggcttcggga
      601 tgccggcggg tatggcggtt tcttccctgc cgccgcagcc gcactgaccc aacgccccta
      661 cgccacgctg gatttgaccg cgcattacaa aatcggcaaa tccacccgca ttggtttgga
      721 ctttgaaaac gtgttcaaca aacgctaccg ccctatgccc gacattcacg tttacggcac
      781 gccgcgcagc ctgaccgcaa ccgtcaaac
//
LOCUS       DAWGBY010000215          772 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.215, whole genome shotgun sequence.
ACCESSION   DAWGBY010000215 DAWGBY010000000
VERSION     DAWGBY010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.215"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            88..606
                     /locus_tag="WHG62_002061"
     CDS             88..606
                     /locus_tag="WHG62_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726102.1"
                     /translation="MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGVIAVKKE
                     KGNYFLNKINVFTGKEESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARKALPSNQTYQQRQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLL"
BASE COUNT          227 a          157 c          221 g          167 t
ORIGIN      
        1 caactatagt ttttgcaaat caatattgac aagctgaaaa aaaaaaacaa tatactcgct
       61 cggtcttaat gttaacggag tatggaaatg aaacaaatgc ttttagccgt cggcgtggtg
      121 gcggtgttgg cgggctgcgg caaggatgcc ggcggttacg agggttattg gcgcgaaaag
      181 tcggacaaaa aagagggcgt gattgccgtc aaaaaagaaa aaggcaatta cttccttaat
      241 aaaatcaacg tatttacagg caaggaggag tctttgcttt tgtctgaaaa agacggcgcg
      301 ctttcgataa acacggggat aggggaaatc ccgatcaaac tttccgacga cgggaaagag
      361 ctgtatgtcg aacgcaggca gtatgtcaaa accgatgcgg cgatgaagga caaaatcatc
      421 gcccatcaga aaaagtgcgg acaaacggca caggcatacc tcgacgcgcg aaaggcgttg
      481 ccgtcaaacc aaacgtatca gcagcgtcag gcggcgatcg agcagttgaa acggcggttt
      541 gaagccgagt ttgacgaatt ggaaaaagaa atcaaatgca acggcaaacc gacattgttg
      601 ctttagcaga ggacaaccgg gaggatgccg ccgtccgaat cggacgtgcg gttttcgtac
      661 cggtacgggc gggcaggaat gtccgctttt tttgttcgga cgcgtttgaa tacccgtttg
      721 attccgtccg tttgcaaggg gtatttccgt tcgggcggaa attatagtgg at
//
LOCUS       DAWGBY010000216          766 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.216, whole genome shotgun sequence.
ACCESSION   DAWGBY010000216 DAWGBY010000000
VERSION     DAWGBY010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.216"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(89..640)
                     /locus_tag="WHG62_002062"
     CDS             complement(89..640)
                     /locus_tag="WHG62_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726103.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDLEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
BASE COUNT          218 a          284 c          141 g          123 t
ORIGIN      
        1 aagaaaccgc cattagcact acaccccccc aagctgcggc tgccaaacac atcggctgct
       61 tctcgacgca cccgctgaaa aatgcgtcct atccgtccgc cttgcccgca ccccctgact
      121 ttgccgccct gcccgatgcc gtctgaagcc tgaaccgccc caccagcccg atgacgcacg
      181 acaccgccgg aaagggcata cacaaagccg tcagcacata acgcgcattc cccgtattga
      241 ccacgtccgc gcccttcagc agcagcggta gcgcgttcgc ccactcccac accgacggcg
      301 cgctgaacgc caataccgcc accagcccca acatccggaa caccccgatt tccaacacct
      361 gccgccgccg caccgaacgg ttgagcaaaa acacaaccgc caacccgaaa cagaccaccg
      421 ccgccatacc gccgttggcg acaatctgca aactgttgaa tgcaatatcg ggcgtaaccg
      481 ccaacacgcc ttccaaatcc ggcacggcac gctgcaaatc caaaccctgc aacacattca
      541 acacaaaacc gtagatcaaa tcaaaaaaca ccacgcctat cggcaaagca ctcaaaaccc
      601 gccacatctt cctgtccgac caaccgttca aaaccttcat tttacccgac cacgcaagcc
      661 gccgaacaaa aaataagggg ctgtcctaga taactaggac aaacttgatt ttactaattg
      721 ttttaaaatg gaacaagaac ttttatctca ctgttgttaa aacgtc
//
LOCUS       DAWGBY010000217          746 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.217, whole genome shotgun sequence.
ACCESSION   DAWGBY010000217 DAWGBY010000000
VERSION     DAWGBY010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.217"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..264
                     /locus_tag="WHG62_002063"
     CDS             <1..264
                     /locus_tag="WHG62_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HEZ1726104.1"
                     /translation="FYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQT
                     DFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLIH"
     gene            complement(306..518)
                     /locus_tag="WHG62_002064"
     CDS             complement(306..518)
                     /locus_tag="WHG62_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEZ1726105.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILESVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
BASE COUNT          197 a          194 c          175 g          180 t
ORIGIN      
        1 ttctaccaac acaccaaaat aaccaaagca ttgaaagcgg agacttattt ttgtcgccct
       61 taccattctt gggagaaagg gctgaatgag aacaccaacg gactcatccg gcaatacttc
      121 cccaaacaaa ccgatttccg taacatcagt gatcgggaga tacgcagggt tcaagatgag
      181 ttgaaccacc gaccaagaaa aacacttggc tacgaaacgc caagtgtttt attcttgaat
      241 ctgttccaac cactaataca ctagtgttgc acttgaaatc cgaatccaag ggcatttttg
      301 ccgctttatt tcaacgcggc atcatagccg ccgtcttcaa cggcttcaat caacgcccct
      361 gcatcggttt gcgcggggtc gtatccgacg gtcgcgcttt tgttttcaag gctgacttcg
      421 acgcttgcca cgcctttgac gctttccagt atccgggtaa cgcttttgac gcagccgccg
      481 cagctcatgc cgccgatgtc gaggataagg gtttccatga ttttcctttc gttggaactg
      541 caatctgacg agcgttattg taagtcgggg cgtgaacttg ggcaaacgcg gaaacggtgc
      601 ggcggtttgg aaaaagacgg acgcttgcgc ataatggcgg caattcccat caggacgaca
      661 acaatgaacg cttcacaaaa accctggttg agcatcatcg ccttggcaat cggcgcattt
      721 atagtggatt aacaaaaacc agtacg
//
LOCUS       DAWGBY010000218          703 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.218, whole genome shotgun sequence.
ACCESSION   DAWGBY010000218 DAWGBY010000000
VERSION     DAWGBY010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.218"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            26..703
                     /locus_tag="WHG62_002065"
     CDS             26..703
                     /locus_tag="WHG62_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HEZ1726106.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
BASE COUNT          217 a          136 c          156 g          194 t
ORIGIN      
        1 tcaaaaaacc tgataagctc ctaatatgaa actaaaaaat aagtatcaaa agttcagcaa
       61 aatttcagag caaaagttta gagaaataat ccgctgtttc gctcttgatt tgaccgcttc
      121 cgatactgct aaaatgaccg gcattagtgt acgcggtatc aatcctattt tcctgaaaat
      181 cagacacagg attgctgctc tgtgcgaaca aagctcacca ctgtccggtg tggtcgaatt
      241 agatgaatct tactttggtg cgcgacgtat caggggtaag cgcggtcgcg gagcgtcagg
      301 taaaaccatc gtatttggca tactgaaacg caatggcgtg gtctatacgg aaatcgttcc
      361 cgacgcttcg aaagcctcac taatcaaggt catacgtggt cacatatctg ctgacagtga
      421 aatcaatact gacggctgga aagcatatga cggtcttgtc gatatgggct atgagaagca
      481 ttaccgtgtc catcatggtt ccaatgagtt tgctcgagga aagcaacata tcaatggtat
      541 tgaatctttt tggagttata ctaaggggcg tttggctaaa tttcatggta tttccaaaga
      601 gatgttttat ctgcatctca aagaaacgga gtttaggttt aaccaccggc atgaagattt
      661 aggtaaaata ttaatgaaga tgcttcgaaa taacccaatt taa
//
LOCUS       DAWGBY010000219          684 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.219, whole genome shotgun sequence.
ACCESSION   DAWGBY010000219 DAWGBY010000000
VERSION     DAWGBY010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.219"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
BASE COUNT          188 a          141 c          187 g          168 t
ORIGIN      
        1 gggaatctag acctttcggt gcggaaactt atcggataaa acggttttcc ctgcatcctg
       61 gattcccact gtcgtgcgaa tgacgggata taggtttcac tacggacgtg ttcagattac
      121 cgcctgcgcg ggaaggacgg gatttcaggt tgctgttttt gattttctgt ttttgtggga
      181 ataacgggac tttggatgat gtgcatttat cgggaaaaca aaaaaccctc cgccgtcatt
      241 cccgcgaaag cgggaatcta gaattttaat gctgcaagaa tttatcgggg atgaccgagg
      301 tttgaaggtc tggattcccg cctgcgcggg aatgacggtt tagaaatcac ccgaaacgag
      361 aaaaagaacc gaaaccgaac aagccggatt cccacctgcg cgggaatgac gggatttcag
      421 gttactgttt ttgattttct gttttgtggg aataacggga ttttggatga tgtgcatttt
      481 cgggaaaact aaaaaccctc cgccgtcatt cccgcgaaag tgggaatcta gaattttaat
      541 gcggcaagaa tttatcggaa aaaactgaag tttaaagacc tagattcccg cctgcgcggg
      601 aatgacggtt tagaaatcac ccgaaacgag aaaaagaacc gaaaccggac aagtcggatt
      661 cccgcgcggg cgggaaggac ggaa
//
LOCUS       DAWGBY010000220          669 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.220, whole genome shotgun sequence.
ACCESSION   DAWGBY010000220 DAWGBY010000000
VERSION     DAWGBY010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.220"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(128..>669)
                     /locus_tag="WHG62_002066"
     CDS             complement(128..>669)
                     /locus_tag="WHG62_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ1726107.1"
                     /translation="SAVESRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAENKAVPAP
                     APQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAAADGKVV
                     YAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDASRTQL
                     HFEVRQNGKPVNPNSYIAF"
BASE COUNT          151 a          192 c          186 g          140 t
ORIGIN      
        1 caaacacagt caaacaaatt tatatgcccc atcccttccg aataatttga aaacacagcc
       61 gccaaaaaca aaaatgccgt ctgaaaacct ttcagacggc atttccaatt tgatttcagg
      121 cagaaagtca gaacgcgata tagctgttcg ggttaaccgg tttgccgttt tgccgcacct
      181 cgaaatgaag ctgcgttctg gaagcgtcgg tattgcccat caaagcgacc tgctgcccgc
      241 gtttgacctg ctggccttcg ccgaccagca atttttggtt gtgcccgtat gcggtcagga
      301 aggaagaatt atgctggatg atgaccagat tgccgtatcc cctcaaaccg gaacctgcat
      361 aaaccacttt gccgtcagcc gccgccaaaa cgggctgtcc cgcattaccg gcaatatcga
      421 cacccttgtt gttgccgccg aaatcggcaa ccactttacc ttgcgtcgga cgctgccaaa
      481 caatgccgcc gaccgaacgc gtgccggaag gcgaagcggc aggagattgc ggggcgggcg
      541 cgggaaccgc tttattttcc gcagcgggcg cggcaggttg cggcgcggac tgcacaggcg
      601 gttgcgcggc gggtttcaca ggggtttgca cggcagccgg tacggcgggc ctgctttcta
      661 cggctgagg
//
LOCUS       DAWGBY010000221          621 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.221, whole genome shotgun sequence.
ACCESSION   DAWGBY010000221 DAWGBY010000000
VERSION     DAWGBY010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.221"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..465
                     /locus_tag="WHG62_002067"
     CDS             <1..465
                     /locus_tag="WHG62_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ1726108.1"
                     /translation="KESNYSKKVTEFKHENGNKKEDKTEHQGNGSFHAASSLGLSAIY
                     DFKLNDKFKPYIGARVAYGHVKHQVHSVESKTTTVTSKGGGPIPQGPTPKPPYHESNS
                     ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYHF"
BASE COUNT          181 a          185 c          128 g          127 t
ORIGIN      
        1 aaagaaagta attattctaa aaaagttact gaatttaaac acgaaaacgg caacaaaaaa
       61 gaagacaaaa cagaacatca gggaaacggc agcttccacg ccgcttcttc tctcggctta
      121 tccgccattt acgatttcaa actcaacgat aaattcaaac cctatatcgg cgcgcgcgtc
      181 gcctacggac acgttaaaca tcaggttcat tcagtggaaa gcaaaaccac gactgttacc
      241 tctaaaggtg gaggccctat cccacaaggt ccgaccccca aacctcccta tcacgaaagc
      301 aacagcatca gcagcttggg tcttggtgtc atcgccggtg tcggtttcga catcacgccc
      361 aagctgactt tagacaccgg ataccgctac cacaactggg gacgcttgga aaacacccgc
      421 ttcaaaaccc acgaagtctc attgggcgtg cgctaccact tctgattccc cgacaccgat
      481 gccgtctgaa ccttcagacg gcatttttga ttcacctgcc gttgacaaac gcggggcggg
      541 cgtggaaata cccaaaccgt cattcccgat acaccgtaat cttgaaatcc gtcattcccg
      601 cgcaggcggg aatccagacc t
//
LOCUS       DAWGBY010000222          599 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.222, whole genome shotgun sequence.
ACCESSION   DAWGBY010000222 DAWGBY010000000
VERSION     DAWGBY010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.222"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..150
                     /locus_tag="WHG62_002068"
     CDS             <1..150
                     /locus_tag="WHG62_002068"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726109.1"
                     /translation="SIRQGKPEEEFSRKMAGCLTDLENCLEKYLEQFGPVSESIEACT
                     VKLQE"
     gene            172..465
                     /locus_tag="WHG62_002069"
     CDS             172..465
                     /locus_tag="WHG62_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ1726110.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPDRPDCFDMKAVWQMFNRIPR"
BASE COUNT          159 a          151 c          158 g          131 t
ORIGIN      
        1 tccattcggc agggaaagcc tgaagaagaa ttttcccgca agatggccgg ctgcctaacc
       61 gacttggaaa actgtttgga aaaatacctc gaacagttcg ggccggtatc ggaaagtatc
      121 gaagcctgta ccgtcaaact gcaggagtaa ccgtcgttct tcaacaggct gatgaaaacc
      181 aacgacaagc tcaataggca gattgacgtg ttgcagaaac agtcggcagc catccacaac
      241 gaagcctata tcgaaatgaa cacgctgctt taccgccacc gcgaagtggt ttccgtccac
      301 aaccgcaagg cggattatgc ggaaaagggc aaagagcgga ttgcgctgtt cccgcgcggc
      361 ttgaacggca tcaccaagct gcctgccgcc gtcctgttgc ccgatcgtcc cgattgtttt
      421 gatatgaagg cagtttggca aatgtttaat agaataccga ggtaggcgta tcggctgccg
      481 gataaaaatg ccgtctgaaa cggaagcgtt cagacggcat tgttgcagtg gaacaaatca
      541 aaatgcaccc cgtcattcct gtctgtacgg tgatagcggc agtgttttcc tgcttcgtt
//
LOCUS       DAWGBY010000223          561 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.223, whole genome shotgun sequence.
ACCESSION   DAWGBY010000223 DAWGBY010000000
VERSION     DAWGBY010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.223"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            34..>561
                     /locus_tag="WHG62_002070"
     CDS             34..>561
                     /locus_tag="WHG62_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ1726111.1"
                     /translation="MPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTC
                     TGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSK
                     EEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEG
                     LRFAIREGGRTVGAGV"
BASE COUNT          137 a          141 c          160 g          123 t
ORIGIN      
        1 actcccgagc gtgccgtgga caaacctttc ttgttgccta tcgaagacgt attctctatt
       61 tccggtcgtg gtacagtagt aaccggccgt gtagagcgcg gtatcatcca cgttggtgac
      121 gagattgaaa tcgtcggtct gaaagaaacc caaaaaacca cttgtaccgg tgttgaaatg
      181 ttccgcaaac tgctggacga aggtcaggcg ggcgacaacg taggcgtatt gctgcgcggt
      241 accaaacgtg aagacgtgga acgcggtcag gtattggcca aaccgggtac tatcactcct
      301 cacaccaagt tcaaagcaga agtgtacgta ttgagcaaag aagagggtgg ccgccatacc
      361 ccgttcttcg ccaactaccg tccgcaattc tacttccgta ccaccgacgt aaccggcgcg
      421 gttactttgg aagaaggtgt ggaaatggta atgccgggtg agaacgtaac cattaccgta
      481 gaactgattg cgcctatcgc tatggaagaa ggcctgcgct ttgcgattcg cgaaggcggt
      541 cgtaccgtgg gtgccggcgt g
//
LOCUS       DAWGBY010000224          552 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.224, whole genome shotgun sequence.
ACCESSION   DAWGBY010000224 DAWGBY010000000
VERSION     DAWGBY010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.224"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            250..>552
                     /locus_tag="WHG62_002071"
     CDS             250..>552
                     /locus_tag="WHG62_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1726112.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDY"
BASE COUNT          145 a          150 c          110 g          147 t
ORIGIN      
        1 atttctgttt ttgatttttt gtttttgggg aatgacggga tttgagattg cgggcattta
       61 tcgggtaaaa cggaaattat gcgttacgaa aatttatccg aaatcacggc aacttttcca
      121 ccgtcattcc cacgaaagtg ggaatctagg tctgtcggca cggaaactta tcgagaaaaa
      181 cggtttgaga cctttgcaaa attccccaaa atcccctaaa ttcccaccaa gacatttagg
      241 ggatttctca tgagcacctt ctttcaacaa accgcccaag ccatgattgc caaacacatc
      301 gaccgtttcc cgctattgaa gttggaccag gtgattgatt ggcagccgat cgaacaatac
      361 ctgaatcgtc aaaaaacccg ttaccttaga gatcaccgcg gccgtcctgc ctatcccctg
      421 ctgtccatgt tcaaagccgt cctgctcgga caatggcaca gcctctccga tcccgaactc
      481 gaacacagcc tcattacccg catcgatttc aacctgtttt gccgttttga cgaactgagc
      541 atccccgatt ac
//
LOCUS       DAWGBY010000225          544 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.225, whole genome shotgun sequence.
ACCESSION   DAWGBY010000225 DAWGBY010000000
VERSION     DAWGBY010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.225"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            191..544
                     /locus_tag="WHG62_002072"
                     /pseudo
     CDS             191..544
                     /locus_tag="WHG62_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          162 a          151 c          119 g          112 t
ORIGIN      
        1 ctttgacgaa ctgagcatcc ctgattacag tatagtggat taacaaaaac cagtacggcg
       61 ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg ctgaagcacc aagtgaaagt
      121 gaatcggttc cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt
      181 aatccactat actttatgcc gctaccgcaa ccggctggcg caagacgaca ccctgtccga
      241 attgctcaaa ctgattaact gccaactgac cgaaaaaggc ctaaaagtag agaaagcatc
      301 cgccgccgtc gttgacgcca ccattattca gaccgccggc agcaaacagc gtcaggctat
      361 agaagtcgat aacaaaggac aagtcagcgg ccaaaccaca ccgagtaagg acagcgatgc
      421 ccgttggatc aagaaaaacg gcctctacaa actcggttac aaacaacata cccgtaccga
      481 tgcggaaggc tatatcgaga aactgcacat tacccccgcc aatgcccatg agtgcaaaca
      541 cctg
//
LOCUS       DAWGBY010000226          538 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.226, whole genome shotgun sequence.
ACCESSION   DAWGBY010000226 DAWGBY010000000
VERSION     DAWGBY010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.226"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..126
                     /locus_tag="WHG62_002073"
     CDS             <1..126
                     /locus_tag="WHG62_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1726113.1"
                     /translation="KFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANKLSAPAAA"
BASE COUNT          161 a          124 c          136 g          117 t
ORIGIN      
        1 aaattccgct atgcgcgggc agcctatttc ggactgatta aagtgagtgc gcaaagccat
       61 ctgaaggcga tgtgtttgaa cctgttgaaa gccgccaaca agctaagtgc gcccgctgcc
      121 gcctaaaagg agaccggatg cctgattatc gggtatccgg ggagggttaa gggggtattt
      181 gggtaaaatt aggaggtatt tggggcgaaa atagacgaaa acctgtgttt gggtttcggc
      241 tgtcgggagg gaaaggaatt ttgcaaagat ctcatcctgt tattttcaca aaaacagaaa
      301 accaaaaaca gcaacctgaa attcgtcatt cccgcgcagg cgggaatcca gacccccaac
      361 gcggcaggaa tctatcggaa ataaccgaaa ccggacgaac ctagattccc gctttcgcgg
      421 gaatgacggc agagtggttt cagttgctcc cgataaatgc cgccatctca agtctcgtca
      481 ttcccttaaa acagaaaacc gaaatcagaa acctaaaatt tcgtcattcc cataaaaa
//
LOCUS       DAWGBY010000227          517 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.227, whole genome shotgun sequence.
ACCESSION   DAWGBY010000227 DAWGBY010000000
VERSION     DAWGBY010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.227"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
BASE COUNT          152 a          146 c          106 g          113 t
ORIGIN      
        1 caacgatgta ctggtttttg ttaatccact atatccgttt gcgcccgcca agccgtgttg
       61 cacagatgcg acacggcttt tttctttccg ttgtcagaat gtaaattttc gtcaaaaaac
      121 atcaaaaatc accacccccc ccgaatttgc gtaaaataaa gtgtaatccc tttgattata
      181 agggaatgtt gacaattaga tcgattctcc taggctgact ttcgcaataa atggggttgt
      241 caataattgt gtatggtcgt ttgccgtccg gcggccgtca ttcccgcgca ggcgggaatc
      301 cagaaacgca acgcagcagg actttatcgg aaaaaaccga aatcccaccg ccgtcattcc
      361 cgcgcaggcg ggaatccagc aacacaacgc agcaggactt tatcggaaaa aaccgaaacc
      421 ccaccgaccg tcattcccgc aaaagcggga atccagcaac cgaaaaacca caggaatcta
      481 tcagcaaaaa cagaaacccc accgccgtca ttcccgc
//
LOCUS       DAWGBY010000228          509 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.228, whole genome shotgun sequence.
ACCESSION   DAWGBY010000228 DAWGBY010000000
VERSION     DAWGBY010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.228"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..318
                     /locus_tag="WHG62_002074"
     CDS             <1..318
                     /locus_tag="WHG62_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1726114.1"
                     /translation="HLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEH
                     TIRDEADFACHFDYLHFNPVKHGYVGQISDWRFSTFHRYVKQGIYPHNWGGGHADFSI
                     GYD"
     gene            355..471
                     /locus_tag="WHG62_002075"
                     /pseudo
     CDS             355..471
                     /locus_tag="WHG62_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          131 a          118 c          127 g          133 t
ORIGIN      
        1 catctgcata ccatatggcg gctgccggac aatgattctg cttattcgga acgctggagg
       61 cagatcaagc ggcacagcca atatttaatc ggcggcaatc tcaggctttg gcaaaaacgc
      121 ttttgggaac atactatccg cgatgaggcc gattttgcct gccattttga ttatctgcat
      181 ttcaatccgg tcaaacatgg ctatgtagga caaatttccg attggcggtt ttctacgttt
      241 caccgttatg tcaaacaggg tatttatccg cataattggg gtggcggcca tgcggacttt
      301 tctattggat acgattaaag taatgtcgga ttcgagaatc cgacctacgg aaaactgaaa
      361 gagcatcggc tgcaggacgg cattatgcgc aaagcctgcc gtaaccgtcc gctggcggaa
      421 gtgcaaacca aacgtaaccg atatttatcg aagacccgtt atgtggttga ataaagcttc
      481 ggtacgctgc accgtaagtt ccgctatgc
//
LOCUS       DAWGBY010000229          473 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.229, whole genome shotgun sequence.
ACCESSION   DAWGBY010000229 DAWGBY010000000
VERSION     DAWGBY010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.229"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..193
                     /locus_tag="WHG62_002076"
     CDS             <1..193
                     /locus_tag="WHG62_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1726115.1"
                     /translation="ERQNHINGIENFWNRAKRHLRKFDGIPKAHFELYLKGYERRFNN
                     SEIKVQISILKQLVKSSLS"
     gene            273..398
                     /locus_tag="WHG62_002077"
                     /pseudo
     CDS             273..398
                     /locus_tag="WHG62_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          177 a           92 c           88 g          116 t
ORIGIN      
        1 tgaacgacaa aaccatatta atggaattga gaacttttgg aaccgggcaa aacgtcattt
       61 acgcaagttt gacggcattc ccaaagcgca ttttgagctg tatttaaagg ggtacgaacg
      121 gcgttttaac aacagtgaga taaaagttca aatttccatt ttaaaacaat tagtaaaatc
      181 gagtttatcc tagttatcta ggacagcccc aaaaacaaaa tagtacaata ttcaactttg
      241 aaggtctaac catggcatac tctgcggact taagaaacaa agctttaaac tatagtggat
      301 taaatttaaa tcaggacaag acgacgaagc cgcagacagt acaaatagta cggcaaggcg
      361 aggcaacacc gtactggttt aaatttaatc cacgatatta cgaacaatgc aaaaacatca
      421 gccaaaccgc agcaacgttt aacttgtcaa gaaacacgct ttacctgtgg att
//
LOCUS       DAWGBY010000230          461 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.230, whole genome shotgun sequence.
ACCESSION   DAWGBY010000230 DAWGBY010000000
VERSION     DAWGBY010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.230"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
BASE COUNT          123 a          145 c           95 g           98 t
ORIGIN      
        1 caaacaatac cgtctgaaag ctctgtaggg agggcttcag cccaccgatt ccatcaatcc
       61 cacatttccg ccgttttcac cgaatccgcc ccttttcaca atccagtcct acgcaactga
      121 accgtcattc ccgcgcaggc gggaatctag acctgtcggc acagaaactt atcgggcaaa
      181 acggtttctt gagattttac gtcctagatt cccgcctgcg cgggaatgac gcgtttcatt
      241 tgccgccccc tcccgaaaaa cgcaaaaaat gccgtccgaa aacctttcgg acggcatttt
      301 cgcgtgaacc gtcattccca cgaaaacaga aaaccaaaat cagaaaccta aaattcgtca
      361 ttcccacgaa agtgggaatc caggactcag gacctgagaa acctttttac ccgataagtt
      421 cccgtaccga ccggtccgga ttcccgcctg cgcgggaatg a
//
LOCUS       DAWGBY010000231          458 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.231, whole genome shotgun sequence.
ACCESSION   DAWGBY010000231 DAWGBY010000000
VERSION     DAWGBY010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.231"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..318
                     /locus_tag="WHG62_002078"
     CDS             <1..318
                     /locus_tag="WHG62_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ1726116.1"
                     /translation="HLHTIWRLPDNDSAYSERWRQIKRHSKYLIGGNLRLWQKRFWEH
                     TIRDEADFAWHFDYLHFNPVKHGYVGQISDWGFSTFHRYVKQGIYPHNWGGGNADFSI
                     GYD"
     gene            355..458
                     /locus_tag="WHG62_002079"
                     /pseudo
     CDS             355..458
                     /locus_tag="WHG62_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          121 a          105 c          116 g          116 t
ORIGIN      
        1 catctgcata ccatatggcg gctgccggac aatgattctg cttattcgga acgctggcgg
       61 cagatcaagc ggcacagcaa atatttaatc ggcggcaatc tcaggctttg gcaaaaacgc
      121 ttttgggaac atactatccg cgatgaggcc gattttgcct ggcattttga ttatctgcat
      181 ttcaatccgg tcaaacatgg ctatgtagga caaatttccg attgggggtt ttctacgttt
      241 caccgttatg tcaaacaggg tatttatccg cataattggg gtggcggcaa tgcggacttt
      301 tctattggat acgattgaag taatgtcgga ttcgagaatc cgacctacgg aaaactgaaa
      361 gagcatcggc tgcaggacgg cattatgcgc aaagcctgcc gcaaccgtcc gctgacggaa
      421 aatcaaacca agcgtaaccg atatttgtcg aagacccg
//
LOCUS       DAWGBY010000232          455 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.232, whole genome shotgun sequence.
ACCESSION   DAWGBY010000232 DAWGBY010000000
VERSION     DAWGBY010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.232"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
BASE COUNT          137 a           94 c          110 g          114 t
ORIGIN      
        1 gactgaaact caaaaaactg gattcccact ttcgtgggaa tgacgaagtg gaagttaccc
       61 gaaacttaaa acaagcgaaa ccgaacgaac cggattccca ctttcgtggg aatgacggga
      121 tgcaggtttc cgtatggatg gattcgtcat tcccgcgcag gcgggaatct aggtctgtca
      181 gtgcggaaac ttatcaggta aaacggtttc ttgagatttt gcgtcctgga ttcccacttt
      241 cgtgggaatg acgcgattag agtttcaaaa tttattctaa atagctgaaa ctcaatgaac
      301 cggattcccg cctgcgcggg aatgacgaag tggaagttac ccgaaactta aaacaagcga
      361 aaccgaacga gccggattcc cgcttgcgcg ggaatgacgg gattaagttt tcaaaattca
      421 tcagaaatta ctgatttaat agcataaatt tttta
//
LOCUS       DAWGBY010000233          453 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.233, whole genome shotgun sequence.
ACCESSION   DAWGBY010000233 DAWGBY010000000
VERSION     DAWGBY010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.233"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
BASE COUNT          118 a           87 c          117 g          131 t
ORIGIN      
        1 ccgtgcggat ggattcgtca ttcccgcgca ggcgggaatc tagaccttag aacaacagca
       61 atattcaaag attatctgaa agtccgggat tctggatttc cactttcgta ggaatgacgt
      121 ggtgcaggtt tccgtacgga tggattcgtc attcccgcgc aggcgggaat ctagacctta
      181 gaacaacagc aatattcaaa ggttagctga agctttagag attctggatt cccactttcg
      241 tgggaatgac gggattttag gtttctgatt ttggttttct gtttttgtgg gaatgatgaa
      301 attttgagtt ttaggaattt accggaaaaa acagaaaccg ttctgtcgtc attcccgcgc
      361 aggcgggaat ccagaccttg ggataacagc aatattcaaa ggttagctga agctttagag
      421 attctagatt cccactttcg tgggaatgac gga
//
LOCUS       DAWGBY010000234          425 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.234, whole genome shotgun sequence.
ACCESSION   DAWGBY010000234 DAWGBY010000000
VERSION     DAWGBY010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.234"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            <1..>425
                     /locus_tag="WHG62_002080"
     CDS             <1..>425
                     /locus_tag="WHG62_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HEZ1726117.1"
                     /translation="YLFRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQ
                     SRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCKHHQITLHHSTIYRYLRQ
                     DKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIE"
BASE COUNT          136 a          150 c           84 g           55 t
ORIGIN      
        1 tacctgttcc gccactgcac cgtcaccgaa atcgccaaac agctgaaccg ccacaaaagc
       61 accatcagcc gcgaaatcag acggcaccgc acccaagggc agcaatacag cgccgaaaaa
      121 gcccagcggc aaagccggac tatcaaacag cgtaagcgac aaccctataa gctcgattcg
      181 cagctgattc agcacatcga cacccttatc cgccgcaaac tcagtcccga acaagtatgc
      241 gcctacctgt gcaaacacca ccagatcacg ctccaccaca gcaccattta ccgctacctt
      301 cgccaagaca aaagcaacgg cagcacgttg tggcaacatc tcagaatatg cagcaaaccc
      361 taccgcaaac gctacggcag cacatggacc agaggcaaag tccccaaccg tgtcggcata
      421 gaaaa
//
LOCUS       DAWGBY010000235          403 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.235, whole genome shotgun sequence.
ACCESSION   DAWGBY010000235 DAWGBY010000000
VERSION     DAWGBY010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.235"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            complement(<1..>403)
                     /locus_tag="WHG62_002081"
     CDS             complement(<1..>403)
                     /locus_tag="WHG62_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ1726118.1"
                     /translation="ITDKVVALLKANGVPAALVDMGEIRGFDTNGKRTWNVGIRNLDD
                     EEGVLANITMKDKAFATSGGYGTVMDKAGRFTHLFDPRTGAGTPRYKSMSVMADDAAV
                     ADALSTAFSIMDLPLIRSVAESRRLKVWLVMP"
BASE COUNT           90 a          137 c           89 g           87 t
ORIGIN      
        1 ccggcatgac cagccaaacc ttaagccgcc tgctttcggc aaccgaccgt atcaagggca
       61 aatccataat ggaaaacgcc gtcgacaagg catcggcaac cgccgcatca tccgccatca
      121 cgctcatgct tttataacgc ggcgtacccg cgccggtccg cggatcgaac aaatgggtaa
      181 acctgcccgc cttgtccatc accgtcccat agccgcccga agtggcaaac gccttgtctt
      241 tcatcgtgat atttgccaac acgccttctt cgtcgtccag attgcggatg ccgacattcc
      301 aagtccgttt accgtttgta tcaaatcccc tgatttcgcc catatcgacc agcgcggcag
      361 gcacgccgtt tgctttaagc agcgcaacaa ccttgtccgt gat
//
LOCUS       DAWGBY010000236          401 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NM0000000122
            SAMN37609381-rid19665133.denovo.236, whole genome shotgun sequence.
ACCESSION   DAWGBY010000236 DAWGBY010000000
VERSION     DAWGBY010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37609381
            Sequence Read Archive: SRR26269684
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-OCT-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001923585.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001923585.1
            Genome Coverage       :: 78x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 10/11/2023 17:24:40
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,082
            CDSs (total)                      :: 2,030
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 48 of 105
            Pseudo Genes (incomplete)         :: 53 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 7 of 105
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37609381-rid19665133.denovo.236"
                     /isolate="NM0000000122"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA: NY, New York City"
                     /lat_lon="40.71 N 74.01 W"
                     /collection_date="2023"
                     /collected_by="NYC DOHMH PHL"
     gene            108..323
                     /gene="rpmE"
                     /locus_tag="WHG62_002082"
     CDS             108..323
                     /gene="rpmE"
                     /locus_tag="WHG62_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEZ1726119.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT          123 a          104 c           74 g          100 t
ORIGIN      
        1 attttatcga atatcctctt gacgaaacaa cagaaaatag cgagaatgcc gagcttgtct
       61 gtagcatagg tacattccct atgcccgctt ttttgaaagg aaatcaaatg aaacaaggta
      121 ttcacccgaa ctaccacgaa gtcaacgtta cctgctcttg cggcaacaaa ttcgcaacca
      181 aatccgcgat ggaaaaagaa aacttcaata tcgaggtttg ctccctgtgc cacccgttct
      241 ataccggcac ccaaaaaatc gtcgatacca ccggccgcgt ggacaaattc aacaacaaat
      301 tcggcaacct gttcaaacgc tgattgccgc tttgcaagaa ttaagccctg ccatcatttc
      361 gatggcaggg ctttttaata tttggcacac tgacttctta t
//
